Psyllid ID: psy15414

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------930-------940-------950-------960-------970-------980-------990------1000------1010------1020------1030------1040------1050------1060------1070------1080------1090------1100------1110------1120------1130------1140------1150------1160------1170------1180------1190------1200------1210------1220------1230------1240------1250------1260------1270------1280------1290------1300------1310------1320------1330------1340------1350------1360------1370------1380------1390------1400------1410------1420------1430------1440------1450------146
MSIKELKLKEFISKVNELSTKGFISESATEDVLAAQLQNTKLKHRLAILQRAIAEEEKKQGISSSISSQTKGAAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQAIAEEEKKQGISSSSSSQTKGTAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNIRTAIAEEEKKQGISSSISSQTKGAAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQ
ccHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccHHHHHHHHHccccccccHHHHHHHHHHHHHHHHcccccccccccEEEEccccEEEEEEcHHHHHHHHHHHHHccccccccccccEEEEEcccccccccccccccHHHHHHHHHHHHHHHccccEEEcccccccHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHcccEEEccccEEEEcccccccccEEEcccccccHHHHHHHHHHHHHHHccccEEEEEEEccHHHHHHHHHHHHHHcccccccccEEEEcccccccccccccccccccHHHHHHHHHHHHccccccccccccccccccccccccccHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHccccccccHHHHHccccccEEEEEEcHHHHHHHHHHHHHccccccccccccEEEEEcccccccccccccccHHHHHHHHHHHHHHHccccEEEcccccccHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHcccEEEccccEEEEccccccccEEEEcccccccHHHHHHHHHHHHHHHccccEEEEEEcccHHHHHHHHHHHHHHcccccccccccEEEcccEEEccccccccccccccEEHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccHHHHHHHHHHHHHHHHHHccccHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHccccccccccccccccccccccccccHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccHHHHHHHHHccccccccHHHHHHHHHHHHHHHccccccccccccEEEEccccEEEEEEcHHHHHHHHHHHHHccccccccccccEEEEEcccccccccccccccHHHHHHHHHHHHHHHccccEEEcccccccHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHcccEEEccccEEEEcccccccccEEEccccccHHHHHHHHHHHHHHHHccccEEEEEEEcccHHHccc
ccHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccHHHHHHHHHHHHHHccccccccHHHHHHHHHHHccccccccccHHHHHccccEccccEEEEEccHHHHHHHHHHHHHccccccccccccEEEEEcccHHHHHHHcHHHHHHHHHHHHHHHHHHHHcccEEEEcccccHHHHHHHHHHHHHHHcccHccccccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEcccccccHHHHHHHHHHHHcccEEEccccEEEEEcccccccEEEEEcccccEccHHHHHHHHHHHHHccccEEEEEEccHHHHHHHHHHHHHHHcccccccEEEEEcccccEccccccccHHHHHHHHHHHHHHHHHHcHccccccccccccccccccccccHHHHHHHHHHHHHccccccccHHHHHHHHHHHccccccccccHHHHHccccEccccEEEEEccHHHHHHHHHHHHHccccccccccccEEEEEcccHHHHHHHcHHcHHHHHHHHHHHHHHHHHcccEEEEcccccHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEcccccccHHHHHHHHHHHHcccEEEccccEEEEEcccccccEEEEEccccccccHHHHHHHHHHHHHHcccEEEEEEcccHHHHHHHHHHHHHHcccccccccEEEEEccEEEEccccccccccccccEEHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHEEEEcccccccccEEEcHHHHHHccccHHHHHHHHHHHHHHHHHHccccHHHHHHHHccccEEcccHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHccHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccEccccccccccHHHHHHHHHHHHcccHHHcccHHHHHHHHHHHccccccccHcHHHHHHHHEEccccEEEEEccHHHHHHHHHHHHHccccccccccccEEEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEcccccHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHcccEcccccccccccccHHHHHHHHHcccEEEccccEEEEEccccccEEEEEEccccEEEcHHHHHHHHHHHHHccccEEEEEEEcHHHHHHcc
MSIKELKLKEFISKVNELstkgfisesATEDVLAAQLQNTKLKHRLAILQRAIAEEEKKQGISSSISSQTkgaakkmnvpvrdrmsvRDYLSDVFTHAVQVafpelgdktasvastnekyvhkfgdfqcnDAMALCKIFKdkgekknpfdIAQSIASVVTselatnpslakVIDKIEVAKPGFVNVFLSRVyageqikdiivngvqpptlnkKLRVLVdfsspniakemhvgHLRSTIIGDTISRLLEYLGHdvvrlnhvgdwGTQFGMLIAHLQdkfpdyltksppiadLQAFYKESKkrfdedeifKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLekkgllelddgrkimwgedrgsipmtivksdggftydtsDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQAIAEEEkkqgissssssqtkgtakkmnvpvrdrmsvRDYLSDVFTHAVQVafpelgdktasvastnekyvhkfgdfqcnDAMALCKIFKdkgekknpfdIAQSIASVVTselatnpslakVIDKIEVAKPGFVNVFLSRVyageqikdiivngvqpptlnkKLRVLVdfsspniakemhvgHLRSTIIGDTISRLLEYLGHdvvrlnhvgdwGTQFGMLIAHLQdkfpdyltksppiadLQAFYKESKkrfdedeifKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLekkgllelddgrkimwgedrgsipmtivksdggftydtsDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKagilnpnktrmdFVGFGVVLgedrkkfktrsgdtvkLSELLDEGLRRSLDKlkdknrhteltpteLSEAQQAVAYGCIKyadlshnrnldyVFSFdkmlddrgnTAVYLLYAYTRIASIArtaginsedlrvaaqstpvslEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEfydncyciekdaegkiktvHTGRLLLAEATAKVMKKCFDILNIRTAIAEEEkkqgisssiSSQTkgaakkmnvpvrdrmsvRDYLSDVFTHAVQVafpelgdktasvastnekyvhkfgdfqcnDAMALCKIFKdkgekknpfdIAQSIASVVTselatnpslakVIDKIEVAKPGFVNVFLSRVyageqikdiivngvqpptlnkKLRVLVdfsspniakemhvgHLRSTIIGDTISRLLEYLGHdvvrlnhvgdwGTQFGMLIAHLQdkfpdyltksppiadLQAFYKESKkrfdedeifKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLekkgllelddgrkimwgedrgsipmtivksdggftydtsDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQ
MSIKELKLKEFISKVNELSTKGFISESATEDVLAAQLQNTKLKHRLAILQRAIAeeekkqgisssissqtkgaakkmnvpvrdrMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIivngvqpptlnKKLRVLVDFSSpniakemhvghlrSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKrfdedeifkkRAYQCVVALqrfdpdykKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKimwgedrgsipmtivksdggftydTSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQAIAEeekkqgissssssqtkgtakkmnvpvrdrMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIivngvqpptlnKKLRVLVDFSSpniakemhvghlrSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKrfdedeifkkRAYQCVVALqrfdpdykKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKimwgedrgsipmtivksdggftydTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKagilnpnktrmdFVGFGvvlgedrkkfktrsgdtvklselldeglrrsldklkdknrhteltptelseaQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNIRTAIaeeekkqgisssissqtkgaakkmnvpvrdrMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIivngvqpptlnKKLRVLVDFSSpniakemhvghlrSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKrfdedeifkkRAYQCVVALqrfdpdykKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKimwgedrgsipmtivksdggftydTSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQ
MSIKELKLKEFISKVNELSTKGFISESATEDVLAAQLQNTKLKHRLAILQRAIAEEEKKQGisssissQTKGAAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQAIAEEEKKQGIssssssQTKGTAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNIRTAIAEEEKKQGisssissQTKGAAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQ
***********I*********GFI******DVLAAQLQNTKLKHRLAILQR*********************************MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQAI********************************SVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGED***********************************************QAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNIRTAIA******************************MSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDHRSY*****
******K***FISKVN**********************NTKLKHRLAIL********************************RDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKD*GEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIV*********KKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQAIAEEEKKQGISSSSSSQ*******************DYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFK*************SIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDI*************LRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRS******************SEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNIRTAI********************************SVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKD*GEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIV********NKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDHRSYHQVL*
MSIKELKLKEFISKVNELSTKGFISESATEDVLAAQLQNTKLKHRLAILQRAIAE***********************VPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQAIAE**********************NVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNIRTAIAEE**********************VPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQ
MSIKELKLKEFISKVNELSTKGFISESATEDVLAAQLQNTKLKHRLAILQRAIAEEEK******************MNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQAIAEEEKKQGISSSSSSQTKGTAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNIRTAIAEEEKKQGISSSISSQTKGAAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDHRSY*****
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oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MSIKELKLKEFISKVNELSTKGFISESATEDVLAAQLQxxxxxxxxxxxxxxxxxxxxxQGISSSISSQTKGAAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQAIAEEEKKQGISSSSSSQTKGTAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNIRTAIAEEEKKQGISSSISSQTKGAAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDHRSYHQVLQ
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query1458 2.2.26 [Sep-21-2011]
Q9VXN4665 Probable arginine--tRNA l yes N/A 0.401 0.881 0.586 0.0
Q6P1S4660 Arginine--tRNA ligase, cy yes N/A 0.399 0.883 0.581 0.0
P37880661 Arginine--tRNA ligase, cy yes N/A 0.406 0.895 0.583 0.0
P54136660 Arginine--tRNA ligase, cy yes N/A 0.408 0.901 0.585 0.0
Q9D0I9660 Arginine--tRNA ligase, cy yes N/A 0.401 0.887 0.587 0.0
Q5ZM11661 Arginine--tRNA ligase, cy yes N/A 0.401 0.885 0.582 0.0
Q5RA20660 Arginine--tRNA ligase, cy yes N/A 0.403 0.890 0.580 0.0
P40329660 Arginine--tRNA ligase, cy yes N/A 0.401 0.887 0.582 0.0
A7YW98660 Arginine--tRNA ligase, cy yes N/A 0.408 0.901 0.567 0.0
Q19825713 Probable arginine--tRNA l yes N/A 0.411 0.841 0.503 1e-168
>sp|Q9VXN4|SYRC_DROME Probable arginine--tRNA ligase, cytoplasmic OS=Drosophila melanogaster GN=Aats-arg PE=2 SV=1 Back     alignment and function desciption
 Score =  734 bits (1896), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 350/597 (58%), Positives = 458/597 (76%), Gaps = 11/597 (1%)

Query: 472  RDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKD 531
            ++  S+ ++L  VF  A+  AFPE  D    +A  N     KFGD+QCN+AM L K  K+
Sbjct: 74   KESSSITEHLESVFRQAIASAFPEFRDTPVIIAPVNSTSA-KFGDYQCNNAMGLSKKLKE 132

Query: 532  KGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDII 591
            KG  K P DIA        +EL  +   + +I+K+E+A  GFVNVFLS+ YA   + +++
Sbjct: 133  KGINKAPRDIA--------TELKGHCPASPIIEKLEIAGAGFVNVFLSKDYASLALSNLL 184

Query: 592  VNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVG 651
             NGV+PP + KK RVLVDFSSPNIAK+MHVGHLRSTIIG+++ RLLE+L HDV+R+NH+G
Sbjct: 185  RNGVKPPEVIKK-RVLVDFSSPNIAKQMHVGHLRSTIIGESLCRLLEFLQHDVIRINHLG 243

Query: 652  DWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR 711
            DWGTQFGMLIAHL+D+FP+YL +SPPI+DLQ FYKESKKRFDEDE FKKRAY  VV+LQ+
Sbjct: 244  DWGTQFGMLIAHLEDRFPNYLNESPPISDLQLFYKESKKRFDEDEEFKKRAYSRVVSLQK 303

Query: 712  FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDD 771
              P+  KAWE+IC+VSR++FQ IY+RL++++ ERGESFYQ  M  +V YL  KGLLE+D+
Sbjct: 304  GVPNSIKAWELICNVSRKEFQTIYERLDISVKERGESFYQSRMLSVVEYLRGKGLLEVDE 363

Query: 772  GRKIMWGED-RGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFR 830
            GR+IMW +D +  IP+TIVKSDGGFTYDTSD+AAIR R+EEE  DWI+YV D GQ  HF 
Sbjct: 364  GREIMWPDDTKTGIPLTIVKSDGGFTYDTSDMAAIRHRLEEELCDWIIYVVDSGQSTHFN 423

Query: 831  LLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKL 890
             + + A+++ ILNP   R+D V FGVVLGED KKFKTRSGDTVKLS+LLDEG++RSL +L
Sbjct: 424  TIFKAAERSAILNPLSHRVDHVQFGVVLGEDGKKFKTRSGDTVKLSDLLDEGMKRSLQQL 483

Query: 891  KDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYA 950
            + + R   LTP EL +AQ+++AYGCIKY+DL HNR  DY+FSFDKML+DRGNTAVYLLY 
Sbjct: 484  ESRGRDKVLTPQELKDAQESLAYGCIKYSDLCHNRISDYIFSFDKMLEDRGNTAVYLLYT 543

Query: 951  YTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHL 1010
            YTRI SIAR +G +  +L    + T + L+HEKE+ LAKTLL+++D+L+  +++L LH L
Sbjct: 544  YTRICSIARNSGEDFTNLPEILKKTNIVLDHEKEWKLAKTLLKLHDILIKCSKELFLHFL 603

Query: 1011 CEYLYDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNIR 1067
            CE+ +++ T F+EFYD+CYCIEK+ +G I  V+  R+LL EATA V+++CF IL ++
Sbjct: 604  CEFCFEVCTVFTEFYDSCYCIEKNKQGDIIGVNHSRILLCEATAAVLRQCFYILGLK 660
Forms part of a macromolecular complex that catalyzes the attachment of specific amino acids to cognate tRNAs during protein synthesis.
Drosophila melanogaster (taxid: 7227)
EC: 6EC: .EC: 1EC: .EC: 1EC: .EC: 1EC: 9
>sp|Q6P1S4|SYRC_XENTR Arginine--tRNA ligase, cytoplasmic OS=Xenopus tropicalis GN=rars PE=2 SV=1 Back     alignment and function description
>sp|P37880|SYRC_CRIGR Arginine--tRNA ligase, cytoplasmic OS=Cricetulus griseus GN=RARS PE=2 SV=1 Back     alignment and function description
>sp|P54136|SYRC_HUMAN Arginine--tRNA ligase, cytoplasmic OS=Homo sapiens GN=RARS PE=1 SV=2 Back     alignment and function description
>sp|Q9D0I9|SYRC_MOUSE Arginine--tRNA ligase, cytoplasmic OS=Mus musculus GN=Rars PE=2 SV=2 Back     alignment and function description
>sp|Q5ZM11|SYRC_CHICK Arginine--tRNA ligase, cytoplasmic OS=Gallus gallus GN=RARS PE=2 SV=1 Back     alignment and function description
>sp|Q5RA20|SYRC_PONAB Arginine--tRNA ligase, cytoplasmic OS=Pongo abelii GN=RARS PE=2 SV=1 Back     alignment and function description
>sp|P40329|SYRC_RAT Arginine--tRNA ligase, cytoplasmic OS=Rattus norvegicus GN=Rars PE=1 SV=2 Back     alignment and function description
>sp|A7YW98|SYRC_BOVIN Arginine--tRNA ligase, cytoplasmic OS=Bos taurus GN=RARS PE=2 SV=1 Back     alignment and function description
>sp|Q19825|SYRC_CAEEL Probable arginine--tRNA ligase, cytoplasmic OS=Caenorhabditis elegans GN=rrt-1 PE=2 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query1458
157117728671 arginyl-tRNA synthetase [Aedes aegypti] 0.414 0.901 0.603 0.0
350420346674 PREDICTED: arginyl-tRNA synthetase, cyto 0.407 0.881 0.613 0.0
170028825664 arginyl-tRNA synthetase [Culex quinquefa 0.398 0.875 0.627 0.0
383862219675 PREDICTED: arginine--tRNA ligase, cytopl 0.398 0.860 0.617 0.0
380013212674 PREDICTED: LOW QUALITY PROTEIN: arginine 0.407 0.881 0.604 0.0
340712657674 PREDICTED: arginyl-tRNA synthetase, cyto 0.407 0.881 0.607 0.0
66501636674 PREDICTED: arginyl-tRNA synthetase, cyto 0.407 0.881 0.604 0.0
91080725671 PREDICTED: similar to arginyl-tRNA synth 0.410 0.892 0.604 0.0
118790236663 AGAP004708-PA [Anopheles gambiae str. PE 0.397 0.873 0.607 0.0
307193340683 Arginyl-tRNA synthetase, cytoplasmic [Ha 0.399 0.853 0.609 0.0
>gi|157117728|ref|XP_001658908.1| arginyl-tRNA synthetase [Aedes aegypti] gi|108884575|gb|EAT48800.1| AAEL000199-PA [Aedes aegypti] Back     alignment and taxonomy information
 Score =  788 bits (2034), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 379/628 (60%), Positives = 477/628 (75%), Gaps = 23/628 (3%)

Query: 441  QAIAEEEKKQGISSSSSSQTKGTAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKT 500
            +AIA E   QG +S S S +         P    +S+ D+LS++FT A+  AFP++    
Sbjct: 61   KAIAAE---QGHASDSGSPS--------TPNGGAVSILDHLSNLFTQAIATAFPQVCQDV 109

Query: 501  ASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLA 560
             +V + +     KFGD+QCN+AM + +  K    K NP D+A  +        A  PS A
Sbjct: 110  PAVITVSSSA--KFGDYQCNNAMQIVQKLKALDVKTNPRDVANKLME------ALPPSPA 161

Query: 561  KVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMH 620
              I K+EVA  GFVNVFL + +    I  I+ +GV+PP   K+ RV+VDFSSPNIAKEMH
Sbjct: 162  --ISKVEVAGAGFVNVFLDKAFGASAIMSILKDGVKPPQFEKR-RVIVDFSSPNIAKEMH 218

Query: 621  VGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIAD 680
            VGHLRSTIIGD+ISR LE+LGHDV+RLNHVGDWGTQFGMLIAHLQD+FPDYL  SPPI+D
Sbjct: 219  VGHLRSTIIGDSISRFLEFLGHDVLRLNHVGDWGTQFGMLIAHLQDRFPDYLKVSPPISD 278

Query: 681  LQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNV 740
            LQ FYKESK RFD DE FKKRAY CVV LQ  D D  KAW++ICDVSR++FQK+YDRLNV
Sbjct: 279  LQGFYKESKSRFDSDEDFKKRAYACVVKLQSGDDDSMKAWKLICDVSRKEFQKVYDRLNV 338

Query: 741  TLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTS 800
             L ERGESFYQK ME +V  L   G LE D+GRKIMWGE+R  IP+TI+KSDGGFTYDTS
Sbjct: 339  KLIERGESFYQKRMEAIVKELANAGFLEEDEGRKIMWGENRNGIPLTIIKSDGGFTYDTS 398

Query: 801  DLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGE 860
            D+AAI+QR+ EEK +W+VYVTD GQ  HF+ +  CA++A +L+PN  R+D VGFGVVLGE
Sbjct: 399  DMAAIKQRLHEEKGEWLVYVTDAGQATHFQTIFSCARRANVLDPNVHRVDHVGFGVVLGE 458

Query: 861  DRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYAD 920
            D KKFKTRSGDTVKL+ELLDEGL+RSLDKL +K R   LTP EL +AQ++VAYGCIKYAD
Sbjct: 459  DGKKFKTRSGDTVKLTELLDEGLKRSLDKLLEKERDKVLTPEELKQAQESVAYGCIKYAD 518

Query: 921  LSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGIN-SEDLRVAAQSTPVSL 979
            LSHNRN +Y+FSFDKML+D+GNTAVYLLYAYTRI SIAR  G + + ++     +T ++L
Sbjct: 519  LSHNRNNEYIFSFDKMLEDKGNTAVYLLYAYTRIRSIARNCGGDFANNIEKVIDTTELTL 578

Query: 980  EHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYCIEKDAEGKI 1039
            +HEKE+ LAK LL+  DV+ L++++LCLHHLCE++Y++ST F+EFYD+CYCIEK+ +G+I
Sbjct: 579  DHEKEWKLAKVLLKFTDVMKLISKNLCLHHLCEFVYEVSTTFTEFYDSCYCIEKNKQGEI 638

Query: 1040 KTVHTGRLLLAEATAKVMKKCFDILNIR 1067
              ++ GR+LL EAT++++ KCFDIL ++
Sbjct: 639  VKINAGRVLLCEATSRILGKCFDILGLK 666

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota
>gi|350420346|ref|XP_003492480.1| PREDICTED: arginyl-tRNA synthetase, cytoplasmic-like [Bombus impatiens] Back     alignment and taxonomy information
>gi|170028825|ref|XP_001842295.1| arginyl-tRNA synthetase [Culex quinquefasciatus] gi|167877980|gb|EDS41363.1| arginyl-tRNA synthetase [Culex quinquefasciatus] Back     alignment and taxonomy information
>gi|383862219|ref|XP_003706581.1| PREDICTED: arginine--tRNA ligase, cytoplasmic-like [Megachile rotundata] Back     alignment and taxonomy information
>gi|380013212|ref|XP_003690660.1| PREDICTED: LOW QUALITY PROTEIN: arginine--tRNA ligase, cytoplasmic-like [Apis florea] Back     alignment and taxonomy information
>gi|340712657|ref|XP_003394872.1| PREDICTED: arginyl-tRNA synthetase, cytoplasmic-like [Bombus terrestris] Back     alignment and taxonomy information
>gi|66501636|ref|XP_623301.1| PREDICTED: arginyl-tRNA synthetase, cytoplasmic [Apis mellifera] Back     alignment and taxonomy information
>gi|91080725|ref|XP_975392.1| PREDICTED: similar to arginyl-tRNA synthetase [Tribolium castaneum] gi|270005463|gb|EFA01911.1| hypothetical protein TcasGA2_TC007521 [Tribolium castaneum] Back     alignment and taxonomy information
>gi|118790236|ref|XP_318119.3| AGAP004708-PA [Anopheles gambiae str. PEST] gi|116122419|gb|EAA13294.3| AGAP004708-PA [Anopheles gambiae str. PEST] Back     alignment and taxonomy information
>gi|307193340|gb|EFN76202.1| Arginyl-tRNA synthetase, cytoplasmic [Harpegnathos saltator] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query1458
ZFIN|ZDB-GENE-030131-9014661 rars "arginyl-tRNA synthetase" 0.404 0.892 0.588 1.3e-193
UNIPROTKB|P54136660 RARS "Arginine--tRNA ligase, c 0.421 0.930 0.572 7e-193
MGI|MGI:1914297660 Rars "arginyl-tRNA synthetase" 0.401 0.887 0.587 1.9e-192
UNIPROTKB|Q5ZM11661 RARS "Arginine--tRNA ligase, c 0.408 0.900 0.574 1e-191
UNIPROTKB|E2QRR5660 RARS "Uncharacterized protein" 0.401 0.887 0.577 7.2e-191
RGD|1309215660 Rars "arginyl-tRNA synthetase" 0.401 0.887 0.582 1.9e-190
UNIPROTKB|A7YW98660 RARS "Arginine--tRNA ligase, c 0.421 0.930 0.554 2.8e-189
FB|FBgn0027093665 Aats-arg "Arginyl-tRNA synthet 0.401 0.881 0.586 8.8e-189
UNIPROTKB|J9P440643 RARS "Uncharacterized protein" 0.380 0.863 0.583 5.3e-184
UNIPROTKB|F1NFP5608 RARS "Arginine--tRNA ligase, c 0.375 0.901 0.568 1.2e-175
ZFIN|ZDB-GENE-030131-9014 rars "arginyl-tRNA synthetase" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
 Score = 1840 (652.8 bits), Expect = 1.3e-193, Sum P(2) = 1.3e-193
 Identities = 355/603 (58%), Positives = 462/603 (76%)

Query:   465 KKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMA 524
             ++MN   +  +++   L  +F  A+  A+P+L +   SV  + +    KFGD+QCN AMA
Sbjct:    65 EEMNHNGKTMLNINQLLQQIFGEAISSAYPDLENPPLSVTPSQQA---KFGDYQCNSAMA 121

Query:   525 LCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAG 584
             + ++ K KG K +P +IA+ I   + +          +I+K E+A PGF+NV L R +  
Sbjct:   122 MSQMMKAKGLKVSPREIAEKIVQNIPNN--------DLIEKTEIAGPGFINVHLKRNFVS 173

Query:   585 EQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDV 644
             + + +++VNGVQPP L KK +V+VDFSSPNIAKEMHVGHLRSTIIGD++ RL E+LG++V
Sbjct:   174 KLLSNVLVNGVQPPPLQKKKKVIVDFSSPNIAKEMHVGHLRSTIIGDSMCRLFEFLGYEV 233

Query:   645 VRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQ 704
             +RLNHVGDWGTQFGMLIAHLQDKFP+YL+ SPPI DLQAFYKESKKRFDEDE FKKRAY+
Sbjct:   234 LRLNHVGDWGTQFGMLIAHLQDKFPNYLSVSPPIGDLQAFYKESKKRFDEDEEFKKRAYK 293

Query:   705 CVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKK 764
             CVV LQ  + D+ KAW +ICDVSR++FQK+Y+ L++++ ERGES+YQ  M  +V   E+K
Sbjct:   294 CVVKLQSKEADFIKAWNLICDVSRKEFQKVYNCLDISIKERGESYYQDMMTAVVKEFEEK 353

Query:   765 GLLELDDGRKIMWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLG 824
             GL+E+D+GRKI++   + SIP+TIVKSDGG+TYDTSDLAAIR R+ +EKAD I+YVTD G
Sbjct:   354 GLVEVDEGRKIVFAPGQ-SIPLTIVKSDGGYTYDTSDLAAIRNRLFDEKADIIIYVTDSG 412

Query:   825 QGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLR 884
             Q +HF+++   A+  G  +P  TR++  GFGVVLGED+KKFKTRSGDTV+L +LL+EGL+
Sbjct:   413 QAMHFQVIFAAAQLIGWYDPKVTRVEHAGFGVVLGEDKKKFKTRSGDTVRLMDLLEEGLK 472

Query:   885 RSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTA 944
             RS+DKLK+K R   LTP EL +AQ+AVA+GCIKYADLSHNR  DYVFSFDKMLDDRGNTA
Sbjct:   473 RSMDKLKEKERDKVLTPEELEKAQRAVAFGCIKYADLSHNRINDYVFSFDKMLDDRGNTA 532

Query:   945 VYLLYAYTRIASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRD 1004
              YLLYA+TRI SIAR A I    LR AA++T V L+HEKE+ L K +LR  ++L  +T D
Sbjct:   533 AYLLYAFTRIRSIARLANIQEAALRKAAETTDVILDHEKEWKLGKCILRFPEILQKITDD 592

Query:  1005 LCLHHLCEYLYDISTAFSEFYDNCYCIEKDAE-GKIKTVHTGRLLLAEATAKVMKKCFDI 1063
             L LH LC+YLY+++T F+EFYD+CYC+EKD + G++  V+  R+LL EATA VM K FDI
Sbjct:   593 LLLHTLCDYLYELATTFTEFYDSCYCVEKDRQTGEVVKVNMWRMLLCEATAAVMAKGFDI 652

Query:  1064 LNI 1066
             L I
Sbjct:   653 LGI 655
GO:0000166 "nucleotide binding" evidence=IEA
GO:0004814 "arginine-tRNA ligase activity" evidence=IEA
GO:0005524 "ATP binding" evidence=IEA
GO:0005737 "cytoplasm" evidence=IEA
GO:0006418 "tRNA aminoacylation for protein translation" evidence=IEA
GO:0006420 "arginyl-tRNA aminoacylation" evidence=IEA
GO:0004812 "aminoacyl-tRNA ligase activity" evidence=IEA
GO:0006412 "translation" evidence=IEA
GO:0016874 "ligase activity" evidence=IEA
UNIPROTKB|P54136 RARS "Arginine--tRNA ligase, cytoplasmic" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
MGI|MGI:1914297 Rars "arginyl-tRNA synthetase" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|Q5ZM11 RARS "Arginine--tRNA ligase, cytoplasmic" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|E2QRR5 RARS "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
RGD|1309215 Rars "arginyl-tRNA synthetase" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|A7YW98 RARS "Arginine--tRNA ligase, cytoplasmic" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
FB|FBgn0027093 Aats-arg "Arginyl-tRNA synthetase" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
UNIPROTKB|J9P440 RARS "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|F1NFP5 RARS "Arginine--tRNA ligase, cytoplasmic" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
P40329SYRC_RAT6, ., 1, ., 1, ., 1, 90.58260.40190.8878yesN/A
P37880SYRC_CRIGR6, ., 1, ., 1, ., 1, 90.58340.40600.8956yesN/A
Q5RA20SYRC_PONAB6, ., 1, ., 1, ., 1, 90.58060.40320.8909yesN/A
Q9D0I9SYRC_MOUSE6, ., 1, ., 1, ., 1, 90.58760.40190.8878yesN/A
P54136SYRC_HUMAN6, ., 1, ., 1, ., 1, 90.58550.40800.9015yesN/A
Q19825SYRC_CAEEL6, ., 1, ., 1, ., 1, 90.50390.41150.8415yesN/A
Q9VXN4SYRC_DROME6, ., 1, ., 1, ., 1, 90.58620.40190.8812yesN/A
Q5ZM11SYRC_CHICK6, ., 1, ., 1, ., 1, 90.58260.40120.8850yesN/A
A7YW98SYRC_BOVIN6, ., 1, ., 1, ., 1, 90.56740.40800.9015yesN/A
Q6P1S4SYRC_XENTR6, ., 1, ., 1, ., 1, 90.58190.39980.8833yesN/A

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
4th Layer6.1.1.190.737
3rd Layer6.1.10.691

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query1458
PLN02286576 PLN02286, PLN02286, arginine-tRNA ligase 0.0
COG0018577 COG0018, ArgS, Arginyl-tRNA synthetase [Translatio 1e-148
PRK01611507 PRK01611, argS, arginyl-tRNA synthetase; Reviewed 1e-140
PLN02286576 PLN02286, PLN02286, arginine-tRNA ligase 1e-138
PLN02286 576 PLN02286, PLN02286, arginine-tRNA ligase 1e-138
pfam00750345 pfam00750, tRNA-synt_1d, tRNA synthetases class I 1e-124
TIGR00456566 TIGR00456, argS, arginyl-tRNA synthetase 1e-116
pfam00750345 pfam00750, tRNA-synt_1d, tRNA synthetases class I 2e-91
pfam00750345 pfam00750, tRNA-synt_1d, tRNA synthetases class I 4e-90
COG0018577 COG0018, ArgS, Arginyl-tRNA synthetase [Translatio 1e-83
COG0018 577 COG0018, ArgS, Arginyl-tRNA synthetase [Translatio 1e-82
PRK12451562 PRK12451, PRK12451, arginyl-tRNA synthetase; Revie 8e-81
PRK01611507 PRK01611, argS, arginyl-tRNA synthetase; Reviewed 2e-74
PRK01611 507 PRK01611, argS, arginyl-tRNA synthetase; Reviewed 1e-72
cd00671212 cd00671, ArgRS_core, catalytic core domain of argi 3e-69
TIGR00456566 TIGR00456, argS, arginyl-tRNA synthetase 3e-64
TIGR00456 566 TIGR00456, argS, arginyl-tRNA synthetase 2e-63
cd00671212 cd00671, ArgRS_core, catalytic core domain of argi 2e-58
cd00671212 cd00671, ArgRS_core, catalytic core domain of argi 1e-56
PRK12451562 PRK12451, PRK12451, arginyl-tRNA synthetase; Revie 2e-49
PRK12451 562 PRK12451, PRK12451, arginyl-tRNA synthetase; Revie 2e-49
cd07956156 cd07956, Anticodon_Ia_Arg, Anticodon-binding domai 1e-32
pfam05746117 pfam05746, DALR_1, DALR anticodon binding domain 7e-28
smart00836122 smart00836, DALR_1, DALR anticodon binding domain 2e-27
pfam0348584 pfam03485, Arg_tRNA_synt_N, Arginyl tRNA synthetas 2e-15
pfam0348584 pfam03485, Arg_tRNA_synt_N, Arginyl tRNA synthetas 2e-15
pfam0348584 pfam03485, Arg_tRNA_synt_N, Arginyl tRNA synthetas 2e-15
smart0101685 smart01016, Arg_tRNA_synt_N, Arginyl tRNA syntheta 9e-14
smart0101685 smart01016, Arg_tRNA_synt_N, Arginyl tRNA syntheta 9e-14
smart0101685 smart01016, Arg_tRNA_synt_N, Arginyl tRNA syntheta 9e-14
cd00802143 cd00802, class_I_aaRS_core, catalytic core domain 2e-07
cd00802143 cd00802, class_I_aaRS_core, catalytic core domain 2e-07
cd00802143 cd00802, class_I_aaRS_core, catalytic core domain 2e-07
>gnl|CDD|215160 PLN02286, PLN02286, arginine-tRNA ligase Back     alignment and domain information 
 Score =  705 bits (1822), Expect = 0.0
 Identities = 290/593 (48%), Positives = 395/593 (66%), Gaps = 30/593 (5%)

Query: 481  LSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKG-EKKNPF 539
            L+ +F  ++++  P+       VA+       KFGD+QCN+AM L    K KG   KNP 
Sbjct: 3    LAKLFEASLRLTVPDEPSVEPLVAACTNP---KFGDYQCNNAMGLWSKLKGKGTSFKNPR 59

Query: 540  DIAQSI-ASVVTSELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQP- 597
             +AQ+I  ++  SE+         I+   VA PGFVNV LS  +  ++I+ ++V+G+   
Sbjct: 60   AVAQAIVKNLPASEM---------IESTSVAGPGFVNVRLSASWLAKRIERMLVDGIDTW 110

Query: 598  -PTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQ 656
             PTL  K R +VDFSSPNIAKEMHVGHLRSTIIGDT++R+LE+ G +V+R NHVGDWGTQ
Sbjct: 111  APTLPVK-RAVVDFSSPNIAKEMHVGHLRSTIIGDTLARMLEFSGVEVLRRNHVGDWGTQ 169

Query: 657  FGMLIAHLQDKFPDYLT-KSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQRFDPD 715
            FGMLI HL +KFP++ +     I DLQ FYK +KKRFDEDE FK RA Q VV LQ  DP+
Sbjct: 170  FGMLIEHLFEKFPNWESVSDQAIGDLQEFYKAAKKRFDEDEEFKARAQQAVVRLQGGDPE 229

Query: 716  YKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKI 775
            Y+ AW  IC++SRR+F+K+Y RL V L E+GESFY  ++  ++  LE KGL+   DG ++
Sbjct: 230  YRAAWAKICEISRREFEKVYQRLRVELEEKGESFYNPYIPGVIEELESKGLVVESDGARV 289

Query: 776  MWGEDRGSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEEC 835
            ++ E    IP+ +VKSDGGF Y ++DLAA+  R+ EEKA+WI+YVTD+GQ  HF ++ + 
Sbjct: 290  IFVEGF-DIPLIVVKSDGGFNYASTDLAALWYRLNEEKAEWIIYVTDVGQQQHFDMVFKA 348

Query: 836  AKKAGIL-NPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKN 894
            AK+AG L      R++ VGFG+VLGED K+F+TRSG+ V+L +LLDE   RS   L ++ 
Sbjct: 349  AKRAGWLPEDTYPRLEHVGFGLVLGEDGKRFRTRSGEVVRLVDLLDEAKSRSKAALIERG 408

Query: 895  RHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRI 954
            + +E TP EL +A +AV YG +KYADL +NR  +Y FSFD+MLD +GNTAVYLLYA+ RI
Sbjct: 409  KDSEWTPEELEQAAEAVGYGAVKYADLKNNRLTNYTFSFDQMLDLKGNTAVYLLYAHARI 468

Query: 955  ASIARTAGINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYL 1014
             SI R +G + ++L    ++  + L+H  E AL   LL+  +V+     DL  + LCEYL
Sbjct: 469  CSIIRKSGKDIDEL---KKTGKIVLDHPDERALGLHLLQFPEVVEEACTDLLPNRLCEYL 525

Query: 1015 YDISTAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNIR 1067
            Y++S  F++FY NC     + E       T RLLL EATA VM+KCF +L I 
Sbjct: 526  YNLSEKFTKFYSNCKVNGSEEE-------TSRLLLCEATAIVMRKCFHLLGIT 571

Length = 576
>gnl|CDD|223097 COG0018, ArgS, Arginyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>gnl|CDD|234964 PRK01611, argS, arginyl-tRNA synthetase; Reviewed Back     alignment and domain information
>gnl|CDD|215160 PLN02286, PLN02286, arginine-tRNA ligase Back     alignment and domain information
>gnl|CDD|215160 PLN02286, PLN02286, arginine-tRNA ligase Back     alignment and domain information
>gnl|CDD|216097 pfam00750, tRNA-synt_1d, tRNA synthetases class I (R) Back     alignment and domain information
>gnl|CDD|232981 TIGR00456, argS, arginyl-tRNA synthetase Back     alignment and domain information
>gnl|CDD|216097 pfam00750, tRNA-synt_1d, tRNA synthetases class I (R) Back     alignment and domain information
>gnl|CDD|216097 pfam00750, tRNA-synt_1d, tRNA synthetases class I (R) Back     alignment and domain information
>gnl|CDD|223097 COG0018, ArgS, Arginyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>gnl|CDD|223097 COG0018, ArgS, Arginyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>gnl|CDD|183534 PRK12451, PRK12451, arginyl-tRNA synthetase; Reviewed Back     alignment and domain information
>gnl|CDD|234964 PRK01611, argS, arginyl-tRNA synthetase; Reviewed Back     alignment and domain information
>gnl|CDD|234964 PRK01611, argS, arginyl-tRNA synthetase; Reviewed Back     alignment and domain information
>gnl|CDD|185675 cd00671, ArgRS_core, catalytic core domain of arginyl-tRNA synthetases Back     alignment and domain information
>gnl|CDD|232981 TIGR00456, argS, arginyl-tRNA synthetase Back     alignment and domain information
>gnl|CDD|232981 TIGR00456, argS, arginyl-tRNA synthetase Back     alignment and domain information
>gnl|CDD|185675 cd00671, ArgRS_core, catalytic core domain of arginyl-tRNA synthetases Back     alignment and domain information
>gnl|CDD|185675 cd00671, ArgRS_core, catalytic core domain of arginyl-tRNA synthetases Back     alignment and domain information
>gnl|CDD|183534 PRK12451, PRK12451, arginyl-tRNA synthetase; Reviewed Back     alignment and domain information
>gnl|CDD|183534 PRK12451, PRK12451, arginyl-tRNA synthetase; Reviewed Back     alignment and domain information
>gnl|CDD|153410 cd07956, Anticodon_Ia_Arg, Anticodon-binding domain of arginyl tRNA synthetases Back     alignment and domain information
>gnl|CDD|218729 pfam05746, DALR_1, DALR anticodon binding domain Back     alignment and domain information
>gnl|CDD|214846 smart00836, DALR_1, DALR anticodon binding domain Back     alignment and domain information
>gnl|CDD|217589 pfam03485, Arg_tRNA_synt_N, Arginyl tRNA synthetase N terminal domain Back     alignment and domain information
>gnl|CDD|217589 pfam03485, Arg_tRNA_synt_N, Arginyl tRNA synthetase N terminal domain Back     alignment and domain information
>gnl|CDD|217589 pfam03485, Arg_tRNA_synt_N, Arginyl tRNA synthetase N terminal domain Back     alignment and domain information
>gnl|CDD|214975 smart01016, Arg_tRNA_synt_N, Arginyl tRNA synthetase N terminal dom Back     alignment and domain information
>gnl|CDD|214975 smart01016, Arg_tRNA_synt_N, Arginyl tRNA synthetase N terminal dom Back     alignment and domain information
>gnl|CDD|214975 smart01016, Arg_tRNA_synt_N, Arginyl tRNA synthetase N terminal dom Back     alignment and domain information
>gnl|CDD|173901 cd00802, class_I_aaRS_core, catalytic core domain of class I amino acyl-tRNA synthetase Back     alignment and domain information
>gnl|CDD|173901 cd00802, class_I_aaRS_core, catalytic core domain of class I amino acyl-tRNA synthetase Back     alignment and domain information
>gnl|CDD|173901 cd00802, class_I_aaRS_core, catalytic core domain of class I amino acyl-tRNA synthetase Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 1458
KOG4426|consensus656 100.0
COG0018577 ArgS Arginyl-tRNA synthetase [Translation, ribosom 100.0
PLN02286576 arginine-tRNA ligase 100.0
PRK12451562 arginyl-tRNA synthetase; Reviewed 100.0
KOG4426|consensus656 100.0
TIGR00456566 argS arginyl-tRNA synthetase. This model recognize 100.0
PRK01611507 argS arginyl-tRNA synthetase; Reviewed 100.0
KOG1195|consensus567 100.0
COG0018577 ArgS Arginyl-tRNA synthetase [Translation, ribosom 100.0
PLN02286576 arginine-tRNA ligase 100.0
PRK12451562 arginyl-tRNA synthetase; Reviewed 100.0
TIGR00456566 argS arginyl-tRNA synthetase. This model recognize 100.0
PF00750354 tRNA-synt_1d: tRNA synthetases class I (R); InterP 100.0
PF00750354 tRNA-synt_1d: tRNA synthetases class I (R); InterP 100.0
PRK01611507 argS arginyl-tRNA synthetase; Reviewed 100.0
KOG1195|consensus567 100.0
cd00671212 ArgRS_core catalytic core domain of arginyl-tRNA s 100.0
cd00671212 ArgRS_core catalytic core domain of arginyl-tRNA s 100.0
PTZ00399651 cysteinyl-tRNA-synthetase; Provisional 100.0
PLN02946557 cysteine-tRNA ligase 100.0
COG0215464 CysS Cysteinyl-tRNA synthetase [Translation, ribos 100.0
PRK00260463 cysS cysteinyl-tRNA synthetase; Validated 99.98
PRK14536490 cysS cysteinyl-tRNA synthetase; Provisional 99.97
PRK14534481 cysS cysteinyl-tRNA synthetase; Provisional 99.97
PRK14535699 cysS cysteinyl-tRNA synthetase; Provisional 99.97
COG0143558 MetG Methionyl-tRNA synthetase [Translation, ribos 99.97
TIGR00435465 cysS cysteinyl-tRNA synthetase. This model finds t 99.97
PRK12418384 cysteinyl-tRNA synthetase; Provisional 99.97
PF01406300 tRNA-synt_1e: tRNA synthetases class I (C) catalyt 99.97
TIGR03447411 mycothiol_MshC cysteine--1-D-myo-inosityl 2-amino- 99.96
PRK11893511 methionyl-tRNA synthetase; Reviewed 99.96
TIGR00398530 metG methionyl-tRNA synthetase. The methionyl-tRNA 99.96
KOG2007|consensus586 99.96
PRK00133673 metG methionyl-tRNA synthetase; Reviewed 99.95
PLN02224616 methionine-tRNA ligase 99.95
PRK12267648 methionyl-tRNA synthetase; Reviewed 99.95
PLN02610801 probable methionyl-tRNA synthetase 99.94
PRK12268556 methionyl-tRNA synthetase; Reviewed 99.94
KOG0436|consensus578 99.91
cd07956156 Anticodon_Ia_Arg Anticodon-binding domain of argin 99.9
cd00672213 CysRS_core catalytic core domain of cysteinyl tRNA 99.84
cd00668312 Ile_Leu_Val_MetRS_core catalytic core domain of is 99.84
cd00812314 LeuRS_core catalytic core domain of leucyl-tRNA sy 99.82
cd00814319 MetRS_core catalytic core domain of methioninyl-tR 99.82
PRK13208800 valS valyl-tRNA synthetase; Reviewed 99.82
TIGR00422861 valS valyl-tRNA synthetase. The valyl-tRNA synthet 99.78
cd00802143 class_I_aaRS_core catalytic core domain of class I 99.77
PRK149001052 valS valyl-tRNA synthetase; Provisional 99.77
cd00818338 IleRS_core catalytic core domain of isoleucyl-tRNA 99.77
PRK05729874 valS valyl-tRNA synthetase; Reviewed 99.76
cd00674353 LysRS_core_class_I catalytic core domain of class 99.74
PF05746119 DALR_1: DALR anticodon binding domain; InterPro: I 99.74
PF09334391 tRNA-synt_1g: tRNA synthetases class I (M); InterP 99.74
cd00817382 ValRS_core catalytic core domain of valyl-tRNA syn 99.73
TIGR00392861 ileS isoleucyl-tRNA synthetase. The isoleucyl tRNA 99.71
TIGR00464470 gltX_bact glutamyl-tRNA synthetase, bacterial fami 99.7
PRK01406476 gltX glutamyl-tRNA synthetase; Reviewed 99.66
PLN02943958 aminoacyl-tRNA ligase 99.66
PRK06039975 ileS isoleucyl-tRNA synthetase; Reviewed 99.66
smart00836122 DALR_1 DALR anticodon binding domain. This all alp 99.65
PF0348585 Arg_tRNA_synt_N: Arginyl tRNA synthetase N termina 99.63
PTZ00419995 valyl-tRNA synthetase-like protein; Provisional 99.63
PLN02882 1159 aminoacyl-tRNA ligase 99.62
COG0525877 ValS Valyl-tRNA synthetase [Translation, ribosomal 99.62
PRK05743912 ileS isoleucyl-tRNA synthetase; Reviewed 99.61
PRK14895513 gltX glutamyl-tRNA synthetase; Provisional 99.59
TIGR00395938 leuS_arch leucyl-tRNA synthetase, archaeal and cyt 99.57
PRK00750510 lysK lysyl-tRNA synthetase; Reviewed 99.55
PLN02381 1066 valyl-tRNA synthetase 99.51
cd00802143 class_I_aaRS_core catalytic core domain of class I 99.51
TIGR00467515 lysS_arch lysyl-tRNA synthetase, archaeal and spir 99.49
PRK12558445 glutamyl-tRNA synthetase; Provisional 99.49
PTZ00427 1205 isoleucine-tRNA ligase, putative; Provisional 99.45
PRK00390805 leuS leucyl-tRNA synthetase; Validated 99.43
TIGR00396842 leuS_bact leucyl-tRNA synthetase, eubacterial and 99.42
PF0348585 Arg_tRNA_synt_N: Arginyl tRNA synthetase N termina 99.41
TIGR00464 470 gltX_bact glutamyl-tRNA synthetase, bacterial fami 99.32
KOG1247|consensus567 99.32
PRK12410433 glutamylglutaminyl-tRNA synthetase; Provisional 99.31
PLN02627535 glutamyl-tRNA synthetase 99.31
PRK01406 476 gltX glutamyl-tRNA synthetase; Reviewed 99.27
cd00808239 GluRS_core catalytic core domain of discriminating 99.25
PRK14895 513 gltX glutamyl-tRNA synthetase; Provisional 99.25
cd09287240 GluRS_non_core catalytic core domain of non-discri 99.25
PRK13804961 ileS isoleucyl-tRNA synthetase; Provisional 99.22
PRK04156567 gltX glutamyl-tRNA synthetase; Provisional 99.21
KOG0432|consensus995 99.2
cd00418230 GlxRS_core catalytic core domain of glutamyl-tRNA 99.18
PLN02843974 isoleucyl-tRNA synthetase 99.15
PRK12300897 leuS leucyl-tRNA synthetase; Reviewed 99.13
PF00749314 tRNA-synt_1c: tRNA synthetases class I (E and Q), 99.11
PRK12558 445 glutamyl-tRNA synthetase; Provisional 99.06
TIGR03838272 queuosine_YadB glutamyl-queuosine tRNA(Asp) synthe 99.06
PRK00260463 cysS cysteinyl-tRNA synthetase; Validated 99.03
cd00808 239 GluRS_core catalytic core domain of discriminating 99.01
COG0008472 GlnS Glutamyl- and glutaminyl-tRNA synthetases [Tr 99.0
TIGR00435465 cysS cysteinyl-tRNA synthetase. This model finds t 99.0
cd00668312 Ile_Leu_Val_MetRS_core catalytic core domain of is 98.96
cd00814319 MetRS_core catalytic core domain of methioninyl-tR 98.93
cd00812314 LeuRS_core catalytic core domain of leucyl-tRNA sy 98.91
PRK05710299 glutamyl-Q tRNA(Asp) synthetase; Reviewed 98.91
PF00749314 tRNA-synt_1c: tRNA synthetases class I (E and Q), 98.9
TIGR03838272 queuosine_YadB glutamyl-queuosine tRNA(Asp) synthe 98.87
PRK12410 433 glutamylglutaminyl-tRNA synthetase; Provisional 98.81
COG1384521 LysS Lysyl-tRNA synthetase (class I) [Translation, 98.8
PF01921360 tRNA-synt_1f: tRNA synthetases class I (K); InterP 98.8
PRK05710299 glutamyl-Q tRNA(Asp) synthetase; Reviewed 98.79
PLN02627 535 glutamyl-tRNA synthetase 98.77
COG0060933 IleS Isoleucyl-tRNA synthetase [Translation, ribos 98.76
PLN03233523 putative glutamate-tRNA ligase; Provisional 98.76
PTZ00402601 glutamyl-tRNA synthetase; Provisional 98.75
COG0008 472 GlnS Glutamyl- and glutaminyl-tRNA synthetases [Tr 98.73
cd00807238 GlnRS_core catalytic core domain of glutaminyl-tRN 98.72
cd09287240 GluRS_non_core catalytic core domain of non-discri 98.71
PRK05347554 glutaminyl-tRNA synthetase; Provisional 98.66
cd00418 230 GlxRS_core catalytic core domain of glutamyl-tRNA 98.66
PLN02907722 glutamate-tRNA ligase 98.65
cd00674353 LysRS_core_class_I catalytic core domain of class 98.64
PRK11893 511 methionyl-tRNA synthetase; Reviewed 98.62
TIGR00463560 gltX_arch glutamyl-tRNA synthetase, archaeal and e 98.59
cd00818 338 IleRS_core catalytic core domain of isoleucyl-tRNA 98.58
PLN02224 616 methionine-tRNA ligase 98.56
KOG1149|consensus524 98.53
cd00807238 GlnRS_core catalytic core domain of glutaminyl-tRN 98.52
PRK12267 648 methionyl-tRNA synthetase; Reviewed 98.51
TIGR00398 530 metG methionyl-tRNA synthetase. The methionyl-tRNA 98.5
PLN02563963 aminoacyl-tRNA ligase 98.49
PLN03233 523 putative glutamate-tRNA ligase; Provisional 98.49
COG0495814 LeuS Leucyl-tRNA synthetase [Translation, ribosoma 98.43
cd00817 382 ValRS_core catalytic core domain of valyl-tRNA syn 98.42
TIGR00440522 glnS glutaminyl-tRNA synthetase. This protein is a 98.41
PRK04156 567 gltX glutamyl-tRNA synthetase; Provisional 98.41
PRK14703771 glutaminyl-tRNA synthetase/YqeY domain fusion prot 98.36
PLN02907 722 glutamate-tRNA ligase 98.35
PRK12268 556 methionyl-tRNA synthetase; Reviewed 98.34
PLN029591084 aminoacyl-tRNA ligase 98.33
PLN02859788 glutamine-tRNA ligase 98.31
PRK14534481 cysS cysteinyl-tRNA synthetase; Provisional 98.3
PLN02563963 aminoacyl-tRNA ligase 98.29
PF00133601 tRNA-synt_1: tRNA synthetases class I (I, L, M and 98.28
PRK05347 554 glutaminyl-tRNA synthetase; Provisional 98.27
PRK14536490 cysS cysteinyl-tRNA synthetase; Provisional 98.27
PRK13208 800 valS valyl-tRNA synthetase; Reviewed 98.26
COG0495814 LeuS Leucyl-tRNA synthetase [Translation, ribosoma 98.22
cd00672213 CysRS_core catalytic core domain of cysteinyl tRNA 98.2
PLN02946557 cysteine-tRNA ligase 98.2
PRK00133 673 metG methionyl-tRNA synthetase; Reviewed 98.18
TIGR00463 560 gltX_arch glutamyl-tRNA synthetase, archaeal and e 98.07
PLN02843 974 isoleucyl-tRNA synthetase 98.07
PRK00390 805 leuS leucyl-tRNA synthetase; Validated 98.06
PTZ00402 601 glutamyl-tRNA synthetase; Provisional 98.06
TIGR00396 842 leuS_bact leucyl-tRNA synthetase, eubacterial and 98.05
PLN02381 1066 valyl-tRNA synthetase 98.05
TIGR00422 861 valS valyl-tRNA synthetase. The valyl-tRNA synthet 98.05
PRK13804961 ileS isoleucyl-tRNA synthetase; Provisional 98.05
PF09334 391 tRNA-synt_1g: tRNA synthetases class I (M); InterP 98.03
PRK12418 384 cysteinyl-tRNA synthetase; Provisional 98.02
PTZ00419 995 valyl-tRNA synthetase-like protein; Provisional 98.0
PRK14703 771 glutaminyl-tRNA synthetase/YqeY domain fusion prot 97.99
TIGR00467515 lysS_arch lysyl-tRNA synthetase, archaeal and spir 97.97
PLN02943 958 aminoacyl-tRNA ligase 97.94
PF00133 601 tRNA-synt_1: tRNA synthetases class I (I, L, M and 97.94
PTZ00437574 glutaminyl-tRNA synthetase; Provisional 97.94
PRK14900 1052 valS valyl-tRNA synthetase; Provisional 97.92
PTZ00427 1205 isoleucine-tRNA ligase, putative; Provisional 97.9
PTZ00437 574 glutaminyl-tRNA synthetase; Provisional 97.9
PLN02610 801 probable methionyl-tRNA synthetase 97.9
TIGR00395 938 leuS_arch leucyl-tRNA synthetase, archaeal and cyt 97.89
COG0143 558 MetG Methionyl-tRNA synthetase [Translation, ribos 97.87
PRK00750510 lysK lysyl-tRNA synthetase; Reviewed 97.87
PRK05743 912 ileS isoleucyl-tRNA synthetase; Reviewed 97.86
PLN02882 1159 aminoacyl-tRNA ligase 97.83
PLN02959 1084 aminoacyl-tRNA ligase 97.81
TIGR03447 411 mycothiol_MshC cysteine--1-D-myo-inosityl 2-amino- 97.79
PRK05729 874 valS valyl-tRNA synthetase; Reviewed 97.79
TIGR00440 522 glnS glutaminyl-tRNA synthetase. This protein is a 97.74
TIGR00392 861 ileS isoleucyl-tRNA synthetase. The isoleucyl tRNA 97.74
PRK06039 975 ileS isoleucyl-tRNA synthetase; Reviewed 97.7
KOG0433|consensus937 97.69
COG0525 877 ValS Valyl-tRNA synthetase [Translation, ribosomal 97.66
PRK14535 699 cysS cysteinyl-tRNA synthetase; Provisional 97.65
PLN02859 788 glutamine-tRNA ligase 97.62
KOG0435|consensus876 97.57
PTZ00399 651 cysteinyl-tRNA-synthetase; Provisional 97.48
PF01406300 tRNA-synt_1e: tRNA synthetases class I (C) catalyt 97.46
PRK12300897 leuS leucyl-tRNA synthetase; Reviewed 97.44
COG0215464 CysS Cysteinyl-tRNA synthetase [Translation, ribos 97.39
KOG1149|consensus 524 97.15
KOG0432|consensus 995 96.61
COG0060933 IleS Isoleucyl-tRNA synthetase [Translation, ribos 96.61
TIGR00233328 trpS tryptophanyl-tRNA synthetase. This model repr 96.39
cd07957129 Anticodon_Ia_Met Anticodon-binding domain of methi 96.2
PRK13354410 tyrosyl-tRNA synthetase; Provisional 95.94
KOG0434|consensus1070 95.82
KOG0433|consensus937 95.04
cd07962135 Anticodon_Ia_Val Anticodon-binding domain of valyl 94.74
cd07958117 Anticodon_Ia_Leu_BEm Anticodon-binding domain of b 94.57
KOG0435|consensus 876 94.36
cd07375117 Anticodon_Ia_like Anticodon-binding domain of clas 93.88
cd07959117 Anticodon_Ia_Leu_AEc Anticodon-binding domain of a 93.87
KOG2007|consensus586 93.44
KOG1147|consensus 712 93.36
TIGR00234377 tyrS tyrosyl-tRNA synthetase. This tyrosyl-tRNA sy 93.07
COG0162401 TyrS Tyrosyl-tRNA synthetase [Translation, ribosom 92.68
PRK01233682 glyS glycyl-tRNA synthetase subunit beta; Validate 91.67
COG0180314 TrpS Tryptophanyl-tRNA synthetase [Translation, ri 91.26
TIGR00211691 glyS glycyl-tRNA synthetase, tetrameric type, beta 90.86
KOG0434|consensus 1070 90.28
cd00805269 TyrRS_core catalytic core domain of tyrosinyl-tRNA 90.19
PRK12556332 tryptophanyl-tRNA synthetase; Provisional 89.69
KOG0437|consensus1080 89.57
PRK12285368 tryptophanyl-tRNA synthetase; Reviewed 88.6
COG1384 521 LysS Lysyl-tRNA synthetase (class I) [Translation, 88.49
PF00579292 tRNA-synt_1b: tRNA synthetases class I (W and Y); 88.47
cd00395273 Tyr_Trp_RS_core catalytic core domain of tyrosinyl 87.83
PRK149081000 glycyl-tRNA synthetase; Provisional 87.57
cd07960180 Anticodon_Ia_Ile_BEm Anticodon-binding domain of b 87.55
PRK05912408 tyrosyl-tRNA synthetase; Validated 86.86
PRK08560329 tyrosyl-tRNA synthetase; Validated 86.66
PRK12284431 tryptophanyl-tRNA synthetase; Reviewed 86.18
COG0751691 GlyS Glycyl-tRNA synthetase, beta subunit [Transla 85.66
PF01921 360 tRNA-synt_1f: tRNA synthetases class I (K); InterP 85.63
cd00806280 TrpRS_core catalytic core domain of tryptophanyl-t 85.56
KOG0436|consensus578 84.18
PLN02486383 aminoacyl-tRNA ligase 81.58
PF08264153 Anticodon_1: Anticodon-binding domain of tRNA; Int 80.71
>KOG4426|consensus Back     alignment and domain information 
Probab=100.00  E-value=3.1e-111  Score=940.74  Aligned_cols=588  Identities=60%  Similarity=0.996  Sum_probs=556.7

Q ss_pred             ccccCHHHHHHHHHhhhhhhcccccCCcceeEeecCcccccccccchhchHHHHHHHHhhcCCCCChhhHHHHHHHhhcc
Q psy15414        472 RDRMSVRDYLSDVFTHAVQVAFPELGDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTS  551 (1458)
Q Consensus       472 gt~~~l~~~L~ell~dAi~~a~~~~~~~~v~v~~~~np~~~~~gDys~n~A~~Lak~l~~~g~~~~P~~IA~~i~~~i~~  551 (1458)
                      ..+.++...|.++++.|+..+++...+.|+.+.+++++   +||||+||.||.|++.++.+|++++|.+||++|..+   
T Consensus        68 ~~~~ni~~~L~~lF~~aik~a~Pd~~~vp~liaps~~~---kFGDYQCNnAMgl~~~lK~kg~~~~P~~va~~l~~~---  141 (656)
T KOG4426|consen   68 KFTSNIFRRLQSLFDVAIKLAFPDLPDVPLLIAPSPNA---KFGDYQCNNAMGLSSKLKGKGINKRPRDVAQELQKH---  141 (656)
T ss_pred             cccccHHHHHHHHHHHHHHHhCCCCCCCCceeccCccc---ccccccccchhhHHHHHhhcCCccCcHHHHHHHHhh---
Confidence            33457889999999999999999887788888888899   999999999999999999999999999999999999   


Q ss_pred             cccCCcccccceeEEEEeCCceEEEEeCHHHHHHHHHHHHHcCCCCCCCCCCceEEEEeeCCccCCccccchhhHHHHHH
Q psy15414        552 ELATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGEQIKDIIVNGVQPPTLNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGD  631 (1458)
Q Consensus       552 ~l~~~~~~~~~i~~vevagpGfiN~~l~~~~~~~~l~~i~~~g~~~~~~~~~~kV~VE~~SpNp~kplHIGHlRsaiIGD  631 (1458)
                       +|.+    +.|++++|+||||||++|+..|+.+.|..++.+|...|.+ ..++|+|+|||||++|.|||||+|||||||
T Consensus       142 -lP~s----e~vEk~~iagpGFiNv~Ls~d~~~~~i~nll~~GV~~P~l-~~KrvlVDFSSPNIAKeMHVGHLRSTIIGd  215 (656)
T KOG4426|consen  142 -LPTS----EMVEKCEIAGPGFINVFLSKDYMSKQISNLLVNGVKLPTL-SVKRVLVDFSSPNIAKEMHVGHLRSTIIGD  215 (656)
T ss_pred             -CCch----hhhhhhcccCCceEEEEechHHHHHHHHHHHHcCCCCccc-ceeeEEEecCCCcHHHHhhhhhhhhhhHhH
Confidence             9876    7999999999999999999999999999999999998776 458999999999999999999999999999


Q ss_pred             HHHHHHHHcCCcEEEEeecCCchhHHHHHHHHHHhhcCCCCCCCCChhHHHHHHHHhhhccCCcHHHHHHHHHHHHHHhc
Q psy15414        632 TISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDEDEIFKKRAYQCVVALQR  711 (1458)
Q Consensus       632 ~LaRil~~~Gy~V~r~~yInD~G~Qi~~l~~~~~~~~~~~~~~~~~i~~l~~iy~~~~~~~~~~~~~~~~a~~~~~~le~  711 (1458)
                      +|+|+|++.|++|.|.||+||||+||||+++++.++||++....+||.||+-+|++++.+|+++++|+++|++.+.++|.
T Consensus       216 sl~RllE~~~~dVlR~NHvGDWGTQFGMLIahL~dkFPd~l~vsp~IgDLQvFYkeSKkrFD~deeFKkrAyq~VV~LQg  295 (656)
T KOG4426|consen  216 SLCRLLEFSGVDVLRRNHVGDWGTQFGMLIAHLFDKFPDYLSVSPPIGDLQVFYKESKKRFDEDEEFKKRAYQAVVRLQG  295 (656)
T ss_pred             HHHHHHHhcCcceEeeccccchHHHHHHHHHHHHHhCCchhccCCCchhHHHHHHHHHhccCcCHHHHHHHHHHeeeccc
Confidence            99999999999999999999999999999999999999998888999999999999999999999999999999999999


Q ss_pred             CChhHHHHHHHHHHHHHHHHHHHHHHhCCEEecccccccchhHHHHHHHHHHcCCeEeeCCcEEEEcCCCCCCCcEEEcC
Q psy15414        712 FDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKHMEQLVPYLEKKGLLELDDGRKIMWGEDRGSIPMTIVKS  791 (1458)
Q Consensus       712 gd~e~~~lw~~~~~~s~~~f~~~y~~L~i~f~~~geS~~~~~v~~vi~~L~~kG~~ye~dGa~~~~~d~~d~~~~vL~ks  791 (1458)
                      |||..++.|..+|++|..+|.++|++|+|++.++|||||++.|.++++.|..+|++.++||+.++|.++++ .|.+++||
T Consensus       296 gdp~~~kAW~~ICdvSr~ef~kvY~rLdi~l~e~GESFYq~~m~~vveel~~kglvee~~Gr~i~f~~g~~-IPLtvVKS  374 (656)
T KOG4426|consen  296 GDPDIRKAWALICDVSRKEFQKVYNRLDISLKERGESFYQDRMAEVVEELKSKGLVEEDDGRRIMFPEGCD-IPLTVVKS  374 (656)
T ss_pred             CCChHHHHHHHHHHhhHHHHHHHHHHhcchHhhcchhhhhhHHHHHHHHHhcCCceeecCCceEeccCCCC-cceEEEec
Confidence            99999999999999999999999999999999999999999999999999999999999999999999988 89999999


Q ss_pred             CCCccCCCcchHHHHHHhhhcCCCeEEEEeeCCccccHHHHHHHHHHcCCCCCCcceEEEEEeEEEecCCCcccccccCC
Q psy15414        792 DGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGD  871 (1458)
Q Consensus       792 DGt~tY~trDiA~~~~k~~~~~~d~iIyVvg~dq~~hf~~l~~il~alG~~~~~~~~~~H~~fg~V~~~~G~KMSKR~Gn  871 (1458)
                      ||..||.|+|+|+.+||+.....|++|||++.+|..||..+|++++..||.+|...++.|++||+|++.+|+|+.||.|.
T Consensus       375 DGGftYdtsDlaAl~yRl~EEkadwiIYVvD~GQs~Hf~t~fkAar~~gwld~~~~RV~HvgFGlVLGeD~KkFkTRsge  454 (656)
T KOG4426|consen  375 DGGFTYDTSDLAALKYRLNEEKADWIIYVVDSGQSQHFNTIFKAARKAGWLDPTYPRVEHVGFGLVLGEDKKKFKTRSGE  454 (656)
T ss_pred             CCCcccccchHHHHHHHHHHhhcCeEEEEeeCchhHHHHHHHHHHHHcCccCCCccceeeeeeeeEEccCcccccccccc
Confidence            99999999999999999988899999999999999999999999999999888888999999999999999999999999


Q ss_pred             ccchHHHHHHHHHHHHHHHhhcCCCCCCChhhhHHHHHhhhhhheeeeeecCCCCCccccchhhHHhhhcCcHHHHHHHH
Q psy15414        872 TVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAY  951 (1458)
Q Consensus       872 vI~l~DLLde~~~~a~~~~~~~~~~~~~~~ee~~~~ad~v~~~alRy~lLs~~~~~d~~Fd~d~~l~~n~n~g~ylqYa~  951 (1458)
                      +|.+-|||+|+..|+.+.+.++|++..++|||+.+.++++++++|+|.+|+++|.+||.||+|+|++-.|||+.|+.|||
T Consensus       455 tVrL~DLLdEg~kRs~~~Liergrdk~~tpeeL~~a~eavayGciKYaDL~hnR~~dY~FSFDkML~DrGnTAvYLLYa~  534 (656)
T KOG4426|consen  455 TVRLLDLLDEGKKRSKEKLIERGRDKVLTPEELDAAQEAVAYGCIKYADLSHNRITDYIFSFDKMLEDRGNTAVYLLYAY  534 (656)
T ss_pred             eeeHHHHHHHHHHHHHHHHHHhcccccCCHHHHHHHHHHHHhcchhHhhhccccccceeeeHHHHhhccCcceehhHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhCCCcchhhh-hccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHhhhhhccc
Q psy15414        952 TRIASIARTAGINSEDLRV-AAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCYC 1030 (1458)
Q Consensus       952 aRi~SIlrK~~~~~~~i~~-~~~~~~~~l~~~~e~~Ll~~l~~f~~~v~~a~~~~~p~~l~~yL~~LA~~fN~fy~~~~v 1030 (1458)
                      +|||||.||.+.....++. ....+...|.|+.||+|.+.+.+|++.+..+.+++-||.+|+|+|+||..|..||++|-+
T Consensus       535 tRIcSI~rksg~d~~~l~~~lkkT~ki~LDH~~E~kLg~~lLkf~e~v~~~~~~L~lh~lC~y~y~l~t~Ft~FY~~Cyv  614 (656)
T KOG4426|consen  535 TRICSIARKSGKDNVDLIKELKKTGKIALDHEKEWKLGKHLLKFAEIVEKALDSLFLHVLCDYLYELATLFTEFYDSCYV  614 (656)
T ss_pred             HHHHHHHHHcCCchhhHHHHHHhcCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccEE
Confidence            9999999999765322222 112234568899999999999999999999999999999999999999999999999998


Q ss_pred             cccccccccccchhHHHHHHHHHHHHHHHHhhhcccccchhh
Q psy15414       1031 IEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNIRTAIAE 1072 (1458)
Q Consensus      1031 L~k~~~~~~~~~~~aRL~L~~av~~VL~~gL~LLGI~~~e~m 1072 (1458)
                      ..++.+++.+.+...||+||+|+..|++.|+.+|||.|+.+|
T Consensus       615 ~e~~~eg~i~~vn~sRllLCeata~VmrkcF~iLGi~pV~km  656 (656)
T KOG4426|consen  615 IEKNKEGEIPFVNMSRLLLCEATAAVMRKCFHILGIKPVYKM  656 (656)
T ss_pred             eccccccccccchhHHHHHHHHHHHHHHHhhHhhCCcccccC
Confidence            877766777888999999999999999999999999998776

>COG0018 ArgS Arginyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PLN02286 arginine-tRNA ligase Back     alignment and domain information
>PRK12451 arginyl-tRNA synthetase; Reviewed Back     alignment and domain information
>KOG4426|consensus Back     alignment and domain information
>TIGR00456 argS arginyl-tRNA synthetase Back     alignment and domain information
>PRK01611 argS arginyl-tRNA synthetase; Reviewed Back     alignment and domain information
>KOG1195|consensus Back     alignment and domain information
>COG0018 ArgS Arginyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PLN02286 arginine-tRNA ligase Back     alignment and domain information
>PRK12451 arginyl-tRNA synthetase; Reviewed Back     alignment and domain information
>TIGR00456 argS arginyl-tRNA synthetase Back     alignment and domain information
>PF00750 tRNA-synt_1d: tRNA synthetases class I (R); InterPro: IPR015945 The aminoacyl-tRNA synthetases (6 Back     alignment and domain information
>PF00750 tRNA-synt_1d: tRNA synthetases class I (R); InterPro: IPR015945 The aminoacyl-tRNA synthetases (6 Back     alignment and domain information
>PRK01611 argS arginyl-tRNA synthetase; Reviewed Back     alignment and domain information
>KOG1195|consensus Back     alignment and domain information
>cd00671 ArgRS_core catalytic core domain of arginyl-tRNA synthetases Back     alignment and domain information
>cd00671 ArgRS_core catalytic core domain of arginyl-tRNA synthetases Back     alignment and domain information
>PTZ00399 cysteinyl-tRNA-synthetase; Provisional Back     alignment and domain information
>PLN02946 cysteine-tRNA ligase Back     alignment and domain information
>COG0215 CysS Cysteinyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PRK00260 cysS cysteinyl-tRNA synthetase; Validated Back     alignment and domain information
>PRK14536 cysS cysteinyl-tRNA synthetase; Provisional Back     alignment and domain information
>PRK14534 cysS cysteinyl-tRNA synthetase; Provisional Back     alignment and domain information
>PRK14535 cysS cysteinyl-tRNA synthetase; Provisional Back     alignment and domain information
>COG0143 MetG Methionyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>TIGR00435 cysS cysteinyl-tRNA synthetase Back     alignment and domain information
>PRK12418 cysteinyl-tRNA synthetase; Provisional Back     alignment and domain information
>PF01406 tRNA-synt_1e: tRNA synthetases class I (C) catalytic domain; InterPro: IPR015803 The aminoacyl-tRNA synthetases (6 Back     alignment and domain information
>TIGR03447 mycothiol_MshC cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside ligase Back     alignment and domain information
>PRK11893 methionyl-tRNA synthetase; Reviewed Back     alignment and domain information
>TIGR00398 metG methionyl-tRNA synthetase Back     alignment and domain information
>KOG2007|consensus Back     alignment and domain information
>PRK00133 metG methionyl-tRNA synthetase; Reviewed Back     alignment and domain information
>PLN02224 methionine-tRNA ligase Back     alignment and domain information
>PRK12267 methionyl-tRNA synthetase; Reviewed Back     alignment and domain information
>PLN02610 probable methionyl-tRNA synthetase Back     alignment and domain information
>PRK12268 methionyl-tRNA synthetase; Reviewed Back     alignment and domain information
>KOG0436|consensus Back     alignment and domain information
>cd07956 Anticodon_Ia_Arg Anticodon-binding domain of arginyl tRNA synthetases Back     alignment and domain information
>cd00672 CysRS_core catalytic core domain of cysteinyl tRNA synthetase Back     alignment and domain information
>cd00668 Ile_Leu_Val_MetRS_core catalytic core domain of isoleucyl, leucyl, valyl and methioninyl tRNA synthetases Back     alignment and domain information
>cd00812 LeuRS_core catalytic core domain of leucyl-tRNA synthetases Back     alignment and domain information
>cd00814 MetRS_core catalytic core domain of methioninyl-tRNA synthetases Back     alignment and domain information
>PRK13208 valS valyl-tRNA synthetase; Reviewed Back     alignment and domain information
>TIGR00422 valS valyl-tRNA synthetase Back     alignment and domain information
>cd00802 class_I_aaRS_core catalytic core domain of class I amino acyl-tRNA synthetase Back     alignment and domain information
>PRK14900 valS valyl-tRNA synthetase; Provisional Back     alignment and domain information
>cd00818 IleRS_core catalytic core domain of isoleucyl-tRNA synthetases Back     alignment and domain information
>PRK05729 valS valyl-tRNA synthetase; Reviewed Back     alignment and domain information
>cd00674 LysRS_core_class_I catalytic core domain of class I lysyl tRNA synthetase Back     alignment and domain information
>PF05746 DALR_1: DALR anticodon binding domain; InterPro: IPR008909 The aminoacyl-tRNA synthetases (6 Back     alignment and domain information
>PF09334 tRNA-synt_1g: tRNA synthetases class I (M); InterPro: IPR015413 The aminoacyl-tRNA synthetases (6 Back     alignment and domain information
>cd00817 ValRS_core catalytic core domain of valyl-tRNA synthetases Back     alignment and domain information
>TIGR00392 ileS isoleucyl-tRNA synthetase Back     alignment and domain information
>TIGR00464 gltX_bact glutamyl-tRNA synthetase, bacterial family Back     alignment and domain information
>PRK01406 gltX glutamyl-tRNA synthetase; Reviewed Back     alignment and domain information
>PLN02943 aminoacyl-tRNA ligase Back     alignment and domain information
>PRK06039 ileS isoleucyl-tRNA synthetase; Reviewed Back     alignment and domain information
>smart00836 DALR_1 DALR anticodon binding domain Back     alignment and domain information
>PF03485 Arg_tRNA_synt_N: Arginyl tRNA synthetase N terminal domain; InterPro: IPR005148 The aminoacyl-tRNA synthetases (6 Back     alignment and domain information
>PTZ00419 valyl-tRNA synthetase-like protein; Provisional Back     alignment and domain information
>PLN02882 aminoacyl-tRNA ligase Back     alignment and domain information
>COG0525 ValS Valyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PRK05743 ileS isoleucyl-tRNA synthetase; Reviewed Back     alignment and domain information
>PRK14895 gltX glutamyl-tRNA synthetase; Provisional Back     alignment and domain information
>TIGR00395 leuS_arch leucyl-tRNA synthetase, archaeal and cytosolic family Back     alignment and domain information
>PRK00750 lysK lysyl-tRNA synthetase; Reviewed Back     alignment and domain information
>PLN02381 valyl-tRNA synthetase Back     alignment and domain information
>cd00802 class_I_aaRS_core catalytic core domain of class I amino acyl-tRNA synthetase Back     alignment and domain information
>TIGR00467 lysS_arch lysyl-tRNA synthetase, archaeal and spirochete Back     alignment and domain information
>PRK12558 glutamyl-tRNA synthetase; Provisional Back     alignment and domain information
>PTZ00427 isoleucine-tRNA ligase, putative; Provisional Back     alignment and domain information
>PRK00390 leuS leucyl-tRNA synthetase; Validated Back     alignment and domain information
>TIGR00396 leuS_bact leucyl-tRNA synthetase, eubacterial and mitochondrial family Back     alignment and domain information
>PF03485 Arg_tRNA_synt_N: Arginyl tRNA synthetase N terminal domain; InterPro: IPR005148 The aminoacyl-tRNA synthetases (6 Back     alignment and domain information
>TIGR00464 gltX_bact glutamyl-tRNA synthetase, bacterial family Back     alignment and domain information
>KOG1247|consensus Back     alignment and domain information
>PRK12410 glutamylglutaminyl-tRNA synthetase; Provisional Back     alignment and domain information
>PLN02627 glutamyl-tRNA synthetase Back     alignment and domain information
>PRK01406 gltX glutamyl-tRNA synthetase; Reviewed Back     alignment and domain information
>cd00808 GluRS_core catalytic core domain of discriminating glutamyl-tRNA synthetase Back     alignment and domain information
>PRK14895 gltX glutamyl-tRNA synthetase; Provisional Back     alignment and domain information
>cd09287 GluRS_non_core catalytic core domain of non-discriminating glutamyl-tRNA synthetase Back     alignment and domain information
>PRK13804 ileS isoleucyl-tRNA synthetase; Provisional Back     alignment and domain information
>PRK04156 gltX glutamyl-tRNA synthetase; Provisional Back     alignment and domain information
>KOG0432|consensus Back     alignment and domain information
>cd00418 GlxRS_core catalytic core domain of glutamyl-tRNA and glutaminyl-tRNA synthetase Back     alignment and domain information
>PLN02843 isoleucyl-tRNA synthetase Back     alignment and domain information
>PRK12300 leuS leucyl-tRNA synthetase; Reviewed Back     alignment and domain information
>PF00749 tRNA-synt_1c: tRNA synthetases class I (E and Q), catalytic domain; InterPro: IPR020058 The aminoacyl-tRNA synthetases (6 Back     alignment and domain information
>PRK12558 glutamyl-tRNA synthetase; Provisional Back     alignment and domain information
>TIGR03838 queuosine_YadB glutamyl-queuosine tRNA(Asp) synthetase Back     alignment and domain information
>PRK00260 cysS cysteinyl-tRNA synthetase; Validated Back     alignment and domain information
>cd00808 GluRS_core catalytic core domain of discriminating glutamyl-tRNA synthetase Back     alignment and domain information
>COG0008 GlnS Glutamyl- and glutaminyl-tRNA synthetases [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>TIGR00435 cysS cysteinyl-tRNA synthetase Back     alignment and domain information
>cd00668 Ile_Leu_Val_MetRS_core catalytic core domain of isoleucyl, leucyl, valyl and methioninyl tRNA synthetases Back     alignment and domain information
>cd00814 MetRS_core catalytic core domain of methioninyl-tRNA synthetases Back     alignment and domain information
>cd00812 LeuRS_core catalytic core domain of leucyl-tRNA synthetases Back     alignment and domain information
>PRK05710 glutamyl-Q tRNA(Asp) synthetase; Reviewed Back     alignment and domain information
>PF00749 tRNA-synt_1c: tRNA synthetases class I (E and Q), catalytic domain; InterPro: IPR020058 The aminoacyl-tRNA synthetases (6 Back     alignment and domain information
>TIGR03838 queuosine_YadB glutamyl-queuosine tRNA(Asp) synthetase Back     alignment and domain information
>PRK12410 glutamylglutaminyl-tRNA synthetase; Provisional Back     alignment and domain information
>COG1384 LysS Lysyl-tRNA synthetase (class I) [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PF01921 tRNA-synt_1f: tRNA synthetases class I (K); InterPro: IPR002904 The aminoacyl-tRNA synthetases (6 Back     alignment and domain information
>PRK05710 glutamyl-Q tRNA(Asp) synthetase; Reviewed Back     alignment and domain information
>PLN02627 glutamyl-tRNA synthetase Back     alignment and domain information
>COG0060 IleS Isoleucyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PLN03233 putative glutamate-tRNA ligase; Provisional Back     alignment and domain information
>PTZ00402 glutamyl-tRNA synthetase; Provisional Back     alignment and domain information
>COG0008 GlnS Glutamyl- and glutaminyl-tRNA synthetases [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>cd00807 GlnRS_core catalytic core domain of glutaminyl-tRNA synthetase Back     alignment and domain information
>cd09287 GluRS_non_core catalytic core domain of non-discriminating glutamyl-tRNA synthetase Back     alignment and domain information
>PRK05347 glutaminyl-tRNA synthetase; Provisional Back     alignment and domain information
>cd00418 GlxRS_core catalytic core domain of glutamyl-tRNA and glutaminyl-tRNA synthetase Back     alignment and domain information
>PLN02907 glutamate-tRNA ligase Back     alignment and domain information
>cd00674 LysRS_core_class_I catalytic core domain of class I lysyl tRNA synthetase Back     alignment and domain information
>PRK11893 methionyl-tRNA synthetase; Reviewed Back     alignment and domain information
>TIGR00463 gltX_arch glutamyl-tRNA synthetase, archaeal and eukaryotic family Back     alignment and domain information
>cd00818 IleRS_core catalytic core domain of isoleucyl-tRNA synthetases Back     alignment and domain information
>PLN02224 methionine-tRNA ligase Back     alignment and domain information
>KOG1149|consensus Back     alignment and domain information
>cd00807 GlnRS_core catalytic core domain of glutaminyl-tRNA synthetase Back     alignment and domain information
>PRK12267 methionyl-tRNA synthetase; Reviewed Back     alignment and domain information
>TIGR00398 metG methionyl-tRNA synthetase Back     alignment and domain information
>PLN02563 aminoacyl-tRNA ligase Back     alignment and domain information
>PLN03233 putative glutamate-tRNA ligase; Provisional Back     alignment and domain information
>COG0495 LeuS Leucyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>cd00817 ValRS_core catalytic core domain of valyl-tRNA synthetases Back     alignment and domain information
>TIGR00440 glnS glutaminyl-tRNA synthetase Back     alignment and domain information
>PRK04156 gltX glutamyl-tRNA synthetase; Provisional Back     alignment and domain information
>PRK14703 glutaminyl-tRNA synthetase/YqeY domain fusion protein; Provisional Back     alignment and domain information
>PLN02907 glutamate-tRNA ligase Back     alignment and domain information
>PRK12268 methionyl-tRNA synthetase; Reviewed Back     alignment and domain information
>PLN02959 aminoacyl-tRNA ligase Back     alignment and domain information
>PLN02859 glutamine-tRNA ligase Back     alignment and domain information
>PRK14534 cysS cysteinyl-tRNA synthetase; Provisional Back     alignment and domain information
>PLN02563 aminoacyl-tRNA ligase Back     alignment and domain information
>PF00133 tRNA-synt_1: tRNA synthetases class I (I, L, M and V); InterPro: IPR002300 The aminoacyl-tRNA synthetases (6 Back     alignment and domain information
>PRK05347 glutaminyl-tRNA synthetase; Provisional Back     alignment and domain information
>PRK14536 cysS cysteinyl-tRNA synthetase; Provisional Back     alignment and domain information
>PRK13208 valS valyl-tRNA synthetase; Reviewed Back     alignment and domain information
>COG0495 LeuS Leucyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>cd00672 CysRS_core catalytic core domain of cysteinyl tRNA synthetase Back     alignment and domain information
>PLN02946 cysteine-tRNA ligase Back     alignment and domain information
>PRK00133 metG methionyl-tRNA synthetase; Reviewed Back     alignment and domain information
>TIGR00463 gltX_arch glutamyl-tRNA synthetase, archaeal and eukaryotic family Back     alignment and domain information
>PLN02843 isoleucyl-tRNA synthetase Back     alignment and domain information
>PRK00390 leuS leucyl-tRNA synthetase; Validated Back     alignment and domain information
>PTZ00402 glutamyl-tRNA synthetase; Provisional Back     alignment and domain information
>TIGR00396 leuS_bact leucyl-tRNA synthetase, eubacterial and mitochondrial family Back     alignment and domain information
>PLN02381 valyl-tRNA synthetase Back     alignment and domain information
>TIGR00422 valS valyl-tRNA synthetase Back     alignment and domain information
>PRK13804 ileS isoleucyl-tRNA synthetase; Provisional Back     alignment and domain information
>PF09334 tRNA-synt_1g: tRNA synthetases class I (M); InterPro: IPR015413 The aminoacyl-tRNA synthetases (6 Back     alignment and domain information
>PRK12418 cysteinyl-tRNA synthetase; Provisional Back     alignment and domain information
>PTZ00419 valyl-tRNA synthetase-like protein; Provisional Back     alignment and domain information
>PRK14703 glutaminyl-tRNA synthetase/YqeY domain fusion protein; Provisional Back     alignment and domain information
>TIGR00467 lysS_arch lysyl-tRNA synthetase, archaeal and spirochete Back     alignment and domain information
>PLN02943 aminoacyl-tRNA ligase Back     alignment and domain information
>PF00133 tRNA-synt_1: tRNA synthetases class I (I, L, M and V); InterPro: IPR002300 The aminoacyl-tRNA synthetases (6 Back     alignment and domain information
>PTZ00437 glutaminyl-tRNA synthetase; Provisional Back     alignment and domain information
>PRK14900 valS valyl-tRNA synthetase; Provisional Back     alignment and domain information
>PTZ00427 isoleucine-tRNA ligase, putative; Provisional Back     alignment and domain information
>PTZ00437 glutaminyl-tRNA synthetase; Provisional Back     alignment and domain information
>PLN02610 probable methionyl-tRNA synthetase Back     alignment and domain information
>TIGR00395 leuS_arch leucyl-tRNA synthetase, archaeal and cytosolic family Back     alignment and domain information
>COG0143 MetG Methionyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PRK00750 lysK lysyl-tRNA synthetase; Reviewed Back     alignment and domain information
>PRK05743 ileS isoleucyl-tRNA synthetase; Reviewed Back     alignment and domain information
>PLN02882 aminoacyl-tRNA ligase Back     alignment and domain information
>PLN02959 aminoacyl-tRNA ligase Back     alignment and domain information
>TIGR03447 mycothiol_MshC cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside ligase Back     alignment and domain information
>PRK05729 valS valyl-tRNA synthetase; Reviewed Back     alignment and domain information
>TIGR00440 glnS glutaminyl-tRNA synthetase Back     alignment and domain information
>TIGR00392 ileS isoleucyl-tRNA synthetase Back     alignment and domain information
>PRK06039 ileS isoleucyl-tRNA synthetase; Reviewed Back     alignment and domain information
>KOG0433|consensus Back     alignment and domain information
>COG0525 ValS Valyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PRK14535 cysS cysteinyl-tRNA synthetase; Provisional Back     alignment and domain information
>PLN02859 glutamine-tRNA ligase Back     alignment and domain information
>KOG0435|consensus Back     alignment and domain information
>PTZ00399 cysteinyl-tRNA-synthetase; Provisional Back     alignment and domain information
>PF01406 tRNA-synt_1e: tRNA synthetases class I (C) catalytic domain; InterPro: IPR015803 The aminoacyl-tRNA synthetases (6 Back     alignment and domain information
>PRK12300 leuS leucyl-tRNA synthetase; Reviewed Back     alignment and domain information
>COG0215 CysS Cysteinyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>KOG1149|consensus Back     alignment and domain information
>KOG0432|consensus Back     alignment and domain information
>COG0060 IleS Isoleucyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>TIGR00233 trpS tryptophanyl-tRNA synthetase Back     alignment and domain information
>cd07957 Anticodon_Ia_Met Anticodon-binding domain of methionyl tRNA synthetases Back     alignment and domain information
>PRK13354 tyrosyl-tRNA synthetase; Provisional Back     alignment and domain information
>KOG0434|consensus Back     alignment and domain information
>KOG0433|consensus Back     alignment and domain information
>cd07962 Anticodon_Ia_Val Anticodon-binding domain of valyl tRNA synthetases Back     alignment and domain information
>cd07958 Anticodon_Ia_Leu_BEm Anticodon-binding domain of bacterial and eukaryotic mitochondrial leucyl tRNA synthetases Back     alignment and domain information
>KOG0435|consensus Back     alignment and domain information
>cd07375 Anticodon_Ia_like Anticodon-binding domain of class Ia aminoacyl tRNA synthetases and similar domains Back     alignment and domain information
>cd07959 Anticodon_Ia_Leu_AEc Anticodon-binding domain of archaeal and eukaryotic cytoplasmic leucyl tRNA synthetases Back     alignment and domain information
>KOG2007|consensus Back     alignment and domain information
>KOG1147|consensus Back     alignment and domain information
>TIGR00234 tyrS tyrosyl-tRNA synthetase Back     alignment and domain information
>COG0162 TyrS Tyrosyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PRK01233 glyS glycyl-tRNA synthetase subunit beta; Validated Back     alignment and domain information
>COG0180 TrpS Tryptophanyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>TIGR00211 glyS glycyl-tRNA synthetase, tetrameric type, beta subunit Back     alignment and domain information
>KOG0434|consensus Back     alignment and domain information
>cd00805 TyrRS_core catalytic core domain of tyrosinyl-tRNA synthetase Back     alignment and domain information
>PRK12556 tryptophanyl-tRNA synthetase; Provisional Back     alignment and domain information
>KOG0437|consensus Back     alignment and domain information
>PRK12285 tryptophanyl-tRNA synthetase; Reviewed Back     alignment and domain information
>COG1384 LysS Lysyl-tRNA synthetase (class I) [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PF00579 tRNA-synt_1b: tRNA synthetases class I (W and Y); InterPro: IPR002305 The aminoacyl-tRNA synthetases (6 Back     alignment and domain information
>cd00395 Tyr_Trp_RS_core catalytic core domain of tyrosinyl-tRNA and tryptophanyl-tRNA synthetase Back     alignment and domain information
>PRK14908 glycyl-tRNA synthetase; Provisional Back     alignment and domain information
>cd07960 Anticodon_Ia_Ile_BEm Anticodon-binding domain of bacterial and eukaryotic mitochondrial isoleucyl tRNA synthetases Back     alignment and domain information
>PRK05912 tyrosyl-tRNA synthetase; Validated Back     alignment and domain information
>PRK08560 tyrosyl-tRNA synthetase; Validated Back     alignment and domain information
>PRK12284 tryptophanyl-tRNA synthetase; Reviewed Back     alignment and domain information
>COG0751 GlyS Glycyl-tRNA synthetase, beta subunit [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PF01921 tRNA-synt_1f: tRNA synthetases class I (K); InterPro: IPR002904 The aminoacyl-tRNA synthetases (6 Back     alignment and domain information
>cd00806 TrpRS_core catalytic core domain of tryptophanyl-tRNA synthetase Back     alignment and domain information
>KOG0436|consensus Back     alignment and domain information
>PLN02486 aminoacyl-tRNA ligase Back     alignment and domain information
>PF08264 Anticodon_1: Anticodon-binding domain of tRNA; InterPro: IPR013155 The aminoacyl-tRNA synthetases (6 Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query1458
1bs2_A607 Yeast Arginyl-Trna Synthetase Length = 607 1e-36
1bs2_A 607 Yeast Arginyl-Trna Synthetase Length = 607 3e-21
2zue_A629 Crystal Structure Of Pyrococcus Horikoshii Arginyl- 2e-12
2zue_A629 Crystal Structure Of Pyrococcus Horikoshii Arginyl- 2e-12
2zue_A 629 Crystal Structure Of Pyrococcus Horikoshii Arginyl- 2e-12
3fnr_A464 Crystal Structure Of Putative Arginyl T-Rna Synthet 2e-09
3fnr_A 464 Crystal Structure Of Putative Arginyl T-Rna Synthet 5e-08
1iq0_A592 Thermus Thermophilus Arginyl-Trna Synthetase Length 2e-08
1iq0_A 592 Thermus Thermophilus Arginyl-Trna Synthetase Length 3e-08
>pdb|1BS2|A Chain A, Yeast Arginyl-Trna Synthetase Length = 607 Back     alignment and structure 
Iteration: 1

 Score =  152 bits (384), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 147/526 (27%), Positives = 237/526 (45%), Gaps = 46/526 (8%)
Query: 563  IDKIEVAKPGFVNVFLSRVYAGEQIKDIIVN----GVQPPTLNKKLRVLVDFSSPNIAKE 618
            ++K+E   P     F  +  A   I DI+      G      NKK  V+++FSSPNIAK 
Sbjct: 100  LEKVEANGPFIQFFFNPQFLAKLVIPDILTRKEDYGSCKLVENKK--VIIEFSSPNIAKP 157
Query: 619  MHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPI 678
             H GHLRSTIIG  ++ L E LG +V+R+N++GDWG QFG+L    +    +      PI
Sbjct: 158  FHAGHLRSTIIGGFLANLYEKLGWEVIRMNYLGDWGKQFGLLAVGFERYGNEEALVKDPI 217
Query: 679  ADLQAFYKESKKRFDE-------DEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDF 731
              L   Y    K  +E       ++    +A +    ++  D +  K W+   + S   +
Sbjct: 218  HHLFDVYVRINKDIEEEGDSIPLEQSTNGKAREYFKRMEDGDEEALKIWKRFREFSIEKY 277
Query: 732  QKIYDRLNVTL-TERGESFYQKH-MEQLVPYLEKKGLLELDDGRKIM----WGEDRGSIP 785
               Y RLN+      GES   K  M + +   ++KGL   D G  ++    + +  G   
Sbjct: 278  IDTYARLNIKYDVYSGESQVSKESMLKAIDLFKEKGLTHEDKGAVLIDLTKFNKKLGK-- 335
Query: 786  MTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPN 845
              + KSDG   Y T D+ A   R E+   D ++YV    Q +H     E  K+ G     
Sbjct: 336  AIVQKSDGTTLYLTRDVGAAMDRYEKYHFDKMIYVIASQQDLHAAQFFEILKQMGF--EW 393
Query: 846  KTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKL-KDKNRHTELTPTEL 904
               +  V FG+V G       TR G  V L  +L+E   +  + + K++N++ ++   E 
Sbjct: 394  AKDLQHVNFGMVQG-----MSTRKGTVVFLDNILEETKEKMHEVMKKNENKYAQIEHPE- 447
Query: 905  SEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGIN 964
             E    V    +   D+   R  +Y F +++ML   G+T  YL YA++R+ S+ R A   
Sbjct: 448  -EVADLVGISAVMIQDMQGKRINNYEFKWERMLSFEGDTGPYLQYAHSRLRSVERNASGI 506
Query: 965  SEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHH----LCEYLYDISTA 1020
            +++  + A  + +     KE A AK L+R+      V R+    H    +  YL+ ++  
Sbjct: 507  TQEKWINADFSLL-----KEPA-AKLLIRLLGQYPDVLRNAIKTHEPTTVVTYLFKLTHQ 560
Query: 1021 FSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNI 1066
             S  YD  +       G+ + + T RL L  A  +V+     +L +
Sbjct: 561  VSSCYDVLWV-----AGQTEELATARLALYGAARQVLYNGMRLLGL 601
>pdb|1BS2|A Chain A, Yeast Arginyl-Trna Synthetase Length = 607 Back     alignment and structure
>pdb|2ZUE|A Chain A, Crystal Structure Of Pyrococcus Horikoshii Arginyl-Trna Synthetase Complexed With Trna(Arg) And An Atp Analog (Anp) Length = 629 Back     alignment and structure
>pdb|2ZUE|A Chain A, Crystal Structure Of Pyrococcus Horikoshii Arginyl-Trna Synthetase Complexed With Trna(Arg) And An Atp Analog (Anp) Length = 629 Back     alignment and structure
>pdb|2ZUE|A Chain A, Crystal Structure Of Pyrococcus Horikoshii Arginyl-Trna Synthetase Complexed With Trna(Arg) And An Atp Analog (Anp) Length = 629 Back     alignment and structure
>pdb|3FNR|A Chain A, Crystal Structure Of Putative Arginyl T-Rna Synthetase From Campylobacter Jejuni Length = 464 Back     alignment and structure
>pdb|3FNR|A Chain A, Crystal Structure Of Putative Arginyl T-Rna Synthetase From Campylobacter Jejuni Length = 464 Back     alignment and structure
>pdb|1IQ0|A Chain A, Thermus Thermophilus Arginyl-Trna Synthetase Length = 592 Back     alignment and structure
>pdb|1IQ0|A Chain A, Thermus Thermophilus Arginyl-Trna Synthetase Length = 592 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query1458
1f7u_A607 Arginyl-tRNA synthetase; RNA-protein complex, amin 0.0
1f7u_A607 Arginyl-tRNA synthetase; RNA-protein complex, amin 1e-120
1f7u_A 607 Arginyl-tRNA synthetase; RNA-protein complex, amin 1e-120
2zue_A629 Arginyl-tRNA synthetase; aminoacyl-tRNA synthetase 0.0
2zue_A629 Arginyl-tRNA synthetase; aminoacyl-tRNA synthetase 1e-99
2zue_A 629 Arginyl-tRNA synthetase; aminoacyl-tRNA synthetase 9e-99
1iq0_A592 Arginyl-tRNA synthetase; riken structural genomics 1e-174
1iq0_A592 Arginyl-tRNA synthetase; riken structural genomics 1e-89
1iq0_A 592 Arginyl-tRNA synthetase; riken structural genomics 8e-89
3fnr_A464 Arginyl-tRNA synthetase; transferase, PSI-2, NYSGX 6e-35
3fnr_A464 Arginyl-tRNA synthetase; transferase, PSI-2, NYSGX 1e-14
3fnr_A 464 Arginyl-tRNA synthetase; transferase, PSI-2, NYSGX 1e-14
3gdz_A109 Arginyl-tRNA synthetase; klebsiella pneumoniae sub 4e-22
3gdz_A109 Arginyl-tRNA synthetase; klebsiella pneumoniae sub 4e-22
3gdz_A109 Arginyl-tRNA synthetase; klebsiella pneumoniae sub 4e-22
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 5e-13
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-11
1vt4_I1221 APAF-1 related killer DARK; drosophila apoptosome, 5e-10
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-07
>1f7u_A Arginyl-tRNA synthetase; RNA-protein complex, aminoacylation; HET: PSU 1MG 2MG H2U M2G 5MC 5MU 1MA ARG; 2.20A {Saccharomyces cerevisiae} SCOP: a.27.1.1 c.26.1.1 d.67.2.1 PDB: 1bs2_A* 1f7v_A* Length = 607 Back     alignment and structure
 Score =  638 bits (1647), Expect = 0.0
 Identities = 155/639 (24%), Positives = 261/639 (40%), Gaps = 59/639 (9%)

Query: 446  EEKKQGISSSSSSQTKGTAKKMNVPVRDRMSVRDYLSDVFTHAVQVAFPELGDKTASVAS 505
              + + +S +  +  K +   +N+    R  +   LS +      + FP L        +
Sbjct: 8    ISQLKKLSIAEPAVAKDSHPDVNIVDLMRNYISQELSKISGVDSSLIFPAL------EWT 61

Query: 506  TNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSELATNPSLAKVIDK 565
               +     GD               + +  NP D+A   A     +          ++K
Sbjct: 62   NTME----RGDLLIPIPRL-------RIKGANPKDLAVQWAE----KFPCGD----FLEK 102

Query: 566  IEVAKPGFVNVFLSRVYAGEQIKDIIVN-----GVQPPTLNKKLRVLVDFSSPNIAKEMH 620
            +E   P F+  F +  +  + +   I+      G      NKK  V+++FSSPNIAK  H
Sbjct: 103  VEANGP-FIQFFFNPQFLAKLVIPDILTRKEDYGSCKLVENKK--VIIEFSSPNIAKPFH 159

Query: 621  VGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIAD 680
             GHLRSTIIG  ++ L E LG +V+R+N++GDWG QFG+L    +    +      PI  
Sbjct: 160  AGHLRSTIIGGFLANLYEKLGWEVIRMNYLGDWGKQFGLLAVGFERYGNEEALVKDPIHH 219

Query: 681  LQAFYKESKKRFDE-------DEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQK 733
            L   Y    K  +E       ++    +A +    ++  D +  K W+   + S   +  
Sbjct: 220  LFDVYVRINKDIEEEGDSIPLEQSTNGKAREYFKRMEDGDEEALKIWKRFREFSIEKYID 279

Query: 734  IYDRLNVTLTE-RGES-FYQKHMEQLVPYLEKKGLLELDDGRKIMW--GEDRGSIPMTIV 789
             Y RLN+      GES   ++ M + +   ++KGL   D G  ++     ++      + 
Sbjct: 280  TYARLNIKYDVYSGESQVSKESMLKAIDLFKEKGLTHEDKGAVLIDLTKFNKKLGKAIVQ 339

Query: 790  KSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRM 849
            KSDG   Y T D+ A   R E+   D ++YV    Q +H     E  K+ G        +
Sbjct: 340  KSDGTTLYLTRDVGAAMDRYEKYHFDKMIYVIASQQDLHAAQFFEILKQMGF--EWAKDL 397

Query: 850  DFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQ 909
              V FG+V G       TR G  V L  +L+E   +  + +K KN +         E   
Sbjct: 398  QHVNFGMVQG-----MSTRKGTVVFLDNILEETKEKMHEVMK-KNENKYAQIEHPEEVAD 451

Query: 910  AVAYGCIKYADLSHNRNLDYVFSFDKMLDDRGNTAVYLLYAYTRIASIARTAGINSEDLR 969
             V    +   D+   R  +Y F +++ML   G+T  YL YA++R+ S+ R A   +++  
Sbjct: 452  LVGISAVMIQDMQGKRINNYEFKWERMLSFEGDTGPYLQYAHSRLRSVERNASGITQEKW 511

Query: 970  VAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDISTAFSEFYDNCY 1029
            + A      L+      L + L +  DVL    +      +  YL+ ++   S  YD  +
Sbjct: 512  INAD--FSLLKEPAAKLLIRLLGQYPDVLRNAIKTHEPTTVVTYLFKLTHQVSSCYDVLW 569

Query: 1030 CIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNIRT 1068
               +  E     + T RL L  A  +V+     +L +  
Sbjct: 570  VAGQTEE-----LATARLALYGAARQVLYNGMRLLGLTP 603
>1f7u_A Arginyl-tRNA synthetase; RNA-protein complex, aminoacylation; HET: PSU 1MG 2MG H2U M2G 5MC 5MU 1MA ARG; 2.20A {Saccharomyces cerevisiae} SCOP: a.27.1.1 c.26.1.1 d.67.2.1 PDB: 1bs2_A* 1f7v_A* Length = 607 Back     alignment and structure
>1f7u_A Arginyl-tRNA synthetase; RNA-protein complex, aminoacylation; HET: PSU 1MG 2MG H2U M2G 5MC 5MU 1MA ARG; 2.20A {Saccharomyces cerevisiae} SCOP: a.27.1.1 c.26.1.1 d.67.2.1 PDB: 1bs2_A* 1f7v_A* Length = 607 Back     alignment and structure
>2zue_A Arginyl-tRNA synthetase; aminoacyl-tRNA synthetase, ATP-binding, cytoplasm, ligase, nucleotide-binding, protein biosynthesis, ligase/RNA complex; HET: ANP; 2.00A {Pyrococcus horikoshii} PDB: 2zuf_A Length = 629 Back     alignment and structure
>2zue_A Arginyl-tRNA synthetase; aminoacyl-tRNA synthetase, ATP-binding, cytoplasm, ligase, nucleotide-binding, protein biosynthesis, ligase/RNA complex; HET: ANP; 2.00A {Pyrococcus horikoshii} PDB: 2zuf_A Length = 629 Back     alignment and structure
>2zue_A Arginyl-tRNA synthetase; aminoacyl-tRNA synthetase, ATP-binding, cytoplasm, ligase, nucleotide-binding, protein biosynthesis, ligase/RNA complex; HET: ANP; 2.00A {Pyrococcus horikoshii} PDB: 2zuf_A Length = 629 Back     alignment and structure
>1iq0_A Arginyl-tRNA synthetase; riken structural genomics/proteomics initiative, RSGI, structural genomics, ligase; 2.30A {Thermus thermophilus} SCOP: a.27.1.1 c.26.1.1 d.67.2.1 Length = 592 Back     alignment and structure
>1iq0_A Arginyl-tRNA synthetase; riken structural genomics/proteomics initiative, RSGI, structural genomics, ligase; 2.30A {Thermus thermophilus} SCOP: a.27.1.1 c.26.1.1 d.67.2.1 Length = 592 Back     alignment and structure
>1iq0_A Arginyl-tRNA synthetase; riken structural genomics/proteomics initiative, RSGI, structural genomics, ligase; 2.30A {Thermus thermophilus} SCOP: a.27.1.1 c.26.1.1 d.67.2.1 Length = 592 Back     alignment and structure
>3fnr_A Arginyl-tRNA synthetase; transferase, PSI-2, NYSGXRC, struc genomics, protein structure initiative; 2.20A {Campylobacter jejuni} Length = 464 Back     alignment and structure
>3fnr_A Arginyl-tRNA synthetase; transferase, PSI-2, NYSGXRC, struc genomics, protein structure initiative; 2.20A {Campylobacter jejuni} Length = 464 Back     alignment and structure
>3fnr_A Arginyl-tRNA synthetase; transferase, PSI-2, NYSGXRC, struc genomics, protein structure initiative; 2.20A {Campylobacter jejuni} Length = 464 Back     alignment and structure
>3gdz_A Arginyl-tRNA synthetase; klebsiella pneumoniae subsp. pneumo 78578, structural genomics, PSI-2; HET: MSE; 2.20A {Klebsiella pneumoniae subsp} Length = 109 Back     alignment and structure
>3gdz_A Arginyl-tRNA synthetase; klebsiella pneumoniae subsp. pneumo 78578, structural genomics, PSI-2; HET: MSE; 2.20A {Klebsiella pneumoniae subsp} Length = 109 Back     alignment and structure
>3gdz_A Arginyl-tRNA synthetase; klebsiella pneumoniae subsp. pneumo 78578, structural genomics, PSI-2; HET: MSE; 2.20A {Klebsiella pneumoniae subsp} Length = 109 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query1458
1f7u_A607 Arginyl-tRNA synthetase; RNA-protein complex, amin 100.0
2zue_A629 Arginyl-tRNA synthetase; aminoacyl-tRNA synthetase 100.0
1iq0_A592 Arginyl-tRNA synthetase; riken structural genomics 100.0
3fnr_A464 Arginyl-tRNA synthetase; transferase, PSI-2, NYSGX 100.0
1f7u_A607 Arginyl-tRNA synthetase; RNA-protein complex, amin 100.0
2zue_A629 Arginyl-tRNA synthetase; aminoacyl-tRNA synthetase 100.0
1iq0_A592 Arginyl-tRNA synthetase; riken structural genomics 100.0
3fnr_A464 Arginyl-tRNA synthetase; transferase, PSI-2, NYSGX 100.0
4dlp_A536 Aminoacyl-tRNA synthetase, class I:aminoacyl-tRNA 100.0
1li5_A461 Cysrs, cysteinyl-tRNA synthetase, transfer RNA-Cys 100.0
3kfl_A564 Methionyl-tRNA synthetase; parasite, aminoacyl-tRN 100.0
3h99_A560 Methionyl-tRNA synthetase; rossmann fold, aminoacy 100.0
2csx_A497 Methionyl-tRNA synthetase; ligase, riken structura 100.0
3tqo_A462 Cysteinyl-tRNA synthetase; protein synthesis, liga 100.0
2x1l_A524 Methionyl-tRNA synthetase; nucleotide-binding, pro 100.0
2d5b_A500 Methionyl-tRNA synthetase; rossmann fold, class 1A 100.0
3sp1_A501 Cysteinyl-tRNA synthetase; structural genomics, se 99.97
1rqg_A722 Methionyl-tRNA synthetase; translation, dimerizati 99.96
3c8z_A414 Cysteinyl-tRNA synthetase; cysteine ligase, rossma 99.96
3u1f_A542 Methionyl-tRNA synthetase; aminoacyl-tRNA syntheta 99.95
1wkb_A810 Leucyl-tRNA synthetase; leucine, aminoacyl-tRNA, e 99.89
1ile_A821 Ilers, isoleucyl-tRNA synthetase; aminoacyl-tRNA s 99.84
2o5r_A481 Glutamyl-tRNA synthetase 1; TM1351, EC 6.1.1.17, g 99.84
1ffy_A917 Isoleucyl-tRNA synthetase; protein-RNA complex, me 99.84
3gdz_A109 Arginyl-tRNA synthetase; klebsiella pneumoniae sub 99.83
1irx_A523 Lysyl-tRNA synthetase; beta sandwitch, zinc-bindin 99.82
1gax_A862 Valrs, valyl-tRNA synthetase; protein-RNA complex, 99.81
2v0c_A878 Aminoacyl-tRNA synthetase; ligase, nucleotide-bind 99.8
4arc_A880 Leucine--tRNA ligase; ligase-RNA complex, nucleoti 99.8
3al0_C592 Glutamyl-tRNA(Gln) amidotransferase subunit C, GL 99.78
3al0_C 592 Glutamyl-tRNA(Gln) amidotransferase subunit C, GL 99.77
1li5_A461 Cysrs, cysteinyl-tRNA synthetase, transfer RNA-Cys 99.73
4dlp_A536 Aminoacyl-tRNA synthetase, class I:aminoacyl-tRNA 99.7
3gdz_A109 Arginyl-tRNA synthetase; klebsiella pneumoniae sub 99.7
1wz2_A967 Leucyl-tRNA synthetase; ligase, riken structural g 99.7
3kfl_A564 Methionyl-tRNA synthetase; parasite, aminoacyl-tRN 99.68
3afh_A488 Glutamyl-tRNA synthetase 2; protein-substrate comp 99.65
2o5r_A 481 Glutamyl-tRNA synthetase 1; TM1351, EC 6.1.1.17, g 99.65
1nzj_A298 Hypothetical protein YADB; Zn cluster, glutamyl T- 99.63
1nzj_A298 Hypothetical protein YADB; Zn cluster, glutamyl T- 99.57
3c8z_A414 Cysteinyl-tRNA synthetase; cysteine ligase, rossma 99.56
2cfo_A492 Glutamyl-tRNA synthetase; ligase, aminoacyl-tRNA s 99.53
4g6z_A490 Glutamate-tRNA ligase; aminoacyl-tRNA synthetase, 99.53
2d5b_A500 Methionyl-tRNA synthetase; rossmann fold, class 1A 99.51
3h99_A560 Methionyl-tRNA synthetase; rossmann fold, aminoacy 99.5
1j09_A468 Glutamyl-tRNA synthetase; glurs-ATP-Glu complex, r 99.5
3tqo_A462 Cysteinyl-tRNA synthetase; protein synthesis, liga 99.49
2csx_A497 Methionyl-tRNA synthetase; ligase, riken structura 99.46
2x1l_A524 Methionyl-tRNA synthetase; nucleotide-binding, pro 99.43
2ja2_A498 Glutamyl-tRNA synthetase; non-discriminating gluta 99.41
4gri_A512 Glutamate--tRNA ligase; structural genomics, seatt 99.4
3afh_A 488 Glutamyl-tRNA synthetase 2; protein-substrate comp 99.39
3aii_A553 Glutamyl-tRNA synthetase; amino-acyl tRNA syntheta 99.27
1irx_A 523 Lysyl-tRNA synthetase; beta sandwitch, zinc-bindin 99.22
1qtq_A553 GLNRS, protein (glutaminyl-tRNA synthetase); gluta 99.18
3sp1_A501 Cysteinyl-tRNA synthetase; structural genomics, se 99.17
2ja2_A 498 Glutamyl-tRNA synthetase; non-discriminating gluta 99.11
4g6z_A 490 Glutamate-tRNA ligase; aminoacyl-tRNA synthetase, 99.1
2hz7_A851 Glutaminyl-tRNA synthetase; rossmann fold, GLNRS c 99.09
1wkb_A810 Leucyl-tRNA synthetase; leucine, aminoacyl-tRNA, e 99.08
1j09_A 468 Glutamyl-tRNA synthetase; glurs-ATP-Glu complex, r 99.06
4arc_A 880 Leucine--tRNA ligase; ligase-RNA complex, nucleoti 98.94
4gri_A 512 Glutamate--tRNA ligase; structural genomics, seatt 98.9
1rqg_A722 Methionyl-tRNA synthetase; translation, dimerizati 98.88
2cfo_A 492 Glutamyl-tRNA synthetase; ligase, aminoacyl-tRNA s 98.87
2v0c_A 878 Aminoacyl-tRNA synthetase; ligase, nucleotide-bind 98.6
1ile_A 821 Ilers, isoleucyl-tRNA synthetase; aminoacyl-tRNA s 98.55
3aii_A 553 Glutamyl-tRNA synthetase; amino-acyl tRNA syntheta 98.51
2hz7_A 851 Glutaminyl-tRNA synthetase; rossmann fold, GLNRS c 98.48
1qtq_A 553 GLNRS, protein (glutaminyl-tRNA synthetase); gluta 98.45
3u1f_A 542 Methionyl-tRNA synthetase; aminoacyl-tRNA syntheta 98.39
1ffy_A 917 Isoleucyl-tRNA synthetase; protein-RNA complex, me 98.28
1gax_A 862 Valrs, valyl-tRNA synthetase; protein-RNA complex, 98.22
1wz2_A 967 Leucyl-tRNA synthetase; ligase, riken structural g 97.88
2cyb_A323 Tyrosyl-tRNA synthetase; rossmann-fold, structural 94.5
1n3l_A372 Tyrosyl-tRNA synthetase; rossmann fold AS catalyti 93.29
2dlc_X394 Tyrosyl-tRNA synthetase, cytoplasmic; tyrrs, ligas 92.68
2pid_A356 Tyrosyl-tRNA synthetase; aminoacyl-tRNA synthetase 92.46
2yxn_A322 Tyrosyl-tRNA synthetase; tRNA synthetases class I, 92.01
2jan_A432 Tyrosyl-tRNA synthetase; protein biosynthesis, ami 91.0
2ts1_A419 Tyrosyl-tRNA synthetase; ligase (synthetase); 2.30 90.79
1jil_A420 Tyrrs, tyrosyl-tRNA synthetase; truncation, based 90.79
1h3f_A432 Tyrosyl-tRNA synthetase; ligase, aminoacyl-tRNA sy 89.42
2g36_A340 Tryptophanyl-tRNA synthetase; TM0492, structural g 89.15
3tzl_A322 Tryptophanyl-tRNA synthetase; structural genomics, 88.49
2el7_A337 Tryptophanyl-tRNA synthetase; aminoacyl-tRNA synth 88.0
2ip1_A432 Tryptophanyl-tRNA synthetase; rossmann fold, struc 87.66
3i05_A395 Tryptophanyl-tRNA synthetase; APO tRNA-ligase, ATP 87.21
2cya_A364 Tyrosyl-tRNA synthetase; tyrrs, aminoacylation, st 87.06
1r6u_A437 Tryptophanyl-tRNA synthetase; class IC tRNA synthe 86.97
1r6t_A477 Tryptophanyl-tRNA synthetase; class IC tRNA synthe 86.27
3hzr_A386 Tryptophanyl-tRNA synthetase; APO tRNA-ligase, str 86.26
3hv0_A393 Tryptophanyl-tRNA synthetase; tRNA-ligase, ATP-bin 86.04
1yi8_B351 Tryptophanyl-tRNA synthetase; ligase; HET: TRP; 2. 85.22
1y42_X392 Tyrosyl-tRNA synthetase, mitochondrial; CYT-18, tR 84.97
3tze_A406 Tryptophanyl-tRNA synthetase; structural genomics, 84.78
3jxe_A392 Tryptophanyl-tRNA synthetase; adenosine triphospha 84.27
1i6k_A328 TRPRS, tryptophanyl-tRNA synthetase; class I tRNA 82.39
2zp1_A314 Tyrosyl-tRNA synthetase; tRNA synthetases class I, 81.79
3vgj_A373 Tyrosyl-tRNA synthetase, putative; tyrrs, ligase; 81.58
2j5b_A348 Tyrosyl-tRNA synthetase; ligase, protein biosynthe 81.45
>1f7u_A Arginyl-tRNA synthetase; RNA-protein complex, aminoacylation; HET: PSU 1MG 2MG H2U M2G 5MC 5MU 1MA ARG; 2.20A {Saccharomyces cerevisiae} SCOP: a.27.1.1 c.26.1.1 d.67.2.1 PDB: 1bs2_A* 1f7v_A* Back     alignment and structure
Probab=100.00  E-value=4.4e-101  Score=962.74  Aligned_cols=562  Identities=26%  Similarity=0.388  Sum_probs=482.1

Q ss_pred             cCHHHHHHHHHhhhhhhccccc-CCcceeEeecCcccccccccchhchHHHHHHHHhhcCCCCChhhHHHHHHHhhcccc
Q psy15414        475 MSVRDYLSDVFTHAVQVAFPEL-GDKTASVASTNEKYVHKFGDFQCNDAMALCKIFKDKGEKKNPFDIAQSIASVVTSEL  553 (1458)
Q Consensus       475 ~~l~~~L~ell~dAi~~a~~~~-~~~~v~v~~~~np~~~~~gDys~n~A~~Lak~l~~~g~~~~P~~IA~~i~~~i~~~l  553 (1458)
                      +++.+.+++.+.+++..++... ......++.|+++   +||||++|.++  +|.++     +||++||++|++.    |
T Consensus        29 ~~~~~~~~~~i~~~l~~~~~~~~~~~~~~v~~~~~~---~~GD~a~~~~~--~k~~~-----~~P~~iA~~i~~~----l   94 (607)
T 1f7u_A           29 VNIVDLMRNYISQELSKISGVDSSLIFPALEWTNTM---ERGDLLIPIPR--LRIKG-----ANPKDLAVQWAEK----F   94 (607)
T ss_dssp             TCHHHHHHHHHHHHHHHHHCCCHHHHGGGCEECSSG---GGCSEEEEGGG--GCCTT-----CCHHHHHHHHHHT----C
T ss_pred             ccHHHHHHHHHHHHHHHHhCCCccccccceeCCCCC---CCCchhhHHHH--HHhcC-----CCHHHHHHHHHHh----c
Confidence            3567788888888888764311 1122347788888   99999998765  25443     7999999999999    7


Q ss_pred             cCCcccccceeEEEEeCCceEEEEeCHHHHHH-HHHHHHHcCCCCCC--CCCCceEEEEeeCCccCCccccchhhHHHHH
Q psy15414        554 ATNPSLAKVIDKIEVAKPGFVNVFLSRVYAGE-QIKDIIVNGVQPPT--LNKKLRVLVDFSSPNIAKEMHVGHLRSTIIG  630 (1458)
Q Consensus       554 ~~~~~~~~~i~~vevagpGfiN~~l~~~~~~~-~l~~i~~~g~~~~~--~~~~~kV~VE~~SpNp~kplHIGHlRsaiIG  630 (1458)
                      +.+    +.|++++++|| ||||+|+++++.+ ++..++..+..|+.  .+.+++|+||||||||||||||||+||+|||
T Consensus        95 ~~~----~~i~~ve~ag~-fiN~~l~~~~~~~~~~~~i~~~~~~~G~~~~~~~~~V~ve~~spN~~~plHvGHlRs~iiG  169 (607)
T 1f7u_A           95 PCG----DFLEKVEANGP-FIQFFFNPQFLAKLVIPDILTRKEDYGSCKLVENKKVIIEFSSPNIAKPFHAGHLRSTIIG  169 (607)
T ss_dssp             CCT----TTEEEEEEETT-EEEEEECHHHHHHHHHHHHHHHGGGTTCCCCSSCCEEEEECCCCBTTSCCBGGGHHHHHHH
T ss_pred             ccc----CceeEEEEcCC-EEEEEECHHHHHHHHHHHHHhhhhhcCCCcccCCCeEEEEecCCCCCCCCccchHHHHHHH
Confidence            654    68999999996 9999999999996 56667777767753  4578899999999999999999999999999


Q ss_pred             HHHHHHHHHcCCcEEEEeecCCchhHHHHHHHHHHhhcCCCC-CCCCChhHHHHHHHHhhhccCCc-------HHHHHHH
Q psy15414        631 DTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYL-TKSPPIADLQAFYKESKKRFDED-------EIFKKRA  702 (1458)
Q Consensus       631 D~LaRil~~~Gy~V~r~~yInD~G~Qi~~l~~~~~~~~~~~~-~~~~~i~~l~~iy~~~~~~~~~~-------~~~~~~a  702 (1458)
                      |+|+|+|+++||+|+++|||||||+||++++.++. ++++.. ....|+.++.++|+++++.++++       +.+.++|
T Consensus       170 D~laRil~~~G~~V~~~~~i~D~G~Q~~~l~~~~~-~~g~~~~~~~~~i~~l~~~Y~~~~~~~~~~~e~g~~~~~i~~~A  248 (607)
T 1f7u_A          170 GFLANLYEKLGWEVIRMNYLGDWGKQFGLLAVGFE-RYGNEEALVKDPIHHLFDVYVRINKDIEEEGDSIPLEQSTNGKA  248 (607)
T ss_dssp             HHHHHHHHHTTCEEEEEEEEBCCSHHHHHHHHHHH-HHCCHHHHHHCHHHHHHHHHHHHHHHHHHSTTSSCHHHHSSHHH
T ss_pred             HHHHHHHHHcCCCeeEEEeecCcchHHHHHHHHHH-HhCchhhccCCChHHHHHHHHHHHHHhhhccccccccHHHHHHH
Confidence            99999999999999999999999999999998854 454321 11246888999999999999888       8999999


Q ss_pred             HHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhCCEEec-ccccccc-hhHHHHHHHHHHcCCeEeeCCcEEEEcCC
Q psy15414        703 YQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE-RGESFYQ-KHMEQLVPYLEKKGLLELDDGRKIMWGED  780 (1458)
Q Consensus       703 ~~~~~~le~gd~e~~~lw~~~~~~s~~~f~~~y~~L~i~f~~-~geS~~~-~~v~~vi~~L~~kG~~ye~dGa~~~~~d~  780 (1458)
                      ++.+.+||.||++++++|+.|+++++++|+++|++|||.|+. .+||+|. +.++++++.|+++|++|+++|++|+++++
T Consensus       249 ~~~~~~le~gd~e~~~~w~~~~~~~~~~~~~~~~~L~V~fD~~~~ES~~~~~~~~~vi~~L~~kG~~ye~dGa~~~~~~~  328 (607)
T 1f7u_A          249 REYFKRMEDGDEEALKIWKRFREFSIEKYIDTYARLNIKYDVYSGESQVSKESMLKAIDLFKEKGLTHEDKGAVLIDLTK  328 (607)
T ss_dssp             HHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHTTCCCSEEEEGGGCCHHHHHHHHHHHHHTTCEEEETTEEEEEGGG
T ss_pred             HHHHHHhhCCCHHHHHHHHHHHHHHHHHHHHHHHHcCCcceeecCcchhhhhHHHHHHHHHHhCCCEEEECCcEEEEecc
Confidence            999999999999999999999999999999999999998853 5789887 78999999999999999999999998865


Q ss_pred             C--CCCCcEEEcCCCCccCCCcchHHHHHHhhhcCCCeEEEEeeCCccccHHHHHHHHHHcCCCCCCcceEEEEEeEEEe
Q psy15414        781 R--GSIPMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVHFRLLEECAKKAGILNPNKTRMDFVGFGVVL  858 (1458)
Q Consensus       781 ~--d~~~~vL~ksDGt~tY~trDiA~~~~k~~~~~~d~iIyVvg~dq~~hf~~l~~il~alG~~~~~~~~~~H~~fg~V~  858 (1458)
                      .  +..|+|++||||++||+|+|||||+||+..+++|++|||||++|++||+|++++++++|+  +++..|+|++||+|.
T Consensus       329 ~g~~~d~~v~~KsDG~~~Y~t~Dia~~~~k~~~~~~d~~IyV~g~~q~~~f~q~~~~~~~lG~--~~~~~~~Hv~fg~v~  406 (607)
T 1f7u_A          329 FNKKLGKAIVQKSDGTTLYLTRDVGAAMDRYEKYHFDKMIYVIASQQDLHAAQFFEILKQMGF--EWAKDLQHVNFGMVQ  406 (607)
T ss_dssp             TCTTTCEEEEECTTSCCCHHHHHHHHHHHHHHHHCCSEEEEECCGGGHHHHHHHHHHHHHTTC--GGGGGEEEECCCCEE
T ss_pred             cCCCCCceeEeccCCCcCCCCCcHHHHHHHHhhcCCCcEEEEEcChHhhHHHHHHHHHHHcCC--CcCcEEEEecccccc
Confidence            4  212489999999999999999999999987899999999999999999999999999998  356689999999984


Q ss_pred             cCCCcccccccCCccchHHHHHHHHHHHHHHHhhcCCCCCCChhhhHHHHHhhhhhheeeeeecCCCCCccccchhhHHh
Q psy15414        859 GEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLD  938 (1458)
Q Consensus       859 ~~~G~KMSKR~GnvI~l~DLLde~~~~a~~~~~~~~~~~~~~~ee~~~~ad~v~~~alRy~lLs~~~~~d~~Fd~d~~l~  938 (1458)
                           |||||+||+|+++||++++..+|.+.+.+ .++.....++.+++++.||+++|||++|+.+++++++|||+++++
T Consensus       407 -----kMSkR~G~~v~L~dLlde~~~~a~~~~~~-~~~~~~~~~e~~~~a~~vgi~avry~~Ls~~~~s~~~Fd~d~~~~  480 (607)
T 1f7u_A          407 -----GMSTRKGTVVFLDNILEETKEKMHEVMKK-NENKYAQIEHPEEVADLVGISAVMIQDMQGKRINNYEFKWERMLS  480 (607)
T ss_dssp             -----SCCGGGTCCCBHHHHHHHHHHHHHHHHHT-CHHHHTTCSCHHHHHHHHHHHHHHHHHHSSCTTCCEECCHHHHHC
T ss_pred             -----cccCCCCCcccHHHHHHHHHHHHHHHHHh-CcccccchhhHHHHHHHHHHHHHHHHHhccCCCCCcccCHHHHHH
Confidence                 59999999999999999999888765542 211001135678899999999999999999999999999999999


Q ss_pred             hhcCcHHHHHHHHHHHHHHHHHh-CCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHH
Q psy15414        939 DRGNTAVYLLYAYTRIASIARTA-GINSEDLRVAAQSTPVSLEHEKEFALAKTLLRMNDVLMLVTRDLCLHHLCEYLYDI 1017 (1458)
Q Consensus       939 ~n~n~g~ylqYa~aRi~SIlrK~-~~~~~~i~~~~~~~~~~l~~~~e~~Ll~~l~~f~~~v~~a~~~~~p~~l~~yL~~L 1017 (1458)
                      +++||||||||+|+|+|||+||+ +.....+   ...+...+.++.|++|+..|.+||+++.+++++++||.+|.||++|
T Consensus       481 ~~g~t~pylqYa~aRi~SIlrka~~~~~~~~---~~~~~~~l~~~~e~~L~~~l~~fp~vv~~a~~~~~P~~l~~Yl~~L  557 (607)
T 1f7u_A          481 FEGDTGPYLQYAHSRLRSVERNASGITQEKW---INADFSLLKEPAAKLLIRLLGQYPDVLRNAIKTHEPTTVVTYLFKL  557 (607)
T ss_dssp             CSSSSHHHHHHHHHHHHHHHHHTTTSCHHHH---TTSCGGGCCSHHHHHHHHHHTTHHHHHHHHHHHCCHHHHHHHHHHH
T ss_pred             HhccchHHHHHHHHHHHHHHHHhcCCCcccc---cccchhhcCCHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence            99999999999999999999998 3221111   0111223568999999999999999999999999999999999999


Q ss_pred             HHHHHhhhhhccccccccccccccchhHHHHHHHHHHHHHHHHhhhcccccchhh
Q psy15414       1018 STAFSEFYDNCYCIEKDAEGKIKTVHTGRLLLAEATAKVMKKCFDILNIRTAIAE 1072 (1458)
Q Consensus      1018 A~~fN~fy~~~~vL~k~~~~~~~~~~~aRL~L~~av~~VL~~gL~LLGI~~~e~m 1072 (1458)
                      |+.||+||+.||||..+     ++++.+||+||.+|++||++||+||||++|++|
T Consensus       558 a~~fn~fY~~~~Vl~~~-----~~~~~aRL~L~~a~~~vL~~gL~LLGI~~perM  607 (607)
T 1f7u_A          558 THQVSSCYDVLWVAGQT-----EELATARLALYGAARQVLYNGMRLLGLTPVERM  607 (607)
T ss_dssp             HHHHHHHHHHCCSTTSC-----HHHHHHHHHHHHHHHHHHHHHHHHHTCCCCSCC
T ss_pred             HHHHHHHHHhCCCCCCC-----HHHHHHHHHHHHHHHHHHHHHHHhcCCCccccC
Confidence            99999999999998543     245789999999999999999999999999998
>2zue_A Arginyl-tRNA synthetase; aminoacyl-tRNA synthetase, ATP-binding, cytoplasm, ligase, nucleotide-binding, protein biosynthesis, ligase/RNA complex; HET: ANP; 2.00A {Pyrococcus horikoshii} PDB: 2zuf_A Back     alignment and structure
>1iq0_A Arginyl-tRNA synthetase; riken structural genomics/proteomics initiative, RSGI, structural genomics, ligase; 2.30A {Thermus thermophilus} SCOP: a.27.1.1 c.26.1.1 d.67.2.1 Back     alignment and structure
>3fnr_A Arginyl-tRNA synthetase; transferase, PSI-2, NYSGXRC, struc genomics, protein structure initiative; 2.20A {Campylobacter jejuni} Back     alignment and structure
>1f7u_A Arginyl-tRNA synthetase; RNA-protein complex, aminoacylation; HET: PSU 1MG 2MG H2U M2G 5MC 5MU 1MA ARG; 2.20A {Saccharomyces cerevisiae} SCOP: a.27.1.1 c.26.1.1 d.67.2.1 PDB: 1bs2_A* 1f7v_A* Back     alignment and structure
>2zue_A Arginyl-tRNA synthetase; aminoacyl-tRNA synthetase, ATP-binding, cytoplasm, ligase, nucleotide-binding, protein biosynthesis, ligase/RNA complex; HET: ANP; 2.00A {Pyrococcus horikoshii} PDB: 2zuf_A Back     alignment and structure
>1iq0_A Arginyl-tRNA synthetase; riken structural genomics/proteomics initiative, RSGI, structural genomics, ligase; 2.30A {Thermus thermophilus} SCOP: a.27.1.1 c.26.1.1 d.67.2.1 Back     alignment and structure
>3fnr_A Arginyl-tRNA synthetase; transferase, PSI-2, NYSGXRC, struc genomics, protein structure initiative; 2.20A {Campylobacter jejuni} Back     alignment and structure
>4dlp_A Aminoacyl-tRNA synthetase, class I:aminoacyl-tRNA synthetase, class IA:methionyl-tRNA...; structural genomics; 2.65A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} Back     alignment and structure
>1li5_A Cysrs, cysteinyl-tRNA synthetase, transfer RNA-Cys; cysteine, E.coli, ligase; 2.30A {Escherichia coli} SCOP: a.27.1.1 c.26.1.1 PDB: 1li7_A 1u0b_B Back     alignment and structure
>3kfl_A Methionyl-tRNA synthetase; parasite, aminoacyl-tRNA synthetase, tRNA ligase metrs, methionine, translation, ATP-binding; HET: ME8; 2.00A {Leishmania major} Back     alignment and structure
>3h99_A Methionyl-tRNA synthetase; rossmann fold, aminoacyl-tRNA synthetase, ATP-binding, ligas binding, nucleotide-binding, protein biosynthesis; HET: CIT; 1.40A {Escherichia coli} PDB: 3h97_A* 3h9b_A* 1f4l_A 3h9c_A* 1pfv_A* 1pfu_A 1p7p_A* 1pfw_A* 1pfy_A* 1pg0_A* 1pg2_A* 1qqt_A 1mea_A 1med_A Back     alignment and structure
>2csx_A Methionyl-tRNA synthetase; ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics, ligase/RNA complex; 2.70A {Aquifex aeolicus} PDB: 2ct8_A* Back     alignment and structure
>3tqo_A Cysteinyl-tRNA synthetase; protein synthesis, ligase; 2.30A {Coxiella burnetii} Back     alignment and structure
>2x1l_A Methionyl-tRNA synthetase; nucleotide-binding, protein biosynthesis, ligase, aminoacyl- synthetase; HET: ADN CXS; 2.30A {Mycobacterium smegmatis} PDB: 2x1m_A* Back     alignment and structure
>2d5b_A Methionyl-tRNA synthetase; rossmann fold, class 1A AARS, isomerase, structural genomics, NPPSFA; 1.80A {Thermus thermophilus} SCOP: a.27.1.1 c.26.1.1 PDB: 1woy_A 1a8h_A 2d54_A Back     alignment and structure
>3sp1_A Cysteinyl-tRNA synthetase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, LYME disease; HET: AMP; 2.55A {Borrelia burgdorferi} Back     alignment and structure
>1rqg_A Methionyl-tRNA synthetase; translation, dimerization, ligase; 2.90A {Pyrococcus abyssi} SCOP: a.27.1.1 c.26.1.1 g.41.1.1 Back     alignment and structure
>3c8z_A Cysteinyl-tRNA synthetase; cysteine ligase, rossmann fold, Cys-SA inhibitor, zinc binding, ATP-binding, aminoacyl-tRNA synthetase; HET: 5CA 1PE EPE; 1.60A {Mycobacterium smegmatis} Back     alignment and structure
>3u1f_A Methionyl-tRNA synthetase; aminoacyl-tRNA synthetase, AARS, metrs, parasite, protein-IN complex, rossmann-fold, translation; HET: 392; 2.20A {Trypanosoma brucei} PDB: 3u1e_A* 3u1g_A* 3u20_A* 4eg1_A 4eg3_A* 4eg6_A* 4eg8_A* 4eg5_A* 3tun_A* 3u1z_A* 4eg4_A* 4eg7_A* 4ega_A* Back     alignment and structure
>1wkb_A Leucyl-tRNA synthetase; leucine, aminoacyl-tRNA, editing, amino acid, aminoacylation, trnaLeu, structural genomics; 2.05A {Pyrococcus horikoshii} Back     alignment and structure
>1ile_A Ilers, isoleucyl-tRNA synthetase; aminoacyl-tRNA synthetase, riken structural genomics/proteom initiative, RSGI, structural genomics; 2.50A {Thermus thermophilus} SCOP: a.27.1.1 b.51.1.1 c.26.1.1 PDB: 1jzq_A* 1jzs_A* Back     alignment and structure
>2o5r_A Glutamyl-tRNA synthetase 1; TM1351, EC 6.1.1.17, glutamate-T ligase 1, glurs 1, structural genomics, joint center for ST genomics, JCSG; 2.34A {Thermotoga maritima} Back     alignment and structure
>1ffy_A Isoleucyl-tRNA synthetase; protein-RNA complex, metal IONS, editing tRNA synthetase, double-sieve, ligase/RNA, mupiroci; HET: MRC; 2.20A {Staphylococcus aureus} SCOP: a.27.1.1 b.51.1.1 c.26.1.1 PDB: 1qu2_A* 1qu3_A* Back     alignment and structure
>3gdz_A Arginyl-tRNA synthetase; klebsiella pneumoniae subsp. pneumo 78578, structural genomics, PSI-2; HET: MSE; 2.20A {Klebsiella pneumoniae subsp} Back     alignment and structure
>1irx_A Lysyl-tRNA synthetase; beta sandwitch, zinc-binding structure, rossmann fold, alpha-helix CAGE; 2.60A {Pyrococcus horikoshii} SCOP: a.97.1.2 c.26.1.1 Back     alignment and structure
>1gax_A Valrs, valyl-tRNA synthetase; protein-RNA complex, rossmann fold, coiled coil, riken structural genomics/proteomics initiative, RSGI; HET: VAA; 2.90A {Thermus thermophilus} SCOP: a.2.7.3 a.27.1.1 b.51.1.1 c.26.1.1 PDB: 1ivs_A* 1iyw_A Back     alignment and structure
>2v0c_A Aminoacyl-tRNA synthetase; ligase, nucleotide-binding, protein biosynthesis; HET: LMS ANZ; 1.85A {Thermus thermophilus} PDB: 1h3n_A* 1obc_A* 1obh_A* 2bte_A* 2byt_A 2v0g_A* Back     alignment and structure
>4arc_A Leucine--tRNA ligase; ligase-RNA complex, nucleotide-binding, protein biosynthesis I aminoacyl-tRNA synthetase, ATP-binding; 2.00A {Escherichia coli} PDB: 4aq7_A 4ari_A* 4as1_A* Back     alignment and structure
>3al0_C Glutamyl-tRNA(Gln) amidotransferase subunit C, GL tRNA synthetase 2; protein-RNA complex, ligase-RNA complex; HET: GSU; 3.37A {Thermotoga maritima} Back     alignment and structure
>3al0_C Glutamyl-tRNA(Gln) amidotransferase subunit C, GL tRNA synthetase 2; protein-RNA complex, ligase-RNA complex; HET: GSU; 3.37A {Thermotoga maritima} Back     alignment and structure
>1li5_A Cysrs, cysteinyl-tRNA synthetase, transfer RNA-Cys; cysteine, E.coli, ligase; 2.30A {Escherichia coli} SCOP: a.27.1.1 c.26.1.1 PDB: 1li7_A 1u0b_B Back     alignment and structure
>4dlp_A Aminoacyl-tRNA synthetase, class I:aminoacyl-tRNA synthetase, class IA:methionyl-tRNA...; structural genomics; 2.65A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} Back     alignment and structure
>3gdz_A Arginyl-tRNA synthetase; klebsiella pneumoniae subsp. pneumo 78578, structural genomics, PSI-2; HET: MSE; 2.20A {Klebsiella pneumoniae subsp} Back     alignment and structure
>1wz2_A Leucyl-tRNA synthetase; ligase, riken structural genomics/proteomics initiativ structural genomics, ligase-RNA complex; 3.21A {Pyrococcus horikoshii} Back     alignment and structure
>3kfl_A Methionyl-tRNA synthetase; parasite, aminoacyl-tRNA synthetase, tRNA ligase metrs, methionine, translation, ATP-binding; HET: ME8; 2.00A {Leishmania major} Back     alignment and structure
>3afh_A Glutamyl-tRNA synthetase 2; protein-substrate complex, aminoacyl-tRNA synthetase, ATP-binding, ligase, nucleotide-binding; HET: GSU; 2.00A {Thermotoga maritima} PDB: 3akz_B* Back     alignment and structure
>2o5r_A Glutamyl-tRNA synthetase 1; TM1351, EC 6.1.1.17, glutamate-T ligase 1, glurs 1, structural genomics, joint center for ST genomics, JCSG; 2.34A {Thermotoga maritima} Back     alignment and structure
>1nzj_A Hypothetical protein YADB; Zn cluster, glutamyl T-RNA synthetase, structural genomics, unknown function; 1.50A {Escherichia coli} SCOP: c.26.1.1 PDB: 2zlz_A* 4a91_A* Back     alignment and structure
>1nzj_A Hypothetical protein YADB; Zn cluster, glutamyl T-RNA synthetase, structural genomics, unknown function; 1.50A {Escherichia coli} SCOP: c.26.1.1 PDB: 2zlz_A* 4a91_A* Back     alignment and structure
>3c8z_A Cysteinyl-tRNA synthetase; cysteine ligase, rossmann fold, Cys-SA inhibitor, zinc binding, ATP-binding, aminoacyl-tRNA synthetase; HET: 5CA 1PE EPE; 1.60A {Mycobacterium smegmatis} Back     alignment and structure
>2cfo_A Glutamyl-tRNA synthetase; ligase, aminoacyl-tRNA synthetase, ATP-binding, nucleotide-B; HET: GLU; 2.45A {Synechococcus elongatus} Back     alignment and structure
>4g6z_A Glutamate-tRNA ligase; aminoacyl-tRNA synthetase, AARS, class 1B AARS, ATP-dependen charging, protein synthesis, structural genomics; HET: GLU; 2.05A {Burkholderia thailandensis} Back     alignment and structure
>2d5b_A Methionyl-tRNA synthetase; rossmann fold, class 1A AARS, isomerase, structural genomics, NPPSFA; 1.80A {Thermus thermophilus} SCOP: a.27.1.1 c.26.1.1 PDB: 1woy_A 1a8h_A 2d54_A Back     alignment and structure
>3h99_A Methionyl-tRNA synthetase; rossmann fold, aminoacyl-tRNA synthetase, ATP-binding, ligas binding, nucleotide-binding, protein biosynthesis; HET: CIT; 1.40A {Escherichia coli} PDB: 3h97_A* 3h9b_A* 1f4l_A 3h9c_A* 1pfv_A* 1pfu_A 1p7p_A* 1pfw_A* 1pfy_A* 1pg0_A* 1pg2_A* 1qqt_A 1mea_A 1med_A Back     alignment and structure
>1j09_A Glutamyl-tRNA synthetase; glurs-ATP-Glu complex, riken structural genomics/proteomics initiative, RSGI, structural genomics, ligase; HET: GLU ATP; 1.80A {Thermus thermophilus} SCOP: a.97.1.1 c.26.1.1 PDB: 1n75_A* 1n77_A* 1n78_A* 2cuz_A* 2cv0_A* 2cv1_A* 2cv2_A* 2dxi_A* 1g59_A 1gln_A Back     alignment and structure
>3tqo_A Cysteinyl-tRNA synthetase; protein synthesis, ligase; 2.30A {Coxiella burnetii} Back     alignment and structure
>2csx_A Methionyl-tRNA synthetase; ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics, ligase/RNA complex; 2.70A {Aquifex aeolicus} PDB: 2ct8_A* Back     alignment and structure
>2x1l_A Methionyl-tRNA synthetase; nucleotide-binding, protein biosynthesis, ligase, aminoacyl- synthetase; HET: ADN CXS; 2.30A {Mycobacterium smegmatis} PDB: 2x1m_A* Back     alignment and structure
>2ja2_A Glutamyl-tRNA synthetase; non-discriminating glutamyl-tRNA aminoacylation, protein biosynthesis, aminoacyl-tRNA synthetase, ligase; 1.65A {Mycobacterium tuberculosis} PDB: 3pny_A 3pnv_A Back     alignment and structure
>4gri_A Glutamate--tRNA ligase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, aminoacyl-tRNA synthetase; HET: GLU; 2.60A {Borrelia burgdorferi} Back     alignment and structure
>3afh_A Glutamyl-tRNA synthetase 2; protein-substrate complex, aminoacyl-tRNA synthetase, ATP-binding, ligase, nucleotide-binding; HET: GSU; 2.00A {Thermotoga maritima} PDB: 3akz_B* Back     alignment and structure
>3aii_A Glutamyl-tRNA synthetase; amino-acyl tRNA synthetase, ligase; 1.65A {Methanothermobacter thermautotrophicusorganism_taxid} Back     alignment and structure
>1irx_A Lysyl-tRNA synthetase; beta sandwitch, zinc-binding structure, rossmann fold, alpha-helix CAGE; 2.60A {Pyrococcus horikoshii} SCOP: a.97.1.2 c.26.1.1 Back     alignment and structure
>1qtq_A GLNRS, protein (glutaminyl-tRNA synthetase); glutamine, trnaGln, E. coli, complex, ligase/RNA complex; HET: QSI; 2.25A {Escherichia coli} SCOP: b.53.1.2 c.26.1.1 PDB: 1gsg_P* 1gts_A* 1gtr_A* 1zjw_A* 1o0b_A* 1o0c_A* 1qru_A* 1qrs_A* 1qrt_A* 1euy_A* 1euq_A* 1exd_A* 2rd2_A* 2re8_A* 1nyl_A Back     alignment and structure
>3sp1_A Cysteinyl-tRNA synthetase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, LYME disease; HET: AMP; 2.55A {Borrelia burgdorferi} Back     alignment and structure
>2ja2_A Glutamyl-tRNA synthetase; non-discriminating glutamyl-tRNA aminoacylation, protein biosynthesis, aminoacyl-tRNA synthetase, ligase; 1.65A {Mycobacterium tuberculosis} PDB: 3pny_A 3pnv_A Back     alignment and structure
>4g6z_A Glutamate-tRNA ligase; aminoacyl-tRNA synthetase, AARS, class 1B AARS, ATP-dependen charging, protein synthesis, structural genomics; HET: GLU; 2.05A {Burkholderia thailandensis} Back     alignment and structure
>2hz7_A Glutaminyl-tRNA synthetase; rossmann fold, GLNRS core, class I aminoacyl-tRNA synthetase, ligase; 2.30A {Deinococcus radiodurans} Back     alignment and structure
>1wkb_A Leucyl-tRNA synthetase; leucine, aminoacyl-tRNA, editing, amino acid, aminoacylation, trnaLeu, structural genomics; 2.05A {Pyrococcus horikoshii} Back     alignment and structure
>1j09_A Glutamyl-tRNA synthetase; glurs-ATP-Glu complex, riken structural genomics/proteomics initiative, RSGI, structural genomics, ligase; HET: GLU ATP; 1.80A {Thermus thermophilus} SCOP: a.97.1.1 c.26.1.1 PDB: 1n75_A* 1n77_A* 1n78_A* 2cuz_A* 2cv0_A* 2cv1_A* 2cv2_A* 2dxi_A* 1g59_A 1gln_A Back     alignment and structure
>4arc_A Leucine--tRNA ligase; ligase-RNA complex, nucleotide-binding, protein biosynthesis I aminoacyl-tRNA synthetase, ATP-binding; 2.00A {Escherichia coli} PDB: 4aq7_A 4ari_A* 4as1_A* Back     alignment and structure
>4gri_A Glutamate--tRNA ligase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, aminoacyl-tRNA synthetase; HET: GLU; 2.60A {Borrelia burgdorferi} Back     alignment and structure
>1rqg_A Methionyl-tRNA synthetase; translation, dimerization, ligase; 2.90A {Pyrococcus abyssi} SCOP: a.27.1.1 c.26.1.1 g.41.1.1 Back     alignment and structure
>2cfo_A Glutamyl-tRNA synthetase; ligase, aminoacyl-tRNA synthetase, ATP-binding, nucleotide-B; HET: GLU; 2.45A {Synechococcus elongatus} Back     alignment and structure
>2v0c_A Aminoacyl-tRNA synthetase; ligase, nucleotide-binding, protein biosynthesis; HET: LMS ANZ; 1.85A {Thermus thermophilus} PDB: 1h3n_A* 1obc_A* 1obh_A* 2bte_A* 2byt_A 2v0g_A* Back     alignment and structure
>1ile_A Ilers, isoleucyl-tRNA synthetase; aminoacyl-tRNA synthetase, riken structural genomics/proteom initiative, RSGI, structural genomics; 2.50A {Thermus thermophilus} SCOP: a.27.1.1 b.51.1.1 c.26.1.1 PDB: 1jzq_A* 1jzs_A* Back     alignment and structure
>3aii_A Glutamyl-tRNA synthetase; amino-acyl tRNA synthetase, ligase; 1.65A {Methanothermobacter thermautotrophicusorganism_taxid} Back     alignment and structure
>2hz7_A Glutaminyl-tRNA synthetase; rossmann fold, GLNRS core, class I aminoacyl-tRNA synthetase, ligase; 2.30A {Deinococcus radiodurans} Back     alignment and structure
>1qtq_A GLNRS, protein (glutaminyl-tRNA synthetase); glutamine, trnaGln, E. coli, complex, ligase/RNA complex; HET: QSI; 2.25A {Escherichia coli} SCOP: b.53.1.2 c.26.1.1 PDB: 1gsg_P* 1gts_A* 1gtr_A* 1zjw_A* 1o0b_A* 1o0c_A* 1qru_A* 1qrs_A* 1qrt_A* 1euy_A* 1euq_A* 1exd_A* 2rd2_A* 2re8_A* 1nyl_A Back     alignment and structure
>3u1f_A Methionyl-tRNA synthetase; aminoacyl-tRNA synthetase, AARS, metrs, parasite, protein-IN complex, rossmann-fold, translation; HET: 392; 2.20A {Trypanosoma brucei} PDB: 3u1e_A* 3u1g_A* 3u20_A* 4eg1_A 4eg3_A* 4eg6_A* 4eg8_A* 4eg5_A* 3tun_A* 3u1z_A* 4eg4_A* 4eg7_A* 4ega_A* Back     alignment and structure
>1ffy_A Isoleucyl-tRNA synthetase; protein-RNA complex, metal IONS, editing tRNA synthetase, double-sieve, ligase/RNA, mupiroci; HET: MRC; 2.20A {Staphylococcus aureus} SCOP: a.27.1.1 b.51.1.1 c.26.1.1 PDB: 1qu2_A* 1qu3_A* Back     alignment and structure
>1gax_A Valrs, valyl-tRNA synthetase; protein-RNA complex, rossmann fold, coiled coil, riken structural genomics/proteomics initiative, RSGI; HET: VAA; 2.90A {Thermus thermophilus} SCOP: a.2.7.3 a.27.1.1 b.51.1.1 c.26.1.1 PDB: 1ivs_A* 1iyw_A Back     alignment and structure
>1wz2_A Leucyl-tRNA synthetase; ligase, riken structural genomics/proteomics initiativ structural genomics, ligase-RNA complex; 3.21A {Pyrococcus horikoshii} Back     alignment and structure
>2cyb_A Tyrosyl-tRNA synthetase; rossmann-fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: TYR; 1.80A {Archaeoglobus fulgidus} Back     alignment and structure
>1n3l_A Tyrosyl-tRNA synthetase; rossmann fold AS catalytic domain, unique anticodon recognit domain, dimer, ligase; 1.18A {Homo sapiens} SCOP: c.26.1.1 PDB: 1q11_A* Back     alignment and structure
>2dlc_X Tyrosyl-tRNA synthetase, cytoplasmic; tyrrs, ligase-tRNA complex; HET: 2MG OMG M2G PSU 6IA 5MC 5MU 1MA YMP; 2.40A {Saccharomyces cerevisiae} Back     alignment and structure
>2pid_A Tyrosyl-tRNA synthetase; aminoacyl-tRNA synthetase, protein-substrate complex, ATP-BI ligase, mitochondrion, nucleotide-binding, protein biosynth; HET: YSA; 2.20A {Homo sapiens} PDB: 3zxi_A* Back     alignment and structure
>2yxn_A Tyrosyl-tRNA synthetase; tRNA synthetases class I, structural genomics, NPPSFA, natio project on protein structural and functional analyses; HET: AZY; 1.80A {Escherichia coli str} PDB: 1wq3_A* 1wq4_A* 1x8x_A* 1vbn_A* 1vbm_A* Back     alignment and structure
>2jan_A Tyrosyl-tRNA synthetase; protein biosynthesis, aminoacyl-tRNA synthetase, tyrrs, ligase, tyrosine, RNA-binding, ATP-binding; 2.9A {Mycobacterium tuberculosis} Back     alignment and structure
>2ts1_A Tyrosyl-tRNA synthetase; ligase (synthetase); 2.30A {Geobacillus stearothermophilus} SCOP: c.26.1.1 PDB: 3ts1_A* 1tyd_E* 1tya_E* 1tyc_A 1tyb_E* 4ts1_A* 1jh3_A Back     alignment and structure
>1jil_A Tyrrs, tyrosyl-tRNA synthetase; truncation, based inhibitor design, ligase; HET: 485; 2.20A {Staphylococcus aureus} SCOP: c.26.1.1 PDB: 1jij_A* 1jii_A* 1jik_A* Back     alignment and structure
>1h3f_A Tyrosyl-tRNA synthetase; ligase, aminoacyl-tRNA synthetase; HET: TYE; 2.00A {Thermus thermophilus} SCOP: c.26.1.1 d.66.1.4 PDB: 1h3e_A* Back     alignment and structure
>2g36_A Tryptophanyl-tRNA synthetase; TM0492, structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI, ligase; HET: TRP; 2.50A {Thermotoga maritima} Back     alignment and structure
>3tzl_A Tryptophanyl-tRNA synthetase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta structure; HET: ADP TRP; 2.15A {Campylobacter jejuni subsp} SCOP: c.26.1.0 PDB: 3m5w_A* Back     alignment and structure
>2el7_A Tryptophanyl-tRNA synthetase; aminoacyl-tRNA synthetase, translation, structural GEN NPPSFA; 2.50A {Thermus thermophilus} Back     alignment and structure
>2ip1_A Tryptophanyl-tRNA synthetase; rossmann fold, structural genomics, PSI-2, protein structure initiative; HET: PG4; 1.80A {Saccharomyces cerevisiae} PDB: 3kt0_A* 3kt3_A* 3kt6_A* 3kt8_A* Back     alignment and structure
>3i05_A Tryptophanyl-tRNA synthetase; APO tRNA-ligase, ATP-binding, aminoacyl-tRNA synthetase, LIG nucleotide-binding, protein biosynthesis; 2.80A {Trypanosoma brucei} SCOP: c.26.1.0 Back     alignment and structure
>2cya_A Tyrosyl-tRNA synthetase; tyrrs, aminoacylation, structural genomics, NPPSFA, national on protein structural and functional analyses; 2.20A {Aeropyrum pernix} Back     alignment and structure
>1r6u_A Tryptophanyl-tRNA synthetase; class IC tRNA synthetase, rossmann fold catalytic domain, AN recognition domain, bound Trp-AMP, ligase; HET: TYM; 2.00A {Homo sapiens} SCOP: c.26.1.1 PDB: 1ulh_A 2dr2_A* 2ake_A* 1o5t_A Back     alignment and structure
>1r6t_A Tryptophanyl-tRNA synthetase; class IC tRNA synthetase, rossmann fold catalytical domain, recognition domain, bound Trp-AMP, ligase; HET: TYM; 2.10A {Homo sapiens} SCOP: a.16.1.3 c.26.1.1 PDB: 2azx_A* 2quh_A* 2qui_A* 2quj_A* 2quk_A Back     alignment and structure
>3hzr_A Tryptophanyl-tRNA synthetase; APO tRNA-ligase, structural genomics, medical structural GEN pathogenic protozoa, MSGPP, ligase; 3.00A {Entamoeba histolytica} Back     alignment and structure
>3hv0_A Tryptophanyl-tRNA synthetase; tRNA-ligase, ATP-binding, aminoacyl-tRNA synthetase, ligase, nucleotide-binding; HET: TRP; 2.42A {Cryptosporidium parvum iowa II} SCOP: c.26.1.0 Back     alignment and structure
>1yi8_B Tryptophanyl-tRNA synthetase; ligase; HET: TRP; 2.10A {Deinococcus radiodurans} PDB: 1yia_B* 1yid_B* 2a4m_A* Back     alignment and structure
>1y42_X Tyrosyl-tRNA synthetase, mitochondrial; CYT-18, tRNA ligase, group I intron; HET: TYR; 1.95A {Neurospora crassa} PDB: 2rkj_A Back     alignment and structure
>3tze_A Tryptophanyl-tRNA synthetase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, amino acylation; HET: TRP; 2.60A {Encephalitozoon cuniculi} Back     alignment and structure
>3jxe_A Tryptophanyl-tRNA synthetase; adenosine triphosphate, rossmann fold, crystallography, X-RAY, P. horikoshii, aminoacyl-tRNA synthetase; HET: TYM; 3.00A {Pyrococcus horikoshii} Back     alignment and structure
>1i6k_A TRPRS, tryptophanyl-tRNA synthetase; class I tRNA synthetase, AARS, induced FIT, ligase; HET: TYM; 1.72A {Geobacillus stearothermophilus} SCOP: c.26.1.1 PDB: 1i6l_A* 1i6m_A* 1m83_A* 1mau_A* 1maw_A* 1mb2_A* 2ov4_A* 3fhj_A* 3fi0_A* 1d2r_A 3u1v_A Back     alignment and structure
>2zp1_A Tyrosyl-tRNA synthetase; tRNA synthetases class I, ligase, aminoacyl-tRNA synthetase, ATP-binding, cytoplasm, nucleotide-binding; HET: IYR; 1.70A {Methanocaldococcus jannaschii} PDB: 1zh6_A* 1j1u_A* 1u7d_A 2q1g_A* 2pxh_A* 1zh0_A* 2q1i_A* 2ag6_A* 3qe4_A* 3d6u_A* 3d6v_A* 1u7x_A 3n2y_A* 2hgz_A* Back     alignment and structure
>3vgj_A Tyrosyl-tRNA synthetase, putative; tyrrs, ligase; HET: YAP; 2.21A {Plasmodium falciparum} Back     alignment and structure
>2j5b_A Tyrosyl-tRNA synthetase; ligase, protein biosynthesis, ATP-binding; HET: TYE; 2.20A {Acanthamoeba polyphaga mimivirus} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 1458
d1f7ua2348 c.26.1.1 (A:136-483) Arginyl-tRNA synthetase (ArgR 1e-71
d1f7ua2348 c.26.1.1 (A:136-483) Arginyl-tRNA synthetase (ArgR 1e-45
d1f7ua2 348 c.26.1.1 (A:136-483) Arginyl-tRNA synthetase (ArgR 5e-45
d1iq0a2370 c.26.1.1 (A:97-466) Arginyl-tRNA synthetase (ArgRS 5e-66
d1iq0a2370 c.26.1.1 (A:97-466) Arginyl-tRNA synthetase (ArgRS 2e-38
d1iq0a2 370 c.26.1.1 (A:97-466) Arginyl-tRNA synthetase (ArgRS 2e-38
d1f7ua1124 a.27.1.1 (A:484-607) Arginyl-tRNA synthetase (ArgR 3e-23
d1iq0a1126 a.27.1.1 (A:467-592) Arginyl-tRNA synthetase (ArgR 8e-22
d1irxa2317 c.26.1.1 (A:3-319) Class I lysyl-tRNA synthetase { 2e-14
d1irxa2317 c.26.1.1 (A:3-319) Class I lysyl-tRNA synthetase { 1e-09
d1irxa2317 c.26.1.1 (A:3-319) Class I lysyl-tRNA synthetase { 1e-09
d1li5a2315 c.26.1.1 (A:1-315) Cysteinyl-tRNA synthetase (CysR 3e-09
d1li5a2315 c.26.1.1 (A:1-315) Cysteinyl-tRNA synthetase (CysR 1e-07
d1li5a2315 c.26.1.1 (A:1-315) Cysteinyl-tRNA synthetase (CysR 1e-07
d1iq0a396 d.67.2.1 (A:1-96) Arginyl-tRNA synthetase (ArgRS), 2e-07
d1iq0a396 d.67.2.1 (A:1-96) Arginyl-tRNA synthetase (ArgRS), 2e-07
d1iq0a396 d.67.2.1 (A:1-96) Arginyl-tRNA synthetase (ArgRS), 2e-07
d1ivsa4425 c.26.1.1 (A:1-189,A:343-578) Valyl-tRNA synthetase 8e-06
d1ivsa4425 c.26.1.1 (A:1-189,A:343-578) Valyl-tRNA synthetase 9e-06
d1ivsa4 425 c.26.1.1 (A:1-189,A:343-578) Valyl-tRNA synthetase 9e-06
d2d5ba2348 c.26.1.1 (A:1-348) Methionyl-tRNA synthetase (MetR 3e-05
d2d5ba2348 c.26.1.1 (A:1-348) Methionyl-tRNA synthetase (MetR 3e-05
d2d5ba2 348 c.26.1.1 (A:1-348) Methionyl-tRNA synthetase (MetR 3e-05
d1pfva2350 c.26.1.1 (A:4-140,A:176-388) Methionyl-tRNA synthe 1e-04
d1pfva2350 c.26.1.1 (A:4-140,A:176-388) Methionyl-tRNA synthe 1e-04
d1pfva2 350 c.26.1.1 (A:4-140,A:176-388) Methionyl-tRNA synthe 1e-04
d1f7ua3134 d.67.2.1 (A:2-135) Arginyl-tRNA synthetase (ArgRS) 7e-04
d1f7ua3134 d.67.2.1 (A:2-135) Arginyl-tRNA synthetase (ArgRS) 7e-04
d1f7ua3134 d.67.2.1 (A:2-135) Arginyl-tRNA synthetase (ArgRS) 7e-04
d1ilea3452 c.26.1.1 (A:1-197,A:387-641) Isoleucyl-tRNA synthe 8e-04
d1ilea3452 c.26.1.1 (A:1-197,A:387-641) Isoleucyl-tRNA synthe 8e-04
d1ilea3 452 c.26.1.1 (A:1-197,A:387-641) Isoleucyl-tRNA synthe 8e-04
d1rqga2361 c.26.1.1 (A:1-138,A:174-396) Methionyl-tRNA synthe 0.001
d1rqga2361 c.26.1.1 (A:1-138,A:174-396) Methionyl-tRNA synthe 0.001
d1rqga2 361 c.26.1.1 (A:1-138,A:174-396) Methionyl-tRNA synthe 0.001
>d1f7ua2 c.26.1.1 (A:136-483) Arginyl-tRNA synthetase (ArgRS) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 348 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Adenine nucleotide alpha hydrolase-like
superfamily: Nucleotidylyl transferase
family: Class I aminoacyl-tRNA synthetases (RS), catalytic domain
domain: Arginyl-tRNA synthetase (ArgRS)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  241 bits (616), Expect = 1e-71
 Identities = 94/353 (26%), Positives = 148/353 (41%), Gaps = 19/353 (5%)

Query: 600 LNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGM 659
           L +  +V+++FSSPNIAK  H GHLRSTIIG  ++ L E LG +V+R+N++GDWG QFG+
Sbjct: 4   LVENKKVIIEFSSPNIAKPFHAGHLRSTIIGGFLANLYEKLGWEVIRMNYLGDWGKQFGL 63

Query: 660 LIAHLQDKFPDYLTKSPPIADLQAFYKESKKRFDED-------EIFKKRAYQCVVALQRF 712
           L    +    +      PI  L   Y    K  +E+       +    +A +    ++  
Sbjct: 64  LAVGFERYGNEEALVKDPIHHLFDVYVRINKDIEEEGDSIPLEQSTNGKAREYFKRMEDG 123

Query: 713 DPDYKKAWEMICDVSRRDFQKIYDRLNVTLTERGESFYQKH--MEQLVPYLEKKGLLELD 770
           D +  K W+   + S   +   Y RLN+               M + +   ++KGL   D
Sbjct: 124 DEEALKIWKRFREFSIEKYIDTYARLNIKYDVYSGESQVSKESMLKAIDLFKEKGLTHED 183

Query: 771 DGRKIMWGEDRGSIP--MTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVH 828
            G  ++             + KSDG   Y T D+ A   R E+   D ++YV    Q +H
Sbjct: 184 KGAVLIDLTKFNKKLGKAIVQKSDGTTLYLTRDVGAAMDRYEKYHFDKMIYVIASQQDLH 243

Query: 829 FRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLD 888
                E  K+ G       +    G         +   TR G  V L  +L+E   +  +
Sbjct: 244 AAQFFEILKQMGFEWAKDLQHVNFGM-------VQGMSTRKGTVVFLDNILEETKEKMHE 296

Query: 889 KLKDKNRHTELTPTELSEAQQAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRG 941
            +K KN +         E    V    +   D+   R  +Y F +++ML   G
Sbjct: 297 VMK-KNENKYAQIEHPEEVADLVGISAVMIQDMQGKRINNYEFKWERMLSFEG 348
>d1f7ua2 c.26.1.1 (A:136-483) Arginyl-tRNA synthetase (ArgRS) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 348 Back     information, alignment and structure
>d1f7ua2 c.26.1.1 (A:136-483) Arginyl-tRNA synthetase (ArgRS) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 348 Back     information, alignment and structure
>d1iq0a2 c.26.1.1 (A:97-466) Arginyl-tRNA synthetase (ArgRS) {Thermus thermophilus [TaxId: 274]} Length = 370 Back     information, alignment and structure
>d1iq0a2 c.26.1.1 (A:97-466) Arginyl-tRNA synthetase (ArgRS) {Thermus thermophilus [TaxId: 274]} Length = 370 Back     information, alignment and structure
>d1iq0a2 c.26.1.1 (A:97-466) Arginyl-tRNA synthetase (ArgRS) {Thermus thermophilus [TaxId: 274]} Length = 370 Back     information, alignment and structure
>d1f7ua1 a.27.1.1 (A:484-607) Arginyl-tRNA synthetase (ArgRS) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 124 Back     information, alignment and structure
>d1iq0a1 a.27.1.1 (A:467-592) Arginyl-tRNA synthetase (ArgRS) {Thermus thermophilus [TaxId: 274]} Length = 126 Back     information, alignment and structure
>d1irxa2 c.26.1.1 (A:3-319) Class I lysyl-tRNA synthetase {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Length = 317 Back     information, alignment and structure
>d1irxa2 c.26.1.1 (A:3-319) Class I lysyl-tRNA synthetase {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Length = 317 Back     information, alignment and structure
>d1irxa2 c.26.1.1 (A:3-319) Class I lysyl-tRNA synthetase {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Length = 317 Back     information, alignment and structure
>d1li5a2 c.26.1.1 (A:1-315) Cysteinyl-tRNA synthetase (CysRS) {Escherichia coli [TaxId: 562]} Length = 315 Back     information, alignment and structure
>d1li5a2 c.26.1.1 (A:1-315) Cysteinyl-tRNA synthetase (CysRS) {Escherichia coli [TaxId: 562]} Length = 315 Back     information, alignment and structure
>d1li5a2 c.26.1.1 (A:1-315) Cysteinyl-tRNA synthetase (CysRS) {Escherichia coli [TaxId: 562]} Length = 315 Back     information, alignment and structure
>d1iq0a3 d.67.2.1 (A:1-96) Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain {Thermus thermophilus [TaxId: 274]} Length = 96 Back     information, alignment and structure
>d1iq0a3 d.67.2.1 (A:1-96) Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain {Thermus thermophilus [TaxId: 274]} Length = 96 Back     information, alignment and structure
>d1iq0a3 d.67.2.1 (A:1-96) Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain {Thermus thermophilus [TaxId: 274]} Length = 96 Back     information, alignment and structure
>d1ivsa4 c.26.1.1 (A:1-189,A:343-578) Valyl-tRNA synthetase (ValRS) {Thermus thermophilus [TaxId: 274]} Length = 425 Back     information, alignment and structure
>d1ivsa4 c.26.1.1 (A:1-189,A:343-578) Valyl-tRNA synthetase (ValRS) {Thermus thermophilus [TaxId: 274]} Length = 425 Back     information, alignment and structure
>d1ivsa4 c.26.1.1 (A:1-189,A:343-578) Valyl-tRNA synthetase (ValRS) {Thermus thermophilus [TaxId: 274]} Length = 425 Back     information, alignment and structure
>d2d5ba2 c.26.1.1 (A:1-348) Methionyl-tRNA synthetase (MetRS) {Thermus thermophilus [TaxId: 274]} Length = 348 Back     information, alignment and structure
>d2d5ba2 c.26.1.1 (A:1-348) Methionyl-tRNA synthetase (MetRS) {Thermus thermophilus [TaxId: 274]} Length = 348 Back     information, alignment and structure
>d2d5ba2 c.26.1.1 (A:1-348) Methionyl-tRNA synthetase (MetRS) {Thermus thermophilus [TaxId: 274]} Length = 348 Back     information, alignment and structure
>d1pfva2 c.26.1.1 (A:4-140,A:176-388) Methionyl-tRNA synthetase (MetRS) {Escherichia coli [TaxId: 562]} Length = 350 Back     information, alignment and structure
>d1pfva2 c.26.1.1 (A:4-140,A:176-388) Methionyl-tRNA synthetase (MetRS) {Escherichia coli [TaxId: 562]} Length = 350 Back     information, alignment and structure
>d1pfva2 c.26.1.1 (A:4-140,A:176-388) Methionyl-tRNA synthetase (MetRS) {Escherichia coli [TaxId: 562]} Length = 350 Back     information, alignment and structure
>d1f7ua3 d.67.2.1 (A:2-135) Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 134 Back     information, alignment and structure
>d1f7ua3 d.67.2.1 (A:2-135) Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 134 Back     information, alignment and structure
>d1f7ua3 d.67.2.1 (A:2-135) Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 134 Back     information, alignment and structure
>d1ilea3 c.26.1.1 (A:1-197,A:387-641) Isoleucyl-tRNA synthetase (IleRS) {Thermus thermophilus [TaxId: 274]} Length = 452 Back     information, alignment and structure
>d1ilea3 c.26.1.1 (A:1-197,A:387-641) Isoleucyl-tRNA synthetase (IleRS) {Thermus thermophilus [TaxId: 274]} Length = 452 Back     information, alignment and structure
>d1ilea3 c.26.1.1 (A:1-197,A:387-641) Isoleucyl-tRNA synthetase (IleRS) {Thermus thermophilus [TaxId: 274]} Length = 452 Back     information, alignment and structure
>d1rqga2 c.26.1.1 (A:1-138,A:174-396) Methionyl-tRNA synthetase (MetRS) {Pyrococcus abyssi [TaxId: 29292]} Length = 361 Back     information, alignment and structure
>d1rqga2 c.26.1.1 (A:1-138,A:174-396) Methionyl-tRNA synthetase (MetRS) {Pyrococcus abyssi [TaxId: 29292]} Length = 361 Back     information, alignment and structure
>d1rqga2 c.26.1.1 (A:1-138,A:174-396) Methionyl-tRNA synthetase (MetRS) {Pyrococcus abyssi [TaxId: 29292]} Length = 361 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query1458
d1f7ua2348 Arginyl-tRNA synthetase (ArgRS) {Baker's yeast (Sa 100.0
d1iq0a2370 Arginyl-tRNA synthetase (ArgRS) {Thermus thermophi 100.0
d1f7ua2348 Arginyl-tRNA synthetase (ArgRS) {Baker's yeast (Sa 100.0
d1iq0a2370 Arginyl-tRNA synthetase (ArgRS) {Thermus thermophi 100.0
d1li5a2315 Cysteinyl-tRNA synthetase (CysRS) {Escherichia col 99.95
d1f7ua1124 Arginyl-tRNA synthetase (ArgRS) {Baker's yeast (Sa 99.91
d1irxa2317 Class I lysyl-tRNA synthetase {Archaeon Pyrococcus 99.9
d1iq0a1126 Arginyl-tRNA synthetase (ArgRS) {Thermus thermophi 99.89
d1pfva2350 Methionyl-tRNA synthetase (MetRS) {Escherichia col 99.87
d2d5ba2348 Methionyl-tRNA synthetase (MetRS) {Thermus thermop 99.86
d1ivsa4425 Valyl-tRNA synthetase (ValRS) {Thermus thermophilu 99.86
d1ilea3452 Isoleucyl-tRNA synthetase (IleRS) {Thermus thermop 99.79
d1ffya3450 Isoleucyl-tRNA synthetase (IleRS) {Staphylococcus 99.77
d1irxa2317 Class I lysyl-tRNA synthetase {Archaeon Pyrococcus 99.76
d1rqga2361 Methionyl-tRNA synthetase (MetRS) {Pyrococcus abys 99.73
d1li5a2315 Cysteinyl-tRNA synthetase (CysRS) {Escherichia col 99.71
d1iq0a396 Arginyl-tRNA synthetase (ArgRS), N-terminal 'addit 99.62
d1h3na3494 Leucyl-tRNA synthetase (LeuRS) {Thermus thermophil 99.43
d1f7ua3134 Arginyl-tRNA synthetase (ArgRS), N-terminal 'addit 99.43
d1iq0a396 Arginyl-tRNA synthetase (ArgRS), N-terminal 'addit 99.38
d1j09a2305 Glutamyl-tRNA synthetase (GluRS) {Thermus thermoph 99.33
d2d5ba2348 Methionyl-tRNA synthetase (MetRS) {Thermus thermop 99.28
d1pfva2350 Methionyl-tRNA synthetase (MetRS) {Escherichia col 99.14
d1nzja_286 Glutamyl-Q tRNA-Asp synthetase YadB {Escherichia c 99.12
d1j09a2305 Glutamyl-tRNA synthetase (GluRS) {Thermus thermoph 99.02
d1f7ua3134 Arginyl-tRNA synthetase (ArgRS), N-terminal 'addit 98.96
d1ivsa4 425 Valyl-tRNA synthetase (ValRS) {Thermus thermophilu 98.93
d1nzja_286 Glutamyl-Q tRNA-Asp synthetase YadB {Escherichia c 98.92
d1gtra2331 Glutaminyl-tRNA synthetase (GlnRS) {Escherichia co 98.9
d1pfva1162 Methionyl-tRNA synthetase (MetRS) {Escherichia col 98.5
d1gtra2331 Glutaminyl-tRNA synthetase (GlnRS) {Escherichia co 98.48
d1ilea3 452 Isoleucyl-tRNA synthetase (IleRS) {Thermus thermop 98.47
d1ffya3 450 Isoleucyl-tRNA synthetase (IleRS) {Staphylococcus 98.43
d1rqga1210 Methionyl-tRNA synthetase (MetRS) {Pyrococcus abys 98.35
d1rqga2 361 Methionyl-tRNA synthetase (MetRS) {Pyrococcus abys 98.35
d2d5ba1152 Methionyl-tRNA synthetase (MetRS) {Thermus thermop 98.1
d1h3na3 494 Leucyl-tRNA synthetase (LeuRS) {Thermus thermophil 97.87
d1n3la_339 Tyrosyl-tRNA synthetase (TyrRS) {Human (Homo sapie 94.74
d1h3fa1343 Tyrosyl-tRNA synthetase (TyrRS) {Thermus thermophi 92.44
>d1f7ua2 c.26.1.1 (A:136-483) Arginyl-tRNA synthetase (ArgRS) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Adenine nucleotide alpha hydrolase-like
superfamily: Nucleotidylyl transferase
family: Class I aminoacyl-tRNA synthetases (RS), catalytic domain
domain: Arginyl-tRNA synthetase (ArgRS)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=1.6e-64  Score=596.62  Aligned_cols=334  Identities=29%  Similarity=0.449  Sum_probs=286.3

Q ss_pred             CCCCceEEEEeeCCccCCccccchhhHHHHHHHHHHHHHHcCCcEEEEeecCCchhHHHHHHHHHHhhcCCCCCCCCChh
Q psy15414        600 LNKKLRVLVDFSSPNIAKEMHVGHLRSTIIGDTISRLLEYLGHDVVRLNHVGDWGTQFGMLIAHLQDKFPDYLTKSPPIA  679 (1458)
Q Consensus       600 ~~~~~kV~VE~~SpNp~kplHIGHlRsaiIGD~LaRil~~~Gy~V~r~~yInD~G~Qi~~l~~~~~~~~~~~~~~~~~i~  679 (1458)
                      +++++||+||||||||||||||||+|||||||+|+|||+++||+|+|+|||||||+||++++.++............++.
T Consensus         4 ~~~~kki~vE~~SaNpt~plHvGH~R~aiiGd~larlL~~~G~~V~re~yvnD~G~Qi~~l~~~~~~~~~~~~~~~~~~~   83 (348)
T d1f7ua2           4 LVENKKVIIEFSSPNIAKPFHAGHLRSTIIGGFLANLYEKLGWEVIRMNYLGDWGKQFGLLAVGFERYGNEEALVKDPIH   83 (348)
T ss_dssp             CSSCCEEEEECCCCBTTSCCBGGGHHHHHHHHHHHHHHHHTTCEEEEEEEEBCCSHHHHHHHHHHHHHCCHHHHHHCHHH
T ss_pred             CCCCCEEEEEecCCCCCCCcchhhhhhHHHHHHHHHHHHHCCCeEEEEEEECCchHHHHHHHHHHHHhccccccccccch
Confidence            46899999999999999999999999999999999999999999999999999999999999988543221111123456


Q ss_pred             HHHHHHHHhhhccCC-------cHHHHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhCCEEec-cccc-cc
Q psy15414        680 DLQAFYKESKKRFDE-------DEIFKKRAYQCVVALQRFDPDYKKAWEMICDVSRRDFQKIYDRLNVTLTE-RGES-FY  750 (1458)
Q Consensus       680 ~l~~iy~~~~~~~~~-------~~~~~~~a~~~~~~le~gd~e~~~lw~~~~~~s~~~f~~~y~~L~i~f~~-~geS-~~  750 (1458)
                      ++.++|.+..+.+++       .+.+.+++++.+.+++.+|++++++|+.+++++++.+.++|++|||.|+. .+|| ++
T Consensus        84 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~l~~~~~~~~~l~i~fD~~~~Es~~~  163 (348)
T d1f7ua2          84 HLFDVYVRINKDIEEEGDSIPLEQSTNGKAREYFKRMEDGDEEALKIWKRFREFSIEKYIDTYARLNIKYDVYSGESQVS  163 (348)
T ss_dssp             HHHHHHHHHHHHHHHSTTSSCHHHHSSHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHTTCCCSEEEEGGGCC
T ss_pred             hHHHHHHHHHhhhcccchhhhhhhhhHhHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhccccc
Confidence            667777766554432       35677888999999999999999999999999999999999999998753 3455 45


Q ss_pred             chhHHHHHHHHHHcCCeEeeCCcEEEEcCCCC-CC-CcEEEcCCCCccCCCcchHHHHHHhhhcCCCeEEEEeeCCcccc
Q psy15414        751 QKHMEQLVPYLEKKGLLELDDGRKIMWGEDRG-SI-PMTIVKSDGGFTYDTSDLAAIRQRIEEEKADWIVYVTDLGQGVH  828 (1458)
Q Consensus       751 ~~~v~~vi~~L~~kG~~ye~dGa~~~~~d~~d-~~-~~vL~ksDGt~tY~trDiA~~~~k~~~~~~d~iIyVvg~dq~~h  828 (1458)
                      .....++++.|.++|++++++|++|++..... .. +++++||||++||+|+|||||++|+.+++||++|||||++|++|
T Consensus       164 ~~~~~~v~~~L~~~~~~~~~~ga~~~~~~~~g~~~~~~vl~ksDG~~tY~t~DiAy~~~K~~~~~~D~~I~V~g~dq~~~  243 (348)
T d1f7ua2         164 KESMLKAIDLFKEKGLTHEDKGAVLIDLTKFNKKLGKAIVQKSDGTTLYLTRDVGAAMDRYEKYHFDKMIYVIASQQDLH  243 (348)
T ss_dssp             HHHHHHHHHHHHHTTCEEEETTEEEEEGGGTCTTTCEEEEECTTSCCCHHHHHHHHHHHHHHHHCCSEEEEECCGGGHHH
T ss_pred             ccchHHHHHHHHhhccccccCCcccccchhhccccccceeccCCCccceecchHHhhhhhhhccCCCEEEEecccccchh
Confidence            56677899999999999999999999765322 13 34678999999999999999999998889999999999999999


Q ss_pred             HHHHHHHHHHcCCCCCCcceEEEEEeEEEecCCCcccccccCCccchHHHHHHHHHHHHHHHhhcCCCCCCChhhhHHHH
Q psy15414        829 FRLLEECAKKAGILNPNKTRMDFVGFGVVLGEDRKKFKTRSGDTVKLSELLDEGLRRSLDKLKDKNRHTELTPTELSEAQ  908 (1458)
Q Consensus       829 f~~l~~il~alG~~~~~~~~~~H~~fg~V~~~~G~KMSKR~GnvI~l~DLLde~~~~a~~~~~~~~~~~~~~~ee~~~~a  908 (1458)
                      |+|++++++++|+.  .+..+.|+.||+|.     |||||+||+|+++|||+++.++|.+.+.++.. ...+.++.+++|
T Consensus       244 ~~~l~~~l~~lg~~--~~~~~~h~~~g~v~-----kMStR~G~~i~l~dll~e~~~~a~~~~~~~~~-~~~~~~~~~~ia  315 (348)
T d1f7ua2         244 AAQFFEILKQMGFE--WAKDLQHVNFGMVQ-----GMSTRKGTVVFLDNILEETKEKMHEVMKKNEN-KYAQIEHPEEVA  315 (348)
T ss_dssp             HHHHHHHHHHTTCG--GGGGEEEECCCCEE-----SCCGGGTCCCBHHHHHHHHHHHHHHHHHTCHH-HHTTCSCHHHHH
T ss_pred             hhhHHHHHHHhCCC--cccceeeecCCccc-----cccccCCCceEHHHHHHHHHHHHHHHHHhccC-cCCChhhHHHHH
Confidence            99999999999973  45679999999984     79999999999999999999999888866432 223445678999


Q ss_pred             HhhhhhheeeeeecCCCCCccccchhhHHhhhc
Q psy15414        909 QAVAYGCIKYADLSHNRNLDYVFSFDKMLDDRG  941 (1458)
Q Consensus       909 d~v~~~alRy~lLs~~~~~d~~Fd~d~~l~~n~  941 (1458)
                      +.||++||||++|+.+|.++++||||++++++|
T Consensus       316 ~~vgv~ai~y~~L~~~~~~~~~Fd~d~~l~~eG  348 (348)
T d1f7ua2         316 DLVGISAVMIQDMQGKRINNYEFKWERMLSFEG  348 (348)
T ss_dssp             HHHHHHHHHHHHHSSCTTCCEECCHHHHHCCSS
T ss_pred             HHhhHHheehhhhhcCCCCCCEECHHHhcCCCC
Confidence            999999999999999999999999999999875
>d1iq0a2 c.26.1.1 (A:97-466) Arginyl-tRNA synthetase (ArgRS) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1f7ua2 c.26.1.1 (A:136-483) Arginyl-tRNA synthetase (ArgRS) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1iq0a2 c.26.1.1 (A:97-466) Arginyl-tRNA synthetase (ArgRS) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1li5a2 c.26.1.1 (A:1-315) Cysteinyl-tRNA synthetase (CysRS) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1f7ua1 a.27.1.1 (A:484-607) Arginyl-tRNA synthetase (ArgRS) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1irxa2 c.26.1.1 (A:3-319) Class I lysyl-tRNA synthetase {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure
>d1iq0a1 a.27.1.1 (A:467-592) Arginyl-tRNA synthetase (ArgRS) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1pfva2 c.26.1.1 (A:4-140,A:176-388) Methionyl-tRNA synthetase (MetRS) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2d5ba2 c.26.1.1 (A:1-348) Methionyl-tRNA synthetase (MetRS) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1ivsa4 c.26.1.1 (A:1-189,A:343-578) Valyl-tRNA synthetase (ValRS) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1ilea3 c.26.1.1 (A:1-197,A:387-641) Isoleucyl-tRNA synthetase (IleRS) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1ffya3 c.26.1.1 (A:1-200,A:395-644) Isoleucyl-tRNA synthetase (IleRS) {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
>d1irxa2 c.26.1.1 (A:3-319) Class I lysyl-tRNA synthetase {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure
>d1rqga2 c.26.1.1 (A:1-138,A:174-396) Methionyl-tRNA synthetase (MetRS) {Pyrococcus abyssi [TaxId: 29292]} Back     information, alignment and structure
>d1li5a2 c.26.1.1 (A:1-315) Cysteinyl-tRNA synthetase (CysRS) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1iq0a3 d.67.2.1 (A:1-96) Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1h3na3 c.26.1.1 (A:1-225,A:418-686) Leucyl-tRNA synthetase (LeuRS) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1f7ua3 d.67.2.1 (A:2-135) Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1iq0a3 d.67.2.1 (A:1-96) Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1j09a2 c.26.1.1 (A:1-305) Glutamyl-tRNA synthetase (GluRS) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d2d5ba2 c.26.1.1 (A:1-348) Methionyl-tRNA synthetase (MetRS) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1pfva2 c.26.1.1 (A:4-140,A:176-388) Methionyl-tRNA synthetase (MetRS) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1nzja_ c.26.1.1 (A:) Glutamyl-Q tRNA-Asp synthetase YadB {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1j09a2 c.26.1.1 (A:1-305) Glutamyl-tRNA synthetase (GluRS) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1f7ua3 d.67.2.1 (A:2-135) Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1ivsa4 c.26.1.1 (A:1-189,A:343-578) Valyl-tRNA synthetase (ValRS) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1nzja_ c.26.1.1 (A:) Glutamyl-Q tRNA-Asp synthetase YadB {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1gtra2 c.26.1.1 (A:8-338) Glutaminyl-tRNA synthetase (GlnRS) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1pfva1 a.27.1.1 (A:389-550) Methionyl-tRNA synthetase (MetRS) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1gtra2 c.26.1.1 (A:8-338) Glutaminyl-tRNA synthetase (GlnRS) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1ilea3 c.26.1.1 (A:1-197,A:387-641) Isoleucyl-tRNA synthetase (IleRS) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1ffya3 c.26.1.1 (A:1-200,A:395-644) Isoleucyl-tRNA synthetase (IleRS) {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
>d1rqga1 a.27.1.1 (A:397-606) Methionyl-tRNA synthetase (MetRS) {Pyrococcus abyssi [TaxId: 29292]} Back     information, alignment and structure
>d1rqga2 c.26.1.1 (A:1-138,A:174-396) Methionyl-tRNA synthetase (MetRS) {Pyrococcus abyssi [TaxId: 29292]} Back     information, alignment and structure
>d2d5ba1 a.27.1.1 (A:349-500) Methionyl-tRNA synthetase (MetRS) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1h3na3 c.26.1.1 (A:1-225,A:418-686) Leucyl-tRNA synthetase (LeuRS) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1n3la_ c.26.1.1 (A:) Tyrosyl-tRNA synthetase (TyrRS) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1h3fa1 c.26.1.1 (A:5-347) Tyrosyl-tRNA synthetase (TyrRS) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure