Psyllid ID: psy15318

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560------
MVFDACLKYNGAADMDNGMSYSNSYANNNTDSFSPDSPYFPFIMPPGRTVPPASIKRKRESIEPPENSDVDGAHGWYDEFGQASSPRFVSHKPNPSSIYTDPYYINNTGGGPGDPWAGGGPIQSPSPYADYSSPPEHAISTSNHLSQNLYPPSTLHLPPENMGYMSPSGGPADSSNISSITASPLPPMSTIRNPAAASGVQSPSLYPGHNSPIVQTTGPGPGDTVGKALASIYPADQSASSYSSNPSTPVSSPPPLSAQNSEWVSGPHASSPHFTSDHRGLHMSIPEQQRLDEAIGYLRSHTEGMEECLDDAINVIRNHADGQLNLPGLSHPSPGGSLLYHQHLGNSHAVSSTVGAIPAGYLAGLASSSDTDGHIKIENIANSSKKRKELTIDTKTESICSDQMNSVTSPTNSTSNKGSKRSRRYCSSADEDSEDPQTKAMREKERRQANNVRERIRIRDINEALKELGRMCMAHLKTDKPQTKLGILNMAVEVIMSLEQQVRERNLNPKAACLRRREEEKAEDSVGPKLGHHLSAVSQHMGIQPPSFPSMAPNAQGLMPQHDGPQ
ccHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccc
cccHHHEHEccccEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccHHcccHHHHHHHHHHHHHHHHcccccccccccHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccc
MVFDACLKyngaadmdngmsysnsyannntdsfspdspyfpfimppgrtvppasikrkresieppensdvdgahgwydefgqassprfvshkpnpssiytdpyyinntgggpgdpwagggpiqspspyadyssppehaistsnhlsqnlyppstlhlppenmgymspsggpadssnissitasplppmstirnpaaasgvqspslypghnspivqttgpgpgdtVGKALASiypadqsassyssnpstpvssppplsaqnsewvsgphassphftsdhrglhmsipeqqRLDEAIGYLRSHTEGMEECLDDAINVIRNhadgqlnlpglshpspggsllyhqhlgnshavsstvgaipagylaglasssdtdghikIENIANSSKKRKELTIDTKTESicsdqmnsvtsptnstsnkgskrsrrycssadedsedpqTKAMREKERRQANNVRERIRIRDINEALKELGRMCMAHlktdkpqtklGILNMAVEVIMSLEQQVRERNLNPKAACLRRreeekaedsvgpklghHLSAVsqhmgiqppsfpsmapnaqglmpqhdgpq
MVFDACLKYNGAADMDNGMSYSNSYANNNTDSFSPDSPYFPFIMPPGRTVPPASIKRKRESIEPPENSDVDGAHGWYDEFGQASSPRFVSHKPNPSSIYTDPYYINNTGGGPGDPWAGGGPIQSPSPYADYSSPPEHAISTSNHLSQNLYPPSTLHLPPENMGYMSPSGGPADSSNISSITASPLPPMSTIRNPAAASGVQSPSLYPGHNSPIVQTTGPGPGDTVGKALASIYPADQSASSYSSNPSTPVSSPPPLSAQNSEWVSGPHASSPHFTSDHRGLHMSIPEQQRLDEAIGYLRSHTEGMEECLDDAINVIRNHADGQLNLPGLSHPSPGGSLLYHQHLGNSHAVSSTVGAIPAGYLAGLasssdtdgHIKIeniansskkrkelTIDTKtesicsdqmnsvtsptnstsnkgskrsrrycssadedsedpqtkamrekerrqannvreririrDINEALKELGRMCMAHlktdkpqtkLGILNMAVEVIMSLEqqvrernlnpkaaclrrreeekaedsvgpkLGHHLSAVSQHMGIQPPSFPSMAPNAQGLMPQHDGPQ
MVFDACLKYNGAADMDNGMSYSNSYANNNTDSFSPDSPYFPFIMPPGRTVPPASIKRKRESIEPPENSDVDGAHGWYDEFGQASSPRFVSHKPNPSSIYTDPYYINNTgggpgdpwagggpIQspspyadyssppEHAISTSNHLSQNLYPPSTLHLPPENMGYMSPSGGPADSSNISSITASPLPPMSTIRNPAAASGVQSPSLYPGHNSPIVQTTGPGPGDTVGKALASIYPADQsassyssnpstpvssppplsAQNSEWVSGPHASSPHFTSDHRGLHMSIPEQQRLDEAIGYLRSHTEGMEECLDDAINVIRNHADGQLNLPGLSHPSPGGSLLYHQHLGNSHAVSSTVGAIPAGYLAGLASSSDTDGHIKIENIANSSKKRKELTIDTKTESICSDQMnsvtsptnstsnKGSKRSRRYCSSADEDSEDPQTKAMREKERRQANNVRERIRIRDINEALKELGRMCMAHLKTDKPQTKLGILNMAVEVIMSLEQQVRERNLNPKAACLRRREEEKAEDSVGPKLGHHLSAVSQHMGIQPPSFPSMAPNAQGLMPQHDGPQ
*****CLKY******************************************************************WY********************IYTDPYYINN******************************************************************************************************************************************************************************************AIGYLRSHTEGMEECLDDAINVIRNHADGQLN************LLYHQHLGNSHAVSSTVGAIPAGYLAGL******************************************************************************************IRIRDINEALKELGRMCMAHLKTDKPQTKLGILNMAVEVIMSLE*******************************************************************
*VFDAC*KY*****************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************RDINEALKELGRMCMA*****KPQTKLGILNMAVEVIMSLEQQV****************************************************************
MVFDACLKYNGAADMDNGMSYSNSYANNNTDSFSPDSPYFPFIMPPGRTVPPASIKRKRESIEPPENSDVDGAHGWYDEFGQASSPRFVSHKPNPSSIYTDPYYINNTGGGPGDPWAGGGPIQSPSPYADYSSPPEHAISTSNHLSQNLYPPSTLHLPPENMGYMSPSGGPADSSNISSITASPLPPMSTIRNPAAASGVQSPSLYPGHNSPIVQTTGPGPGDTVGKALASIYPA*****************************************DHRGLHMSIPEQQRLDEAIGYLRSHTEGMEECLDDAINVIRNHADGQLNLPGLSHPSPGGSLLYHQHLGNSHAVSSTVGAIPAGYLAGLASSSDTDGHIKIENIANSSKKRKELTIDTKTESICSDQ***********************************************NVRERIRIRDINEALKELGRMCMAHLKTDKPQTKLGILNMAVEVIMSLEQQVRERNLNPKAACLR************PKLGHHLSAVSQHMGIQPPSFPSMAPNAQGLMPQHDGPQ
MVFDACLKYNGAADMDNGMSY*NSYANNNTDSFSPDSPYFP***PPG************************GAHGWYDEFGQASSPRFVSHKPNPSSIYTDPYYINNTGGGPGDPWAGGGPIQSPSPYADYSSPPEHAISTSNHLSQNLYPPSTLHLPPENMGYMSPSGGPADSSNISSITASPLPPMSTIRN**A*SGVQSPS****************PGDTVGKALASIYP*********************************************GLHMSIPEQQRLDEAIGYLRSHTEGMEECLDDAINVIRNHADGQLNLPGLSHPSPGGSLLYHQHLGNSHAVSSTV*******************************************************************************EDP*TKAMREKER**ANNVRERIRIRDINEALKELGRMCMAHLKTDKPQTKLGILNMAVEVIMSLEQQVRERNLNPKAACLRRREE***********************************************
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MVFDACLKYNGAADMDNGMSYSNSYANNNTDSFSPDSPYFPFIMPPGRTVPPASIKRKRESIEPPENSDVDGAHGWYDEFGQASSPRFVSHKPNPSSIYTDPYYINNTGGGPGDPWAGGGPIQSPSPYADYSSPPEHAISTSNHLSQNLYPPSTLHLPPENMGYMSPSGGPADSSNISSITASPLPPMSTIRNPAAASGVQSPSLYPGHNSPIVQTTGPGPGDTVGKALASIYPADQSASSYSSNPSTPVSSPPPLSAQNSEWVSGPHASSPHFTSDHRGLHMSIPEQQRLDEAIGYLRSHTEGMEECLDDAINVIRNHADGQLNLPGLSHPSPGGSLLYHQHLGNSHAVSSTVGAIPAGYLAGLASSSDTDGHIKIENIANSSKKRKELTIDTKTESICSDQMNSVTSPTNSTSNKGSKRSRRYCSSADEDSEDPQTKAMREKERRQANNVRERIRIRDINEALKELGRMCMAHLKTDKPQTKLGILNMAVEVIMSLEQQVRERNLNPKAACLRRREEEKAEDSVGPKLGHHLSAVSQHMGIQPPSFPSMAPNAQGLMPQHDGPQ
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query566 2.2.26 [Sep-21-2011]
P11420710 Protein daughterless OS=D yes N/A 0.528 0.421 0.451 1e-61
P51514707 Transcription factor 12 O yes N/A 0.572 0.458 0.409 5e-56
Q60420437 Transcription factor 12 ( N/A N/A 0.570 0.739 0.409 1e-54
P30985657 Transcription factor 12 ( yes N/A 0.572 0.493 0.424 3e-54
Q61286706 Transcription factor 12 O yes N/A 0.586 0.470 0.398 2e-53
Q99081682 Transcription factor 12 O yes N/A 0.540 0.448 0.409 9e-52
P21677649 Transcription factor E2-a no N/A 0.570 0.497 0.418 1e-50
P15806651 Transcription factor E2-a no N/A 0.531 0.462 0.428 2e-49
Q62655589 Transcription factor 4 OS no N/A 0.602 0.578 0.369 4e-49
Q01978658 Transcription factor E2-a N/A N/A 0.689 0.592 0.359 5e-49
>sp|P11420|DA_DROME Protein daughterless OS=Drosophila melanogaster GN=da PE=1 SV=1 Back     alignment and function desciption
 Score =  238 bits (606), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 172/381 (45%), Positives = 208/381 (54%), Gaps = 82/381 (21%)

Query: 234 PADQSASSYSSNPSTPVSSPPPLSAQNSEWVSGPHASSPHFTSDHRGLHMSI---PEQQR 290
           PADQS SS+ SNPSTPV+SPPPL+      V G     P  +      H  +   P    
Sbjct: 291 PADQSISSFGSNPSTPVNSPPPLT---QSVVGG--GGEPSVSGGSGWGHSVLNGGPSSSY 345

Query: 291 LDEAIGYLRSHTEG-------MEECLDDAINVIRNHADGQL------------NLPGLSH 331
             E +     HT         MEE LDDA+NV+RNH + ++            N+  L+ 
Sbjct: 346 ASEMVPVSSLHTMASVFQGVRMEERLDDALNVLRNHCEPEMLAGVNQSLASIDNIDALTS 405

Query: 332 PSPG------------------GSLLYHQHLGNSHAVSSTVGAIPAGYLAGLASSSDTDG 373
             P                    + L H+ L    A ++       G    LAS      
Sbjct: 406 FVPNSPSHLGSGGNSGSVSNTSNAALVHEVLALGAAAAAGTSGQSVGGAGSLAS------ 459

Query: 374 HIKIENIANSS-----KKRKELTIDTK--------TESICSDQMNSVTSPTNS------- 413
            +K++  A++S     KKRKE T  +         T S+ S  + S T PT+S       
Sbjct: 460 -LKLDRSASTSLPKQTKKRKEHTAISNSVPAGVSTTSSLTSLDI-SDTKPTSSIESSNSG 517

Query: 414 ----TSNKGSKRSRRYCSSADEDSE-DPQTKAMREKERRQANNVRERIRIRDINEALKEL 468
               +  KG+KR RRYCSSADED + +P  KA+REKERRQANN RERIRIRDINEALKEL
Sbjct: 518 LQQHSQGKGTKRPRRYCSSADEDDDAEPAVKAIREKERRQANNARERIRIRDINEALKEL 577

Query: 469 GRMCMAHLKTDKPQTKLGILNMAVEVIMSLEQQVRERNLNPKAACLRRREEEKAEDSVGP 528
           GRMCM HLK+DKPQTKLGILNMAVEVIM+LEQQVRERNLNPKAACL+RREEEKAED  GP
Sbjct: 578 GRMCMTHLKSDKPQTKLGILNMAVEVIMTLEQQVRERNLNPKAACLKRREEEKAED--GP 635

Query: 529 KLG--HHLSAVSQHMGIQPPS 547
           KL   HH+    Q +G  P S
Sbjct: 636 KLSAQHHMIPQPQQVGGTPGS 656
Daughterless/Achaete-scute complex heterodimers act as transcriptional activators of neural cell fates and are involved in sex determination.
Drosophila melanogaster (taxid: 7227)
>sp|P51514|HTF4_RAT Transcription factor 12 OS=Rattus norvegicus GN=Tcf12 PE=2 SV=1 Back     alignment and function description
>sp|Q60420|HTF4_MESAU Transcription factor 12 (Fragment) OS=Mesocricetus auratus GN=TCF12 PE=2 SV=2 Back     alignment and function description
>sp|P30985|HTF4_CHICK Transcription factor 12 (Fragment) OS=Gallus gallus GN=TCF12 PE=2 SV=2 Back     alignment and function description
>sp|Q61286|HTF4_MOUSE Transcription factor 12 OS=Mus musculus GN=Tcf12 PE=1 SV=2 Back     alignment and function description
>sp|Q99081|HTF4_HUMAN Transcription factor 12 OS=Homo sapiens GN=TCF12 PE=1 SV=1 Back     alignment and function description
>sp|P21677|TFE2_RAT Transcription factor E2-alpha OS=Rattus norvegicus GN=Tcf3 PE=1 SV=1 Back     alignment and function description
>sp|P15806|TFE2_MOUSE Transcription factor E2-alpha OS=Mus musculus GN=Tcf3 PE=1 SV=2 Back     alignment and function description
>sp|Q62655|ITF2_RAT Transcription factor 4 OS=Rattus norvegicus GN=Tcf4 PE=2 SV=2 Back     alignment and function description
>sp|Q01978|TFE2_XENLA Transcription factor E2-alpha OS=Xenopus laevis GN=tcf3 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query566
340724133665 PREDICTED: transcription factor 12-like 0.823 0.700 0.473 1e-94
328723674536 PREDICTED: protein daughterless-like iso 0.455 0.481 0.677 1e-91
332031390559 Protein daughterless [Acromyrmex echinat 0.775 0.785 0.495 2e-89
328786099 706 PREDICTED: hypothetical protein LOC41055 0.802 0.643 0.453 4e-88
328723678494 PREDICTED: protein daughterless-like iso 0.461 0.528 0.592 2e-87
307189262531 Protein daughterless [Camponotus florida 0.727 0.775 0.487 3e-86
328723676434 PREDICTED: protein daughterless-like iso 0.418 0.546 0.647 1e-83
242015271558 protein daughterless, putative [Pediculu 0.754 0.765 0.443 5e-83
383854834 685 PREDICTED: transcription factor 12-like 0.731 0.604 0.479 1e-82
322797569497 hypothetical protein SINV_14891 [Solenop 0.639 0.728 0.48 4e-73
>gi|340724133|ref|XP_003400439.1| PREDICTED: transcription factor 12-like [Bombus terrestris] Back     alignment and taxonomy information
 Score =  353 bits (906), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 268/566 (47%), Positives = 331/566 (58%), Gaps = 100/566 (17%)

Query: 32  SFSPDSPYFPFIMPPGRTVPP-----------------------------ASIKRKRESI 62
           ++ PDSPYFPF     R VPP                             A++KRK++++
Sbjct: 93  TYPPDSPYFPFG---SRGVPPSVGTPTPAANPAAPTGSNGARLPNSTAGAAAVKRKKDAL 149

Query: 63  EPPENSDVDGAHGWY--DEFGQASSPRFVSHKPNPSSIYTDPYYIN-NTGGGPGDPWAGG 119
           +  +   V   H WY  DEFGQ  SPR+ S  P  +++Y DPYYI+ N  G        G
Sbjct: 150 DGADGEVVTTQH-WYGSDEFGQ-DSPRYTS--PKAAALYADPYYIDGNAAGTGPGDPWTG 205

Query: 120 GPIQSPSPYADYSSPPEHAISTSNHLSQNLYPPSTLHLPPENMGY--MSPSGGPADSSNI 177
           G      PY+ Y+ P         HL+Q  YP   +HLP + M Y  MSP+G PA     
Sbjct: 206 GGGGVQPPYSGYAPP---------HLAQPAYP---MHLPHDPMAYSAMSPNGEPAAPILG 253

Query: 178 SSIT-ASPLPPMSTIRNPAAA-----SGVQSPSLYPGHNSPIVQTTG------------- 218
           S++T A+ LPPMST R   A      +G  SP+     +SP   TT              
Sbjct: 254 SAVTSAASLPPMSTFRGSGAVAANSGTGAPSPASLQYSHSPGAPTTAPSAPNSAPTTNRQ 313

Query: 219 PGPGDTVGKALASIYPADQSASSYSSNPSTPVSSPPPLSAQNSEWVSGPHASSPHFTSD- 277
           P  GD +G ++ SI P +QS SSYSSNPSTPVSSPPPL+     WV G    SPHFT+D 
Sbjct: 314 PATGDNLGISI-SINPTNQSVSSYSSNPSTPVSSPPPLTGSAPGWVPGAAPVSPHFTADP 372

Query: 278 HRG-LHMSIPEQQRLDEAIGYLRSHTE-----GMEECLDDAINVIRNHADGQLNLPGLSH 331
           +RG +HM  PEQQRLD+AIG+LR H E      MEE LDDAINV+RNHA+ QL L  L  
Sbjct: 373 NRGTIHMPAPEQQRLDDAIGFLRDHAELVQGTRMEERLDDAINVLRNHAESQLGL-HLGP 431

Query: 332 PSPGGSLLYH------QHLGNSH-AVSSTVGAIPAGYLAGLASSSDTDGHIKIENIANSS 384
            +P GS+  H       HL + H AV+ T    P G  +GL  + DTDG IKIE +  ++
Sbjct: 432 VAPHGSIYSHTSPPQLDHLTSPHPAVTVTQ---PQGSYSGLTPTPDTDGSIKIERLPVTN 488

Query: 385 ------KKRKELTIDTKTESICSDQMNSVTSPTNSTSNKGSKRSRRYCSSADEDSEDPQT 438
                 +KRK+    +  E+  S    +     +++  KG+KRSRRY   A+++ +DP  
Sbjct: 489 AKYVSLEKRKDPPDSSGGETKPSSSELAAAGVISTSQGKGTKRSRRY---AEDEDDDPDV 545

Query: 439 KAMREKERRQANNVRERIRIRDINEALKELGRMCMAHLKTDKPQTKLGILNMAVEVIMSL 498
           KA REKERRQANN RERIRIRDINEALKELGRMCM HLKTDKPQTKLGILNMAVEVIM+L
Sbjct: 546 KAQREKERRQANNARERIRIRDINEALKELGRMCMTHLKTDKPQTKLGILNMAVEVIMTL 605

Query: 499 EQQVRERNLNPKAACLRRREEEKAED 524
           EQQVRERNLNPKAACL+RREEEKAED
Sbjct: 606 EQQVRERNLNPKAACLKRREEEKAED 631

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota
>gi|328723674|ref|XP_001950085.2| PREDICTED: protein daughterless-like isoform 1 [Acyrthosiphon pisum] Back     alignment and taxonomy information
>gi|332031390|gb|EGI70903.1| Protein daughterless [Acromyrmex echinatior] Back     alignment and taxonomy information
>gi|328786099|ref|XP_394032.4| PREDICTED: hypothetical protein LOC410553 [Apis mellifera] Back     alignment and taxonomy information
>gi|328723678|ref|XP_003247915.1| PREDICTED: protein daughterless-like isoform 3 [Acyrthosiphon pisum] Back     alignment and taxonomy information
>gi|307189262|gb|EFN73705.1| Protein daughterless [Camponotus floridanus] Back     alignment and taxonomy information
>gi|328723676|ref|XP_003247914.1| PREDICTED: protein daughterless-like isoform 2 [Acyrthosiphon pisum] Back     alignment and taxonomy information
>gi|242015271|ref|XP_002428289.1| protein daughterless, putative [Pediculus humanus corporis] gi|212512873|gb|EEB15551.1| protein daughterless, putative [Pediculus humanus corporis] Back     alignment and taxonomy information
>gi|383854834|ref|XP_003702925.1| PREDICTED: transcription factor 12-like [Megachile rotundata] Back     alignment and taxonomy information
>gi|322797569|gb|EFZ19613.1| hypothetical protein SINV_14891 [Solenopsis invicta] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query566
FB|FBgn0000413710 da "daughterless" [Drosophila 0.247 0.197 0.748 1.5e-59
UNIPROTKB|J9PAE9501 TCF4 "Transcription factor 4" 0.203 0.229 0.644 1.5e-51
UNIPROTKB|F1MXB9511 TCF4 "Uncharacterized protein" 0.219 0.242 0.623 1.7e-51
MGI|MGI:98510651 Tcf3 "transcription factor 3" 0.623 0.542 0.376 2.4e-50
UNIPROTKB|P15923654 TCF3 "Transcription factor E2- 0.643 0.556 0.375 4e-50
UNIPROTKB|P30985657 TCF12 "Transcription factor 12 0.300 0.258 0.513 4.8e-50
RGD|620914649 Tcf3 "transcription factor 3" 0.574 0.500 0.384 8.1e-50
UNIPROTKB|F1LRL7649 Tcf3 "Transcription factor E2- 0.574 0.500 0.384 1e-49
UNIPROTKB|P98180649 TCF3 "Transcription factor E2- 0.575 0.502 0.385 1.7e-49
UNIPROTKB|F1NVE3517 F1NVE3 "Uncharacterized protei 0.219 0.239 0.602 2.5e-49
FB|FBgn0000413 da "daughterless" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 515 (186.3 bits), Expect = 1.5e-59, Sum P(3) = 1.5e-59
 Identities = 110/147 (74%), Positives = 120/147 (81%)

Query:   417 KGSKRSRRYCSSADEDSE-DPQTKAMREKERRQANNVRERIRIRDINEALKELGRMCMAH 475
             KG+KR RRYCSSADED + +P  KA+REKERRQANN RERIRIRDINEALKELGRMCM H
Sbjct:   525 KGTKRPRRYCSSADEDDDAEPAVKAIREKERRQANNARERIRIRDINEALKELGRMCMTH 584

Query:   476 LKTDKPQTKLGILNMAVEVIMSLEQQVRERNLNPKAACLRRREEEKAEDSVGPKLG--HH 533
             LK+DKPQTKLGILNMAVEVIM+LEQQVRERNLNPKAACL+RREEEKAED  GPKL   HH
Sbjct:   585 LKSDKPQTKLGILNMAVEVIMTLEQQVRERNLNPKAACLKRREEEKAED--GPKLSAQHH 642

Query:   534 LSAVSQHMGIQPPSFPSMAPNAQGLMP 560
             +    Q +G  P S     P AQ L+P
Sbjct:   643 MIPQPQQVGGTPGSSYHSQP-AQ-LVP 667
GO:0042803 "protein homodimerization activity" evidence=IPI
GO:0046982 "protein heterodimerization activity" evidence=IPI
GO:0043565 "sequence-specific DNA binding" evidence=IDA
GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS;NAS;IDA
GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IDA;TAS
GO:0005667 "transcription factor complex" evidence=IPI
GO:0007399 "nervous system development" evidence=NAS;TAS
GO:0007530 "sex determination" evidence=NAS;TAS
GO:0003677 "DNA binding" evidence=TAS
GO:0005634 "nucleus" evidence=ISS;NAS;IDA
GO:0000977 "RNA polymerase II regulatory region sequence-specific DNA binding" evidence=IPI
GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IMP
GO:0061382 "Malpighian tubule tip cell differentiation" evidence=IMP
GO:0001077 "RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription" evidence=IDA;IPI
GO:0007422 "peripheral nervous system development" evidence=NAS;TAS
GO:0006355 "regulation of transcription, DNA-dependent" evidence=ISS
GO:0007541 "sex determination, primary response to X:A ratio" evidence=TAS
GO:0001012 "RNA polymerase II regulatory region DNA binding" evidence=IPI
GO:0030707 "ovarian follicle cell development" evidence=TAS
GO:0016330 "second mitotic wave involved in compound eye morphogenesis" evidence=TAS
GO:0045464 "R8 cell fate specification" evidence=NAS
GO:0048477 "oogenesis" evidence=IMP;TAS
GO:0008134 "transcription factor binding" evidence=IGI
GO:0000981 "sequence-specific DNA binding RNA polymerase II transcription factor activity" evidence=IPI
GO:0008407 "chaeta morphogenesis" evidence=IMP
GO:0007423 "sensory organ development" evidence=IGI;IMP
GO:0006974 "response to DNA damage stimulus" evidence=IMP
GO:0035019 "somatic stem cell maintenance" evidence=IMP
GO:0022008 "neurogenesis" evidence=IMP
GO:0061101 "neuroendocrine cell differentiation" evidence=IMP
GO:0048663 "neuron fate commitment" evidence=IMP
UNIPROTKB|J9PAE9 TCF4 "Transcription factor 4" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|F1MXB9 TCF4 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
MGI|MGI:98510 Tcf3 "transcription factor 3" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|P15923 TCF3 "Transcription factor E2-alpha" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|P30985 TCF12 "Transcription factor 12" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
RGD|620914 Tcf3 "transcription factor 3" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|F1LRL7 Tcf3 "Transcription factor E2-alpha" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|P98180 TCF3 "Transcription factor E2-alpha" [Mesocricetus auratus (taxid:10036)] Back     alignment and assigned GO terms
UNIPROTKB|F1NVE3 F1NVE3 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query566
smart0035353 smart00353, HLH, helix loop helix domain 5e-13
cd0008360 cd00083, HLH, Helix-loop-helix domain, found in sp 4e-12
pfam0001052 pfam00010, HLH, Helix-loop-helix DNA-binding domai 9e-12
>gnl|CDD|197674 smart00353, HLH, helix loop helix domain Back     alignment and domain information 
 Score = 63.4 bits (155), Expect = 5e-13
 Identities = 22/54 (40%), Positives = 32/54 (59%), Gaps = 1/54 (1%)

Query: 451 NVRERIRIRDINEALKELGRMCMAHLKTDKPQTKLGILNMAVEVIMSLEQQVRE 504
           N RER R R INEA  EL  +     K  K  +K  IL +A+E I SL++++++
Sbjct: 1   NARERRRRRKINEAFDELRSLLPTLPKNKKL-SKAEILRLAIEYIKSLQEELQK 53

Length = 53
>gnl|CDD|238036 cd00083, HLH, Helix-loop-helix domain, found in specific DNA- binding proteins that act as transcription factors; 60-100 amino acids long Back     alignment and domain information
>gnl|CDD|215654 pfam00010, HLH, Helix-loop-helix DNA-binding domain Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 566
KOG3910|consensus632 100.0
KOG4029|consensus228 99.61
KOG3960|consensus284 99.59
KOG3898|consensus254 99.53
KOG4395|consensus285 99.33
PF0001055 HLH: Helix-loop-helix DNA-binding domain only nucl 99.26
cd0008360 HLH Helix-loop-helix domain, found in specific DNA 99.19
smart0035353 HLH helix loop helix domain. 99.12
KOG4447|consensus173 99.09
KOG0561|consensus 373 98.9
KOG1319|consensus229 97.84
KOG1318|consensus411 97.77
KOG2483|consensus232 96.58
KOG3561|consensus 803 96.37
KOG4447|consensus173 95.73
KOG4304|consensus250 95.46
KOG2588|consensus 953 93.03
>KOG3910|consensus Back     alignment and domain information 
Probab=100.00  E-value=1e-114  Score=907.74  Aligned_cols=456  Identities=39%  Similarity=0.566  Sum_probs=363.6

Q ss_pred             CcccccCCCCCCCCCCCCC----CCCCcCCC-CCCCCCCCCccc--ccccccCCCCCCCCcCCCCCCccccCCCCCCCCC
Q psy15318         17 NGMSYSNSYANNNTDSFSP----DSPYFPFI-MPPGRTVPPASI--KRKRESIEPPENSDVDGAHGWYDEFGQASSPRFV   89 (566)
Q Consensus        17 ~~~~~~~~~~~~sp~~lSp----~Sqyy~~~-~nprRr~~~~~~--kk~r~kvppglpSsVy~ps~s~ddf~r~Ds~~Yp   89 (566)
                      -|.+|.+++++++|++|||    ++|||+|. +++|||+.+.++  .||+||||||||++||.|+  ++||+| |+++||
T Consensus        93 ~g~~l~g~~a~~npgpLS~~gk~~sqyy~~~~g~~rrr~~~g~~~q~kkvrkVppGLPsSvy~Ps--s~d~~r-~~~~yp  169 (632)
T KOG3910|consen   93 SGCLLMGDLALGNPGPLSPSGKPGSQYYHQSSGSSRRRPLHGALDQDKKVRKVPPGLPSSVYAPS--SQDYGR-DSPAYP  169 (632)
T ss_pred             ccccccchhccCCCCCcCCCCCCCceeeeccCCCccCCCCcccccCCCccccCCCCCcccccCCC--ccccCC-CCcCcc
Confidence            3448999999999999997    79999886 688999999877  4555599999999999985  899999 999999


Q ss_pred             CCCCCCCCCCCCCccccCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy15318         90 SHKPNPSSIYTDPYYINNTGGGPGDPWAGG-GPIQSPSPYADYSSPPEHAISTSNHLSQNLYPPSTLHLPPENMGYMSPS  168 (566)
Q Consensus        90 SpK~p~ss~yp~~Fym~g~~~~s~DpWs~s-G~~q~~sgy~~ms~p~~~l~~~sshl~q~~y~~~~lh~~herm~Y~~hs  168 (566)
                      ++|++ +.+||+.|||..++|++.|+|+++ +|.|+  +|++|      +++.++||+|++ +|+.+| +|+||.|++|+
T Consensus       170 a~k~p-~v~~Pa~f~~pdg~H~ss~~~s~s~~~~q~--~~gg~------lln~tphm~~ss-~~~~lh-~h~r~~yp~H~  238 (632)
T KOG3910|consen  170 APKPP-TVMFPAAFFMPDGHHNSSDLWSPSTGMMQP--GFGGM------LLNSTPHMPQSS-SYGTLH-PHERLSYPPHS  238 (632)
T ss_pred             CCCCC-cccCccccccccCcCccccccCCccccCCC--Ccccc------cCCCCCCCcccc-ccCccc-ccccccCCCCc
Confidence            99999 999999999965568899999988 67888  99999      667789999988 779999 99999999997


Q ss_pred             CCCCCCCCCccCCCCCCCCCcccCCCCCC--CCCCCCCCCCCCCCCCcCCCC--CCCCChhhccchhccCCCCCCCCCCC
Q psy15318        169 GGPADSSNISSITASPLPPMSTIRNPAAA--SGVQSPSLYPGHNSPIVQTTG--PGPGDTVGKALASIYPADQSASSYSS  244 (566)
Q Consensus       169 ~~~~~~~~~~~~~~~~LPPMSsF~~~~~~--~g~~s~~~~~g~~~~~~~~~~--s~tGDaLGKALASIYspDhssssFsS  244 (566)
                      ..         +||.+||||++|++.+++  +++.|-......++.++++++  ++|||++||||||||++|||+++|+|
T Consensus       239 s~---------~~n~~lpp~stfs~a~as~~~~ass~tppi~gtds~m~trgsagStgdapgkalasi~spdht~~~~~s  309 (632)
T KOG3910|consen  239 SA---------DINPSLPPMSTFSSAGASVVYSASSHTPPINGTDSIMGTRGSAGSTGDAPGKALASIYSPDHTSNSFSS  309 (632)
T ss_pred             cc---------ccCCCCCCccccccCCcccccccccCCCcccccccccccCCcccccCCCCCcccccccCCCccCCCCCC
Confidence            52         588899999999887665  333221100012244444443  36999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCcCCCCCCCC--CCCCCCCCCCCccccccchhhhhhhhhhhhhcccccchhhH---hHHHHHHHHhhc
Q psy15318        245 NPSTPVSSPPPLSAQNSEWVSG--PHASSPHFTSDHRGLHMSIPEQQRLDEAIGYLRSHTEGMEE---CLDDAINVIRNH  319 (566)
Q Consensus       245 nPSTPVgSP~pL~~~~sqW~r~--~~~~SP~ye~~~~~lh~l~~~q~~~~~a~~~l~~~~srmEd---rLDdAIhVLRnH  319 (566)
                      |||||||||++|++ ++||+|.  +...+|+||+   +||+|                 |+||||   ||||||||||||
T Consensus       310 ~pStpvgSp~~ltg-t~~~pr~g~a~~sspsy~~---slh~l-----------------qs~~Ed~~erLddAihvLrnh  368 (632)
T KOG3910|consen  310 NPSTPVGSPQPLTG-TSQWPRPGGAASSSPSYEG---SLHGL-----------------QSRIEDRLERLDDAIHVLRNH  368 (632)
T ss_pred             CCCCCCCCCCCccc-ccCCCCCCcccccCCCCCC---ccccc-----------------cccccchhhhhHHHHHHhhcc
Confidence            99999999999996 7999985  5566999999   78887                 678887   899999999999


Q ss_pred             cccC-CCCCCCCCCCCCCCccc-c--------------cCCCCCCccc-ccc--c--CCCCCc-----ccCCCCCC--CC
Q psy15318        320 ADGQ-LNLPGLSHPSPGGSLLY-H--------------QHLGNSHAVS-STV--G--AIPAGY-----LAGLASSS--DT  371 (566)
Q Consensus       320 AvG~-~~l~g~~h~~~~g~l~~-~--------------~~l~~~h~~~-~~~--~--~l~~~~-----~~~l~~~~--~~  371 (566)
                      |||+ +++++ +|.|||++|.+ |              +...++|..+ ++.  .  +|.+..     ...++++.  .+
T Consensus       369 av~p~~a~~~-~~~D~ht~~~PsH~g~~G~lgS~~~t~~~~~~r~~~lvGth~ed~~~lgG~~sL~~~~~~~psqs~t~P  447 (632)
T KOG3910|consen  369 AVGPSTAAPI-GHGDMHTLLGPSHNGYGGTLGSGYGTSLDASSRHALLVGTHPEDTVGLGGSTSLLSNNVQFPSQSGTSP  447 (632)
T ss_pred             ccCccccccc-ccccccccccccccccccccccCCCcchhhhhhhhhhhccCcCCccccCCccccccccccCCCcCCCCc
Confidence            9998 45665 78999988843 2              1112233321 111  0  232221     11222221  11


Q ss_pred             CCC-------cccccc----cccccccccccccccC-ccccccccCCCCCCCCCCCCCCCCCCcccCCCCCCCCCChHHH
Q psy15318        372 DGH-------IKIENI----ANSSKKRKELTIDTKT-ESICSDQMNSVTSPTNSTSNKGSKRSRRYCSSADEDSEDPQTK  439 (566)
Q Consensus       372 ~~~-------~~~~r~----~~~~~kree~~d~~~~-~~~ss~~~~~~~~~~~s~~~k~~K~~R~~~s~~~~~d~~p~~k  439 (566)
                      +++       ..+.+.    ...+||+++||++|+. ..+++++++        .+.|..|+.|++.+.++|||+.|++|
T Consensus       448 dl~k~~e~y~g~l~g~s~tssassik~ddke~~es~~~~~ss~~~k--------~qg~~~k~irt~sS~dedddl~peqk  519 (632)
T KOG3910|consen  448 DLNKPPEGYRGGLQGQSPTSSASSIKNDDKEPDESLSRSNSSEDRK--------SQGKPSKRIRTRSSSDEDDDLNPEQK  519 (632)
T ss_pred             ccCCCCCCCcccccCCCCccccceeeccccCcccccccCcchhhhh--------hcCCCCCCCCccCCcccccccChhhh
Confidence            111       112222    2458899997776654 344555433        23455778888777888899999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhccCCchhHhhhhhhh
Q psy15318        440 AMREKERRQANNVRERIRIRDINEALKELGRMCMAHLKTDKPQTKLGILNMAVEVIMSLEQQVRERNLNPKAACLRRREE  519 (566)
Q Consensus       440 ~~rek~RR~aaNaRER~Rmr~IN~AF~eLRr~~p~~~~~dKklSKieiLr~Ai~YI~~L~~~Lre~nlnpk~~clkrree  519 (566)
                      ++||||||+|||||||+|||||||||+||.|||++|++.||.+|||.||++||++|..|||||||||||||++|+|||||
T Consensus       520 aeREkERR~aNNARERlRVRDINeAfKELGRMCqlHlkSeKpQTKLgILhqAVsVIlsLEQQVRERNLNPKaaclkRRee  599 (632)
T KOG3910|consen  520 AEREKERRMANNARERLRVRDINEAFKELGRMCQLHLKSEKPQTKLGILHQAVSVILSLEQQVRERNLNPKAACLKRREE  599 (632)
T ss_pred             hhHHHHHHhhhhhhhheehhhHHHHHHHHHHHHHHhhcccCcchhhhHHHHHHHHHHHHHHHHHHccCChhhhhhhccch
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhccCC
Q psy15318        520 EKAEDS  525 (566)
Q Consensus       520 eK~~g~  525 (566)
                      ||++++
T Consensus       600 Ekvs~~  605 (632)
T KOG3910|consen  600 EKVSMV  605 (632)
T ss_pred             hhhccc
Confidence            999875

>KOG4029|consensus Back     alignment and domain information
>KOG3960|consensus Back     alignment and domain information
>KOG3898|consensus Back     alignment and domain information
>KOG4395|consensus Back     alignment and domain information
>PF00010 HLH: Helix-loop-helix DNA-binding domain only nuclear translocator protein (Arnt) Back     alignment and domain information
>cd00083 HLH Helix-loop-helix domain, found in specific DNA- binding proteins that act as transcription factors; 60-100 amino acids long Back     alignment and domain information
>smart00353 HLH helix loop helix domain Back     alignment and domain information
>KOG4447|consensus Back     alignment and domain information
>KOG0561|consensus Back     alignment and domain information
>KOG1319|consensus Back     alignment and domain information
>KOG1318|consensus Back     alignment and domain information
>KOG2483|consensus Back     alignment and domain information
>KOG3561|consensus Back     alignment and domain information
>KOG4447|consensus Back     alignment and domain information
>KOG4304|consensus Back     alignment and domain information
>KOG2588|consensus Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query566
2ql2_A60 Crystal Structure Of The Basic-Helix-Loop-Helix Dom 1e-20
3u5v_A76 Crystal Structure Of Max-E47 Length = 76 6e-19
>pdb|2QL2|A Chain A, Crystal Structure Of The Basic-Helix-Loop-Helix Domains Of The Heterodimer E47NEUROD1 BOUND TO DNA Length = 60 Back     alignment and structure 
Iteration: 1

 Score = 98.2 bits (243), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 44/60 (73%), Positives = 50/60 (83%)
Query: 446 RRQANNVRERIRIRDINEALKELGRMCMAHLKTDKPQTKLGILNMAVEVIMSLEQQVRER 505
           RR ANN RER+R+RDINEA +ELGRMC  HLK+DK QTKL IL  AV+VI+ LEQQVRER
Sbjct: 1   RRMANNARERVRVRDINEAFRELGRMCQLHLKSDKAQTKLLILQQAVQVILGLEQQVRER 60
>pdb|3U5V|A Chain A, Crystal Structure Of Max-E47 Length = 76 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query566
3u5v_A76 Protein MAX, transcription factor E2-alpha chimer; 6e-30
1mdy_A68 Protein (MYOD BHLH domain); protein-DNA complex, t 5e-10
2ql2_B60 Neurod1, neurogenic differentiation factor 1; basi 2e-09
1an4_A65 Protein (upstream stimulatory factor); protein-DNA 4e-07
3lvg_D190 LCB, clathrin light chain B; SELF assembly, coated 2e-06
1am9_A82 Srebp-1A, protein (sterol regulatory element bindi 3e-06
1nkp_B83 MAX protein, MYC proto-oncogene protein; transcrip 4e-06
1hlo_A80 Protein (transcription factor MAX); transcriptiona 4e-06
3h0g_A1752 DNA-directed RNA polymerase II subunit RPB1; trans 4e-06
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 4e-06
1nkp_A88 C-MYC, MYC proto-oncogene protein; transcription, 2e-05
1twf_A1733 B220, DNA-directed RNA polymerase II largest subun 6e-05
1twf_A1733 B220, DNA-directed RNA polymerase II largest subun 1e-04
1twf_A1733 B220, DNA-directed RNA polymerase II largest subun 2e-04
1nlw_A80 MAD protein, MAX dimerizer; transcription factor, 8e-04
>3u5v_A Protein MAX, transcription factor E2-alpha chimer; basic helix-loop-helix (BHLH); 1.70A {Mus musculus} PDB: 2ql2_A* Length = 76 Back     alignment and structure
 Score =  111 bits (279), Expect = 6e-30
 Identities = 44/69 (63%), Positives = 51/69 (73%)

Query: 445 ERRQANNVRERIRIRDINEALKELGRMCMAHLKTDKPQTKLGILNMAVEVIMSLEQQVRE 504
           ++R  +N  ER R RDINEA +ELGRMC  HLK+DK QTKL IL  AV+VI+ LEQQVRE
Sbjct: 4   DKRAHHNALERKRRRDINEAFRELGRMCQMHLKSDKAQTKLLILQQAVQVILGLEQQVRE 63

Query: 505 RNLNPKAAC 513
           RNLNP    
Sbjct: 64  RNLNPLNHH 72
>1mdy_A Protein (MYOD BHLH domain); protein-DNA complex, transcription/DNA complex; HET: DNA; 2.80A {Mus musculus} SCOP: a.38.1.1 PDB: 1mdy_B* Length = 68 Back     alignment and structure
>2ql2_B Neurod1, neurogenic differentiation factor 1; basic-helix-loop-helix; HET: DNA; 2.50A {Mus musculus} Length = 60 Back     alignment and structure
>1an4_A Protein (upstream stimulatory factor); protein-DNA complex, double helix, overhanging base, transcription/DNA complex; HET: DNA; 2.90A {Homo sapiens} SCOP: a.38.1.1 Length = 65 Back     alignment and structure
>3lvg_D LCB, clathrin light chain B; SELF assembly, coated PIT, cytoplasmic vesicle, membrane, Ca structural protein; 7.94A {Bos taurus} Length = 190 Back     alignment and structure
>1am9_A Srebp-1A, protein (sterol regulatory element binding protein 1A); basic-helix-loop- helix-leucine zipper, transcription factor; HET: DNA; 2.30A {Homo sapiens} SCOP: a.38.1.1 PDB: 1ukl_C Length = 82 Back     alignment and structure
>1nkp_B MAX protein, MYC proto-oncogene protein; transcription, DNA, BHLHZ, heterodimer, transcription/DNA complex; 1.80A {Homo sapiens} SCOP: a.38.1.1 PDB: 1an2_A* 1r05_A 1nlw_B Length = 83 Back     alignment and structure
>1hlo_A Protein (transcription factor MAX); transcriptional regulation, DNA binding, complex (transcription factor MAX/DNA), transcription/DNA complex; HET: DNA; 2.80A {Homo sapiens} SCOP: a.38.1.1 Length = 80 Back     alignment and structure
>3h0g_A DNA-directed RNA polymerase II subunit RPB1; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe} Length = 1752 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1nkp_A C-MYC, MYC proto-oncogene protein; transcription, DNA, BHLHZ, heterodimer, transcription/DNA complex; 1.80A {Homo sapiens} SCOP: a.38.1.1 Length = 88 Back     alignment and structure
>1twf_A B220, DNA-directed RNA polymerase II largest subunit; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: e.29.1.2 PDB: 1i3q_A 1i6h_A 1k83_A* 1nik_A 1nt9_A 1pqv_A 1r5u_A 1r9s_A* 1r9t_A* 1sfo_A* 1twa_A* 1twc_A* 1i50_A* 1twg_A* 1twh_A* 1wcm_A 1y1v_A 1y1w_A 1y1y_A 1y77_A* ... Length = 1733 Back     alignment and structure
>1twf_A B220, DNA-directed RNA polymerase II largest subunit; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: e.29.1.2 PDB: 1i3q_A 1i6h_A 1k83_A* 1nik_A 1nt9_A 1pqv_A 1r5u_A 1r9s_A* 1r9t_A* 1sfo_A* 1twa_A* 1twc_A* 1i50_A* 1twg_A* 1twh_A* 1wcm_A 1y1v_A 1y1w_A 1y1y_A 1y77_A* ... Length = 1733 Back     alignment and structure
>1twf_A B220, DNA-directed RNA polymerase II largest subunit; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: e.29.1.2 PDB: 1i3q_A 1i6h_A 1k83_A* 1nik_A 1nt9_A 1pqv_A 1r5u_A 1r9s_A* 1r9t_A* 1sfo_A* 1twa_A* 1twc_A* 1i50_A* 1twg_A* 1twh_A* 1wcm_A 1y1v_A 1y1w_A 1y1y_A 1y77_A* ... Length = 1733 Back     alignment and structure
>1nlw_A MAD protein, MAX dimerizer; transcription factor, DNA, BHLHZ, transcription/DNA complex; 2.00A {Homo sapiens} SCOP: a.38.1.1 Length = 80 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query566
2ql2_B60 Neurod1, neurogenic differentiation factor 1; basi 99.84
1mdy_A68 Protein (MYOD BHLH domain); protein-DNA complex, t 99.81
2lfh_A68 DNA-binding protein inhibitor ID-3; structural gen 99.72
3u5v_A76 Protein MAX, transcription factor E2-alpha chimer; 99.72
4aya_A97 DNA-binding protein inhibitor ID-2; cell cycle; 2. 99.71
1hlo_A80 Protein (transcription factor MAX); transcriptiona 99.45
1nkp_B83 MAX protein, MYC proto-oncogene protein; transcrip 99.34
1nkp_A88 C-MYC, MYC proto-oncogene protein; transcription, 99.34
1nlw_A80 MAD protein, MAX dimerizer; transcription factor, 99.17
1am9_A82 Srebp-1A, protein (sterol regulatory element bindi 99.15
1an4_A65 Protein (upstream stimulatory factor); protein-DNA 99.0
4h10_B71 Circadian locomoter output cycles protein kaput; B 98.93
4ati_A118 MITF, microphthalmia-associated transcription fact 98.87
4h10_A73 ARYL hydrocarbon receptor nuclear translocator-LI 98.87
1a0a_A63 BHLH, protein (phosphate system positive regulator 98.76
4f3l_A 361 Mclock, circadian locomoter output cycles protein 98.23
4f3l_B 387 BMAL1B; BHLH, PAS, circadian rhythm proteins, tran 97.93
4ath_A83 MITF, microphthalmia-associated transcription fact 97.19
3muj_A138 Transcription factor COE3; immunoglobulin like fol 89.08
>2ql2_B Neurod1, neurogenic differentiation factor 1; basic-helix-loop-helix; HET: DNA; 2.50A {Mus musculus} Back     alignment and structure
Probab=99.84  E-value=1.9e-21  Score=155.26  Aligned_cols=59  Identities=29%  Similarity=0.430  Sum_probs=56.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHh
Q psy15318        445 ERRQANNVRERIRIRDINEALKELGRMCMAHLKTDKPQTKLGILNMAVEVIMSLEQQVRE  504 (566)
Q Consensus       445 ~RR~aaNaRER~Rmr~IN~AF~eLRr~~p~~~~~dKklSKieiLr~Ai~YI~~L~~~Lre  504 (566)
                      .||+++|+|||.||++||+||++||++|| +++.++|||||+||++||+||.+|+++|++
T Consensus         1 ~rR~~~N~rER~R~~~iN~af~~LR~~lP-~~~~~~klSKi~tLr~Ai~YI~~L~~~L~~   59 (60)
T 2ql2_B            1 SRRMKANARERNRMHGLNAALDNLRKVVP-CYSKTQKLSKIETLRLAKNYIWALSEILRS   59 (60)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHTSS-SCCSSSCCCHHHHHHHHHHHHHHHHHHTTC
T ss_pred             CccchhhHHHHHHHHHHHHHHHHHHHHcc-CCCCcCcCCHHHHHHHHHHHHHHHHHHHhc
Confidence            38999999999999999999999999999 888999999999999999999999999853
>1mdy_A Protein (MYOD BHLH domain); protein-DNA complex, transcription/DNA complex; HET: DNA; 2.80A {Mus musculus} SCOP: a.38.1.1 PDB: 1mdy_B* Back     alignment and structure
>2lfh_A DNA-binding protein inhibitor ID-3; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Back     alignment and structure
>3u5v_A Protein MAX, transcription factor E2-alpha chimer; basic helix-loop-helix (BHLH); 1.70A {Mus musculus} PDB: 2ql2_A* Back     alignment and structure
>4aya_A DNA-binding protein inhibitor ID-2; cell cycle; 2.10A {Homo sapiens} Back     alignment and structure
>1hlo_A Protein (transcription factor MAX); transcriptional regulation, DNA binding, complex (transcription factor MAX/DNA), transcription/DNA complex; HET: DNA; 2.80A {Homo sapiens} SCOP: a.38.1.1 Back     alignment and structure
>1nkp_B MAX protein, MYC proto-oncogene protein; transcription, DNA, BHLHZ, heterodimer, transcription/DNA complex; 1.80A {Homo sapiens} SCOP: a.38.1.1 PDB: 1an2_A* 1r05_A 1nlw_B Back     alignment and structure
>1nkp_A C-MYC, MYC proto-oncogene protein; transcription, DNA, BHLHZ, heterodimer, transcription/DNA complex; 1.80A {Homo sapiens} SCOP: a.38.1.1 Back     alignment and structure
>1nlw_A MAD protein, MAX dimerizer; transcription factor, DNA, BHLHZ, transcription/DNA complex; 2.00A {Homo sapiens} SCOP: a.38.1.1 Back     alignment and structure
>1am9_A Srebp-1A, protein (sterol regulatory element binding protein 1A); basic-helix-loop- helix-leucine zipper, transcription factor; HET: DNA; 2.30A {Homo sapiens} SCOP: a.38.1.1 PDB: 1ukl_C Back     alignment and structure
>1an4_A Protein (upstream stimulatory factor); protein-DNA complex, double helix, overhanging base, transcription/DNA complex; HET: DNA; 2.90A {Homo sapiens} SCOP: a.38.1.1 Back     alignment and structure
>4h10_B Circadian locomoter output cycles protein kaput; BHLH, circadian transcription, transcription-DNA complex; 2.40A {Homo sapiens} Back     alignment and structure
>4ati_A MITF, microphthalmia-associated transcription factor; DNA-binding protein-DNA complex, melanoma; 2.60A {Mus musculus} PDB: 4atk_A Back     alignment and structure
>4h10_A ARYL hydrocarbon receptor nuclear translocator-LI 1; BHLH, circadian transcription, transcription-DNA complex; 2.40A {Homo sapiens} Back     alignment and structure
>1a0a_A BHLH, protein (phosphate system positive regulatory protein PHO4); transcription factor, basic helix loop helix; HET: DNA; 2.80A {Saccharomyces cerevisiae} SCOP: a.38.1.1 Back     alignment and structure
>4f3l_A Mclock, circadian locomoter output cycles protein kaput; BHLH, PAS, circadian rhythm proteins, transcription-activato; 2.27A {Mus musculus} Back     alignment and structure
>4f3l_B BMAL1B; BHLH, PAS, circadian rhythm proteins, transcription-activato; 2.27A {Mus musculus} Back     alignment and structure
>4ath_A MITF, microphthalmia-associated transcription factor; DNA binding protein, melanoma; HET: MSE; 1.95A {Mus musculus} Back     alignment and structure
>3muj_A Transcription factor COE3; immunoglobulin like fold, helix-loop-helix, structural genom consortium, SGC, DNA binding protein; 1.92A {Homo sapiens} PDB: 3mqi_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 566
d1mdya_68 a.38.1.1 (A:) Myod B/HLH domain {Mouse (Mus muscul 2e-14
d1nlwa_79 a.38.1.1 (A:) Mad protein {Human (Homo sapiens) [T 3e-14
d1an4a_65 a.38.1.1 (A:) Usf B/HLH domain {Human (Homo sapien 1e-13
d1nkpb_83 a.38.1.1 (B:) Max protein {Human (Homo sapiens) [T 7e-13
d1a0aa_63 a.38.1.1 (A:) Pho4 B/HLH domain {Baker's yeast (Sa 4e-12
d1am9a_80 a.38.1.1 (A:) SREBP-1a {Human (Homo sapiens) [TaxI 5e-12
d1nkpa_88 a.38.1.1 (A:) Myc proto-oncogene protein {Human (H 3e-11
>d1mdya_ a.38.1.1 (A:) Myod B/HLH domain {Mouse (Mus musculus) [TaxId: 10090]} Length = 68 Back     information, alignment and structure

class: All alpha proteins
fold: HLH-like
superfamily: HLH, helix-loop-helix DNA-binding domain
family: HLH, helix-loop-helix DNA-binding domain
domain: Myod B/HLH domain
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 66.4 bits (162), Expect = 2e-14
 Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 2/63 (3%)

Query: 442 REKERRQANNVRERIRIRDINEALKELGRMCMAHLKTDKPQTKLGILNMAVEVIMSLEQQ 501
              +RR+A  +RER R+  +NEA + L R   ++   ++   K+ IL  A+  I  L+  
Sbjct: 8   TNADRRKAATMRERRRLSKVNEAFETLKRSTSSN--PNQRLPKVEILRNAIRYIEGLQAL 65

Query: 502 VRE 504
           +R+
Sbjct: 66  LRD 68
>d1nlwa_ a.38.1.1 (A:) Mad protein {Human (Homo sapiens) [TaxId: 9606]} Length = 79 Back     information, alignment and structure
>d1an4a_ a.38.1.1 (A:) Usf B/HLH domain {Human (Homo sapiens) [TaxId: 9606]} Length = 65 Back     information, alignment and structure
>d1nkpb_ a.38.1.1 (B:) Max protein {Human (Homo sapiens) [TaxId: 9606]} Length = 83 Back     information, alignment and structure
>d1a0aa_ a.38.1.1 (A:) Pho4 B/HLH domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 63 Back     information, alignment and structure
>d1am9a_ a.38.1.1 (A:) SREBP-1a {Human (Homo sapiens) [TaxId: 9606]} Length = 80 Back     information, alignment and structure
>d1nkpa_ a.38.1.1 (A:) Myc proto-oncogene protein {Human (Homo sapiens) [TaxId: 9606]} Length = 88 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query566
d1mdya_68 Myod B/HLH domain {Mouse (Mus musculus) [TaxId: 10 99.54
d1nkpa_88 Myc proto-oncogene protein {Human (Homo sapiens) [ 99.31
d1nlwa_79 Mad protein {Human (Homo sapiens) [TaxId: 9606]} 99.31
d1nkpb_83 Max protein {Human (Homo sapiens) [TaxId: 9606]} 99.24
d1a0aa_63 Pho4 B/HLH domain {Baker's yeast (Saccharomyces ce 99.19
d1am9a_80 SREBP-1a {Human (Homo sapiens) [TaxId: 9606]} 99.14
d1an4a_65 Usf B/HLH domain {Human (Homo sapiens) [TaxId: 960 99.05
d1uklc_61 SREBP-2 {Human (Homo sapiens) [TaxId: 9606]} 98.4
>d1mdya_ a.38.1.1 (A:) Myod B/HLH domain {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
class: All alpha proteins
fold: HLH-like
superfamily: HLH, helix-loop-helix DNA-binding domain
family: HLH, helix-loop-helix DNA-binding domain
domain: Myod B/HLH domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.54  E-value=1.8e-15  Score=120.87  Aligned_cols=61  Identities=31%  Similarity=0.465  Sum_probs=54.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHh
Q psy15318        442 REKERRQANNVRERIRIRDINEALKELGRMCMAHLKTDKPQTKLGILNMAVEVIMSLEQQVRE  504 (566)
Q Consensus       442 rek~RR~aaNaRER~Rmr~IN~AF~eLRr~~p~~~~~dKklSKieiLr~Ai~YI~~L~~~Lre  504 (566)
                      ...+||.+.|++||.|..+||++|++||.+|| ..+ .+|++|++||+.||+||.+|+++|++
T Consensus         8 ~~~~rR~~hn~~Er~Rr~~in~~~~~L~~llP-~~~-~~k~sK~~iL~~Ai~YI~~Lq~~l~e   68 (68)
T d1mdya_           8 TNADRRKAATMRERRRLSKVNEAFETLKRSTS-SNP-NQRLPKVEILRNAIRYIEGLQALLRD   68 (68)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSC-SCT-TSCCCHHHHHHHHHHHHHHHHHTTCC
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CCC-CCCCCHHHHHHHHHHHHHHHHHHhhC
Confidence            45678999999999999999999999999999 544 46899999999999999999998864
>d1nkpa_ a.38.1.1 (A:) Myc proto-oncogene protein {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1nlwa_ a.38.1.1 (A:) Mad protein {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1nkpb_ a.38.1.1 (B:) Max protein {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1a0aa_ a.38.1.1 (A:) Pho4 B/HLH domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1am9a_ a.38.1.1 (A:) SREBP-1a {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1an4a_ a.38.1.1 (A:) Usf B/HLH domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1uklc_ a.38.1.1 (C:) SREBP-2 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure