Psyllid ID: psy15576

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------11
Protein Sequence
MNKWLRNSNHKVLQITQTYNSFSQPHYPKLLTVQIAETYISALKASQLIPELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVSDYGLVADLFKAVPELTEKL
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccccccccccccccccEEcccEEEEEHHHHHHHHHHccccccEEEEEcccccccccccccHHHHHHHHHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
ccccccccccEEEEEcccHHHHHccccccccccccccccEccccccEccccEEEEEcccccHHHHcccccccEEEEEEcccccHHHHcccEEEEccHHHHHHHHHHHc
Coil and Loop (DISEMBL)
mnkwlrnsnHKVLQITQTynsfsqphypkLLTVQIAETYISALKASQLIPELYIAVGISGAIQHlagmkdsktivainkdpeapifqvsdygLVADLFKAVPELTEKL
Flexible Loop (DISEMBL)
mnkwlrnsnHKVLQITQTYNSFSQPHYPKLLTVQIAETYISALKASQLIPELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVSDYGLVADLFKAVPELTEKL
Low Complexity Region (SEG)
MNKWLRNSNHKVLQITQTYNSFSQPHYPKLLTVQIAETYISALKASQLIPELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVSDYGLVADLFKAVPELTEKL
Disordered region (IsUnstruct)
*********HKVLQITQTYNSFSQPHYPKLLTVQIAETYISALKASQLIPELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVSDYGLVADLFKAV*******
Disordered Region (DISOPRED)
********NHKVLQITQTYNSFSQPHYPKLLTVQIAETYISALKASQLIPELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVSDYGLVADLFKAVPELTEKL
Disordered Region (DISEMBL)
********NHKVLQITQTYNSFSQPHYPKLLTVQIAETYISALKASQLIPELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVSDYGLVADLFKAVPELTEKL
Disordered Region (DISPRO)
***WLRNSNHKVLQITQTYNSFSQPHYPKLLTVQIAETYISALKASQLIPELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVSDYGLVADLFKAVPELTEKL
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MNKWLRNSNHKVLQITQTYNSFSQPHYPKLLTVQIAETYISALKASQLIPELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVSDYGLVADLFKAVPELTEKL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	108	2.2.26 [Sep-21-2011]
P13804	333	Electron transfer flavopr	yes	N/A	0.546	0.177	0.915	5e-26
Q2KJE4	333	Electron transfer flavopr	yes	N/A	0.546	0.177	0.915	5e-26
Q99LC5	333	Electron transfer flavopr	yes	N/A	0.546	0.177	0.915	2e-25
P13803	333	Electron transfer flavopr	yes	N/A	0.546	0.177	0.915	3e-25
Q5RC31	333	Electron transfer flavopr	yes	N/A	0.546	0.177	0.915	4e-25
Q8HXY0	333	Electron transfer flavopr	N/A	N/A	0.546	0.177	0.915	4e-25
Q93615	332	Probable electron transfe	yes	N/A	0.546	0.177	0.864	6e-24
Q54FD7	355	Electron transfer flavopr	yes	N/A	0.546	0.166	0.847	1e-23
P38974	308	Electron transfer flavopr	yes	N/A	0.546	0.191	0.847	1e-23
P53573	314	Electron transfer flavopr	yes	N/A	0.546	0.187	0.847	2e-23

>sp|P13804|ETFA_HUMAN Electron transfer flavoprotein subunit alpha, mitochondrial OS=Homo sapiens GN=ETFA PE=1 SV=1

 Score =  116 bits (290), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 54/59 (91%), Positives = 57/59 (96%)

Query: 50  PELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVSDYGLVADLFKAVPELTEKL 108
           PELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQV+DYG+VADLFK VPE+TE L
Sbjct: 272 PELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVADYGIVADLFKVVPEMTEIL 330

The electron transfer flavoprotein serves as a specific electron acceptor for several dehydrogenases, including five acyl-CoA dehydrogenases, glutaryl-CoA and sarcosine dehydrogenase. It transfers the electrons to the main mitochondrial respiratory chain via ETF-ubiquinone oxidoreductase (ETF dehydrogenase).
Homo sapiens (taxid: 9606)

>sp|Q2KJE4|ETFA_BOVIN Electron transfer flavoprotein subunit alpha, mitochondrial OS=Bos taurus GN=ETFA PE=2 SV=1

 Score =  116 bits (290), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 54/59 (91%), Positives = 57/59 (96%)

Query: 50  PELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVSDYGLVADLFKAVPELTEKL 108
           PELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQV+DYG+VADLFK VPE+TE L
Sbjct: 272 PELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVADYGIVADLFKVVPEMTELL 330

The electron transfer flavoprotein serves as a specific electron acceptor for several dehydrogenases, including five acyl-CoA dehydrogenases, glutaryl-CoA and sarcosine dehydrogenase. It transfers the electrons to the main mitochondrial respiratory chain via ETF-ubiquinone oxidoreductase (ETF dehydrogenase).

Bos taurus (taxid: 9913)

>sp|Q99LC5|ETFA_MOUSE Electron transfer flavoprotein subunit alpha, mitochondrial OS=Mus musculus GN=Etfa PE=1 SV=2

 Score =  114 bits (284), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 54/59 (91%), Positives = 57/59 (96%)

Query: 50  PELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVSDYGLVADLFKAVPELTEKL 108
           PELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQV+DYG+VADLFK VPE+TE L
Sbjct: 272 PELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVADYGIVADLFKVVPEMTEIL 330

The electron transfer flavoprotein serves as a specific electron acceptor for several dehydrogenases, including five acyl-CoA dehydrogenases, glutaryl-CoA and sarcosine dehydrogenase. It transfers the electrons to the main mitochondrial respiratory chain via ETF-ubiquinone oxidoreductase (ETF dehydrogenase).

Mus musculus (taxid: 10090)

>sp|P13803|ETFA_RAT Electron transfer flavoprotein subunit alpha, mitochondrial OS=Rattus norvegicus GN=Etfa PE=1 SV=4

 Score =  114 bits (284), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 54/59 (91%), Positives = 57/59 (96%)

Query: 50  PELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVSDYGLVADLFKAVPELTEKL 108
           PELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQV+DYG+VADLFK VPE+TE L
Sbjct: 272 PELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVADYGIVADLFKVVPEMTEIL 330

The electron transfer flavoprotein serves as a specific electron acceptor for several dehydrogenases, including five acyl-CoA dehydrogenases, glutaryl-CoA and sarcosine dehydrogenase. It transfers the electrons to the main mitochondrial respiratory chain via ETF-ubiquinone oxidoreductase (ETF dehydrogenase).

Rattus norvegicus (taxid: 10116)

>sp|Q5RC31|ETFA_PONAB Electron transfer flavoprotein subunit alpha, mitochondrial OS=Pongo abelii GN=ETFA PE=2 SV=1

 Score =  113 bits (282), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 54/59 (91%), Positives = 57/59 (96%)

Query: 50  PELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVSDYGLVADLFKAVPELTEKL 108
           PELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQV+DYG+VADLFK VPE+TE L
Sbjct: 272 PELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVADYGIVADLFKVVPEMTEIL 330

The electron transfer flavoprotein serves as a specific electron acceptor for several dehydrogenases, including five acyl-CoA dehydrogenases, glutaryl-CoA and sarcosine dehydrogenase. It transfers the electrons to the main mitochondrial respiratory chain via ETF-ubiquinone oxidoreductase (ETF dehydrogenase).

Pongo abelii (taxid: 9601)

>sp|Q8HXY0|ETFA_MACFA Electron transfer flavoprotein subunit alpha, mitochondrial OS=Macaca fascicularis GN=ETFA PE=2 SV=1

 Score =  113 bits (282), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 54/59 (91%), Positives = 57/59 (96%)

Query: 50  PELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVSDYGLVADLFKAVPELTEKL 108
           PELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQV+DYG+VADLFK VPE+TE L
Sbjct: 272 PELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVADYGIVADLFKVVPEMTEIL 330

The electron transfer flavoprotein serves as a specific electron acceptor for several dehydrogenases, including five acyl-CoA dehydrogenases, glutaryl-CoA and sarcosine dehydrogenase. It transfers the electrons to the main mitochondrial respiratory chain via ETF-ubiquinone oxidoreductase (ETF dehydrogenase).

Macaca fascicularis (taxid: 9541)

>sp|Q93615|ETFA_CAEEL Probable electron transfer flavoprotein subunit alpha, mitochondrial OS=Caenorhabditis elegans GN=F27D4.1 PE=3 SV=2

 Score =  109 bits (272), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 51/59 (86%), Positives = 54/59 (91%)

Query: 50  PELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVSDYGLVADLFKAVPELTEKL 108
           PELYIA+GISGAIQHLAGMKDSK IVAINKDP+APIFQV+D GL ADLFKAVPELT  L
Sbjct: 273 PELYIAIGISGAIQHLAGMKDSKVIVAINKDPDAPIFQVADIGLKADLFKAVPELTAAL 331

The electron transfer flavoprotein serves as a specific electron acceptor for several dehydrogenases, including five acyl-CoA dehydrogenases, glutaryl-CoA and sarcosine dehydrogenase. It transfers the electrons to the main mitochondrial respiratory chain via ETF-ubiquinone oxidoreductase (ETF dehydrogenase).

Caenorhabditis elegans (taxid: 6239)

>sp|Q54FD7|ETFA_DICDI Electron transfer flavoprotein subunit alpha, mitochondrial OS=Dictyostelium discoideum GN=etfa PE=3 SV=1

 Score =  108 bits (270), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 50/59 (84%), Positives = 53/59 (89%)

Query: 50  PELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVSDYGLVADLFKAVPELTEKL 108
           PELYIAVGISGAIQHLAGMKDSK IVAINKDPEAPIFQV+D GLV DLF  VP+LTE +
Sbjct: 293 PELYIAVGISGAIQHLAGMKDSKVIVAINKDPEAPIFQVADVGLVGDLFNEVPKLTESI 351

The electron transfer flavoprotein serves as a specific electron acceptor for several dehydrogenases, including five acyl-CoA dehydrogenases, glutaryl-CoA and sarcosine dehydrogenase. It transfers the electrons to the main mitochondrial respiratory chain via ETF-ubiquinone oxidoreductase (ETF dehydrogenase).

Dictyostelium discoideum (taxid: 44689)

>sp|P38974|ETFA_PARDE Electron transfer flavoprotein subunit alpha OS=Paracoccus denitrificans GN=etfA PE=1 SV=2

 Score =  108 bits (269), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 50/59 (84%), Positives = 53/59 (89%)

Query: 50  PELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVSDYGLVADLFKAVPELTEKL 108
           PELY+AVGISGAIQHLAGMKDSK IVAINKD EAPIFQ++DYGLV DLF  VPELT KL
Sbjct: 250 PELYVAVGISGAIQHLAGMKDSKVIVAINKDEEAPIFQIADYGLVGDLFSVVPELTGKL 308

The electron transfer flavoprotein serves as a specific electron acceptor for other dehydrogenases. It transfers the electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase (ETF dehydrogenase).

Paracoccus denitrificans (taxid: 266)

>sp|P53573|ETFA_BRAJA Electron transfer flavoprotein subunit alpha OS=Bradyrhizobium japonicum (strain USDA 110) GN=etfA PE=3 SV=2

 Score =  107 bits (268), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 50/59 (84%), Positives = 56/59 (94%)

Query: 50  PELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVSDYGLVADLFKAVPELTEKL 108
           PELY+AVGISGAIQHLAGMKDSK IVAINKD +APIFQV+DYGLVADL++AVPELT +L
Sbjct: 251 PELYVAVGISGAIQHLAGMKDSKVIVAINKDEDAPIFQVADYGLVADLYQAVPELTAEL 309

The electron transfer flavoprotein serves as a specific electron acceptor for other dehydrogenases. It transfers the electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase (ETF dehydrogenase).

Bradyrhizobium japonicum (strain USDA 110) (taxid: 224911)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	108
328773160	344	hypothetical protein BATDEDRAFT_18359 [B	0.564	0.177	0.934	3e-26
322800073	333	hypothetical protein SINV_07965 [Solenop	0.546	0.177	0.966	5e-26
383849593	333	PREDICTED: electron transfer flavoprotei	0.546	0.177	0.966	5e-26
225706994	334	Electron transfer flavoprotein subunit a	0.546	0.176	0.966	7e-26
332019963	320	Electron transfer flavoprotein subunit a	0.546	0.184	0.966	7e-26
340727666	333	PREDICTED: electron transfer flavoprotei	0.546	0.177	0.966	7e-26
350423629	333	PREDICTED: electron transfer flavoprotei	0.546	0.177	0.966	9e-26
66526470	333	PREDICTED: electron transfer flavoprotei	0.546	0.177	0.966	9e-26
380028311	310	PREDICTED: electron transfer flavoprotei	0.546	0.190	0.966	1e-25
348505842	333	PREDICTED: electron transfer flavoprotei	0.546	0.177	0.949	1e-25

>gi|328773160|gb|EGF83197.1| hypothetical protein BATDEDRAFT_18359 [Batrachochytrium dendrobatidis JAM81]

 Score =  122 bits (306), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 57/61 (93%), Positives = 60/61 (98%)

Query: 48  LIPELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVSDYGLVADLFKAVPELTEK 107
           + PELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVSDYGLVADLFKA+PELTEK
Sbjct: 282 IAPELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVSDYGLVADLFKAIPELTEK 341

Query: 108 L 108
           +
Sbjct: 342 I 342

Source: Batrachochytrium dendrobatidis JAM81

Species: Batrachochytrium dendrobatidis

Genus: Batrachochytrium

Order: Rhizophydiales

Class: Chytridiomycetes

Phylum: Chytridiomycota

Superkingdom: Eukaryota

>gi|322800073|gb|EFZ21179.1| hypothetical protein SINV_07965 [Solenopsis invicta]

 Score =  121 bits (304), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 57/59 (96%), Positives = 58/59 (98%)

Query: 50  PELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVSDYGLVADLFKAVPELTEKL 108
           P LYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQV+DYGLVADLFKAVPELTEKL
Sbjct: 275 PNLYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVADYGLVADLFKAVPELTEKL 333

Source: Solenopsis invicta

Species: Solenopsis invicta

Genus: Solenopsis

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383849593|ref|XP_003700429.1| PREDICTED: electron transfer flavoprotein subunit alpha, mitochondrial-like [Megachile rotundata]

 Score =  121 bits (304), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 57/59 (96%), Positives = 59/59 (100%)

Query: 50  PELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVSDYGLVADLFKAVPELTEKL 108
           P+LYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQV+DYGLVADLFKAVPELTEKL
Sbjct: 275 PDLYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVADYGLVADLFKAVPELTEKL 333

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|225706994|gb|ACO09343.1| Electron transfer flavoprotein subunit alpha, mitochondrial precursor [Osmerus mordax]

 Score =  120 bits (302), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 57/59 (96%), Positives = 58/59 (98%)

Query: 50  PELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVSDYGLVADLFKAVPELTEKL 108
           PELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQV+DYGLVADLFKAVPELTE L
Sbjct: 273 PELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVADYGLVADLFKAVPELTEAL 331

Source: Osmerus mordax

Species: Osmerus mordax

Genus: Osmerus

Family: Osmeridae

Order: Osmeriformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|332019963|gb|EGI60423.1| Electron transfer flavoprotein subunit alpha, mitochondrial [Acromyrmex echinatior]

 Score =  120 bits (302), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 57/59 (96%), Positives = 58/59 (98%)

Query: 50  PELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVSDYGLVADLFKAVPELTEKL 108
           P LYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQV+DYGLVADLFKAVPELTEKL
Sbjct: 262 PNLYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVADYGLVADLFKAVPELTEKL 320

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340727666|ref|XP_003402160.1| PREDICTED: electron transfer flavoprotein subunit alpha, mitochondrial-like [Bombus terrestris]

 Score =  120 bits (302), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 57/59 (96%), Positives = 58/59 (98%)

Query: 50  PELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVSDYGLVADLFKAVPELTEKL 108
           P LYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQV+DYGLVADLFKAVPELTEKL
Sbjct: 275 PNLYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVADYGLVADLFKAVPELTEKL 333

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350423629|ref|XP_003493541.1| PREDICTED: electron transfer flavoprotein subunit alpha, mitochondrial-like [Bombus impatiens]

 Score =  120 bits (302), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 57/59 (96%), Positives = 58/59 (98%)

Query: 50  PELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVSDYGLVADLFKAVPELTEKL 108
           P LYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQV+DYGLVADLFKAVPELTEKL
Sbjct: 275 PNLYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVADYGLVADLFKAVPELTEKL 333

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|66526470|ref|XP_624102.1| PREDICTED: electron transfer flavoprotein subunit alpha, mitochondrial-like isoform 1 [Apis mellifera]

 Score =  120 bits (301), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 57/59 (96%), Positives = 58/59 (98%)

Query: 50  PELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVSDYGLVADLFKAVPELTEKL 108
           P LYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQV+DYGLVADLFKAVPELTEKL
Sbjct: 275 PNLYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVADYGLVADLFKAVPELTEKL 333

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380028311|ref|XP_003697849.1| PREDICTED: electron transfer flavoprotein subunit alpha, mitochondrial-like [Apis florea]

 Score =  120 bits (301), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 57/59 (96%), Positives = 58/59 (98%)

Query: 50  PELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVSDYGLVADLFKAVPELTEKL 108
           P LYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQV+DYGLVADLFKAVPELTEKL
Sbjct: 252 PNLYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVADYGLVADLFKAVPELTEKL 310

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|348505842|ref|XP_003440469.1| PREDICTED: electron transfer flavoprotein subunit alpha, mitochondrial-like [Oreochromis niloticus]

 Score =  120 bits (300), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 56/59 (94%), Positives = 58/59 (98%)

Query: 50  PELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVSDYGLVADLFKAVPELTEKL 108
           PELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQV+DYGLVADLFKAVPE+TE L
Sbjct: 273 PELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVADYGLVADLFKAVPEMTEAL 331

Source: Oreochromis niloticus

Species: Oreochromis niloticus

Genus: Oreochromis

Family: Cichlidae

Order: Perciformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	108
ZFIN|ZDB-GENE-030131-4449	339	etfa "electron-transfer-flavop	0.546	0.174	0.949	1.2e-24
UNIPROTKB|E1BZW5	323	ETFA "Uncharacterized protein"	0.546	0.182	0.932	2.6e-24
UNIPROTKB|F1MWR3	333	ETFA "Electron transfer flavop	0.546	0.177	0.915	4.2e-24
UNIPROTKB|Q2KJE4	333	ETFA "Electron transfer flavop	0.546	0.177	0.915	4.2e-24
UNIPROTKB|E2RAE2	333	ETFA "Uncharacterized protein"	0.546	0.177	0.915	4.2e-24
UNIPROTKB|F1SJX1	333	ETFA "Uncharacterized protein"	0.546	0.177	0.915	4.2e-24
UNIPROTKB|H0YK49	229	ETFA "Electron transfer flavop	0.546	0.257	0.915	5.3e-24
UNIPROTKB|H0YL83	73	ETFA "Electron transfer flavop	0.546	0.808	0.915	5.3e-24
UNIPROTKB|P13804	333	ETFA "Electron transfer flavop	0.546	0.177	0.915	5.3e-24
MGI|MGI:106092	333	Etfa "electron transferring fl	0.546	0.177	0.915	5.3e-24

ZFIN|ZDB-GENE-030131-4449 etfa "electron-transfer-flavoprotein, alpha polypeptide" [Danio rerio (taxid:7955)]

 Score = 281 (104.0 bits), Expect = 1.2e-24, P = 1.2e-24
 Identities = 56/59 (94%), Positives = 57/59 (96%)

Query:    50 PELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVSDYGLVADLFKAVPELTEKL 108
             PELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQV+DYGLVADLFK VPELTE L
Sbjct:   273 PELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVADYGLVADLFKVVPELTEAL 331

GO:0050660 "flavin adenine dinucleotide binding" evidence=IEA

GO:0009055 "electron carrier activity" evidence=IEA

UNIPROTKB|E1BZW5 ETFA "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 278 (102.9 bits), Expect = 2.6e-24, P = 2.6e-24
 Identities = 55/59 (93%), Positives = 58/59 (98%)

Query:    50 PELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVSDYGLVADLFKAVPELTEKL 108
             PELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQV+DYGLVADLF+AVPE+TE L
Sbjct:   262 PELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVADYGLVADLFQAVPEMTELL 320

GO:0009055 "electron carrier activity" evidence=IEA

GO:0050660 "flavin adenine dinucleotide binding" evidence=IEA

UNIPROTKB|F1MWR3 ETFA "Electron transfer flavoprotein subunit alpha, mitochondrial" [Bos taurus (taxid:9913)]

 Score = 276 (102.2 bits), Expect = 4.2e-24, P = 4.2e-24
 Identities = 54/59 (91%), Positives = 57/59 (96%)

Query:    50 PELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVSDYGLVADLFKAVPELTEKL 108
             PELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQV+DYG+VADLFK VPE+TE L
Sbjct:   272 PELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVADYGIVADLFKVVPEMTELL 330

GO:0050660 "flavin adenine dinucleotide binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0009055 "electron carrier activity" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

UNIPROTKB|Q2KJE4 ETFA "Electron transfer flavoprotein subunit alpha, mitochondrial" [Bos taurus (taxid:9913)]

 Score = 276 (102.2 bits), Expect = 4.2e-24, P = 4.2e-24
 Identities = 54/59 (91%), Positives = 57/59 (96%)

Query:    50 PELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVSDYGLVADLFKAVPELTEKL 108
             PELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQV+DYG+VADLFK VPE+TE L
Sbjct:   272 PELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVADYGIVADLFKVVPEMTELL 330

GO:0005759 "mitochondrial matrix" evidence=IEA

GO:0022900 "electron transport chain" evidence=IEA

GO:0050660 "flavin adenine dinucleotide binding" evidence=IEA

GO:0009055 "electron carrier activity" evidence=IEA

UNIPROTKB|E2RAE2 ETFA "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 276 (102.2 bits), Expect = 4.2e-24, P = 4.2e-24
 Identities = 54/59 (91%), Positives = 57/59 (96%)

Query:    50 PELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVSDYGLVADLFKAVPELTEKL 108
             PELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQV+DYG+VADLFK VPE+TE L
Sbjct:   272 PELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVADYGIVADLFKVVPEMTELL 330

GO:0050660 "flavin adenine dinucleotide binding" evidence=IEA

GO:0009055 "electron carrier activity" evidence=IEA

UNIPROTKB|F1SJX1 ETFA "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 276 (102.2 bits), Expect = 4.2e-24, P = 4.2e-24
 Identities = 54/59 (91%), Positives = 57/59 (96%)

Query:    50 PELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVSDYGLVADLFKAVPELTEKL 108
             PELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQV+DYG+VADLFK VPE+TE L
Sbjct:   272 PELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVADYGIVADLFKVVPEMTELL 330

GO:0050660 "flavin adenine dinucleotide binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0009055 "electron carrier activity" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

UNIPROTKB|H0YK49 ETFA "Electron transfer flavoprotein subunit alpha, mitochondrial" [Homo sapiens (taxid:9606)]

 Score = 275 (101.9 bits), Expect = 5.3e-24, P = 5.3e-24
 Identities = 54/59 (91%), Positives = 57/59 (96%)

Query:    50 PELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVSDYGLVADLFKAVPELTEKL 108
             PELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQV+DYG+VADLFK VPE+TE L
Sbjct:   168 PELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVADYGIVADLFKVVPEMTEIL 226

GO:0005739 "mitochondrion" evidence=IDA

UNIPROTKB|H0YL83 ETFA "Electron transfer flavoprotein subunit alpha, mitochondrial" [Homo sapiens (taxid:9606)]

 Score = 275 (101.9 bits), Expect = 5.3e-24, P = 5.3e-24
 Identities = 54/59 (91%), Positives = 57/59 (96%)

Query:    50 PELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVSDYGLVADLFKAVPELTEKL 108
             PELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQV+DYG+VADLFK VPE+TE L
Sbjct:    12 PELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVADYGIVADLFKVVPEMTEIL 70

GO:0005739 "mitochondrion" evidence=IDA

UNIPROTKB|P13804 ETFA "Electron transfer flavoprotein subunit alpha, mitochondrial" [Homo sapiens (taxid:9606)]

 Score = 275 (101.9 bits), Expect = 5.3e-24, P = 5.3e-24
 Identities = 54/59 (91%), Positives = 57/59 (96%)

Query:    50 PELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVSDYGLVADLFKAVPELTEKL 108
             PELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQV+DYG+VADLFK VPE+TE L
Sbjct:   272 PELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVADYGIVADLFKVVPEMTEIL 330

GO:0050660 "flavin adenine dinucleotide binding" evidence=IDA

GO:0016491 "oxidoreductase activity" evidence=IDA

GO:0009055 "electron carrier activity" evidence=IDA

GO:0005739 "mitochondrion" evidence=TAS

GO:0005759 "mitochondrial matrix" evidence=TAS

GO:0022904 "respiratory electron transport chain" evidence=TAS

GO:0044281 "small molecule metabolic process" evidence=TAS

MGI|MGI:106092 Etfa "electron transferring flavoprotein, alpha polypeptide" [Mus musculus (taxid:10090)]

 Score = 275 (101.9 bits), Expect = 5.3e-24, P = 5.3e-24
 Identities = 54/59 (91%), Positives = 57/59 (96%)

Query:    50 PELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVSDYGLVADLFKAVPELTEKL 108
             PELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQV+DYG+VADLFK VPE+TE L
Sbjct:   272 PELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVADYGIVADLFKVVPEMTEIL 330

GO:0005739 "mitochondrion" evidence=IDA

GO:0006810 "transport" evidence=IEA

GO:0009055 "electron carrier activity" evidence=ISO;TAS

GO:0016491 "oxidoreductase activity" evidence=ISO

GO:0017133 "mitochondrial electron transfer flavoprotein complex" evidence=TAS

GO:0022900 "electron transport chain" evidence=IEA

GO:0050660 "flavin adenine dinucleotide binding" evidence=ISO

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
B7UI88	FIXB_ECO27	No assigned EC number	0.6229	0.5648	0.1948	yes	N/A
B7L4G5	FIXB_ECO55	No assigned EC number	0.6229	0.5648	0.1948	yes	N/A
Q75LJ3	ETFA_ORYSJ	No assigned EC number	0.7288	0.5462	0.1648	yes	N/A
Q99LC5	ETFA_MOUSE	No assigned EC number	0.9152	0.5462	0.1771	yes	N/A
B6HYZ3	FIXB_ECOSE	No assigned EC number	0.6229	0.5648	0.1948	yes	N/A
B7M0D9	FIXB_ECO8A	No assigned EC number	0.6229	0.5648	0.1948	yes	N/A
P71153	ETFA_THETC	No assigned EC number	0.6949	0.5462	0.1787	yes	N/A
Q5Y223	ETFA_CRYGW	No assigned EC number	0.7627	0.5462	0.1705	yes	N/A
Q32K55	FIXB_SHIDS	No assigned EC number	0.6229	0.5648	0.1948	yes	N/A
B5YYD6	FIXB_ECO5E	No assigned EC number	0.6229	0.5648	0.1948	yes	N/A
B1IRD4	FIXB_ECOLC	No assigned EC number	0.6229	0.5648	0.1948	yes	N/A
Q8HXY0	ETFA_MACFA	No assigned EC number	0.9152	0.5462	0.1771	N/A	N/A
A7ZVZ4	FIXB_ECOHS	No assigned EC number	0.6229	0.5648	0.1948	yes	N/A
B1XBG7	FIXB_ECODH	No assigned EC number	0.6229	0.5648	0.1948	yes	N/A
B7NHE6	FIXB_ECO7I	No assigned EC number	0.6229	0.5648	0.1948	yes	N/A
Q9HZP7	ETFA_PSEAE	No assigned EC number	0.8474	0.5462	0.1909	yes	N/A
B7MNP9	FIXB_ECO81	No assigned EC number	0.6229	0.5648	0.1948	yes	N/A
Q0TLU7	FIXB_ECOL5	No assigned EC number	0.6229	0.5648	0.1948	yes	N/A
A1A792	FIXB_ECOK1	No assigned EC number	0.6229	0.5648	0.1948	yes	N/A
Q3Z5W6	FIXB_SHISS	No assigned EC number	0.6229	0.5648	0.1948	yes	N/A
C4ZPW8	FIXB_ECOBW	No assigned EC number	0.6229	0.5648	0.1948	yes	N/A
O53275	ETFA_MYCTU	No assigned EC number	0.7118	0.5462	0.1855	yes	N/A
Q1RGF6	FIXB_ECOUT	No assigned EC number	0.6229	0.5648	0.1948	yes	N/A
O85692	ETFA_MEGEL	No assigned EC number	0.6271	0.5462	0.1745	yes	N/A
P78790	ETFA_SCHPO	No assigned EC number	0.7213	0.5648	0.1788	yes	N/A
Q9C6I6	ETFA_ARATH	No assigned EC number	0.7627	0.5462	0.1625	yes	N/A
P52039	ETFA_CLOAB	No assigned EC number	0.6440	0.5462	0.1755	yes	N/A
P59675	FIXB_SHIFL	No assigned EC number	0.6229	0.5648	0.1948	yes	N/A
P59674	FIXB_ECOL6	No assigned EC number	0.6229	0.5648	0.1948	yes	N/A
Q93615	ETFA_CAEEL	No assigned EC number	0.8644	0.5462	0.1777	yes	N/A
Q54FD7	ETFA_DICDI	No assigned EC number	0.8474	0.5462	0.1661	yes	N/A
Q5RC31	ETFA_PONAB	No assigned EC number	0.9152	0.5462	0.1771	yes	N/A
P0CN60	ETFA_CRYNJ	No assigned EC number	0.7457	0.5462	0.1705	yes	N/A
P94551	ETFA_BACSU	No assigned EC number	0.7049	0.5648	0.1876	yes	N/A
B7N7R7	FIXB_ECOLU	No assigned EC number	0.6229	0.5648	0.1948	yes	N/A
P38974	ETFA_PARDE	No assigned EC number	0.8474	0.5462	0.1915	yes	N/A
P13804	ETFA_HUMAN	No assigned EC number	0.9152	0.5462	0.1771	yes	N/A
Q2KJE4	ETFA_BOVIN	No assigned EC number	0.9152	0.5462	0.1771	yes	N/A
P13803	ETFA_RAT	No assigned EC number	0.9152	0.5462	0.1771	yes	N/A
B7MAG5	FIXB_ECO45	No assigned EC number	0.6229	0.5648	0.1948	yes	N/A
Q12480	ETFA_YEAST	No assigned EC number	0.7796	0.5462	0.1715	yes	N/A
P53573	ETFA_BRAJA	No assigned EC number	0.8474	0.5462	0.1878	yes	N/A
O33096	ETFA_MYCLE	No assigned EC number	0.6779	0.5462	0.1855	yes	N/A
B1LFX6	FIXB_ECOSM	No assigned EC number	0.6229	0.5648	0.1948	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	108
COG2025	313	COG2025, FixB, Electron transfer flavoprotein, alp	6e-40
PLN00022	356	PLN00022, PLN00022, electron transfer flavoprotein	4e-39
PRK03363	313	PRK03363, fixB, putative electron transfer flavopr	2e-21
PRK11916	312	PRK11916, PRK11916, electron transfer flavoprotein	9e-20
pfam00766	86	pfam00766, ETF_alpha, Electron transfer flavoprote	9e-13

>gnl|CDD|224936 COG2025, FixB, Electron transfer flavoprotein, alpha subunit [Energy production and conversion]

 Score =  134 bits (339), Expect = 6e-40
 Identities = 48/59 (81%), Positives = 52/59 (88%)

Query: 50  PELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVSDYGLVADLFKAVPELTEKL 108
           P+LYIA+GISGAIQHLAGMKDSK IVAINKDP APIFQV+DYG+V DLFK VP L E L
Sbjct: 252 PKLYIALGISGAIQHLAGMKDSKVIVAINKDPNAPIFQVADYGIVGDLFKIVPALIEAL 310

Length = 313

>gnl|CDD|215032 PLN00022, PLN00022, electron transfer flavoprotein subunit alpha; Provisional

 Score =  132 bits (335), Expect = 4e-39
 Identities = 53/59 (89%), Positives = 56/59 (94%)

Query: 50  PELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVSDYGLVADLFKAVPELTEKL 108
           PELYIAVGISGAIQHLAGMKDSK IVAINKD +APIFQV+DYGLVADLF+AVPEL EKL
Sbjct: 294 PELYIAVGISGAIQHLAGMKDSKVIVAINKDADAPIFQVADYGLVADLFEAVPELLEKL 352

Length = 356

>gnl|CDD|235120 PRK03363, fixB, putative electron transfer flavoprotein FixB; Provisional

 Score = 85.8 bits (212), Expect = 2e-21
 Identities = 38/61 (62%), Positives = 44/61 (72%)

Query: 48  LIPELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVSDYGLVADLFKAVPELTEK 107
           L PELY+AVGISG IQH+ G   S+TI AINKD  APIFQ +DYG+V D  K +P LT  
Sbjct: 251 LKPELYLAVGISGQIQHMVGANASQTIFAINKDKNAPIFQYADYGIVGDAVKILPALTAA 310

Query: 108 L 108
           L
Sbjct: 311 L 311

Length = 313

>gnl|CDD|183380 PRK11916, PRK11916, electron transfer flavoprotein subunit YdiR; Provisional

 Score = 81.1 bits (200), Expect = 9e-20
 Identities = 37/72 (51%), Positives = 47/72 (65%), Gaps = 1/72 (1%)

Query: 37  ETYISALKASQLIPELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVSDYGLVAD 96
           E YI  +    L  +LY+ +GISG IQH+ G   +K IVAINKD  APIF  +DYGLV D
Sbjct: 240 ERYI-GVSGVLLKSDLYLTLGISGQIQHMVGGNGAKVIVAINKDKNAPIFNYADYGLVGD 298

Query: 97  LFKAVPELTEKL 108
           ++K VP L  +L
Sbjct: 299 IYKVVPALISQL 310

Length = 312

>gnl|CDD|189709 pfam00766, ETF_alpha, Electron transfer flavoprotein FAD-binding domain

 Score = 58.3 bits (142), Expect = 9e-13
 Identities = 21/23 (91%), Positives = 22/23 (95%)

Query: 50 PELYIAVGISGAIQHLAGMKDSK 72
          P+LYIAVGISGAIQHLAGMKDS 
Sbjct: 64 PKLYIAVGISGAIQHLAGMKDSD 86

This domain found at the C-terminus of electron transfer flavoprotein alpha chain and binds to FAD. The fold consists of a five-stranded parallel beta sheet as the core of the domain, flanked by alternating helices. A small part of this domain is donated by the beta chain. Length = 86

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	108
COG2025	313	FixB Electron transfer flavoprotein, alpha subunit	100.0
KOG3954|consensus	336		100.0
PRK03363	313	fixB putative electron transfer flavoprotein FixB;	100.0
PRK11916	312	electron transfer flavoprotein subunit YdiR; Provi	100.0
PLN00022	356	electron transfer flavoprotein subunit alpha; Prov	100.0
PF00766	86	ETF_alpha: Electron transfer flavoprotein FAD-bind	99.87
cd01408	235	SIRT1 SIRT1: Eukaryotic group (class1) which inclu	95.91
PTZ00408	242	NAD-dependent deacetylase; Provisional	95.44
PRK14138	244	NAD-dependent deacetylase; Provisional	95.43
PRK00481	242	NAD-dependent deacetylase; Provisional	95.42
cd01412	224	SIRT5_Af1_CobB SIRT5_Af1_CobB: Eukaryotic, archaea	93.58
PRK05333	285	NAD-dependent deacetylase; Provisional	93.04
PF00205	137	TPP_enzyme_M: Thiamine pyrophosphate enzyme, centr	90.76
PRK06466	574	acetolactate synthase 3 catalytic subunit; Validat	90.46
TIGR00118	558	acolac_lg acetolactate synthase, large subunit, bi	89.45
PRK06546	578	pyruvate dehydrogenase; Provisional	89.35
COG0846	250	SIR2 NAD-dependent protein deacetylases, SIR2 fami	89.05
PRK08978	548	acetolactate synthase 2 catalytic subunit; Reviewe	87.79
PRK07418	616	acetolactate synthase 3 catalytic subunit; Reviewe	87.07
PRK07524	535	hypothetical protein; Provisional	87.01
PRK07282	566	acetolactate synthase catalytic subunit; Reviewed	86.86
TIGR00173	432	menD 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohex	86.79
PTZ00409	271	Sir2 (Silent Information Regulator) protein; Provi	86.79
TIGR01504	588	glyox_carbo_lig glyoxylate carboligase. Glyoxylate	86.54
PRK07789	612	acetolactate synthase 1 catalytic subunit; Validat	86.39
PRK08322	547	acetolactate synthase; Reviewed	85.94
PRK06112	578	acetolactate synthase catalytic subunit; Validated	85.55
PRK07979	574	acetolactate synthase 3 catalytic subunit; Validat	84.97
CHL00099	585	ilvB acetohydroxyacid synthase large subunit	84.2
PRK08527	563	acetolactate synthase 3 catalytic subunit; Validat	82.35
PRK06725	570	acetolactate synthase 3 catalytic subunit; Validat	81.96
cd01409	260	SIRT4 SIRT4: Eukaryotic and prokaryotic group (cla	81.38
PRK08327	569	acetolactate synthase catalytic subunit; Validated	80.82
PRK08266	542	hypothetical protein; Provisional	80.82
PRK06154	565	hypothetical protein; Provisional	80.75

>COG2025 FixB Electron transfer flavoprotein, alpha subunit [Energy production and conversion]

Probab=100.00  E-value=2.2e-46  Score=305.14  Aligned_cols=104  Identities=49%  Similarity=0.691  Sum_probs=95.1

Q ss_pred             ceeecCCccccccccccccccccchhhhhhc-----------cccceeeeccCeeeCcceEEeeccchhhHhhhccCCCC
Q psy15576          4 WLRNSNHKVLQITQTYNSFSQPHYPKLLTVQ-----------IAETYISALKASQLIPELYIAVGISGAIQHLAGMKDSK   72 (108)
Q Consensus         4 ~~~~s~~r~~~~~~~~~~~~~pva~kL~a~~-----------i~~~~igg~SGktV~P~lYia~GISGA~QH~~Gm~~s~   72 (108)
                      +.=+|||||+++.|||+. +.|+||+||+..           ++++++.|+|||+|+|+||||||||||+||++||++||
T Consensus       196 ~iVVsgGRG~gs~enf~~-i~~LA~~LGa~VGaSRp~vd~gw~p~d~QVGqTGk~V~P~LYIA~GISGAiQHlaGm~~Sk  274 (313)
T COG2025         196 KIVVSGGRGLGSKENFKL-LEELADVLGAAVGASRPAVDAGWMPNDRQVGQTGKTVAPKLYIALGISGAIQHLAGMKDSK  274 (313)
T ss_pred             eEEEEcCcccCChhhhHH-HHHHHHHhCceeeccHHHHhcCCCCccceecCCCcEecccEEEEEecccHHHHHhhcccCc
Confidence            345899999999999966 799999999982           44444455999999999999999999999999999999


Q ss_pred             eEEEecCCCCCCcccccCeeEeeeHHHHHHHHHhhC
Q psy15576         73 TIVAINKDPEAPIFQVSDYGLVADLFKAVPELTEKL  108 (108)
Q Consensus        73 ~IIAIN~Dp~ApIf~~ADygiVgD~~evlp~Li~~l  108 (108)
                      +|||||+|||||||++||||||||+++++|+|+++|
T Consensus       275 ~IVAINkD~nAPIF~~ADyGiVgDl~~ivP~Lie~l  310 (313)
T COG2025         275 VIVAINKDPNAPIFQVADYGIVGDLFKIVPALIEAL  310 (313)
T ss_pred             EEEEEcCCCCCCccccCCeeeeeeHHHHHHHHHHHH
Confidence            999999999999999999999999999999999975

>KOG3954|consensus

Probab=100.00  E-value=2.6e-44  Score=293.13  Aligned_cols=102  Identities=57%  Similarity=0.784  Sum_probs=98.3

Q ss_pred             eecCCccccccccccccccccchhhhhhc-----------cccceeeeccCeeeCcceEEeeccchhhHhhhccCCCCeE
Q psy15576          6 RNSNHKVLQITQTYNSFSQPHYPKLLTVQ-----------IAETYISALKASQLIPELYIAVGISGAIQHLAGMKDSKTI   74 (108)
Q Consensus         6 ~~s~~r~~~~~~~~~~~~~pva~kL~a~~-----------i~~~~igg~SGktV~P~lYia~GISGA~QH~~Gm~~s~~I   74 (108)
                      -+||||+|.++|||| +++|+||||||+.           ++++++.|+|||.|+|+||||+|||||+||++||++||+|
T Consensus       221 VVsGGR~LKs~enFk-ll~~LAdklgaavGAtRaaVDaGyvpNdlQiGQTGKIVAPeLYiAvGisGAIQHLAGmKDSKvI  299 (336)
T KOG3954|consen  221 VVSGGRGLKSGENFK-LLYDLADKLGAAVGATRAAVDAGYVPNDLQIGQTGKIVAPELYIAVGISGAIQHLAGMKDSKVI  299 (336)
T ss_pred             EEECCcccCCcccce-ehHHHHHHhchhhchhhhhhccCcCCCccccccccceeccceEEEEeccHHHHHhhcCccceEE
Confidence            379999999999996 9999999999982           8999999999999999999999999999999999999999


Q ss_pred             EEecCCCCCCcccccCeeEeeeHHHHHHHHHhhC
Q psy15576         75 VAINKDPEAPIFQVSDYGLVADLFKAVPELTEKL  108 (108)
Q Consensus        75 IAIN~Dp~ApIf~~ADygiVgD~~evlp~Li~~l  108 (108)
                      ||||+|||||||++||||+|||+++++|||+|+|
T Consensus       300 vAINkDpdAPIFqvAD~GlvgDLfkiVPELtekL  333 (336)
T KOG3954|consen  300 VAINKDPDAPIFQVADYGLVGDLFKIVPELTEKL  333 (336)
T ss_pred             EEecCCCCCCceeeecccchhhHHHHhHHHHHhc
Confidence            9999999999999999999999999999999986

>PRK03363 fixB putative electron transfer flavoprotein FixB; Provisional

Probab=100.00  E-value=3.9e-44  Score=290.64  Aligned_cols=101  Identities=41%  Similarity=0.602  Sum_probs=93.3

Q ss_pred             eecCCccccccccccccccccchhhhhhc-------------cccceeeeccCeeeCcceEEeeccchhhHhhhccCCCC
Q psy15576          6 RNSNHKVLQITQTYNSFSQPHYPKLLTVQ-------------IAETYISALKASQLIPELYIAVGISGAIQHLAGMKDSK   72 (108)
Q Consensus         6 ~~s~~r~~~~~~~~~~~~~pva~kL~a~~-------------i~~~~igg~SGktV~P~lYia~GISGA~QH~~Gm~~s~   72 (108)
                      =+|+||||++-||| ++.+.+|+.||++-             +.+++|| +|||+|+|+||||||||||+||++||++|+
T Consensus       198 VVsgGRG~~~~E~~-~l~eeLA~~LGaavg~SRp~vd~~gW~p~~~QIG-qTGk~V~P~lYiA~GISGaiQH~~Gm~~s~  275 (313)
T PRK03363        198 VVSVGRGIGSKENI-ALAEQLCKAIGAELACSRPVAENEKWMEHERYVG-ISNLMLKPELYLAVGISGQIQHMVGANASQ  275 (313)
T ss_pred             EEEcCCCCCCHHHH-HHHHHHHHHhCCeEEecHHHHccCCCCCHHheec-CCCCCcCccEEEEEccccHHHHHhhcccCC
Confidence            37999999999999 67799999999872             3456666 999999999999999999999999999999


Q ss_pred             eEEEecCCCCCCcccccCeeEeeeHHHHHHHHHhhC
Q psy15576         73 TIVAINKDPEAPIFQVSDYGLVADLFKAVPELTEKL  108 (108)
Q Consensus        73 ~IIAIN~Dp~ApIf~~ADygiVgD~~evlp~Li~~l  108 (108)
                      +|||||+||+||||++||||||||++||||+|++++
T Consensus       276 ~IVAIN~Dp~APIF~~ADygiVgD~~eilP~L~e~l  311 (313)
T PRK03363        276 TIFAINKDKNAPIFQYADYGIVGDAVKILPALTAAL  311 (313)
T ss_pred             EEEEEcCCCCCCchhhCCeeEeeeHHHHHHHHHHHh
Confidence            999999999999999999999999999999999875

>PRK11916 electron transfer flavoprotein subunit YdiR; Provisional

Probab=100.00  E-value=5.5e-43  Score=283.84  Aligned_cols=101  Identities=39%  Similarity=0.587  Sum_probs=93.4

Q ss_pred             eecCCccccccccccccccccchhhhhhc-------------cccceeeeccCeeeCcceEEeeccchhhHhhhccCCCC
Q psy15576          6 RNSNHKVLQITQTYNSFSQPHYPKLLTVQ-------------IAETYISALKASQLIPELYIAVGISGAIQHLAGMKDSK   72 (108)
Q Consensus         6 ~~s~~r~~~~~~~~~~~~~pva~kL~a~~-------------i~~~~igg~SGktV~P~lYia~GISGA~QH~~Gm~~s~   72 (108)
                      =+|+|||+++.||| ++++.+|+.||+..             ..+++|| +|||+|+|+||||||||||+||++||++|+
T Consensus       197 VV~~GrG~~~~e~~-~~~~~LA~~LGaavG~SRp~vd~~gW~p~~~QIG-qTGk~V~P~lYiA~GISGAiQH~aGm~~s~  274 (312)
T PRK11916        197 VVGVGRGLAAQDDL-KMVHELAAVLNAEVGCSRPIAEGENWMERERYIG-VSGVLLKSDLYLTLGISGQIQHMVGGNGAK  274 (312)
T ss_pred             EEECCCCCCChHHH-HHHHHHHHHhCCEEEecHHHHccCCCCChhcEEC-CCCCCcCccEEEEeccccHHHHHhhcccCC
Confidence            37999999999999 66799999999872             4456666 999999999999999999999999999999


Q ss_pred             eEEEecCCCCCCcccccCeeEeeeHHHHHHHHHhhC
Q psy15576         73 TIVAINKDPEAPIFQVSDYGLVADLFKAVPELTEKL  108 (108)
Q Consensus        73 ~IIAIN~Dp~ApIf~~ADygiVgD~~evlp~Li~~l  108 (108)
                      +|||||+||+||||++||||||+|++||+|+|+++|
T Consensus       275 ~IVAIN~Dp~APIF~~ADygiVgD~~~vlP~L~e~l  310 (312)
T PRK11916        275 VIVAINKDKNAPIFNYADYGLVGDIYKVVPALISQL  310 (312)
T ss_pred             EEEEECCCCCCCchhhCCeeEeeeHHHHHHHHHHHh
Confidence            999999999999999999999999999999999875

>PLN00022 electron transfer flavoprotein subunit alpha; Provisional

Probab=100.00  E-value=4.7e-43  Score=288.68  Aligned_cols=101  Identities=55%  Similarity=0.769  Sum_probs=93.9

Q ss_pred             eecCCccccccccccccccccchhhhhhc------------cccceeeeccCeeeCcceEEeeccchhhHhhhccCCCCe
Q psy15576          6 RNSNHKVLQITQTYNSFSQPHYPKLLTVQ------------IAETYISALKASQLIPELYIAVGISGAIQHLAGMKDSKT   73 (108)
Q Consensus         6 ~~s~~r~~~~~~~~~~~~~pva~kL~a~~------------i~~~~igg~SGktV~P~lYia~GISGA~QH~~Gm~~s~~   73 (108)
                      =+|+||||++.||| ++.+.+|+.||+..            ..+++|| +||++|+|+||||||||||+||++||++|++
T Consensus       240 VVsgGRGv~~~en~-~l~eeLA~~LGaavGaSRp~vD~GW~p~~~QIG-qTGk~V~P~lYIA~GISGAiQH~~Gm~~s~~  317 (356)
T PLN00022        240 VVTGGRGLKSAENF-KMLEKLADKLGGAVGASRAAVDAGFVPNDLQVG-QTGKIVAPELYIAVGISGAIQHLAGMKDSKV  317 (356)
T ss_pred             EEECCCccCCHHHH-HHHHHHHHHhCCceeccHHHHhCCCCChHheec-cCCCCcCCcEEEEEecchHHHHHhhcccCCE
Confidence            37999999999999 67799999999872            5566666 9999999999999999999999999999999


Q ss_pred             EEEecCCCCCCcccccCeeEeeeHHHHHHHHHhhC
Q psy15576         74 IVAINKDPEAPIFQVSDYGLVADLFKAVPELTEKL  108 (108)
Q Consensus        74 IIAIN~Dp~ApIf~~ADygiVgD~~evlp~Li~~l  108 (108)
                      |||||+|||||||++||||||||++||+|+|+++|
T Consensus       318 IVAIN~D~~APIF~~ADygIVgD~~evlP~Lie~l  352 (356)
T PLN00022        318 IVAINKDADAPIFQVADYGLVADLFEAVPELLEKL  352 (356)
T ss_pred             EEEECCCCCCCchhhcCeeEeeeHHHHHHHHHHHH
Confidence            99999999999999999999999999999999874

>PF00766 ETF_alpha: Electron transfer flavoprotein FAD-binding domain; InterPro: IPR014731 Electron transfer flavoproteins (ETFs) serve as specific electron acceptors for primary dehydrogenases, transferring the electrons to terminal respiratory systems

Probab=99.87  E-value=3.4e-23  Score=143.31  Aligned_cols=65  Identities=35%  Similarity=0.465  Sum_probs=46.6

Q ss_pred             eecCCccccccccccccccccchhhhhhc------------cccceeeeccCeeeCcceEEeeccchhhHhhhccCCCC
Q psy15576          6 RNSNHKVLQITQTYNSFSQPHYPKLLTVQ------------IAETYISALKASQLIPELYIAVGISGAIQHLAGMKDSK   72 (108)
Q Consensus         6 ~~s~~r~~~~~~~~~~~~~pva~kL~a~~------------i~~~~igg~SGktV~P~lYia~GISGA~QH~~Gm~~s~   72 (108)
                      =+++|||+.+.|+| ++++=+|++|||..            ..+++|| +||++|+|+||||||||||+||++||++||
T Consensus        10 VV~~GrG~~~~e~~-~l~~~LA~~lga~vg~SRp~vd~gw~p~~~qIG-~sG~~v~P~lyia~GISGa~qH~~Gi~~s~   86 (86)
T PF00766_consen   10 VVAGGRGVGSKENF-ELIEELAEALGAAVGASRPVVDAGWIPRERQIG-QSGKTVAPKLYIAFGISGAIQHLAGIKDSK   86 (86)
T ss_dssp             EEEE-GGG-STGGC-HHHHHHHHHHT-EEEE-HHHHHTTSS-GGGBBS-TTSB--T-SEEEEES----HHHHTTTTT-S
T ss_pred             EEEcCCCCCCHHHH-HHHHHHHHHhCCchhccHHHHhCCCCchhhhcC-CCCcEEeeeeeEeecchhhHHHHhhhhcCC
Confidence            37899999999999 56688888888872            6677777 999999999999999999999999999986

They can be functionally classified into constitutive, "housekeeping" ETFs, mainly involved in the oxidation of fatty acids (Group I), and ETFs produced by some prokaryotes under specific growth conditions, receiving electrons only from the oxidation of specific substrates (Group II) []. ETFs are heterodimeric proteins composed of an alpha and beta subunit, and contain an FAD cofactor and AMP [, , , , ]. ETF consists of three domains: domains I and II are formed by the N- and C-terminal portions of the alpha subunit, respectively, while domain III is formed by the beta subunit. Domains I and III share an almost identical alpha-beta-alpha sandwich fold, while domain II forms an alpha-beta-alpha sandwich similar to that of bacterial flavodoxins. FAD is bound in a cleft between domains II and III, while domain III binds the AMP molecule. Interactions between domains I and III stabilise the protein, forming a shallow bowl where domain II resides. This entry represents the C-terminal domain of the alpha subunit of both Group I and Group II ETFs.; PDB: 1O96_D 3CLR_D 1O97_D 3CLT_D 3CLU_D 3CLS_D 2A1U_A 2A1T_R 1EFV_A 1EFP_C ....

>cd01408 SIRT1 SIRT1: Eukaryotic group (class1) which includes human sirtuins SIRT1-3 and yeast Hst1-4; and are members of the SIR2 family of proteins, silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone deacetylation

Probab=95.91  E-value=0.012  Score=45.91  Aligned_cols=56  Identities=27%  Similarity=0.344  Sum_probs=42.5

Q ss_pred             CcceEEeeccchhhHhhhcc----CCCCeEEEecCCCCCCc-ccccCeeEeeeHHHHHHHH
Q psy15576         49 IPELYIAVGISGAIQHLAGM----KDSKTIVAINKDPEAPI-FQVSDYGLVADLFKAVPEL  104 (108)
Q Consensus        49 ~P~lYia~GISGA~QH~~Gm----~~s~~IIAIN~Dp~ApI-f~~ADygiVgD~~evlp~L  104 (108)
                      +.++.|.+|-|+++.-.+++    +.-..+|.||.+|...- -+.+|+.+-+|+.|++|+|
T Consensus       175 ~aDlllvvGTSl~V~pa~~l~~~~~~~~~~v~iN~~~~~~~~~~~~d~~~~~~~~~~l~~~  235 (235)
T cd01408         175 EADLLIVIGTSLKVAPFASLPSRVPSEVPRVLINREPVGHLGKRPFDVALLGDCDDGVREL  235 (235)
T ss_pred             cCCEEEEECCCCeeccHHHHHHHHhCCCcEEEEeCCCCCCCCCCCcCEEEeCCHHHHHHhC
Confidence            47999999999988744432    22245777999986543 1678999999999999986

Sir2 proteins have been shown to regulate gene silencing, DNA repair, and life span. The most-studied function, gene silencing, involves the inactivation of chromosome domains containing key regulatory genes by packaging them into a specialized chromatin structure that is inaccessible to DNA-binding proteins. The nuclear SIRT1 has been shown to target the p53 tumor suppressor protein for deacetylation to suppress DNA damage, and the cytoplasmic SIRT2 homolog has been shown to target alpha-tubulin for deacetylation for the maintenance of cell integrity.

>PTZ00408 NAD-dependent deacetylase; Provisional

Probab=95.44  E-value=0.029  Score=44.30  Aligned_cols=59  Identities=22%  Similarity=0.335  Sum_probs=45.8

Q ss_pred             CcceEEeeccchhhHhhhccC-----CCCeEEEecCCCCCCcccccCeeEeeeHHHHHHHHHhhC
Q psy15576         49 IPELYIAVGISGAIQHLAGMK-----DSKTIVAINKDPEAPIFQVSDYGLVADLFKAVPELTEKL  108 (108)
Q Consensus        49 ~P~lYia~GISGA~QH~~Gm~-----~s~~IIAIN~Dp~ApIf~~ADygiVgD~~evlp~Li~~l  108 (108)
                      +.+|.|.+|-|.++.=.+.+-     .-..||.||.+|...- ..+|+.+.+++.++||+|.+++
T Consensus       172 ~~DlllviGTSl~V~pa~~l~~~a~~~g~~vi~IN~~~~~~~-~~~~~~i~g~~~~~l~~l~~~~  235 (242)
T PTZ00408        172 KTDLFVAVGTSGNVYPAAGFVGRAQFYGATTLELNLEEGTNY-SQFDESIYGKASVIVPAWVDRV  235 (242)
T ss_pred             hCCEEEEEccCCccccHHHHHHHHHHcCCeEEEECCCCCCCC-ccCCEEEECCHHHHHHHHHHHH
Confidence            468999999999887555432     2236889999986655 4579999999999999998753

>PRK14138 NAD-dependent deacetylase; Provisional

Probab=95.43  E-value=0.032  Score=43.78  Aligned_cols=59  Identities=15%  Similarity=0.209  Sum_probs=45.5

Q ss_pred             CcceEEeeccchhhHhhhcc-----CCCCeEEEecCCCCCCcccccCeeEeeeHHHHHHHHHhhC
Q psy15576         49 IPELYIAVGISGAIQHLAGM-----KDSKTIVAINKDPEAPIFQVSDYGLVADLFKAVPELTEKL  108 (108)
Q Consensus        49 ~P~lYia~GISGA~QH~~Gm-----~~s~~IIAIN~Dp~ApIf~~ADygiVgD~~evlp~Li~~l  108 (108)
                      +.++.|.+|-|.++.=...+     +....||.||.+|. ++=+.||+.+.+|+.|++|+|++.+
T Consensus       178 ~aDl~lviGTSl~V~pa~~l~~~~~~~g~~~i~iN~~~t-~~d~~~~~~i~~~~~~~l~~l~~~~  241 (244)
T PRK14138        178 KASLMIVMGSSLVVYPAAELPLITVRSGGKLVIVNLGET-PLDDIATLKYNMDVVEFANRVMSEG  241 (244)
T ss_pred             cCCEEEEeCcCCeeecHhHHHHHHHHcCCeEEEEcCCCC-CCCcceeEEEeCCHHHHHHHHHHHh
Confidence            45889999999887655543     23346889999855 4456789999999999999998753

>PRK00481 NAD-dependent deacetylase; Provisional

Probab=95.42  E-value=0.031  Score=43.33  Aligned_cols=58  Identities=31%  Similarity=0.480  Sum_probs=44.4

Q ss_pred             cceEEeeccchhhHhhhccC-----CCCeEEEecCCCCCCcccccCeeEeeeHHHHHHHHHhhC
Q psy15576         50 PELYIAVGISGAIQHLAGMK-----DSKTIVAINKDPEAPIFQVSDYGLVADLFKAVPELTEKL  108 (108)
Q Consensus        50 P~lYia~GISGA~QH~~Gm~-----~s~~IIAIN~Dp~ApIf~~ADygiVgD~~evlp~Li~~l  108 (108)
                      .++.|.+|-|.++.-...+-     .-..+|.||.+|. ++-..+|+.+-+|+.|+||+|.++|
T Consensus       178 ~dl~lviGTsl~V~p~~~l~~~~~~~~~~~i~iN~~~~-~~~~~~~~~i~~~~~~~l~~l~~~~  240 (242)
T PRK00481        178 ADLFIVIGTSLVVYPAAGLPYEAREHGAKTVEINLEPT-PLDSLFDLVIHGKAGEVVPELVEEL  240 (242)
T ss_pred             CCEEEEECCCceEcCHhHHHHHHHHCCCeEEEECCCCC-CCCCccCEEEECCHHHHHHHHHHHh
Confidence            48999999998874333322     2335999999985 5555689999999999999998764

>cd01412 SIRT5_Af1_CobB SIRT5_Af1_CobB: Eukaryotic, archaeal and prokaryotic group (class3) which includes human sirtuin SIRT5, Archaeoglobus fulgidus Sir2-Af1, and E

Probab=93.58  E-value=0.18  Score=38.45  Aligned_cols=56  Identities=23%  Similarity=0.572  Sum_probs=42.1

Q ss_pred             CcceEEeeccchhhHhhhcc-----CCCCeEEEecCCCCCCcccccCeeEeeeHHHHHHHHH
Q psy15576         49 IPELYIAVGISGAIQHLAGM-----KDSKTIVAINKDPEAPIFQVSDYGLVADLFKAVPELT  105 (108)
Q Consensus        49 ~P~lYia~GISGA~QH~~Gm-----~~s~~IIAIN~Dp~ApIf~~ADygiVgD~~evlp~Li  105 (108)
                      +.++.|-+|-|+.++=..-+     +.-..+|.||.+|. ++-+.+|+.+-+|+.|+||+|+
T Consensus       164 ~~dl~lvlGTsl~v~p~~~l~~~~~~~~~~~i~iN~~~~-~~~~~~~~~i~g~~~~~l~~l~  224 (224)
T cd01412         164 KADLFLVIGTSGVVYPAAGLPEEAKERGARVIEINPEPT-PLSPIADFAFRGKAGEVLPALL  224 (224)
T ss_pred             cCCEEEEECcCccchhHHHHHHHHHHCCCeEEEECCCCC-CCCCcCCEEEECCHHHHHHHhC
Confidence            67899999999876522221     12236888999976 4448899999999999999874

coli CobB; and are members of the SIR2 family of proteins, silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone deacetylation. Sir2 proteins have been shown to regulate gene silencing, DNA repair, metabolic enzymes, and life span. CobB is a bacterial sirtuin that deacetylates acetyl-CoA synthetase at an active site lysine to stimulate its enzymatic activity.

>PRK05333 NAD-dependent deacetylase; Provisional

Probab=93.04  E-value=0.23  Score=39.69  Aligned_cols=57  Identities=19%  Similarity=0.188  Sum_probs=43.4

Q ss_pred             cceEEeeccchhhHh------hhccCCCCeEEEecCCCCCCcccccCeeEeeeHHHHHHHHHhhC
Q psy15576         50 PELYIAVGISGAIQH------LAGMKDSKTIVAINKDPEAPIFQVSDYGLVADLFKAVPELTEKL  108 (108)
Q Consensus        50 P~lYia~GISGA~QH------~~Gm~~s~~IIAIN~Dp~ApIf~~ADygiVgD~~evlp~Li~~l  108 (108)
                      -++.|.+|-|..+.=      ++--+++ .+|.||.+| .+.=+.+|+.+-+|+.|+||.|.+.|
T Consensus       215 ~DlllvvGTSl~V~p~~~~~~~a~~~g~-~~i~IN~~~-t~~~~~~~~~i~g~~~evL~~l~~~l  277 (285)
T PRK05333        215 ADAVLVVGSSLMVYSGYRFCVWAAQQGK-PIAALNLGR-TRADPLLTLKVEASCAQALAALVARL  277 (285)
T ss_pred             CCEEEEECcCceecchhhhHHHHHHCCC-eEEEECCCC-CCCCcceeEEEeCCHHHHHHHHHHHh
Confidence            578888999998751      1222334 899999985 45656679999999999999998764

>PF00205 TPP_enzyme_M: Thiamine pyrophosphate enzyme, central domain; InterPro: IPR012000 A number of enzymes require thiamine pyrophosphate (TPP) (vitamin B1) as a cofactor

Probab=90.76  E-value=0.6  Score=32.37  Aligned_cols=55  Identities=22%  Similarity=0.293  Sum_probs=39.4

Q ss_pred             cceEEeeccchhhHhhhc----cCCCCeEEEecCCCCCCcccc-cCeeEeeeHHHHHHHH
Q psy15576         50 PELYIAVGISGAIQHLAG----MKDSKTIVAINKDPEAPIFQV-SDYGLVADLFKAVPEL  104 (108)
Q Consensus        50 P~lYia~GISGA~QH~~G----m~~s~~IIAIN~Dp~ApIf~~-ADygiVgD~~evlp~L  104 (108)
                      .++.|++|.+=....+.|    ....+.+|-||.||..-=-.. .|+.+++|+.++|.+|
T Consensus        78 aDlvl~iG~~~~~~~~~~~~~~~~~~~~~I~I~~d~~~~~~~~~~~~~i~~d~~~~l~~L  137 (137)
T PF00205_consen   78 ADLVLAIGTRLSDFNTYGFSPAFNPDAKIIQIDPDPAEIGKNYPPDVAIVGDIKAFLRAL  137 (137)
T ss_dssp             SSEEEEESSSSSTTTTTTTTGCSTTTSEEEEEESSGGGTTSSSEESEEEESHHHHHHHHH
T ss_pred             CCEEEEECCCCccccccccccccCCCCEEEEEECCHHHhCCCCCCCEEEEECHHHHhhCC
Confidence            478999996633323333    222238999999997665444 8999999999999886

It has been shown [] that some of these enzymes are structurally related. This central domain of TPP enzymes contains a 2-fold Rossman fold. ; GO: 0000287 magnesium ion binding, 0030976 thiamine pyrophosphate binding; PDB: 1OZH_C 1OZF_B 1OZG_B 2Q29_B 2Q28_A 2Q27_B 1OVM_B 1PVD_A 1PYD_B 2VK1_C ....

>PRK06466 acetolactate synthase 3 catalytic subunit; Validated

Probab=90.46  E-value=0.24  Score=42.48  Aligned_cols=59  Identities=19%  Similarity=0.206  Sum_probs=34.4

Q ss_pred             CcceEEeeccchhhHhhhc---cCCCCeEEEecCCCCCCc-ccccCeeEeeeHHHHHHHHHhh
Q psy15576         49 IPELYIAVGISGAIQHLAG---MKDSKTIVAINKDPEAPI-FQVSDYGLVADLFKAVPELTEK  107 (108)
Q Consensus        49 ~P~lYia~GISGA~QH~~G---m~~s~~IIAIN~Dp~ApI-f~~ADygiVgD~~evlp~Li~~  107 (108)
                      ..++.|++|-+=....+.+   ......+|-||.||..-= ...+|..+++|+.++|++|+++
T Consensus       272 ~aD~il~vG~~~~~~~~~~~~~~~~~~~vi~id~d~~~i~~~~~~~~~i~~D~~~~l~~L~~~  334 (574)
T PRK06466        272 HADVILAVGARFDDRVTNGPAKFCPNAKIIHIDIDPASISKTIKADIPIVGPVESVLTEMLAI  334 (574)
T ss_pred             hCCEEEEECCCCCccccCchhhcCCCCeEEEEECCHHHhCCccCCCeEEecCHHHHHHHHHHH
Confidence            3467777775422111111   112234666777765311 1136999999999999998764

>TIGR00118 acolac_lg acetolactate synthase, large subunit, biosynthetic type

Probab=89.45  E-value=0.43  Score=40.61  Aligned_cols=97  Identities=19%  Similarity=0.111  Sum_probs=54.3

Q ss_pred             Cccccccccccccccccchhhhhhc---------ccc---ceeeeccCee---------eCcceEEeeccchhhHhhhc-
Q psy15576         10 HKVLQITQTYNSFSQPHYPKLLTVQ---------IAE---TYISALKASQ---------LIPELYIAVGISGAIQHLAG-   67 (108)
Q Consensus        10 ~r~~~~~~~~~~~~~pva~kL~a~~---------i~~---~~igg~SGkt---------V~P~lYia~GISGA~QH~~G-   67 (108)
                      |.+....+-+ +.++-+|++|++..         ++|   .|+| +.|..         -.+++.|++|-+=.-..+.+ 
T Consensus       209 G~g~~~~~a~-~~l~~lae~l~~pv~tt~~~kg~~~e~hp~~~G-~~g~~~~~~~~~~l~~aD~vl~lG~~~~~~~~~~~  286 (558)
T TIGR00118       209 GGGVIIAGAS-EELKELAERIQIPVTTTLMGLGSFPEDHPLSLG-MLGMHGTKTANLAVHECDLIIAVGARFDDRVTGNL  286 (558)
T ss_pred             CCCccccchH-HHHHHHHHHhCCCEEEccccCCCCCCCCccccC-CCCCCCCHHHHHHHHhCCEEEEECCCCCccccCch
Confidence            3344444445 33477888888752         332   2444 22321         23678888885422221111 


Q ss_pred             --cCCCCeEEEecCCCCCCcc-cccCeeEeeeHHHHHHHHHhhC
Q psy15576         68 --MKDSKTIVAINKDPEAPIF-QVSDYGLVADLFKAVPELTEKL  108 (108)
Q Consensus        68 --m~~s~~IIAIN~Dp~ApIf-~~ADygiVgD~~evlp~Li~~l  108 (108)
                        ...-..+|-||.|+...=. ...|..+++|+.++|+.|++.+
T Consensus       287 ~~~~~~~~~i~id~d~~~~~~~~~~~~~i~~d~~~~l~~L~~~l  330 (558)
T TIGR00118       287 AKFAPNAKIIHIDIDPAEIGKNVRVDIPIVGDARNVLEELLKKL  330 (558)
T ss_pred             hhcCCCCcEEEEeCCHHHhCCcCCCCeEEecCHHHHHHHHHHhh
Confidence              1112347777887743111 1358999999999999998753

Several isozymes of this enzyme are found in E. coli K12, one of which contains a frameshift in the large subunit gene and is not expressed.

>PRK06546 pyruvate dehydrogenase; Provisional

Probab=89.35  E-value=0.42  Score=41.27  Aligned_cols=36  Identities=17%  Similarity=0.187  Sum_probs=25.1

Q ss_pred             eEEEecCCCCCCcc-cccCeeEeeeHHHHHHHHHhhC
Q psy15576         73 TIVAINKDPEAPIF-QVSDYGLVADLFKAVPELTEKL  108 (108)
Q Consensus        73 ~IIAIN~Dp~ApIf-~~ADygiVgD~~evlp~Li~~l  108 (108)
                      .+|-||.|++.--- ...|+.|++|+..+|++|.+.|
T Consensus       286 ~~I~vd~d~~~~~~~~~~~~~i~~D~~~~l~~L~~~L  322 (578)
T PRK06546        286 RTAQVDIDPEHLGRRTRVDLAVHGDVAETIRALLPLV  322 (578)
T ss_pred             cEEEEeCCHHHhCCCCCCCeEEEcCHHHHHHHHHHhh
Confidence            35556666653211 1468999999999999998754

>COG0846 SIR2 NAD-dependent protein deacetylases, SIR2 family [Transcription]

Probab=89.05  E-value=0.22  Score=40.11  Aligned_cols=62  Identities=23%  Similarity=0.303  Sum_probs=49.1

Q ss_pred             eeeCcceEEeeccchhhHhhhccCC-----CCeEEEecCCCCCCcccccCeeEeeeHHHHHHHHHhhC
Q psy15576         46 SQLIPELYIAVGISGAIQHLAGMKD-----SKTIVAINKDPEAPIFQVSDYGLVADLFKAVPELTEKL  108 (108)
Q Consensus        46 ktV~P~lYia~GISGA~QH~~Gm~~-----s~~IIAIN~Dp~ApIf~~ADygiVgD~~evlp~Li~~l  108 (108)
                      ..=..++.|.+|-||.+.=.+++..     -..+|.||. +.-++-..+|+-+.+++.+++|.|.+.+
T Consensus       179 ~~~~~d~liviGTSl~V~Paa~~p~~~~~~g~~~i~iN~-~~~~~~~~~d~~i~~~a~~~~~~l~~~~  245 (250)
T COG0846         179 ALKEADLLIVIGTSLKVYPAAGLPELAKRRGAKVIEINL-EPTRLDPIADEVIRGDAGEVLPLLLEEL  245 (250)
T ss_pred             HhccCCEEEEECcceEEcChhhhhHHHHhcCCEEEEECC-CcccCcchhHHHHHhhHHHHHHHHHHHh
Confidence            3456789999999998765555432     236888999 6678889999999999999999998753

>PRK08978 acetolactate synthase 2 catalytic subunit; Reviewed

Probab=87.79  E-value=0.61  Score=39.61  Aligned_cols=59  Identities=20%  Similarity=0.251  Sum_probs=37.0

Q ss_pred             CcceEEeeccchhhHhhhc---cCCCCeEEEecCCCCCCc-ccccCeeEeeeHHHHHHHHHhh
Q psy15576         49 IPELYIAVGISGAIQHLAG---MKDSKTIVAINKDPEAPI-FQVSDYGLVADLFKAVPELTEK  107 (108)
Q Consensus        49 ~P~lYia~GISGA~QH~~G---m~~s~~IIAIN~Dp~ApI-f~~ADygiVgD~~evlp~Li~~  107 (108)
                      .+++.|++|-+=....+.+   ......+|-||.||+--= ....|+.+++|+.+++++|.+.
T Consensus       262 ~aD~vl~lG~~~~~~~~~~~~~~~~~~~~i~id~d~~~~~~~~~~~~~i~~d~~~~l~~l~~~  324 (548)
T PRK08978        262 ECDLLIAVGARFDDRVTGKLNTFAPHAKVIHLDIDPAEINKLRQAHVALQGDLNALLPALQQP  324 (548)
T ss_pred             hCCEEEEEcCCCCccccCCccccCCCCeEEEEECCHHHhCCCCCCCeEEecCHHHHHHHHHHh
Confidence            5778888886522222211   122235777888775210 1236999999999999998764

>PRK07418 acetolactate synthase 3 catalytic subunit; Reviewed

Probab=87.07  E-value=0.72  Score=40.06  Aligned_cols=60  Identities=23%  Similarity=0.230  Sum_probs=36.0

Q ss_pred             CcceEEeeccchhhHhh---hccCCCCeEEEecCCCCCCc-ccccCeeEeeeHHHHHHHHHhhC
Q psy15576         49 IPELYIAVGISGAIQHL---AGMKDSKTIVAINKDPEAPI-FQVSDYGLVADLFKAVPELTEKL  108 (108)
Q Consensus        49 ~P~lYia~GISGA~QH~---~Gm~~s~~IIAIN~Dp~ApI-f~~ADygiVgD~~evlp~Li~~l  108 (108)
                      ..+|.|++|-+=..-.+   ........+|-||.||.-.= ....|+.+++|+.++|++|++++
T Consensus       290 ~aDlvL~vG~~~~~~~~~~~~~~~~~~~~i~id~d~~~ig~~~~~~~~i~~D~~~~l~~L~~~l  353 (616)
T PRK07418        290 ECDLLIAVGARFDDRVTGKLDEFASRAKVIHIDIDPAEVGKNRRPDVPIVGDVRKVLVKLLERS  353 (616)
T ss_pred             hCCEEEEEcCCCCccccCChhhcCCCCeEEEEeCCHHHhCCccCCCeEEecCHHHHHHHHHHhh
Confidence            45777777754110000   01222334677787774211 11479999999999999998753

>PRK07524 hypothetical protein; Provisional

Probab=87.01  E-value=0.94  Score=38.37  Aligned_cols=60  Identities=23%  Similarity=0.323  Sum_probs=39.0

Q ss_pred             CcceEEeeccc-hhhH----hhhccCCCCeEEEecCCCCCCc-ccccCeeEeeeHHHHHHHHHhhC
Q psy15576         49 IPELYIAVGIS-GAIQ----HLAGMKDSKTIVAINKDPEAPI-FQVSDYGLVADLFKAVPELTEKL  108 (108)
Q Consensus        49 ~P~lYia~GIS-GA~Q----H~~Gm~~s~~IIAIN~Dp~ApI-f~~ADygiVgD~~evlp~Li~~l  108 (108)
                      ..+|.|++|-+ +-..    +.........+|-||.||+..- .-..|..|++|+.++|++|++.+
T Consensus       263 ~aDlvl~vG~~~~~~~~~~~~~~~~~~~~~~i~id~d~~~~~~~~~~~~~i~~D~~~~L~~L~~~l  328 (535)
T PRK07524        263 EADVVLAVGTELGETDYDVYFDGGFPLPGELIRIDIDPDQLARNYPPALALVGDARAALEALLARL  328 (535)
T ss_pred             hCCEEEEeCCCcCccccccccccccCCCCCEEEEECCHHHhCCCcCCCceEecCHHHHHHHHHHhc
Confidence            56888888855 1111    1112333345888888886422 11479999999999999998754

>PRK07282 acetolactate synthase catalytic subunit; Reviewed

Probab=86.86  E-value=0.43  Score=41.00  Aligned_cols=58  Identities=21%  Similarity=0.226  Sum_probs=33.3

Q ss_pred             cceEEeeccchhhHhhhc---cCCCCeEEEecCCCCCCcc--cccCeeEeeeHHHHHHHHHhhC
Q psy15576         50 PELYIAVGISGAIQHLAG---MKDSKTIVAINKDPEAPIF--QVSDYGLVADLFKAVPELTEKL  108 (108)
Q Consensus        50 P~lYia~GISGA~QH~~G---m~~s~~IIAIN~Dp~ApIf--~~ADygiVgD~~evlp~Li~~l  108 (108)
                      .++.|++|-+=.-..+.+   ......+|=||.||.- |=  -..|+.+++|+..+|++|++++
T Consensus       277 aD~vl~lG~~l~~~~~~~~~~~~~~~~~i~id~d~~~-i~~~~~~~~~i~~D~~~~L~~L~~~l  339 (566)
T PRK07282        277 ADFMINIGSRFDDRLTGNPKTFAKNAKVAHIDIDPAE-IGKIIKTDIPVVGDAKKALQMLLAEP  339 (566)
T ss_pred             CCEEEEECCCCCccccCChhhcCCCCeEEEEECCHHH-hCCCCCCCeEEecCHHHHHHHHHHhh
Confidence            367777775521111100   1112346667777642 11  1258999999999999998753

>TIGR00173 menD 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase

Probab=86.79  E-value=2.3  Score=35.32  Aligned_cols=61  Identities=16%  Similarity=0.093  Sum_probs=41.7

Q ss_pred             eeCcceEEeeccc-hhhHhhhcc-CCCCeEEEecCCCCCCc-ccccCeeEeeeHHHHHHHHHhh
Q psy15576         47 QLIPELYIAVGIS-GAIQHLAGM-KDSKTIVAINKDPEAPI-FQVSDYGLVADLFKAVPELTEK  107 (108)
Q Consensus        47 tV~P~lYia~GIS-GA~QH~~Gm-~~s~~IIAIN~Dp~ApI-f~~ADygiVgD~~evlp~Li~~  107 (108)
                      .+.++|.|++|-. +.......+ .....+|-|+.||...= +...|.+|++|+.+++.+|++.
T Consensus       272 ~~~aDlvl~lG~~~~~~~~~~~~~~~~~~~i~vd~d~~~~~~~~~~~~~i~~D~~~~l~~l~~~  335 (432)
T TIGR00173       272 ELQPDLVIRFGGPPVSKRLRQWLARQPAEYWVVDPDPGWLDPSHHATTRLEASPAEFAEALAGL  335 (432)
T ss_pred             hCCCCEEEEeCCCcchhHHHHHHhCCCCcEEEECCCCCccCCCCCceEEEEECHHHHHHHhhhc
Confidence            4479999999965 222222222 22346888998886421 2245999999999999998765

2-oxoglutarate decarboxylase/SHCHC synthase (menD) is a thiamine pyrophosphate enzyme involved in menaquinone biosynthesis.

>PTZ00409 Sir2 (Silent Information Regulator) protein; Provisional

Probab=86.79  E-value=1.4  Score=35.48  Aligned_cols=54  Identities=24%  Similarity=0.322  Sum_probs=41.8

Q ss_pred             CcceEEeeccchhhHhhhccC-----CCCeEEEecCCCCCCcc-cccCeeEeeeHHHHHHH
Q psy15576         49 IPELYIAVGISGAIQHLAGMK-----DSKTIVAINKDPEAPIF-QVSDYGLVADLFKAVPE  103 (108)
Q Consensus        49 ~P~lYia~GISGA~QH~~Gm~-----~s~~IIAIN~Dp~ApIf-~~ADygiVgD~~evlp~  103 (108)
                      +.++.|.+|-|+.++-.+++-     .-..||.||.+|. +.- ..||+.+.+++.|+++.
T Consensus       199 ~aDlllviGTSl~V~pa~~l~~~a~~~g~~vi~IN~~~t-~~~~~~~d~~i~~~~~~~~~~  258 (271)
T PTZ00409        199 KCDLLLVVGTSSSVSTATNLCYRAHRKKKKIVEVNISKT-YITNRISDYHVRAKFSELAQI  258 (271)
T ss_pred             cCCEEEEECCCCcccCHHHHHHHHHHcCCCEEEECCCCC-CCCCccccEEEECcHHHHHHH
Confidence            458899999999987666543     2345889999987 443 46899999999999963

>TIGR01504 glyox_carbo_lig glyoxylate carboligase

Probab=86.54  E-value=1.1  Score=38.98  Aligned_cols=96  Identities=17%  Similarity=0.136  Sum_probs=57.6

Q ss_pred             Cccccccccccccccccchhhhhhc---------cccc---eeeeccCee----------eCcceEEeeccchhhHhhhc
Q psy15576         10 HKVLQITQTYNSFSQPHYPKLLTVQ---------IAET---YISALKASQ----------LIPELYIAVGISGAIQHLAG   67 (108)
Q Consensus        10 ~r~~~~~~~~~~~~~pva~kL~a~~---------i~~~---~igg~SGkt----------V~P~lYia~GISGA~QH~~G   67 (108)
                      |.|..+.+-+++ +.-+|++|++-.         ++|+   ++| ..|-.          -..++.|++|.+=.-.++.+
T Consensus       210 G~g~~~~~a~~~-l~~lae~~g~PV~tt~~gkg~~p~~hpl~~G-~~g~~~~~~~a~~~l~~aD~iL~lG~~l~~~~t~~  287 (588)
T TIGR01504       210 GGGVINADAADL-LQEFAELTGVPVIPTLMGWGCIPDDHELMAG-MVGLQTSHRYGNATLLESDFVFGIGNRWANRHTGS  287 (588)
T ss_pred             CCCcchhhhHHH-HHHHHHHhCCCeEEcCccCCCCCCCChhhCc-CCCCCCCcHHHHHHHHhCCEEEEECCCCCccccCc
Confidence            445545554533 367788888752         3333   555 22311          12589999997632222222


Q ss_pred             ---cCCCCeEEEecCCCCCCccc-ccCeeEeeeHHHHHHHHHhh
Q psy15576         68 ---MKDSKTIVAINKDPEAPIFQ-VSDYGLVADLFKAVPELTEK  107 (108)
Q Consensus        68 ---m~~s~~IIAIN~Dp~ApIf~-~ADygiVgD~~evlp~Li~~  107 (108)
                         ......+|-||.|+..--.. ..|+.|++|+.++|++|++.
T Consensus       288 ~~~~~~~~~~I~id~d~~~i~~~~~~~~~i~~D~~~~L~~L~~~  331 (588)
T TIGR01504       288 VDVYTEGRKFVHVDIEPTQIGRVFAPDLGIVSDAKAALKLLVEV  331 (588)
T ss_pred             ccccCCCCeEEEeeCCHHHhcCcCCCCeEEEeCHHHHHHHHHHH
Confidence               22234477889888742211 37999999999999999874

Glyoxylate carboligase, also called tartronate-semialdehyde synthase, releases CO2 while synthesizing a single molecule of tartronate semialdehyde from two molecules of glyoxylate. It is a thiamine pyrophosphate-dependent enzyme, closely related in sequence to the large subunit of acetolactate synthase. In the D-glycerate pathway, part of allantoin degradation in the Enterobacteriaceae, tartronate semialdehyde is converted to D-glycerate and then 3-phosphoglycerate, a product of glycolysis and entry point in the general metabolism.

>PRK07789 acetolactate synthase 1 catalytic subunit; Validated

Probab=86.39  E-value=1.1  Score=38.92  Aligned_cols=60  Identities=20%  Similarity=0.236  Sum_probs=39.9

Q ss_pred             CcceEEeeccchhhHhhhc---cCCCCeEEEecCCCCCCc-ccccCeeEeeeHHHHHHHHHhhC
Q psy15576         49 IPELYIAVGISGAIQHLAG---MKDSKTIVAINKDPEAPI-FQVSDYGLVADLFKAVPELTEKL  108 (108)
Q Consensus        49 ~P~lYia~GISGA~QH~~G---m~~s~~IIAIN~Dp~ApI-f~~ADygiVgD~~evlp~Li~~l  108 (108)
                      .++|.|++|-+=....+.+   ......+|-||.|++..- ....|+.|++|+.+++++|++++
T Consensus       297 ~aDlvL~lG~~l~~~~t~~~~~~~~~~~~i~Id~d~~~i~~~~~~~~~i~gD~~~~l~~L~~~l  360 (612)
T PRK07789        297 RSDLLIALGARFDDRVTGKLDSFAPDAKVIHADIDPAEIGKNRHADVPIVGDVKEVIAELIAAL  360 (612)
T ss_pred             hCCEEEEECCCCCccccCChhhcCCCCcEEEEECCHHHhCCCCCCCeEEecCHHHHHHHHHHhh
Confidence            4899999996532222211   122334788999985321 12469999999999999998753

>PRK08322 acetolactate synthase; Reviewed

Probab=85.94  E-value=1.5  Score=37.14  Aligned_cols=60  Identities=23%  Similarity=0.226  Sum_probs=38.7

Q ss_pred             CcceEEeeccchhhHhhhcc--CCCCeEEEecCCCCCCc-ccccCeeEeeeHHHHHHHHHhhC
Q psy15576         49 IPELYIAVGISGAIQHLAGM--KDSKTIVAINKDPEAPI-FQVSDYGLVADLFKAVPELTEKL  108 (108)
Q Consensus        49 ~P~lYia~GISGA~QH~~Gm--~~s~~IIAIN~Dp~ApI-f~~ADygiVgD~~evlp~Li~~l  108 (108)
                      .++|.|++|-+=.-.-+.+.  .....+|-||.||+..= ...+|+.+++|+.+++++|++++
T Consensus       262 ~aDlil~lG~~l~~~~~~~~~~~~~~~~i~id~d~~~~~~~~~~~~~i~~D~~~~l~~L~~~l  324 (547)
T PRK08322        262 HADLIINVGHDVIEKPPFFMNPNGDKKVIHINFLPAEVDPVYFPQVEVVGDIANSLWQLKERL  324 (547)
T ss_pred             hCCEEEEECCCCccccccccCCCCCCeEEEEeCCHHHcCCCcCCCeEEecCHHHHHHHHHHhc
Confidence            56888888854221111111  22335888888887522 12479999999999999998753

>PRK06112 acetolactate synthase catalytic subunit; Validated

Probab=85.55  E-value=1.5  Score=37.65  Aligned_cols=59  Identities=17%  Similarity=0.154  Sum_probs=39.9

Q ss_pred             CcceEEeeccchhhHhhhcc---CCCCeEEEecCCCCCCcccccCeeEeeeHHHHHHHHHhh
Q psy15576         49 IPELYIAVGISGAIQHLAGM---KDSKTIVAINKDPEAPIFQVSDYGLVADLFKAVPELTEK  107 (108)
Q Consensus        49 ~P~lYia~GISGA~QH~~Gm---~~s~~IIAIN~Dp~ApIf~~ADygiVgD~~evlp~Li~~  107 (108)
                      .++|.|++|-.=.-..+.+.   ...+.+|-||.|+...--.+.++.+++|+.++|++|+++
T Consensus       284 ~aDlvl~lG~~~~~~~~~~~~~~~~~~~~i~id~d~~~~~~~~~~~~i~~D~~~~l~~L~~~  345 (578)
T PRK06112        284 EADVVLLVGTRTNQNGTDSWSLYPEQAQYIHIDVDGEEVGRNYEALRLVGDARLTLAALTDA  345 (578)
T ss_pred             hCCEEEEECCCCCccccccccccCCCCeEEEEECChHHhCccccceEEEeCHHHHHHHHHHh
Confidence            57889999954222222221   223568888998865433444799999999999999874

>PRK07979 acetolactate synthase 3 catalytic subunit; Validated

Probab=84.97  E-value=1.6  Score=37.51  Aligned_cols=97  Identities=15%  Similarity=0.130  Sum_probs=57.6

Q ss_pred             Cccccccccccccccccchhhhhhc---------cccc---eeeeccCe--------ee-CcceEEeeccchhhHhhhc-
Q psy15576         10 HKVLQITQTYNSFSQPHYPKLLTVQ---------IAET---YISALKAS--------QL-IPELYIAVGISGAIQHLAG-   67 (108)
Q Consensus        10 ~r~~~~~~~~~~~~~pva~kL~a~~---------i~~~---~igg~SGk--------tV-~P~lYia~GISGA~QH~~G-   67 (108)
                      |.|....+-+.++ .=+|+||++-.         ++|+   |+| +.|.        .+ ..+|.|++|-+=.-..+.+ 
T Consensus       214 G~g~~~~~a~~~l-~~lae~~~~pv~tt~~gkg~~p~~hp~~~G-~~G~~~~~~~~~~l~~aDlvl~vG~~~~~~~~~~~  291 (574)
T PRK07979        214 GGGAINAACHQQL-KELVEKLNLPVVSSLMGLGAFPATHRQSLG-MLGMHGTYEANMTMHNADVIFAVGVRFDDRTTNNL  291 (574)
T ss_pred             CCCccccchHHHH-HHHHHHhCCCEEEccccCCCCCCCCccccc-CCcCCCCHHHHHHHHhCCEEEEeCCCCcccccCCh
Confidence            4445444445333 55788888752         2222   444 2232        11 2588899997643333322 


Q ss_pred             --cCCCCeEEEecCCCCCCccc-ccCeeEeeeHHHHHHHHHhhC
Q psy15576         68 --MKDSKTIVAINKDPEAPIFQ-VSDYGLVADLFKAVPELTEKL  108 (108)
Q Consensus        68 --m~~s~~IIAIN~Dp~ApIf~-~ADygiVgD~~evlp~Li~~l  108 (108)
                        ......+|-||.|+...--. ..|+.+++|+.++|++|++++
T Consensus       292 ~~~~~~~~~i~id~d~~~i~~~~~~~~~i~~D~~~~l~~L~~~l  335 (574)
T PRK07979        292 AKYCPNATVLHIDIDPTSISKTVTADIPIVGDARQVLEQMLELL  335 (574)
T ss_pred             hhcCCCCeEEEEECCHHHhCCcccCCeEEecCHHHHHHHHHHhh
Confidence              11223588888888743322 369999999999999998753

>CHL00099 ilvB acetohydroxyacid synthase large subunit

Probab=84.20  E-value=1.4  Score=37.98  Aligned_cols=60  Identities=22%  Similarity=0.218  Sum_probs=40.4

Q ss_pred             eCcceEEeeccchhhHhhhc---cCCCCeEEEecCCCCCCc-ccccCeeEeeeHHHHHHHHHhh
Q psy15576         48 LIPELYIAVGISGAIQHLAG---MKDSKTIVAINKDPEAPI-FQVSDYGLVADLFKAVPELTEK  107 (108)
Q Consensus        48 V~P~lYia~GISGA~QH~~G---m~~s~~IIAIN~Dp~ApI-f~~ADygiVgD~~evlp~Li~~  107 (108)
                      -..+|.|++|-+=....+.+   ......+|-||.||+-.- ....|+.+++|+.++|++|++.
T Consensus       282 ~~aDlvL~lG~~~~~~~~~~~~~~~~~~~~i~id~d~~~i~~~~~~~~~i~~D~~~~L~~L~~~  345 (585)
T CHL00099        282 SECDLLIALGARFDDRVTGKLDEFACNAQVIHIDIDPAEIGKNRIPQVAIVGDVKKVLQELLEL  345 (585)
T ss_pred             HhCCEEEEECCCCcccccCCHhHcCCCCeEEEEECCHHHhCCCCCCCeEEecCHHHHHHHHHHH
Confidence            35699999996532222211   223456889999986321 2236899999999999999774

>PRK08527 acetolactate synthase 3 catalytic subunit; Validated

Probab=82.35  E-value=2.1  Score=36.65  Aligned_cols=60  Identities=23%  Similarity=0.329  Sum_probs=35.4

Q ss_pred             CcceEEeeccchhhHhhhc---cCCCCeEEEecCCCCCCc-ccccCeeEeeeHHHHHHHHHhhC
Q psy15576         49 IPELYIAVGISGAIQHLAG---MKDSKTIVAINKDPEAPI-FQVSDYGLVADLFKAVPELTEKL  108 (108)
Q Consensus        49 ~P~lYia~GISGA~QH~~G---m~~s~~IIAIN~Dp~ApI-f~~ADygiVgD~~evlp~Li~~l  108 (108)
                      .++|.|++|-+=.-..+.+   ......+|-||.||..-= .--+|+.+++|+.++|+.|++++
T Consensus       269 ~aD~vl~lG~~l~~~~~~~~~~~~~~~~~i~id~d~~~~~~~~~~~~~i~~D~~~~l~~L~~~l  332 (563)
T PRK08527        269 ECDLLISLGARFDDRVTGKLSEFAKHAKIIHVDIDPSSISKIVNADYPIVGDLKNVLKEMLEEL  332 (563)
T ss_pred             hCCEEEEeCCCCCccccCChhhcCCCCeEEEEECCHHHhCCCCCCCeEEecCHHHHHHHHHHhh
Confidence            3467777774422211111   112234677777765211 11368999999999999998753

>PRK06725 acetolactate synthase 3 catalytic subunit; Validated

Probab=81.96  E-value=2.3  Score=36.78  Aligned_cols=59  Identities=22%  Similarity=0.209  Sum_probs=38.0

Q ss_pred             cceEEeeccchhhHhhhc---cCCCCeEEEecCCCCCCc-ccccCeeEeeeHHHHHHHHHhhC
Q psy15576         50 PELYIAVGISGAIQHLAG---MKDSKTIVAINKDPEAPI-FQVSDYGLVADLFKAVPELTEKL  108 (108)
Q Consensus        50 P~lYia~GISGA~QH~~G---m~~s~~IIAIN~Dp~ApI-f~~ADygiVgD~~evlp~Li~~l  108 (108)
                      .+|.|++|-+=.-..+.+   ......+|-||.|+...= .-..|+.+++|+.++|++|++++
T Consensus       281 aDlil~vG~~~~~~~~~~~~~~~~~~~~i~id~d~~~i~~~~~~~~~i~gD~~~~l~~L~~~l  343 (570)
T PRK06725        281 CDLLLALGVRFDDRVTGKLELFSPHSKKVHIDIDPSEFHKNVAVEYPVVGDVKKALHMLLHMS  343 (570)
T ss_pred             CCEEEEeCCCCCccccCcccccCCCCeEEEEeCCHHHhCCCCCCCeEEecCHHHHHHHHHHhc
Confidence            488888886632222211   122235778888887521 11368999999999999998753

>cd01409 SIRT4 SIRT4: Eukaryotic and prokaryotic group (class2) which includes human sirtuin SIRT4 and several bacterial homologs; and are members of the SIR2 family of proteins, silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone deacetylation

Probab=81.38  E-value=1.7  Score=34.45  Aligned_cols=52  Identities=12%  Similarity=0.067  Sum_probs=38.3

Q ss_pred             CcceEEeeccchhhHhhhcc-----CCCCeEEEecCCCCCCcccccCeeEeeeHHHHH
Q psy15576         49 IPELYIAVGISGAIQHLAGM-----KDSKTIVAINKDPEAPIFQVSDYGLVADLFKAV  101 (108)
Q Consensus        49 ~P~lYia~GISGA~QH~~Gm-----~~s~~IIAIN~Dp~ApIf~~ADygiVgD~~evl  101 (108)
                      +.+|.|.+|-|.++.=.+.+     +.-..+|.||.+|. |.=..||+.+-+++.|+|
T Consensus       204 ~aDlllviGTSl~V~pa~~l~~~a~~~g~~viiIN~~~t-~~d~~a~~~i~~~~~~~l  260 (260)
T cd01409         204 EADALLVLGSSLMVYSGYRFVLAAAEAGLPIAIVNIGPT-RADHLATLKVDARCGEVL  260 (260)
T ss_pred             cCCEEEEeCcCceecchhhHHHHHHHCCCcEEEEcCCCC-CCCccccEEEeCChhhhC
Confidence            36899999999998633322     12245888999984 455679999999998874

Sir2 proteins have been shown to regulate gene silencing, DNA repair, metabolic enzymes, and life span.

>PRK08327 acetolactate synthase catalytic subunit; Validated

Probab=80.82  E-value=3.1  Score=35.83  Aligned_cols=60  Identities=22%  Similarity=0.207  Sum_probs=40.0

Q ss_pred             CcceEEeeccchhhH-hhhccCCCCeEEEecCCCCCC-c---ccccCeeEeeeHHHHHHHHHhhC
Q psy15576         49 IPELYIAVGISGAIQ-HLAGMKDSKTIVAINKDPEAP-I---FQVSDYGLVADLFKAVPELTEKL  108 (108)
Q Consensus        49 ~P~lYia~GISGA~Q-H~~Gm~~s~~IIAIN~Dp~Ap-I---f~~ADygiVgD~~evlp~Li~~l  108 (108)
                      .++|.|++|-+-... +.........+|-||.|+..- .   .-..|+.|++|+..++++|++++
T Consensus       279 ~aDlvl~lG~~l~~~~~~~~~~~~~~vi~Id~d~~~~~~~~~~~~~~~~i~~D~~~~l~~L~~~l  343 (569)
T PRK08327        279 EADLVLVVDSDVPWIPKKIRPDADARVIQIDVDPLKSRIPLWGFPCDLCIQADTSTALDQLEERL  343 (569)
T ss_pred             hCCEEEEeCCCCCCccccccCCCCCeEEEEeCChhhhcccccCcceeEEEecCHHHHHHHHHHHH
Confidence            478999999753211 111122334688899988631 1   22359999999999999998753

>PRK08266 hypothetical protein; Provisional

Probab=80.82  E-value=2.3  Score=36.02  Aligned_cols=59  Identities=20%  Similarity=0.240  Sum_probs=38.0

Q ss_pred             CcceEEeeccchhhHhhhcc---CCCCeEEEecCCCCCCcccccCeeEeeeHHHHHHHHHhhC
Q psy15576         49 IPELYIAVGISGAIQHLAGM---KDSKTIVAINKDPEAPIFQVSDYGLVADLFKAVPELTEKL  108 (108)
Q Consensus        49 ~P~lYia~GISGA~QH~~Gm---~~s~~IIAIN~Dp~ApIf~~ADygiVgD~~evlp~Li~~l  108 (108)
                      .++|.|++|-+=... +.+-   .....+|-||.|++.--.-..|+.|++|+.++|++|++++
T Consensus       263 ~aDlvl~lG~~~~~~-~~~~~~~~~~~~~i~id~d~~~~~~~~~~~~i~~D~~~~l~~L~~~l  324 (542)
T PRK08266        263 QTDVVIGIGSRLELP-TFRWPWRPDGLKVIRIDIDPTEMRRLKPDVAIVADAKAGTAALLDAL  324 (542)
T ss_pred             hCCEEEEeCCCcCcc-cccccccCCCCcEEEEECCHHHhCCcCCCceEecCHHHHHHHHHHhh
Confidence            568888888542222 2221   1224577888876642112469999999999999998753

>PRK06154 hypothetical protein; Provisional

Probab=80.75  E-value=2.8  Score=36.21  Aligned_cols=38  Identities=29%  Similarity=0.257  Sum_probs=26.1

Q ss_pred             CCeEEEecCCCCCCcc-cccCeeEeeeHHHHHHHHHhhC
Q psy15576         71 SKTIVAINKDPEAPIF-QVSDYGLVADLFKAVPELTEKL  108 (108)
Q Consensus        71 s~~IIAIN~Dp~ApIf-~~ADygiVgD~~evlp~Li~~l  108 (108)
                      .+.||-||.||+..=- ...|+.+++|+.++|++|+++|
T Consensus       303 ~~~vI~id~d~~~~~~~~~~~~~i~~D~~~~L~~L~~~l  341 (565)
T PRK06154        303 GKTIIHSTLDDADLNKDYPIDHGLVGDAALVLKQMIEEL  341 (565)
T ss_pred             CCeEEEEECCHHHhccccCCCeeEEcCHHHHHHHHHHHh
Confidence            3456666666653111 1258999999999999998753

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	108
1t9g_R	333	Structure Of The Human Mcad:etf Complex Length = 33		4e-27
1efv_A	315	Three-Dimensional Structure Of Human Electron Trans		4e-27
1efp_A	307	Electron Transfer Flavoprotein (Etf) From Paracoccu		1e-24
3cls_D	321	Crystal Structure Of The R236c Mutant Of Etf From M		2e-13
1o94_D	320	Ternary Complex Between Trimethylamine Dehydrogenas		2e-13
3clu_D	321	Crystal Structure Of The R236k Mutant From Methylop		2e-13
3clt_D	321	Crystal Structure Of The R236e Mutant Of Methylophi		2e-13
3clr_D	321	Crystal Structure Of The R236a Etf Mutant From M. M		2e-13

>pdb|1T9G|R Chain R, Structure Of The Human Mcad:etf Complex Length = 333

Iteration: 1
 Score =  116 bits (290), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 54/59 (91%), Positives = 57/59 (96%)
Query: 50  PELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVSDYGLVADLFKAVPELTEKL 108
           PELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQV+DYG+VADLFK VPE+TE L
Sbjct: 272 PELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVADYGIVADLFKVVPEMTEIL 330

>pdb|1EFV|A Chain A, Three-Dimensional Structure Of Human Electron Transfer Flavoprotein To 2.1 A Resolution Length = 315

Iteration: 1
 Score =  116 bits (290), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 54/59 (91%), Positives = 57/59 (96%)
Query: 50  PELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVSDYGLVADLFKAVPELTEKL 108
           PELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQV+DYG+VADLFK VPE+TE L
Sbjct: 254 PELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVADYGIVADLFKVVPEMTEIL 312

>pdb|1EFP|A Chain A, Electron Transfer Flavoprotein (Etf) From Paracoccus Denitrificans Length = 307

Iteration: 1
 Score =  108 bits (269), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 50/59 (84%), Positives = 53/59 (89%)
Query: 50  PELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVSDYGLVADLFKAVPELTEKL 108
           PELY+AVGISGAIQHLAGMKDSK IVAINKD EAPIFQ++DYGLV DLF  VPELT KL
Sbjct: 249 PELYVAVGISGAIQHLAGMKDSKVIVAINKDEEAPIFQIADYGLVGDLFSVVPELTGKL 307

>pdb|3CLS|D Chain D, Crystal Structure Of The R236c Mutant Of Etf From Methylophilus Methylotrophus Length = 321

Iteration: 1
 Score = 70.9 bits (172), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 32/58 (55%), Positives = 44/58 (75%)
Query: 51  ELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVSDYGLVADLFKAVPELTEKL 108
           +LY+A+GISG+IQH+AGMK   TI+A+N DP A IF ++ YG+VAD+F    EL  +L
Sbjct: 262 KLYVAMGISGSIQHMAGMKHVPTIIAVNTDPGASIFTIAKYGIVADIFDIEEELKAQL 319

>pdb|1O94|D Chain D, Ternary Complex Between Trimethylamine Dehydrogenase And Electron Transferring Flavoprotein Length = 320

Iteration: 1
 Score = 70.9 bits (172), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 32/58 (55%), Positives = 44/58 (75%)
Query: 51  ELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVSDYGLVADLFKAVPELTEKL 108
           +LY+A+GISG+IQH+AGMK   TI+A+N DP A IF ++ YG+VAD+F    EL  +L
Sbjct: 261 KLYVAMGISGSIQHMAGMKHVPTIIAVNTDPGASIFTIAKYGIVADIFDIEEELKAQL 318

>pdb|3CLU|D Chain D, Crystal Structure Of The R236k Mutant From Methylophilus Methylotrophus Etf Length = 321

Iteration: 1
 Score = 70.9 bits (172), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 32/58 (55%), Positives = 44/58 (75%)
Query: 51  ELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVSDYGLVADLFKAVPELTEKL 108
           +LY+A+GISG+IQH+AGMK   TI+A+N DP A IF ++ YG+VAD+F    EL  +L
Sbjct: 262 KLYVAMGISGSIQHMAGMKHVPTIIAVNTDPGASIFTIAKYGIVADIFDIEEELKAQL 319

>pdb|3CLT|D Chain D, Crystal Structure Of The R236e Mutant Of Methylophilus Methylotrophus Etf Length = 321

Iteration: 1
 Score = 70.9 bits (172), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 32/58 (55%), Positives = 44/58 (75%)
Query: 51  ELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVSDYGLVADLFKAVPELTEKL 108
           +LY+A+GISG+IQH+AGMK   TI+A+N DP A IF ++ YG+VAD+F    EL  +L
Sbjct: 262 KLYVAMGISGSIQHMAGMKHVPTIIAVNTDPGASIFTIAKYGIVADIFDIEEELKAQL 319

>pdb|3CLR|D Chain D, Crystal Structure Of The R236a Etf Mutant From M. Methylotrophus Length = 321

Iteration: 1
 Score = 70.9 bits (172), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 32/58 (55%), Positives = 44/58 (75%)
Query: 51  ELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVSDYGLVADLFKAVPELTEKL 108
           +LY+A+GISG+IQH+AGMK   TI+A+N DP A IF ++ YG+VAD+F    EL  +L
Sbjct: 262 KLYVAMGISGSIQHMAGMKHVPTIIAVNTDPGASIFTIAKYGIVADIFDIEEELKAQL 319

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	108
1efv_A	315	Electron transfer flavoprotein; electron transport	2e-48
1efp_A	307	ETF, protein (electron transfer flavoprotein); ele	3e-48
1o97_D	320	Electron transferring flavoprotein alpha-subunit;	9e-46

>1efv_A Electron transfer flavoprotein; electron transport, glutaric acidemia type II; HET: FAD AMP; 2.10A {Homo sapiens} SCOP: c.26.2.3 c.31.1.2 PDB: 2a1u_A* 1t9g_R* 2a1t_R* Length = 315

 Score =  155 bits (394), Expect = 2e-48
 Identities = 54/59 (91%), Positives = 57/59 (96%)

Query: 50  PELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVSDYGLVADLFKAVPELTEKL 108
           PELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQV+DYG+VADLFK VPE+TE L
Sbjct: 254 PELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVADYGIVADLFKVVPEMTEIL 312

>1efp_A ETF, protein (electron transfer flavoprotein); electron transport, glutaric acidemia type II; HET: FAD AMP; 2.60A {Paracoccus denitrificans} SCOP: c.26.2.3 c.31.1.2 Length = 307

 Score =  154 bits (393), Expect = 3e-48
 Identities = 50/59 (84%), Positives = 53/59 (89%)

Query: 50  PELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVSDYGLVADLFKAVPELTEKL 108
           PELY+AVGISGAIQHLAGMKDSK IVAINKD EAPIFQ++DYGLV DLF  VPELT KL
Sbjct: 249 PELYVAVGISGAIQHLAGMKDSKVIVAINKDEEAPIFQIADYGLVGDLFSVVPELTGKL 307

>1o97_D Electron transferring flavoprotein alpha-subunit; FAD binding; HET: AMP FAD; 1.6A {Methylophilus methylotrophus} SCOP: c.26.2.3 c.31.1.2 PDB: 1o95_D* 1o96_B* 1o94_D* 3clu_D* 3clt_D* 3clr_D* 3cls_D* Length = 320

 Score =  148 bits (377), Expect = 9e-46
 Identities = 32/59 (54%), Positives = 44/59 (74%)

Query: 50  PELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVSDYGLVADLFKAVPELTEKL 108
            +LY+A+GISG+IQH+AGMK   TI+A+N DP A IF ++ YG+VAD+F    EL  +L
Sbjct: 260 CKLYVAMGISGSIQHMAGMKHVPTIIAVNTDPGASIFTIAKYGIVADIFDIEEELKAQL 318

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	108
1efp_A	307	ETF, protein (electron transfer flavoprotein); ele	100.0
1efv_A	315	Electron transfer flavoprotein; electron transport	100.0
1o97_D	320	Electron transferring flavoprotein alpha-subunit;	100.0
1s5p_A	235	NAD-dependent deacetylase; protein deacetylase, SI	96.54
1q1a_A	289	HST2 protein; ternary complex, histone deacetylase	96.27
1yc5_A	246	NAD-dependent deacetylase; SIR2, sirtuin, SIR2TM,	95.97
2hjh_A	354	NAD-dependent histone deacetylase SIR2; protein, s	95.84
1ma3_A	253	SIR2-AF2, transcriptional regulatory protein, SIR2	95.73
1q14_A	361	HST2 protein; histone deacetylase, hydrolase; 2.50	95.63
1m2k_A	249	Silent information regulator 2; protein-ligand com	95.59
3k35_A	318	NAD-dependent deacetylase sirtuin-6; rossmann fold	95.32
1j8f_A	323	SIRT2, sirtuin 2, isoform 1, silencing INFO; gene	95.23
3riy_A	273	NAD-dependent deacetylase sirtuin-5; desuccinylase	95.21
3glr_A	285	NAD-dependent deacetylase sirtuin-3, mitochondria;	95.15
3pki_A	355	NAD-dependent deacetylase sirtuin-6; ADP ribose, s	94.88
4iao_A	492	NAD-dependent histone deacetylase SIR2; protein co	94.57
3u31_A	290	SIR2A, transcriptional regulatory protein SIR2 hom	93.63
3lq1_A	578	2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-	84.86
1ozh_A	566	ALS, acetolactate synthase, catabolic; acetohydrox	84.74
1q6z_A	528	BFD, BFDC, benzoylformate decarboxylase; lyase, ca	83.1
2x7j_A	604	2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene -	81.33
3qe1_A	107	Sorting nexin-27, G protein-activated inward RECT	80.92
3eya_A	549	Pyruvate dehydrogenase [cytochrome]; pyruvate oxid	80.43

>1efp_A ETF, protein (electron transfer flavoprotein); electron transport, glutaric acidemia type II; HET: FAD AMP; 2.60A {Paracoccus denitrificans} SCOP: c.26.2.3 c.31.1.2

Probab=100.00  E-value=7.9e-48  Score=307.13  Aligned_cols=102  Identities=53%  Similarity=0.749  Sum_probs=94.8

Q ss_pred             eecCCccccccccccccccccchhhhhhc-----------cccceeeeccCeeeCcceEEeeccchhhHhhhccCCCCeE
Q psy15576          6 RNSNHKVLQITQTYNSFSQPHYPKLLTVQ-----------IAETYISALKASQLIPELYIAVGISGAIQHLAGMKDSKTI   74 (108)
Q Consensus         6 ~~s~~r~~~~~~~~~~~~~pva~kL~a~~-----------i~~~~igg~SGktV~P~lYia~GISGA~QH~~Gm~~s~~I   74 (108)
                      =+||||||++.||| ++++++||+||++-           ++..++.|+|||+|+|+||||||||||+||++||++||+|
T Consensus       195 vVsgGRG~~~~e~f-~~~~~LA~~Lga~vgaSR~~vd~Gw~~~~~QVGqTGk~V~P~lYiA~GISGAiQHlaGm~~s~~I  273 (307)
T 1efp_A          195 VVSGGRGLGSKESF-AIIEELADKLGAAVGASRAAVDSGYAPNDWQVGQTGKVVAPELYVAVGISGAIQHLAGMKDSKVI  273 (307)
T ss_dssp             EEEECGGGCSSSTT-HHHHHHHHHHTCEEEECHHHHHTTSSCGGGBBSSSSBCCCCSEEEEESCCCCHHHHTTTTTCSEE
T ss_pred             EEEcCCcCCCHHHH-HHHHHHHHHhCCceeecHHHHhCCCCChhhEeccCCcccCCceEEEEeccCcHHHHhhhccCCEE
Confidence            37999999999999 68899999999872           5555555599999999999999999999999999999999


Q ss_pred             EEecCCCCCCcccccCeeEeeeHHHHHHHHHhhC
Q psy15576         75 VAINKDPEAPIFQVSDYGLVADLFKAVPELTEKL  108 (108)
Q Consensus        75 IAIN~Dp~ApIf~~ADygiVgD~~evlp~Li~~l  108 (108)
                      ||||+||+||||++||||||||++|++|+|+++|
T Consensus       274 VAIN~D~~ApIF~~ADygiVgDl~~v~P~L~~~l  307 (307)
T 1efp_A          274 VAINKDEEAPIFQIADYGLVGDLFSVVPELTGKL  307 (307)
T ss_dssp             EEEESCTTCGGGGTCSEEEESCHHHHHHHHHHTC
T ss_pred             EEEeCCCCCCcccccCeEEeeeHHHHHHHHHhhC
Confidence            9999999999999999999999999999999986

>1efv_A Electron transfer flavoprotein; electron transport, glutaric acidemia type II; HET: FAD AMP; 2.10A {Homo sapiens} SCOP: c.26.2.3 c.31.1.2 PDB: 2a1u_A* 1t9g_R* 2a1t_R*

Probab=100.00  E-value=1.3e-47  Score=306.75  Aligned_cols=102  Identities=56%  Similarity=0.782  Sum_probs=94.7

Q ss_pred             eecCCccccccccccccccccchhhhhhc-----------cccceeeeccCeeeCcceEEeeccchhhHhhhccCCCCeE
Q psy15576          6 RNSNHKVLQITQTYNSFSQPHYPKLLTVQ-----------IAETYISALKASQLIPELYIAVGISGAIQHLAGMKDSKTI   74 (108)
Q Consensus         6 ~~s~~r~~~~~~~~~~~~~pva~kL~a~~-----------i~~~~igg~SGktV~P~lYia~GISGA~QH~~Gm~~s~~I   74 (108)
                      =+||||||++.||| ++++++||+||++-           ++..++.|+|||+|+|+||||||||||+||++||++||+|
T Consensus       200 vVsgGrG~~~~e~f-~~~~~LA~~Lga~vgaSR~~vd~Gw~~~~~QVGqTGk~V~P~lYiA~GISGAiQHlaGm~~s~~I  278 (315)
T 1efv_A          200 VVSGGRGLKSGENF-KLLYDLADQLHAAVGASRAAVDAGFVPNDMQVGQTGKIVAPELYIAVGISGAIQHLAGMKDSKTI  278 (315)
T ss_dssp             EEEECGGGCSTGGG-HHHHHHHHHHTCEEEECHHHHHTTSSCGGGBBSTTSBCCCCSEEEEESCCCCHHHHTTTTTCSEE
T ss_pred             EEEcCCcCCChHHH-HHHHHHHHHhCCceeecHHHHhCCCCCHHheeccCCcccCcceEEEecccCcHHHHhhcccCCEE
Confidence            37999999999999 68899999999872           5555555599999999999999999999999999999999


Q ss_pred             EEecCCCCCCcccccCeeEeeeHHHHHHHHHhhC
Q psy15576         75 VAINKDPEAPIFQVSDYGLVADLFKAVPELTEKL  108 (108)
Q Consensus        75 IAIN~Dp~ApIf~~ADygiVgD~~evlp~Li~~l  108 (108)
                      ||||+||+||||++||||||||++|++|+|+++|
T Consensus       279 VAIN~D~~ApIf~~ADygiVgDl~~v~P~L~~~l  312 (315)
T 1efv_A          279 VAINKDPEAPIFQVADYGIVADLFKVVPEMTEIL  312 (315)
T ss_dssp             EEEESCTTCGGGGTCSEEEESCHHHHHHHHHHHT
T ss_pred             EEEeCCCCCCcchhcCeEEeeeHHHHHHHHHHHH
Confidence            9999999999999999999999999999999976

>1o97_D Electron transferring flavoprotein alpha-subunit; FAD binding; HET: AMP FAD; 1.6A {Methylophilus methylotrophus} SCOP: c.26.2.3 c.31.1.2 PDB: 1o95_D* 1o96_B* 1o94_D* 3clu_D* 3clt_D* 3clr_D* 3cls_D*

Probab=100.00  E-value=3.4e-47  Score=304.88  Aligned_cols=102  Identities=32%  Similarity=0.465  Sum_probs=94.7

Q ss_pred             eecCCccccccccccccccccchhhhhhc-----------cccceeeeccCeeeCc-ceEEeeccchhhHhhhccCCCCe
Q psy15576          6 RNSNHKVLQITQTYNSFSQPHYPKLLTVQ-----------IAETYISALKASQLIP-ELYIAVGISGAIQHLAGMKDSKT   73 (108)
Q Consensus         6 ~~s~~r~~~~~~~~~~~~~pva~kL~a~~-----------i~~~~igg~SGktV~P-~lYia~GISGA~QH~~Gm~~s~~   73 (108)
                      =+||||||++.||| ++++++||+||++-           ++..++.|+|||+|+| +||||||||||+||++||++||+
T Consensus       205 vVsgGRG~~~~e~f-~~~~~LA~~Lga~vgaSR~~vd~Gw~~~~~QVGqTGk~V~P~~lYiA~GISGAiQHlaGm~~s~~  283 (320)
T 1o97_D          205 IMSIGRGIGEETNV-EQFRELADEAGATLCCSRPIADAGWLPKSRQVGQSGKVVGSCKLYVAMGISGSIQHMAGMKHVPT  283 (320)
T ss_dssp             EEEECGGGCSGGGH-HHHHHHHHHHTCEEEECHHHHHTTSSCGGGBBSTTSBCCTTCSEEEEESCCCCHHHHHHHTTCSE
T ss_pred             EEEcCCccCChHHH-HHHHHHHHHhCCceeecHHHHhCCCCChhhEeecCceEecccceEEEEeccCcHHHHhhcccCCE
Confidence            37999999999999 68899999999872           4555555599999999 99999999999999999999999


Q ss_pred             EEEecCCCCCCcccccCeeEeeeHHHHHHHHHhhC
Q psy15576         74 IVAINKDPEAPIFQVSDYGLVADLFKAVPELTEKL  108 (108)
Q Consensus        74 IIAIN~Dp~ApIf~~ADygiVgD~~evlp~Li~~l  108 (108)
                      |||||+||+||||++||||||||++|++|+|+++|
T Consensus       284 IVAIN~D~~ApIF~~ADygiVgDl~~vvP~L~~~l  318 (320)
T 1o97_D          284 IIAVNTDPGASIFTIAKYGIVADIFDIEEELKAQL  318 (320)
T ss_dssp             EEEECSCTTCGGGGTCSEEECSCHHHHHHHHHHHC
T ss_pred             EEEEeCCCCCCcccccCeEEeeeHHHHHHHHHHHH
Confidence            99999999999999999999999999999999976

>1s5p_A NAD-dependent deacetylase; protein deacetylase, SIR2 homologue, hydrolase; HET: ALY; 1.96A {Escherichia coli} SCOP: c.31.1.5

Probab=96.54  E-value=0.0019  Score=48.89  Aligned_cols=58  Identities=28%  Similarity=0.422  Sum_probs=43.8

Q ss_pred             cceEEeeccchhhHhhhcc-----CCCCeEEEecCCCCCCcccccCeeEeeeHHHHHHHHHhhC
Q psy15576         50 PELYIAVGISGAIQHLAGM-----KDSKTIVAINKDPEAPIFQVSDYGLVADLFKAVPELTEKL  108 (108)
Q Consensus        50 P~lYia~GISGA~QH~~Gm-----~~s~~IIAIN~Dp~ApIf~~ADygiVgD~~evlp~Li~~l  108 (108)
                      .+|+|.+|.|+.++=.+++     +.-..+|.||.+|. +.-+.+|+.+.+|+.|+||+|.++|
T Consensus       168 adl~lviGTSl~V~Pa~~l~~~a~~~g~~~i~iN~~~t-~~~~~~~~~i~~~~~~~l~~l~~~l  230 (235)
T 1s5p_A          168 ADIFIAIGTSGHVYPAAGFVHEAKLHGAHTVELNLEPS-QVGNEFAEKYYGPASQVVPEFVEKL  230 (235)
T ss_dssp             CSEEEEESCCTTEETGGGHHHHHHHTTCEEEEEESSSC-C---CCSEEEESCHHHHHHHHHHHH
T ss_pred             CCEEEEECcCCchhhHHHHHHHHHHcCCeEEEEECCCC-CCCccccEEEeCCHHHHHHHHHHHH
Confidence            4799999999988544443     12346889999985 5667899999999999999998753

>1q1a_A HST2 protein; ternary complex, histone deacetylase, 2'-O-ADP ribose,, gene regulation; HET: ALY OAD; 1.50A {Saccharomyces cerevisiae} SCOP: c.31.1.5 PDB: 1szd_A* 1szc_A* 2od7_A* 2od9_A* 2qqf_A* 2qqg_A* 1q17_A* 2od2_A*

Probab=96.27  E-value=0.0031  Score=49.10  Aligned_cols=61  Identities=21%  Similarity=0.115  Sum_probs=46.0

Q ss_pred             eCcceEEeeccchhhHhhhcc----CCCCeEEEecCCCCCCc---ccccCeeEeeeHHHHHHHHHhhC
Q psy15576         48 LIPELYIAVGISGAIQHLAGM----KDSKTIVAINKDPEAPI---FQVSDYGLVADLFKAVPELTEKL  108 (108)
Q Consensus        48 V~P~lYia~GISGA~QH~~Gm----~~s~~IIAIN~Dp~ApI---f~~ADygiVgD~~evlp~Li~~l  108 (108)
                      -+.+|+|.+|.|+.++=.+++    +.-..+|.||.+|..+.   -+.+|+.+.+|+.+++|+|.++|
T Consensus       210 ~~~DlllviGTSl~V~Pa~~l~~~~~~~~~~v~IN~~~~~~~~~~~~~~d~~i~~~~~~~l~~l~~~l  277 (289)
T 1q1a_A          210 PQQPLVIVVGTSLAVYPFASLPEEIPRKVKRVLCNLETVGDFKANKRPTDLIVHQYSDEFAEQLVEEL  277 (289)
T ss_dssp             CCCCEEEEESCCCCEETTTHHHHHSCTTSEEEEESSSCCTHHHHSCCTTCEEECCCHHHHHHHHHHHH
T ss_pred             ccCCEEEEEccCCChhhHHHHHHHHhcCCCEEEEECCCcccCCCCCcceeEEEeCCHHHHHHHHHHHc
Confidence            367999999999877544443    32335778999997532   23589999999999999998753

>1yc5_A NAD-dependent deacetylase; SIR2, sirtuin, SIR2TM, SIRT1, nicotinamide, hydrolase; HET: ALY; 1.40A {Thermotoga maritima} SCOP: c.31.1.5 PDB: 2h2d_A* 2h2f_A 2h2g_A* 2h2h_A* 2h2i_A* 2h4f_A* 2h4j_A* 3d4b_A* 3d81_A* 3pdh_A* 2h4h_A* 3jr3_A* 2h59_A*

Probab=95.97  E-value=0.0052  Score=46.72  Aligned_cols=58  Identities=17%  Similarity=0.235  Sum_probs=46.6

Q ss_pred             cceEEeeccchhhHhhhcc-----CCCCeEEEecCCCCCCcccccCeeEeeeHHHHHHHHHhhC
Q psy15576         50 PELYIAVGISGAIQHLAGM-----KDSKTIVAINKDPEAPIFQVSDYGLVADLFKAVPELTEKL  108 (108)
Q Consensus        50 P~lYia~GISGA~QH~~Gm-----~~s~~IIAIN~Dp~ApIf~~ADygiVgD~~evlp~Li~~l  108 (108)
                      .+|+|.+|-|+.++=.+++     +.-..+|.||.+|. +.-+.+|+.+-+|+.|++|+|.++|
T Consensus       181 adl~lviGTSl~V~P~~~l~~~a~~~g~~~i~IN~~~~-~~d~~~~~~i~~~~~~~l~~l~~~l  243 (246)
T 1yc5_A          181 ASLMIVLGSSLVVYPAAELPLITVRSGGKLVIVNLGET-PFDDIATLKYNMDVVEFARRVMEEG  243 (246)
T ss_dssp             CSEEEEESCCSCEETGGGHHHHHHHHTCEEEEECSSCC-TTGGGCSEEECSCHHHHHHHHHHHH
T ss_pred             CCEEEEECCCCcchhHHHHHHHHHHcCCeEEEEeCCCC-CCCcceeEEEeCCHHHHHHHHHHHc
Confidence            4899999999988766655     12346889999875 4566889999999999999998764

>2hjh_A NAD-dependent histone deacetylase SIR2; protein, sirtuin, acetyl-ADP-ribose, nicotinamide, hydrolase; HET: XYQ; 1.85A {Saccharomyces cerevisiae}

Probab=95.84  E-value=0.01  Score=47.77  Aligned_cols=58  Identities=21%  Similarity=0.224  Sum_probs=45.7

Q ss_pred             CcceEEeeccchhhHhhhcc----CCCCeEEEecCCCCCCcccccCeeEeeeHHHHHHHHHhhC
Q psy15576         49 IPELYIAVGISGAIQHLAGM----KDSKTIVAINKDPEAPIFQVSDYGLVADLFKAVPELTEKL  108 (108)
Q Consensus        49 ~P~lYia~GISGA~QH~~Gm----~~s~~IIAIN~Dp~ApIf~~ADygiVgD~~evlp~Li~~l  108 (108)
                      +.+|+|.+|.|.+++=.+++    +....+|.||.+|..  ...+|+.|.||+.+++|+|.++|
T Consensus       255 ~aDllLviGTSL~V~Paa~lv~~~~~~~~~v~IN~~~t~--~~~~dl~i~g~~~~vl~~L~~~l  316 (354)
T 2hjh_A          255 ECDLLICIGTSLKVAPVSEIVNMVPSHVPQVLINRDPVK--HAEFDLSLLGYCDDIAAMVAQKC  316 (354)
T ss_dssp             TCCEEEEESCCCCEETGGGHHHHSCTTSCEEEEESSCCT--TSCCSEEEESCHHHHHHHHHHHH
T ss_pred             hCCEEEEECcCCCchhHHHHHHHHhcCCcEEEEcCCCCC--CCCcCEEEeCCHHHHHHHHHHHc
Confidence            46899999999987655543    323368899999875  25699999999999999998753

>1ma3_A SIR2-AF2, transcriptional regulatory protein, SIR2 family; enzyme-substrate complex, protein binding, transcription; HET: ALY MES; 2.00A {Archaeoglobus fulgidus} SCOP: c.31.1.5 PDB: 1s7g_A* 1yc2_A*

Probab=95.73  E-value=0.0065  Score=46.44  Aligned_cols=58  Identities=17%  Similarity=0.328  Sum_probs=45.9

Q ss_pred             cceEEeeccchhhHhhhcc-----CCCCeEEEecCCCCCCcccccCeeEeeeHHHHHHHHHhhC
Q psy15576         50 PELYIAVGISGAIQHLAGM-----KDSKTIVAINKDPEAPIFQVSDYGLVADLFKAVPELTEKL  108 (108)
Q Consensus        50 P~lYia~GISGA~QH~~Gm-----~~s~~IIAIN~Dp~ApIf~~ADygiVgD~~evlp~Li~~l  108 (108)
                      .+|+|.+|-|..++=.+++     +.-..+|.||.++. +.-+.+|+.+-+|+.++||+|.+.|
T Consensus       184 adl~lviGTSl~V~P~~~l~~~a~~~g~~~i~iN~~~~-~~d~~~~~~i~~~~~~~l~~l~~~l  246 (253)
T 1ma3_A          184 CDAFMVVGSSLVVYPAAELPYIAKKAGAKMIIVNAEPT-MADPIFDVKIIGKAGEVLPKIVEEV  246 (253)
T ss_dssp             CSEEEEESCCSCEETGGGHHHHHHHHTCEEEEEESSCC-TTGGGCSEEEESCHHHHHHHHHHHH
T ss_pred             CCEEEEECCCceeccHHHHHHHHHHcCCeEEEEeCCCC-CCCCceeEEEeCCHHHHHHHHHHHH
Confidence            4899999999888665555     11346889999875 4566799999999999999998753

>1q14_A HST2 protein; histone deacetylase, hydrolase; 2.50A {Saccharomyces cerevisiae} SCOP: c.31.1.5

Probab=95.63  E-value=0.0085  Score=48.75  Aligned_cols=62  Identities=21%  Similarity=0.119  Sum_probs=46.1

Q ss_pred             eeCcceEEeeccchhhHhhhcc----CCCCeEEEecCCCCCCc---ccccCeeEeeeHHHHHHHHHhhC
Q psy15576         47 QLIPELYIAVGISGAIQHLAGM----KDSKTIVAINKDPEAPI---FQVSDYGLVADLFKAVPELTEKL  108 (108)
Q Consensus        47 tV~P~lYia~GISGA~QH~~Gm----~~s~~IIAIN~Dp~ApI---f~~ADygiVgD~~evlp~Li~~l  108 (108)
                      .-+.+|+|.+|.|+.++=.+++    +.-..+|.||.+|..+.   -..+|+.|-+|+.+++|+|.+.|
T Consensus       217 ~~~aDllLviGTSl~V~Paa~l~~~~~~g~~~v~IN~~~t~~~~~~~~~~d~~i~g~~~evl~~L~~~L  285 (361)
T 1q14_A          217 HPQQPLVIVVGTSLAVYPFASLPEEIPRKVKRVLCNLETVGDFKANKRPTDLIVHQYSDEFAEQLVEEL  285 (361)
T ss_dssp             --CCCEEEEESCCCCSTTGGGHHHHSCTTSEEEEESSSCCHHHHHTCCTTCEEECSCHHHHHHHHHHHH
T ss_pred             hccCCEEEEECCCCCchhHHHHHHHHhcCCeEEEEeCCCccccccCcccccEEEeCCHHHHHHHHHHHc
Confidence            3467999999999987655554    32335778999986422   24589999999999999998753

>1m2k_A Silent information regulator 2; protein-ligand complex, gene regulation; HET: APR; 1.47A {Archaeoglobus fulgidus} SCOP: c.31.1.5 PDB: 1m2g_A* 1m2h_A* 1m2j_A* 1m2n_A* 1ici_A*

Probab=95.59  E-value=0.014  Score=44.46  Aligned_cols=58  Identities=24%  Similarity=0.419  Sum_probs=45.6

Q ss_pred             cceEEeeccchhhHhhhcc-----CCCCeEEEecCCCCCCcccccCeeEeeeHHHHHHHHHhhC
Q psy15576         50 PELYIAVGISGAIQHLAGM-----KDSKTIVAINKDPEAPIFQVSDYGLVADLFKAVPELTEKL  108 (108)
Q Consensus        50 P~lYia~GISGA~QH~~Gm-----~~s~~IIAIN~Dp~ApIf~~ADygiVgD~~evlp~Li~~l  108 (108)
                      .+|+|.+|-|+.++=.+++     +.-..+|.||.++.. .-+.+|+.+-+|+.+++|+|.++|
T Consensus       178 adlllviGTSl~V~P~~~l~~~a~~~g~~~i~IN~~~~~-~d~~~~~~i~~~~~~~l~~l~~~l  240 (249)
T 1m2k_A          178 ADVIIVAGTSAVVQPAASLPLIVKQRGGAIIEINPDETP-LTPIADYSLRGKAGEVMDELVRHV  240 (249)
T ss_dssp             CSEEEEESCCSCSTTGGGHHHHHHHTTCEEEEECSSCCT-TGGGCSEEECSCHHHHHHHHHHHH
T ss_pred             CCEEEEEccCCCccchHHHHHHHHHcCCeEEEEeCCCCC-CCcceeEEEeCCHHHHHHHHHHHH
Confidence            4899999999988755542     123468899998854 566789999999999999998753

>3k35_A NAD-dependent deacetylase sirtuin-6; rossmann fold, Zn-binding domain, structural genomics, struc genomics consortium, SGC, ADP-ribosylation; HET: APR; 2.00A {Homo sapiens}

Probab=95.32  E-value=0.019  Score=46.27  Aligned_cols=59  Identities=19%  Similarity=0.249  Sum_probs=47.8

Q ss_pred             CcceEEeeccchhhHhhhcc-----CCCCeEEEecCCCCCCcccccCeeEeeeHHHHHHHHHhhC
Q psy15576         49 IPELYIAVGISGAIQHLAGM-----KDSKTIVAINKDPEAPIFQVSDYGLVADLFKAVPELTEKL  108 (108)
Q Consensus        49 ~P~lYia~GISGA~QH~~Gm-----~~s~~IIAIN~Dp~ApIf~~ADygiVgD~~evlp~Li~~l  108 (108)
                      +.+|.|.+|-|+.++--+++     +.-..+|.||.++. +.=+.||+.|-+++.+++|+|.++|
T Consensus       206 ~aDllLViGTSL~V~Paa~l~~~a~~~G~~vviIN~~~t-~~d~~adl~i~g~~~evl~~L~~~L  269 (318)
T 3k35_A          206 NADLSITLGTSLQIRPSGNLPLATKRRGGRLVIVNLQPT-KHDRHADLRIHGYVDEVMTRLMKHL  269 (318)
T ss_dssp             TCSEEEEESCCCCSTTGGGHHHHHHHTTCEEEEECSSCC-TTGGGCSEEECSCHHHHHHHHHHHH
T ss_pred             cCCEEEEEccCCCchhhhhhHHHHHhcCCEEEEECCCCC-CCCCcccEEEeCCHHHHHHHHHHHh
Confidence            45789999999998877776     23345888999885 4567899999999999999998764

>1j8f_A SIRT2, sirtuin 2, isoform 1, silencing INFO; gene regulation, transferase; 1.70A {Homo sapiens} SCOP: c.31.1.5

Probab=95.23  E-value=0.034  Score=44.29  Aligned_cols=60  Identities=23%  Similarity=0.287  Sum_probs=46.0

Q ss_pred             CcceEEeeccchhhHhhhcc----CCCCeEEEecCCCCCC---c------------c----cccCeeEeeeHHHHHHHHH
Q psy15576         49 IPELYIAVGISGAIQHLAGM----KDSKTIVAINKDPEAP---I------------F----QVSDYGLVADLFKAVPELT  105 (108)
Q Consensus        49 ~P~lYia~GISGA~QH~~Gm----~~s~~IIAIN~Dp~Ap---I------------f----~~ADygiVgD~~evlp~Li  105 (108)
                      +.+|+|.+|.|..++=.+++    +....+|.||.++...   |            |    +.+|+.+.||+.+++++|.
T Consensus       220 ~aDlllviGTSl~V~P~a~l~~~~~~~~~~v~IN~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~gd~~~~l~~L~  299 (323)
T 1j8f_A          220 KVDLLLVMGTSLQVQPFASLISKAPLSTPRLLINKEKAGQSDPFLGMIMGLGGGMDFDSKKAYRDVAWLGECDQGCLALA  299 (323)
T ss_dssp             SCSEEEEESSCSCSHHHHHHHTTSCTTCCEEEEESSCCCCCCHHHHHHHHHHTCCCSSSTTCCSEEEEESCHHHHHHHHH
T ss_pred             CCCEEEEEeeCcccHHHHHHHHHHHcCCcEEEEeCCCCCCCcccccccccccccccccccccceeEEEeCCHHHHHHHHH
Confidence            67999999999998755544    2224567899988642   1            1    4589999999999999998


Q ss_pred             hhC
Q psy15576        106 EKL  108 (108)
Q Consensus       106 ~~l  108 (108)
                      ++|
T Consensus       300 ~~l  302 (323)
T 1j8f_A          300 ELL  302 (323)
T ss_dssp             HHT
T ss_pred             HHc
Confidence            765

>3riy_A NAD-dependent deacetylase sirtuin-5; desuccinylase, demalonylase, posttranslational modification, binding domain, rossmann fold domain; HET: SLL NAD; 1.55A {Homo sapiens} SCOP: c.31.1.5 PDB: 3rig_A* 4f4u_A* 4f56_A* 4hda_A* 2b4y_A* 2nyr_A* 4g1c_A*

Probab=95.21  E-value=0.02  Score=44.36  Aligned_cols=57  Identities=14%  Similarity=0.153  Sum_probs=45.0

Q ss_pred             CcceEEeeccchhhHhhhcc-----CCCCeEEEecCCCCCCcccccCeeEeeeHHHHHHHHHh
Q psy15576         49 IPELYIAVGISGAIQHLAGM-----KDSKTIVAINKDPEAPIFQVSDYGLVADLFKAVPELTE  106 (108)
Q Consensus        49 ~P~lYia~GISGA~QH~~Gm-----~~s~~IIAIN~Dp~ApIf~~ADygiVgD~~evlp~Li~  106 (108)
                      +.+|+|.+|.|+.+.=-+++     +.-..+|.||.+|.. .=+.+|+.+-+|+.|+||+|+.
T Consensus       212 ~aDl~lviGTSl~V~Paa~l~~~a~~~g~~~v~IN~~~t~-~d~~~~~~i~g~~~~~l~~l~~  273 (273)
T 3riy_A          212 HCDLCLVVGTSSVVYPAAMFAPQVAARGVPVAEFNTETTP-ATNRFRFHFQGPCGTTLPEALA  273 (273)
T ss_dssp             HCSEEEEESCCSCEETGGGHHHHHHHTTCCEEEEESSCCT-TGGGSSEEEESCHHHHHHHHHC
T ss_pred             cCCEEEEEeeCCcchhHHHhHHHHHHCCCEEEEECCCCCC-CCcceeEEEeCCHHHHHHHHhC
Confidence            35789999999988666665     123468899998754 5578999999999999999863

>3glr_A NAD-dependent deacetylase sirtuin-3, mitochondria; NAD dependent deacetylase, sirtuin, substrate peptide comple hydrolase, metal-binding; HET: ALY; 1.80A {Homo sapiens} PDB: 3gls_A 3glt_A* 3glu_A 4hd8_A* 4fvt_A*

Probab=95.15  E-value=0.015  Score=46.02  Aligned_cols=60  Identities=25%  Similarity=0.397  Sum_probs=47.8

Q ss_pred             CcceEEeeccchhhHhhhccC----CCCeEEEecCCCCCCc---ccccCeeEeeeHHHHHHHHHhhC
Q psy15576         49 IPELYIAVGISGAIQHLAGMK----DSKTIVAINKDPEAPI---FQVSDYGLVADLFKAVPELTEKL  108 (108)
Q Consensus        49 ~P~lYia~GISGA~QH~~Gm~----~s~~IIAIN~Dp~ApI---f~~ADygiVgD~~evlp~Li~~l  108 (108)
                      +.+|.|.+|-|+.++-.+++-    ....+|.||.+|-.+.   -..+|+.+.||+.+++|+|.+.|
T Consensus       197 ~aDlllviGTSl~V~Paa~l~~~~~~~~~~v~IN~~~~~~~~~~~~~~d~~~~g~~~~~~~~L~~~l  263 (285)
T 3glr_A          197 MADLLLILGTSLEVEPFASLTEAVRSSVPRLLINRDLVGPLAWHPRSRDVAQLGDVVHGVESLVELL  263 (285)
T ss_dssp             HCSEEEEESCCCCEETTGGGGGSSCTTSCEEEEESSCCTHHHHSCCTTEEEEESCHHHHHHHHHHHH
T ss_pred             cCCEEEEeCCCCccccHHHHHHHHhCCCcEEEECCCCcCccccCCCCccEEEcCCHHHHHHHHHHHh
Confidence            468999999999988776653    2235788999996542   25799999999999999998764

>3pki_A NAD-dependent deacetylase sirtuin-6; ADP ribose, structural genomics, structural genomics consortium, SGC, hydrolase; HET: AR6; 2.04A {Homo sapiens} PDB: 3pkj_A*

Probab=94.88  E-value=0.043  Score=45.10  Aligned_cols=59  Identities=20%  Similarity=0.263  Sum_probs=48.0

Q ss_pred             CcceEEeeccchhhHhhhcc-----CCCCeEEEecCCCCCCcccccCeeEeeeHHHHHHHHHhhC
Q psy15576         49 IPELYIAVGISGAIQHLAGM-----KDSKTIVAINKDPEAPIFQVSDYGLVADLFKAVPELTEKL  108 (108)
Q Consensus        49 ~P~lYia~GISGA~QH~~Gm-----~~s~~IIAIN~Dp~ApIf~~ADygiVgD~~evlp~Li~~l  108 (108)
                      +.+|.|.+|-|+.++=-+++     +.-..+|.||.++. +.=+.||+.|-+++.+++|+|.++|
T Consensus       206 ~aDllLViGTSL~V~Paa~Lp~~a~~~G~~vviIN~~pT-~~d~~adl~i~g~a~evl~~L~~~L  269 (355)
T 3pki_A          206 NADLSITLGTSLQIRPSGNLPLATKRRGGRLVIVNLQPT-KHDRHADLRIHGYVDEVMTRLMEHL  269 (355)
T ss_dssp             HCSEEEEESCCCCSTTGGGTTHHHHHTTCEEEEECSSCC-TTGGGCSEEECSCHHHHHHHHHHHT
T ss_pred             cCCEEEEEeeCCCchhhhhhHHHHHhcCCEEEEECCCCC-CCCCccCEEEeCCHHHHHHHHHHHh
Confidence            35789999999998877776     22346888999885 4557899999999999999998865

>4iao_A NAD-dependent histone deacetylase SIR2; protein complex, deacetylase, nucleus, hydrolase-trans complex; HET: APR; 2.90A {Saccharomyces cerevisiae}

Probab=94.57  E-value=0.051  Score=46.52  Aligned_cols=58  Identities=21%  Similarity=0.218  Sum_probs=47.1

Q ss_pred             CcceEEeeccchhhHhhhcc----CCCCeEEEecCCCCCCcccccCeeEeeeHHHHHHHHHhhC
Q psy15576         49 IPELYIAVGISGAIQHLAGM----KDSKTIVAINKDPEAPIFQVSDYGLVADLFKAVPELTEKL  108 (108)
Q Consensus        49 ~P~lYia~GISGA~QH~~Gm----~~s~~IIAIN~Dp~ApIf~~ADygiVgD~~evlp~Li~~l  108 (108)
                      +.+|.|.+|-|+.++=.+++    +....+|.||.+|-..  ..+|+.+.||+.+++++|.++|
T Consensus       393 ~aDLlLVIGTSL~VyPaA~Lv~~a~~~~p~ViIN~ept~~--~~~Dl~l~G~cdevv~~L~~~L  454 (492)
T 4iao_A          393 ECDLLICIGTSLKVAPVSEIVNMVPSHVPQVLINRDPVKH--AEFDLSLLGYCDDIAAMVAQKC  454 (492)
T ss_dssp             TCSEEEEESCCCCEETGGGHHHHSBTTSCEEEEESSCCTT--SCCSEEEESCHHHHHHHHHHHT
T ss_pred             hCCEEEEeccCCCccchhhHHHHHhcCCcEEEEcCCCCCC--CCccEEEeCCHHHHHHHHHHHh
Confidence            57899999999988766665    3334578899998753  4679999999999999998875

>3u31_A SIR2A, transcriptional regulatory protein SIR2 homologue; Zn-binding domain, rossmann fold domain; HET: MYK NAD; 2.20A {Plasmodium falciparum} PDB: 3u3d_A* 3jwp_A*

Probab=93.63  E-value=0.053  Score=42.77  Aligned_cols=54  Identities=24%  Similarity=0.332  Sum_probs=42.1

Q ss_pred             CcceEEeeccchhhHhhhcc-----CCCCeEEEecCCCCCCcccccCeeEeeeHHHHHH
Q psy15576         49 IPELYIAVGISGAIQHLAGM-----KDSKTIVAINKDPEAPIFQVSDYGLVADLFKAVP  102 (108)
Q Consensus        49 ~P~lYia~GISGA~QH~~Gm-----~~s~~IIAIN~Dp~ApIf~~ADygiVgD~~evlp  102 (108)
                      +.+|+|.+|.|+.+.=.+++     +.-..+|.||.+|..---..+|+.+.+|+.|+++
T Consensus       216 ~aDllLviGTSl~V~Paa~l~~~a~~~g~~~v~IN~~~t~~~~~~~d~~i~g~a~~vl~  274 (290)
T 3u31_A          216 KCDLLLVIGTSSTVSTATNLCHFACKKKKKIVEINISKTYITNKMSDYHVCAKFSELTK  274 (290)
T ss_dssp             HCSEEEEESCCSCSHHHHHHHHHHHHTTCCEEEEESSCCTTTTTTCSEEEESCGGGHHH
T ss_pred             cCCEEEEECcCCcchhHHHHHHHHHHcCCEEEEECCCCCCCCCccceEEEECCHHHHHH
Confidence            56899999999998877766     2334688899998542234689999999999876

>3lq1_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- 1-carboxylate synthase; menaquinone biosynthesis, sephchc synthase, structural genomics; 2.60A {Listeria monocytogenes}

Probab=84.86  E-value=2.6  Score=34.75  Aligned_cols=58  Identities=10%  Similarity=0.100  Sum_probs=40.5

Q ss_pred             CcceEEeeccc---hhh-HhhhccCCCCeEEEecCCCCCC-cccccCeeEeeeHHHHHHHHHhh
Q psy15576         49 IPELYIAVGIS---GAI-QHLAGMKDSKTIVAINKDPEAP-IFQVSDYGLVADLFKAVPELTEK  107 (108)
Q Consensus        49 ~P~lYia~GIS---GA~-QH~~Gm~~s~~IIAIN~Dp~Ap-If~~ADygiVgD~~evlp~Li~~  107 (108)
                      .++|.|.+|-.   ... ++..-.. ...+|-|+.|+.-. -+..+|+.+++|+.+++++|+++
T Consensus       289 ~aDlvl~~G~~~~~~~~~~~~~~~~-~~~~i~id~d~~~~~~~~~~~~~i~~d~~~~l~~L~~~  351 (578)
T 3lq1_A          289 TPEVVIRFGSMPVSKPLKNWLEQLS-DIRFYVVDPGAAWKDPIKAVTDMIHCDERFLLDIMQQN  351 (578)
T ss_dssp             CCSEEEEESSCCSCHHHHHHHHHCC-SSEEEEECTTCCCCCTTCCCSEEECSCHHHHHHHHHHH
T ss_pred             CCCEEEEeCCcccchhHHHHHhcCC-CCEEEEECCCCCcCCCCcCceEEEEeCHHHHHHHHHhh
Confidence            68999999953   333 2332222 34688899998532 23457999999999999999874

>1ozh_A ALS, acetolactate synthase, catabolic; acetohydroxyacid synthase, thiamin diphosphate, lyase; HET: PGE HE3; 2.00A {Klebsiella pneumoniae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1ozg_A* 1ozf_A*

Probab=84.74  E-value=2.7  Score=34.58  Aligned_cols=57  Identities=21%  Similarity=0.265  Sum_probs=38.6

Q ss_pred             cceEEeecc---chhhHhhhccCCCCeEEEecCCCCCC-cccccCeeEeeeHHHHHHHHHhhC
Q psy15576         50 PELYIAVGI---SGAIQHLAGMKDSKTIVAINKDPEAP-IFQVSDYGLVADLFKAVPELTEKL  108 (108)
Q Consensus        50 P~lYia~GI---SGA~QH~~Gm~~s~~IIAIN~Dp~Ap-If~~ADygiVgD~~evlp~Li~~l  108 (108)
                      +++.|++|-   ++......  .....+|-|+.|+.-. =+..+|+.+++|+.+++++|.+++
T Consensus       275 aDlvl~lG~~~~~~~~~~~~--~~~~~~i~id~d~~~~~~~~~~~~~i~~d~~~~l~~L~~~l  335 (566)
T 1ozh_A          275 ADLVICIGYSPVEYEPAMWN--SGNATLVHIDVLPAYEERNYTPDVELVGDIAGTLNKLAQNI  335 (566)
T ss_dssp             CSEEEEESCCGGGSCGGGTC--CSCSEEEEEESSCCCCBTTBCCSEEEESCHHHHHHHHHHTC
T ss_pred             CCEEEEECCCCCcCCccccC--CCCCcEEEEeCCHHHhCCCCCCCEEEEeCHHHHHHHHHHhc
Confidence            588999985   33322111  2234688899887532 123479999999999999998653

>1q6z_A BFD, BFDC, benzoylformate decarboxylase; lyase, carbon-carbon, mandelate catabolism, T thiazolone diphosphate, inhibitor, high resolution; HET: TZD; 1.00A {Pseudomonas putida} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1po7_A* 1pi3_A* 3fsj_X* 1mcz_A* 1bfd_A* 2fwn_A* 3fzn_A* 2fn3_A* 2v3w_A* 1yno_A* 3f6b_X* 3f6e_X*

Probab=83.10  E-value=1.4  Score=35.66  Aligned_cols=20  Identities=20%  Similarity=0.140  Sum_probs=17.6

Q ss_pred             ccCeeEeeeHHHHHHHHHhh
Q psy15576         88 VSDYGLVADLFKAVPELTEK  107 (108)
Q Consensus        88 ~ADygiVgD~~evlp~Li~~  107 (108)
                      .+|+.+++|+.+++.+|.+.
T Consensus       309 ~~~~~i~~d~~~~l~~L~~~  328 (528)
T 1q6z_A          309 PMGDAIVADIGAMASALANL  328 (528)
T ss_dssp             SSSEEEESCHHHHHHHHHHH
T ss_pred             CCCeeEeCCHHHHHHHHHHH
Confidence            46899999999999999875

>2x7j_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene -1-carboxylate synthase; transferase, metal-binding; HET: TPP; 2.35A {Bacillus subtilis}

Probab=81.33  E-value=3.8  Score=33.94  Aligned_cols=60  Identities=18%  Similarity=0.113  Sum_probs=41.0

Q ss_pred             eCcceEEeeccc---hhh-HhhhccCCCCeEEEecCCCCCCc-ccccCeeEeeeHHHHHHHHHhhC
Q psy15576         48 LIPELYIAVGIS---GAI-QHLAGMKDSKTIVAINKDPEAPI-FQVSDYGLVADLFKAVPELTEKL  108 (108)
Q Consensus        48 V~P~lYia~GIS---GA~-QH~~Gm~~s~~IIAIN~Dp~ApI-f~~ADygiVgD~~evlp~Li~~l  108 (108)
                      +++++.|++|-.   ... ++.....+ ..+|-|+.|+.-.= +..+|+.+++|+.+++.+|++++
T Consensus       308 ~~~Dlvl~iG~~~~~~~~~~~~~~~~~-~~~i~id~d~~~~~~~~~~~~~i~~d~~~~l~~L~~~l  372 (604)
T 2x7j_A          308 LRPDVVIRFGPMPVSKPVFLWLKDDPT-IQQIVIDEDGGWRDPTQASAHMIHCNASVFAEEIMAGL  372 (604)
T ss_dssp             HCCSEEEEESSCCSCHHHHHHHHHCTT-SEEEEECTTCCCCCTTSCCSEEECSCHHHHHHHHHHTS
T ss_pred             cCCCEEEEECCcCccHHHHHHHhhCCC-CeEEEECCCCCccCCCccceEEEEcCHHHHHHHHHHhh
Confidence            468999999953   222 23332223 35788999985321 23479999999999999998753

>3eya_A Pyruvate dehydrogenase [cytochrome]; pyruvate oxidase, membrane-associated flavoprotein dehydrogenase, interactions with lipids cell membrane; HET: TDP FAD; 2.50A {Escherichia coli} PDB: 3ey9_A*

Probab=80.43  E-value=2.7  Score=34.32  Aligned_cols=58  Identities=17%  Similarity=0.189  Sum_probs=39.8

Q ss_pred             CcceEEeeccchhhHhhhccCCCCeEEEecCCCCCC-cccccCeeEeeeHHHHHHHHHhhC
Q psy15576         49 IPELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAP-IFQVSDYGLVADLFKAVPELTEKL  108 (108)
Q Consensus        49 ~P~lYia~GISGA~QH~~Gm~~s~~IIAIN~Dp~Ap-If~~ADygiVgD~~evlp~Li~~l  108 (108)
                      .++|.|++|..=.  ...-......+|-|+.|+.-. -....|+.+++|+.+++++|++++
T Consensus       265 ~aDlvl~iG~~~~--~~~~~~~~~~~i~id~d~~~~~~~~~~~~~i~~d~~~~l~~L~~~l  323 (549)
T 3eya_A          265 NADTLVLLGTQFP--YRAFYPTDAKIIQIDINPASIGAHSKVDMALVGDIKSTLRALLPLV  323 (549)
T ss_dssp             HCSEEEEESCCCC--CGGGSCSSSEEEEEESCGGGTTSSSCCSEEEECCHHHHHHHHGGGS
T ss_pred             hCCEEEEECCCCC--ccccCCCCCeEEEEeCCHHHhCCCCCCCeEEEeCHHHHHHHHHHhc
Confidence            5788899987522  111233345688898887642 123469999999999999998753

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	108
d1efva2	124	c.31.1.2 (A:208-331) C-terminal domain of the elec	3e-35
d3clsd2	123	c.31.1.2 (D:196-318) C-terminal domain of the elec	9e-34

>d1efva2 c.31.1.2 (A:208-331) C-terminal domain of the electron transfer flavoprotein alpha subunit {Human (Homo sapiens) [TaxId: 9606]} Length = 124

class: Alpha and beta proteins (a/b)
fold: DHS-like NAD/FAD-binding domain
superfamily: DHS-like NAD/FAD-binding domain
family: C-terminal domain of the electron transfer flavoprotein alpha subunit
domain: C-terminal domain of the electron transfer flavoprotein alpha subunit
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  114 bits (288), Expect = 3e-35
 Identities = 54/59 (91%), Positives = 57/59 (96%)

Query: 50  PELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVSDYGLVADLFKAVPELTEKL 108
           PELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQV+DYG+VADLFK VPE+TE L
Sbjct: 65  PELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVADYGIVADLFKVVPEMTEIL 123

>d3clsd2 c.31.1.2 (D:196-318) C-terminal domain of the electron transfer flavoprotein alpha subunit {Methylophilus methylotrophus [TaxId: 17]} Length = 123

class: Alpha and beta proteins (a/b)
fold: DHS-like NAD/FAD-binding domain
superfamily: DHS-like NAD/FAD-binding domain
family: C-terminal domain of the electron transfer flavoprotein alpha subunit
domain: C-terminal domain of the electron transfer flavoprotein alpha subunit
species: Methylophilus methylotrophus [TaxId: 17]

 Score =  111 bits (279), Expect = 9e-34
 Identities = 32/59 (54%), Positives = 44/59 (74%)

Query: 50  PELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVSDYGLVADLFKAVPELTEKL 108
            +LY+A+GISG+IQH+AGMK   TI+A+N DP A IF ++ YG+VAD+F    EL  +L
Sbjct: 65  CKLYVAMGISGSIQHMAGMKHVPTIIAVNTDPGASIFTIAKYGIVADIFDIEEELKAQL 123

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	108
d1efva2	124	C-terminal domain of the electron transfer flavopr	100.0
d3clsd2	123	C-terminal domain of the electron transfer flavopr	100.0
d1yc5a1	245	NAD-dependent deacetylase NpdA {Thermotoga maritim	97.09
d1q6za1	160	Benzoylformate decarboxylase {Pseudomonas putida [	96.88
d1s5pa_	235	NAD-dependent deacetylase CobB {Escherichia coli [	96.85
d1ma3a_	252	AF0112, Sir2 homolog (Sir2-AF2) {Archaeon Archaeog	96.78
d2b4ya1	267	NAD-dependent deacetylase sirtuin-5 {Human (Homo s	96.69
d1m2ka_	249	AF1676, Sir2 homolog (Sir2-AF1?) {Archaeon Archaeo	96.47
d1q1aa_	289	Hst2 {Baker's yeast (Saccharomyces cerevisiae) [Ta	96.12
d2ji7a1	175	Oxalyl-CoA decarboxylase {Oxalobacter formigenes [	95.84
d2ez9a1	183	Pyruvate oxidase {Lactobacillus plantarum [TaxId:	95.57
d1ozha1	179	Catabolic acetolactate synthase {Klebsiella pneumo	95.48
d1j8fa_	323	Sirt2 histone deacetylase {Human (Homo sapiens) [T	95.05
d1t9ba1	171	Acetohydroxyacid synthase catalytic subunit {Baker	94.83
d2djia1	177	Pyruvate oxidase {Aerococcus viridans [TaxId: 1377	94.4
d1ybha1	179	Acetohydroxyacid synthase catalytic subunit {Thale	94.06
d2ihta1	177	Carboxyethylarginine synthase {Streptomyces clavul	93.24

>d1efva2 c.31.1.2 (A:208-331) C-terminal domain of the electron transfer flavoprotein alpha subunit {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: DHS-like NAD/FAD-binding domain
superfamily: DHS-like NAD/FAD-binding domain
family: C-terminal domain of the electron transfer flavoprotein alpha subunit
domain: C-terminal domain of the electron transfer flavoprotein alpha subunit
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.7e-46  Score=269.25  Aligned_cols=101  Identities=56%  Similarity=0.787  Sum_probs=94.1

Q ss_pred             eecCCccccccccccccccccchhhhhhc------------cccceeeeccCeeeCcceEEeeccchhhHhhhccCCCCe
Q psy15576          6 RNSNHKVLQITQTYNSFSQPHYPKLLTVQ------------IAETYISALKASQLIPELYIAVGISGAIQHLAGMKDSKT   73 (108)
Q Consensus         6 ~~s~~r~~~~~~~~~~~~~pva~kL~a~~------------i~~~~igg~SGktV~P~lYia~GISGA~QH~~Gm~~s~~   73 (108)
                      =+|+|||+++.||| ++.+-+|++||+.-            ..++++| +||++|+|+||||||||||+||++||++|++
T Consensus        11 vV~~GrG~~~~e~~-~~~~~lA~~lga~vg~SR~~vd~gw~~~~~qIG-~SG~~V~P~lyia~GISGa~QH~~Gi~~s~~   88 (124)
T d1efva2          11 VVSGGRGLKSGENF-KLLYDLADQLHAAVGASRAAVDAGFVPNDMQVG-QTGKIVAPELYIAVGISGAIQHLAGMKDSKT   88 (124)
T ss_dssp             EEEECGGGCSTGGG-HHHHHHHHHHTCEEEECHHHHHTTSSCGGGBBS-TTSBCCCCSEEEEESCCCCHHHHTTTTTCSE
T ss_pred             EEECCCCcCCHHHH-HHHHHHHHHhCCeeeEeehhhhCCCcccceeec-ccceEeCCcEEEEecchhHHHHHhhccCCCE
Confidence            37999999999999 66699999999872            5666666 9999999999999999999999999999999


Q ss_pred             EEEecCCCCCCcccccCeeEeeeHHHHHHHHHhhC
Q psy15576         74 IVAINKDPEAPIFQVSDYGLVADLFKAVPELTEKL  108 (108)
Q Consensus        74 IIAIN~Dp~ApIf~~ADygiVgD~~evlp~Li~~l  108 (108)
                      |||||+||+||||++|||+||+|++||||+|+++|
T Consensus        89 IvAIN~D~~ApIf~~aD~giVgD~~evlp~L~e~l  123 (124)
T d1efva2          89 IVAINKDPEAPIFQVADYGIVADLFKVVPEMTEIL  123 (124)
T ss_dssp             EEEEESCTTCGGGGTCSEEEESCHHHHHHHHHHHT
T ss_pred             EEEEeCCCCCCccccCCEEEeccHHHHHHHHHHHh
Confidence            99999999999999999999999999999999976

>d3clsd2 c.31.1.2 (D:196-318) C-terminal domain of the electron transfer flavoprotein alpha subunit {Methylophilus methylotrophus [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: DHS-like NAD/FAD-binding domain
superfamily: DHS-like NAD/FAD-binding domain
family: C-terminal domain of the electron transfer flavoprotein alpha subunit
domain: C-terminal domain of the electron transfer flavoprotein alpha subunit
species: Methylophilus methylotrophus [TaxId: 17]

Probab=100.00  E-value=5.6e-46  Score=268.12  Aligned_cols=101  Identities=33%  Similarity=0.458  Sum_probs=93.8

Q ss_pred             eecCCccccccccccccccccchhhhhhc------------cccceeeeccCeee-CcceEEeeccchhhHhhhccCCCC
Q psy15576          6 RNSNHKVLQITQTYNSFSQPHYPKLLTVQ------------IAETYISALKASQL-IPELYIAVGISGAIQHLAGMKDSK   72 (108)
Q Consensus         6 ~~s~~r~~~~~~~~~~~~~pva~kL~a~~------------i~~~~igg~SGktV-~P~lYia~GISGA~QH~~Gm~~s~   72 (108)
                      =+|+|||+++.|+| ++.+.+|++||+.-            ..++++| +||++| +|+||||||||||+||++||++|+
T Consensus        10 VV~~GrG~~~~e~~-~~~~eLA~~lga~vg~SRp~vd~gw~~~~~qIG-~sG~~v~~P~lYia~GISGa~QH~~Gm~~s~   87 (123)
T d3clsd2          10 IMSIGRGIGEETNV-EQFRELADEAGATLCCSCPIADAGWLPKSRQVG-QSGKVVGSCKLYVAMGISGSIQHMAGMKHVP   87 (123)
T ss_dssp             EEEECGGGCSGGGH-HHHHHHHHHHTCEEEECHHHHHTTSSCGGGBBS-SSSBCCTTCSEEEEESCCCCHHHHHHHTTCS
T ss_pred             EEECCCCCCCHHHH-HHHHHHHHHhhcceeeccHHHHcCCCChhheEe-cCCccccCCcEEEEEcccchHHHHHhccCCC
Confidence            37999999999999 56699999999872            5666666 999999 799999999999999999999999


Q ss_pred             eEEEecCCCCCCcccccCeeEeeeHHHHHHHHHhhC
Q psy15576         73 TIVAINKDPEAPIFQVSDYGLVADLFKAVPELTEKL  108 (108)
Q Consensus        73 ~IIAIN~Dp~ApIf~~ADygiVgD~~evlp~Li~~l  108 (108)
                      +|||||+||+||||++|||+||+|++||+|+|+++|
T Consensus        88 ~IVAIN~D~~ApIf~~adygiVgD~~evlp~L~~~l  123 (123)
T d3clsd2          88 TIIAVNTDPGASIFTIAKYGIVADIFDIEEELKAQL  123 (123)
T ss_dssp             EEEEECSCTTCGGGGTCSEEECSCHHHHHHHHHHHC
T ss_pred             EEEEEcCCCCCCchhhCCEEEEeeHHHHHHHHHhhC
Confidence            999999999999999999999999999999999986

>d1yc5a1 c.31.1.5 (A:1-245) NAD-dependent deacetylase NpdA {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: DHS-like NAD/FAD-binding domain
superfamily: DHS-like NAD/FAD-binding domain
family: Sir2 family of transcriptional regulators
domain: NAD-dependent deacetylase NpdA
species: Thermotoga maritima [TaxId: 2336]

Probab=97.09  E-value=0.00013  Score=53.42  Aligned_cols=59  Identities=17%  Similarity=0.218  Sum_probs=48.3

Q ss_pred             CcceEEeeccchhhHhhhcc-----CCCCeEEEecCCCCCCcccccCeeEeeeHHHHHHHHHhhC
Q psy15576         49 IPELYIAVGISGAIQHLAGM-----KDSKTIVAINKDPEAPIFQVSDYGLVADLFKAVPELTEKL  108 (108)
Q Consensus        49 ~P~lYia~GISGA~QH~~Gm-----~~s~~IIAIN~Dp~ApIf~~ADygiVgD~~evlp~Li~~l  108 (108)
                      +.++.|.+|-|.++.-.+++     +....+|.||.+|. |.-+.||+.+-+|+.|+||.|++.|
T Consensus       180 ~~DlllviGTSl~V~p~~~l~~~a~~~g~~~i~IN~~~t-~~d~~~d~~i~g~~~e~l~~l~~~l  243 (245)
T d1yc5a1         180 RASLMIVLGSSLVVYPAAELPLITVRSGGKLVIVNLGET-PFDDIATLKYNMDVVEFARRVMEEG  243 (245)
T ss_dssp             HCSEEEEESCCSCEETGGGHHHHHHHHTCEEEEECSSCC-TTGGGCSEEECSCHHHHHHHHHHHH
T ss_pred             cCCEEEEECCCeEEechhhhhHHHHHcCCeEEEECCCCC-CCCcceeEEEeCCHHHHHHHHHHHc
Confidence            45788999999988776664     23345788999985 7789999999999999999999864

>d1q6za1 c.31.1.3 (A:182-341) Benzoylformate decarboxylase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: DHS-like NAD/FAD-binding domain
superfamily: DHS-like NAD/FAD-binding domain
family: Pyruvate oxidase and decarboxylase, middle domain
domain: Benzoylformate decarboxylase
species: Pseudomonas putida [TaxId: 303]

Probab=96.88  E-value=0.00056  Score=45.87  Aligned_cols=94  Identities=11%  Similarity=0.050  Sum_probs=51.1

Q ss_pred             CccccccccccccccccchhhhhhccccceeeeccCeeeC------------------------cceEEeeccchhhHhh
Q psy15576         10 HKVLQITQTYNSFSQPHYPKLLTVQIAETYISALKASQLI------------------------PELYIAVGISGAIQHL   65 (108)
Q Consensus        10 ~r~~~~~~~~~~~~~pva~kL~a~~i~~~~igg~SGktV~------------------------P~lYia~GISGA~QH~   65 (108)
                      |.++...+.+.++ .=+|+||++....+++-    ++.+-                        -+|.|++|..=.-+++
T Consensus        27 G~g~~~~~~~~~l-~~lae~l~~pv~~t~~~----~~~~~~~~~p~~~G~~~~~~~~~~~~l~~aDlil~lG~~l~~~~~  101 (160)
T d1q6za1          27 GPDVDAANANADC-VMLAERLKAPVWVAPSA----PRCPFPTRHPCFRGLMPAGIAAISQLLEGHDVVLVIGAPVFRYHQ  101 (160)
T ss_dssp             CHHHHHTTCHHHH-HHHHHHHTCCEEECSSC----SBCCSCTTSTTEEEECCSCHHHHHHHHTTCSEEEEESSCTTCCCS
T ss_pred             CcCccccccchHH-HHHHHhcCceEEeeccc----ccccccccccccccccccCcHHHHHHHhcCCeEEEEecccccccc
Confidence            4555566666444 77899999854333321    22222                        2455555543222222


Q ss_pred             hcc----CCCCeEEEecCCCCCCcccccCeeEeeeHHHHHHHHHhhC
Q psy15576         66 AGM----KDSKTIVAINKDPEAPIFQVSDYGLVADLFKAVPELTEKL  108 (108)
Q Consensus        66 ~Gm----~~s~~IIAIN~Dp~ApIf~~ADygiVgD~~evlp~Li~~l  108 (108)
                      .+.    .....||-|+.|++.--....|+++++|+.++|++|++++
T Consensus       102 ~~~~~~~~~~~~ii~v~~d~~~~~~~~~~~~i~~D~~~~l~~L~~~l  148 (160)
T d1q6za1         102 YDPGQYLKPGTRLISVTCDPLEAARAPMGDAIVADIGAMASALANLV  148 (160)
T ss_dssp             CCCSCSSCTTCEEEEEESCHHHHHHCSSSEEEESCHHHHHHHHHHHS
T ss_pred             cccccccccCceEEEeeCCHHHhCCCCCCeeEEeCHHHHHHHHHHhc
Confidence            111    1122355555554332222468999999999999999864

>d1s5pa_ c.31.1.5 (A:) NAD-dependent deacetylase CobB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: DHS-like NAD/FAD-binding domain
superfamily: DHS-like NAD/FAD-binding domain
family: Sir2 family of transcriptional regulators
domain: NAD-dependent deacetylase CobB
species: Escherichia coli [TaxId: 562]

Probab=96.85  E-value=0.00041  Score=50.60  Aligned_cols=58  Identities=28%  Similarity=0.427  Sum_probs=44.1

Q ss_pred             cceEEeeccchhhHhhhcc-----CCCCeEEEecCCCCCCcccccCeeEeeeHHHHHHHHHhhC
Q psy15576         50 PELYIAVGISGAIQHLAGM-----KDSKTIVAINKDPEAPIFQVSDYGLVADLFKAVPELTEKL  108 (108)
Q Consensus        50 P~lYia~GISGA~QH~~Gm-----~~s~~IIAIN~Dp~ApIf~~ADygiVgD~~evlp~Li~~l  108 (108)
                      .++.|.+|-|+++.=.+.+     +.-..+|.||.+| .+.-+.||+.|.+|+.|+||+|.++|
T Consensus       168 aDlllviGTSl~V~pa~~l~~~a~~~g~~iiiIN~~~-t~~~~~~~~~i~g~a~e~l~~l~~~l  230 (235)
T d1s5pa_         168 ADIFIAIGTSGHVYPAAGFVHEAKLHGAHTVELNLEP-SQVGNEFAEKYYGPASQVVPEFVEKL  230 (235)
T ss_dssp             CSEEEEESCCTTEETGGGHHHHHHHTTCEEEEEESSS-CC---CCSEEEESCHHHHHHHHHHHH
T ss_pred             CCEEEEEccCCcccCHHHHHHHHHHcCCeEEEECCCC-CCCCCcccEEEeCCHHHHHHHHHHHH
Confidence            5789999999988644443     2334688899997 47788999999999999999998764

>d1ma3a_ c.31.1.5 (A:) AF0112, Sir2 homolog (Sir2-AF2) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: DHS-like NAD/FAD-binding domain
superfamily: DHS-like NAD/FAD-binding domain
family: Sir2 family of transcriptional regulators
domain: AF0112, Sir2 homolog (Sir2-AF2)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=96.78  E-value=0.00049  Score=49.68  Aligned_cols=57  Identities=16%  Similarity=0.326  Sum_probs=44.5

Q ss_pred             cceEEeeccchhhHhhhcc------CCCCeEEEecCCCCCCcccccCeeEeeeHHHHHHHHHhhC
Q psy15576         50 PELYIAVGISGAIQHLAGM------KDSKTIVAINKDPEAPIFQVSDYGLVADLFKAVPELTEKL  108 (108)
Q Consensus        50 P~lYia~GISGA~QH~~Gm------~~s~~IIAIN~Dp~ApIf~~ADygiVgD~~evlp~Li~~l  108 (108)
                      .++.|.+|-|+++.-...+      +++ .+|.||.+| .+.-+.+|+.+.+|+.|+||+|+++|
T Consensus       184 ~dl~LviGTSl~V~p~~~~~~~a~~~~~-~~i~IN~~~-~~~d~~~d~~i~g~~~evl~~l~~~l  246 (252)
T d1ma3a_         184 CDAFMVVGSSLVVYPAAELPYIAKKAGA-KMIIVNAEP-TMADPIFDVKIIGKAGEVLPKIVEEV  246 (252)
T ss_dssp             CSEEEEESCCSCEETGGGHHHHHHHHTC-EEEEEESSC-CTTGGGCSEEEESCHHHHHHHHHHHH
T ss_pred             CCeEEEecCCceeeechHHHHHHHHcCC-eEEEECCCC-CCCCCceeEEEECCHHHHHHHHHHHH
Confidence            4678888988877655553      344 466799998 46667899999999999999998764

>d2b4ya1 c.31.1.5 (A:36-302) NAD-dependent deacetylase sirtuin-5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: DHS-like NAD/FAD-binding domain
superfamily: DHS-like NAD/FAD-binding domain
family: Sir2 family of transcriptional regulators
domain: NAD-dependent deacetylase sirtuin-5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.69  E-value=0.00083  Score=49.36  Aligned_cols=56  Identities=16%  Similarity=0.212  Sum_probs=43.6

Q ss_pred             cceEEeeccchhhHhhhcc-----CCCCeEEEecCCCCCCcccccCeeEeeeHHHHHHHHHh
Q psy15576         50 PELYIAVGISGAIQHLAGM-----KDSKTIVAINKDPEAPIFQVSDYGLVADLFKAVPELTE  106 (108)
Q Consensus        50 P~lYia~GISGA~QH~~Gm-----~~s~~IIAIN~Dp~ApIf~~ADygiVgD~~evlp~Li~  106 (108)
                      .++.|.+|-|.++.-.+.+     +.-..||.||.+|. +.-+.+|+.|.||+.|+||+|+.
T Consensus       207 aDlllviGTSl~V~pa~~l~~~a~~~g~~vv~IN~~~t-~~d~~~d~~i~g~~~~vL~~l~a  267 (267)
T d2b4ya1         207 CDLCLVVGTSSVVYPAAMFAPQVAARGVPVAEFNTETT-PATNRFRFHFQGPCGTTLPEALA  267 (267)
T ss_dssp             CSEEEEESCCSCSTTGGGHHHHHHHTTCCEEEEESSCC-TTGGGSSEEEESCHHHHHHHHTC
T ss_pred             CCeEEEECCCCeecCHHHHHHHHHHcCCcEEEEeCCCC-CCCCccCEEEeCCHHHHHHHHhC
Confidence            4688999999888654444     22235777999974 66688999999999999999973

>d1m2ka_ c.31.1.5 (A:) AF1676, Sir2 homolog (Sir2-AF1?) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: DHS-like NAD/FAD-binding domain
superfamily: DHS-like NAD/FAD-binding domain
family: Sir2 family of transcriptional regulators
domain: AF1676, Sir2 homolog (Sir2-AF1?)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=96.47  E-value=0.0012  Score=48.02  Aligned_cols=59  Identities=25%  Similarity=0.443  Sum_probs=45.7

Q ss_pred             CcceEEeeccchhhHhhhcc-----CCCCeEEEecCCCCCCcccccCeeEeeeHHHHHHHHHhhC
Q psy15576         49 IPELYIAVGISGAIQHLAGM-----KDSKTIVAINKDPEAPIFQVSDYGLVADLFKAVPELTEKL  108 (108)
Q Consensus        49 ~P~lYia~GISGA~QH~~Gm-----~~s~~IIAIN~Dp~ApIf~~ADygiVgD~~evlp~Li~~l  108 (108)
                      +.++.|.+|-|+.+.=.+.+     +.-..+|-||.+| .|+-+.+|+.|-+|+.|+||+|++.|
T Consensus       177 ~~DlllviGTSl~V~pa~~l~~~a~~~g~~~i~IN~~~-t~~d~~~d~~i~g~a~e~L~~l~~~l  240 (249)
T d1m2ka_         177 RADVIIVAGTSAVVQPAASLPLIVKQRGGAIIEINPDE-TPLTPIADYSLRGKAGEVMDELVRHV  240 (249)
T ss_dssp             HCSEEEEESCCSCSTTGGGHHHHHHHTTCEEEEECSSC-CTTGGGCSEEECSCHHHHHHHHHHHH
T ss_pred             cCCEEEEECCCCeeeehhhHHHHHHHcCCeEEEECCCC-CCCCCcccEEEECCHHHHHHHHHHHH
Confidence            45889999999987654444     2223578899987 46778899999999999999998753

>d1q1aa_ c.31.1.5 (A:) Hst2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: DHS-like NAD/FAD-binding domain
superfamily: DHS-like NAD/FAD-binding domain
family: Sir2 family of transcriptional regulators
domain: Hst2
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.12  E-value=0.0022  Score=47.87  Aligned_cols=64  Identities=20%  Similarity=0.099  Sum_probs=44.8

Q ss_pred             CeeeCcceEEeeccchhhHhhhcc----CCCCeEEEecCCCCCC---cccccCeeEeeeHHHHHHHHHhhC
Q psy15576         45 ASQLIPELYIAVGISGAIQHLAGM----KDSKTIVAINKDPEAP---IFQVSDYGLVADLFKAVPELTEKL  108 (108)
Q Consensus        45 GktV~P~lYia~GISGA~QH~~Gm----~~s~~IIAIN~Dp~Ap---If~~ADygiVgD~~evlp~Li~~l  108 (108)
                      ...-+.+|.|.+|-|++++=.+.+    +....+|.||.++-.+   --..+|+.|-||+.+++|+|.++|
T Consensus       207 ~~~~~aDlllviGTSl~V~Pa~~l~~~a~~~~~~viIN~e~~~~~~~~~~~~Dl~I~g~~~~vl~~L~~~L  277 (289)
T d1q1aa_         207 GKHPQQPLVIVVGTSLAVYPFASLPEEIPRKVKRVLCNLETVGDFKANKRPTDLIVHQYSDEFAEQLVEEL  277 (289)
T ss_dssp             ---CCCCEEEEESCCCCEETTTHHHHHSCTTSEEEEESSSCCTHHHHSCCTTCEEECCCHHHHHHHHHHHH
T ss_pred             hhcccCCEEEEECCCceecCHHHHHHHHHcCCCEEEEeCCCCCCcccccCCcCEEEeCCHHHHHHHHHHHc
Confidence            455678899999999986432222    3333456699986532   356789999999999999998864

>d2ji7a1 c.31.1.3 (A:195-369) Oxalyl-CoA decarboxylase {Oxalobacter formigenes [TaxId: 847]}

class: Alpha and beta proteins (a/b)
fold: DHS-like NAD/FAD-binding domain
superfamily: DHS-like NAD/FAD-binding domain
family: Pyruvate oxidase and decarboxylase, middle domain
domain: Oxalyl-CoA decarboxylase
species: Oxalobacter formigenes [TaxId: 847]

Probab=95.84  E-value=0.012  Score=40.07  Aligned_cols=60  Identities=20%  Similarity=0.155  Sum_probs=42.5

Q ss_pred             CcceEEeeccchhhHhhhcc-----CCCCeEEEecCCCCC-CcccccCeeEeeeHHHHHHHHHhhC
Q psy15576         49 IPELYIAVGISGAIQHLAGM-----KDSKTIVAINKDPEA-PIFQVSDYGLVADLFKAVPELTEKL  108 (108)
Q Consensus        49 ~P~lYia~GISGA~QH~~Gm-----~~s~~IIAIN~Dp~A-pIf~~ADygiVgD~~evlp~Li~~l  108 (108)
                      ..+|.|++|-.=...++.|-     .+...||.||.||+. .-....|++|++|+.++|++|++.+
T Consensus        78 ~aDlii~vG~~~~~~~~~~~~~~~~~~~~kvI~Id~d~~~i~~~~~~~l~i~~D~~~~l~~L~~~l  143 (175)
T d2ji7a1          78 QCDVCVLIGARLNWLMQHGKGKTWGDELKKYVQIDIQANEMDSNQPIAAPVVGDIKSAVSLLRKAL  143 (175)
T ss_dssp             HCSEEEEESCCSSGGGGGGCSGGGTTSCCEEEEEESCGGGTTSSSCCSEEEESCHHHHHHHHHHHT
T ss_pred             cccceeeeeccCCcccccccccccCCccceEEEEeccchhhccccCcCceEEEcHHHHHHHHHHHh
Confidence            46899999965433333332     234468999999852 1234679999999999999999864

>d2ez9a1 c.31.1.3 (A:183-365) Pyruvate oxidase {Lactobacillus plantarum [TaxId: 1590]}

class: Alpha and beta proteins (a/b)
fold: DHS-like NAD/FAD-binding domain
superfamily: DHS-like NAD/FAD-binding domain
family: Pyruvate oxidase and decarboxylase, middle domain
domain: Pyruvate oxidase
species: Lactobacillus plantarum [TaxId: 1590]

Probab=95.57  E-value=0.012  Score=40.77  Aligned_cols=59  Identities=17%  Similarity=0.263  Sum_probs=42.1

Q ss_pred             cceEEeeccc-hhhHhhhccCCCCeEEEecCCCCCCc-ccccCeeEeeeHHHHHHHHHhhC
Q psy15576         50 PELYIAVGIS-GAIQHLAGMKDSKTIVAINKDPEAPI-FQVSDYGLVADLFKAVPELTEKL  108 (108)
Q Consensus        50 P~lYia~GIS-GA~QH~~Gm~~s~~IIAIN~Dp~ApI-f~~ADygiVgD~~evlp~Li~~l  108 (108)
                      .+|.|++|.. +-.+.-.-..+...||-||.||+..= .-.+|++|++|+.++|++|+++|
T Consensus        95 aDlil~vG~~l~~~~~~~~~~~~~~iI~Id~d~~~i~~~~~~~~~i~~D~~~~l~~L~~~l  155 (183)
T d2ez9a1          95 ADVVLFVGNNYPFAEVSKAFKNTRYFLQIDIDPAKLGKRHKTDIAVLADAQKTLAAILAQV  155 (183)
T ss_dssp             CSEEEEESCCCTTTTTTTTTTTCSEEEEEESCGGGTTSSSCCSEEEESCHHHHHHHHHHTC
T ss_pred             cCceEEeecccCcccceeecccccchheeeccHHHHhhcCCCCeEEEECHHHHHHHHHHHh
Confidence            4799999964 22222222455668999999986431 23579999999999999999865

>d1ozha1 c.31.1.3 (A:188-366) Catabolic acetolactate synthase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: DHS-like NAD/FAD-binding domain
superfamily: DHS-like NAD/FAD-binding domain
family: Pyruvate oxidase and decarboxylase, middle domain
domain: Catabolic acetolactate synthase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=95.48  E-value=0.024  Score=38.70  Aligned_cols=96  Identities=15%  Similarity=0.159  Sum_probs=60.4

Q ss_pred             Cccccccccccccccccchhhhhhc---------cc----cceeeeccCeee---------CcceEEeeccchhhHhhhc
Q psy15576         10 HKVLQITQTYNSFSQPHYPKLLTVQ---------IA----ETYISALKASQL---------IPELYIAVGISGAIQHLAG   67 (108)
Q Consensus        10 ~r~~~~~~~~~~~~~pva~kL~a~~---------i~----~~~igg~SGktV---------~P~lYia~GISGA~QH~~G   67 (108)
                      |+|....+.+.++ .=+|+|||+-.         ++    ..++| .-|..-         ..+|.|++|..=.--.+.+
T Consensus        28 G~g~~~~~a~~~l-~~lae~~giPv~tt~~~~g~~~~~~~~~~~G-~~g~~~~~~~~~~~~~aDlvl~vG~~~~~~~~~~  105 (179)
T d1ozha1          28 GLMASQPENSKAL-RRLLETSHIPVTSTYQAAGAVNQDNFSRFAG-RVGLFNNQAGDRLLQLADLVICIGYSPVEYEPAM  105 (179)
T ss_dssp             CGGGGSGGGHHHH-HHHHHHHCCCEEECGGGTTTCCTTTCTTEEE-ECSSBTTCHHHHHHHHCSEEEEESCCGGGSCGGG
T ss_pred             chhhChhhHHHHH-HHHHHhccceEEeeccccccccccccccccc-ccCccccHHHhhhhccccceEEEccccccccccc
Confidence            5566666666554 67788888652         32    23444 334211         3479999996533222233


Q ss_pred             cC-CCCeEEEecCCCCC--CcccccCeeEeeeHHHHHHHHHhhC
Q psy15576         68 MK-DSKTIVAINKDPEA--PIFQVSDYGLVADLFKAVPELTEKL  108 (108)
Q Consensus        68 m~-~s~~IIAIN~Dp~A--pIf~~ADygiVgD~~evlp~Li~~l  108 (108)
                      .. .-..||-|+.||.-  ..+ .+|++|++|+.++|++|++++
T Consensus       106 ~~~~~~kvI~id~d~~~i~~~~-~~d~~i~gD~~~~l~~L~~~l  148 (179)
T d1ozha1         106 WNSGNATLVHIDVLPAYEERNY-TPDVELVGDIAGTLNKLAQNI  148 (179)
T ss_dssp             TCCSCSEEEEEESSCCCCBTTB-CCSEEEESCHHHHHHHHHHTC
T ss_pred             cccccccEEEEecchhhcCCcc-CCCeEEEeCHHHHHHHHHHhh
Confidence            22 22368899999863  222 479999999999999999865

>d1j8fa_ c.31.1.5 (A:) Sirt2 histone deacetylase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: DHS-like NAD/FAD-binding domain
superfamily: DHS-like NAD/FAD-binding domain
family: Sir2 family of transcriptional regulators
domain: Sirt2 histone deacetylase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.05  E-value=0.013  Score=45.01  Aligned_cols=60  Identities=22%  Similarity=0.207  Sum_probs=46.2

Q ss_pred             CcceEEeeccchhhHhhhcc----CCCCeEEEecCCCCCCccc-------------------ccCeeEeeeHHHHHHHHH
Q psy15576         49 IPELYIAVGISGAIQHLAGM----KDSKTIVAINKDPEAPIFQ-------------------VSDYGLVADLFKAVPELT  105 (108)
Q Consensus        49 ~P~lYia~GISGA~QH~~Gm----~~s~~IIAIN~Dp~ApIf~-------------------~ADygiVgD~~evlp~Li  105 (108)
                      +++|.|.+|-|.+++=.+.+    +...-.|.||.|+-.+--.                   .-|+.+.||+.+++..|.
T Consensus       220 ~aDllIViGTSL~V~Paa~l~~~a~~~~~~v~IN~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~gdcd~~~~~l~  299 (323)
T d1j8fa_         220 KVDLLLVMGTSLQVQPFASLISKAPLSTPRLLINKEKAGQSDPFLGMIMGLGGGMDFDSKKAYRDVAWLGECDQGCLALA  299 (323)
T ss_dssp             SCSEEEEESSCSCSHHHHHHHTTSCTTCCEEEEESSCCCCCCHHHHHHHHHHTCCCSSSTTCCSEEEEESCHHHHHHHHH
T ss_pred             CCCEEEEECCCCeecCHHHHHHHHHcCCCEEEEECCCCCCCCccchhhccccccccccccCCcceEEEccCHHHHHHHHH
Confidence            57999999999998877775    2233345699998765322                   249999999999999998


Q ss_pred             hhC
Q psy15576        106 EKL  108 (108)
Q Consensus       106 ~~l  108 (108)
                      +.|
T Consensus       300 ~~l  302 (323)
T d1j8fa_         300 ELL  302 (323)
T ss_dssp             HHT
T ss_pred             HHc
Confidence            764

>d1t9ba1 c.31.1.3 (A:290-460) Acetohydroxyacid synthase catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: DHS-like NAD/FAD-binding domain
superfamily: DHS-like NAD/FAD-binding domain
family: Pyruvate oxidase and decarboxylase, middle domain
domain: Acetohydroxyacid synthase catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=94.83  E-value=0.023  Score=38.42  Aligned_cols=59  Identities=15%  Similarity=0.196  Sum_probs=44.3

Q ss_pred             cceEEeeccchhhHhhhcc------------CCCCeEEEecCCCCCC-cccccCeeEeeeHHHHHHHHHhhC
Q psy15576         50 PELYIAVGISGAIQHLAGM------------KDSKTIVAINKDPEAP-IFQVSDYGLVADLFKAVPELTEKL  108 (108)
Q Consensus        50 P~lYia~GISGA~QH~~Gm------------~~s~~IIAIN~Dp~Ap-If~~ADygiVgD~~evlp~Li~~l  108 (108)
                      +++.+++|..=..+.+.++            ..-..||-|+.||+-- =.-..|+.|++|+.+++.+|++++
T Consensus        78 ~Dlvl~~G~~l~~~~~~~~~~~~~~~~~~~~~~~~~iI~Id~d~~el~~~~~~d~~i~~D~~~~l~~L~~~l  149 (171)
T d1t9ba1          78 ADLIIAVGARFDDRVTGNISKFAPEARRAAAEGRGGIIHFEVSPKNINKVVQTQIAVEGDATTNLGKMMSKI  149 (171)
T ss_dssp             CSEEEEESCCCCTTTSCSGGGSSHHHHHHHHTTSCEEEEEESCGGGSSSSSCCSEEEESCHHHHHHHHHTTS
T ss_pred             ccceeecccccccccccccchhhhhhhhcccCCCceEEEEeCCccccCCcccCceeEEEcHHHHHHHHHHhc
Confidence            6899999987666655554            3345688899998632 112479999999999999999864

>d2djia1 c.31.1.3 (A:187-363) Pyruvate oxidase {Aerococcus viridans [TaxId: 1377]}

class: Alpha and beta proteins (a/b)
fold: DHS-like NAD/FAD-binding domain
superfamily: DHS-like NAD/FAD-binding domain
family: Pyruvate oxidase and decarboxylase, middle domain
domain: Pyruvate oxidase
species: Aerococcus viridans [TaxId: 1377]

Probab=94.40  E-value=0.042  Score=37.31  Aligned_cols=60  Identities=15%  Similarity=0.211  Sum_probs=42.2

Q ss_pred             CcceEEeeccc-hhhHhhhccCCCCeEEEecCCCCCC-cccccCeeEeeeHHHHHHHHHhhC
Q psy15576         49 IPELYIAVGIS-GAIQHLAGMKDSKTIVAINKDPEAP-IFQVSDYGLVADLFKAVPELTEKL  108 (108)
Q Consensus        49 ~P~lYia~GIS-GA~QH~~Gm~~s~~IIAIN~Dp~Ap-If~~ADygiVgD~~evlp~Li~~l  108 (108)
                      ..+|.|++|.. .-............+|-|+.||+.- -.-.+|++|+||+.++|.+|++++
T Consensus        85 ~aDlvi~lG~~~~~~~~~~~~~~~~kiI~Id~d~~~i~~~~~~d~~i~gD~~~~L~~L~~~l  146 (177)
T d2djia1          85 EADTVLFAGSNFPFSEVEGTFRNVDNFIQIDIDPAMLGKRHHADVAILGDAALAIDEILNKV  146 (177)
T ss_dssp             HCSEEEEESCCCTTTTTTTTTTTCSEEEEEESCGGGTTSSSCCSEEEESCHHHHHHHHHHHS
T ss_pred             ccCceEEeeccCCCccceeccccccchheEEecccccCCcccCceEEEeCHHHHHHHHHHhh
Confidence            34799999953 1122233455666899999998532 223469999999999999998864

>d1ybha1 c.31.1.3 (A:281-459) Acetohydroxyacid synthase catalytic subunit {Thale cress (Arabidopsis thaliana), chloroplast [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: DHS-like NAD/FAD-binding domain
superfamily: DHS-like NAD/FAD-binding domain
family: Pyruvate oxidase and decarboxylase, middle domain
domain: Acetohydroxyacid synthase catalytic subunit
species: Thale cress (Arabidopsis thaliana), chloroplast [TaxId: 3702]

Probab=94.06  E-value=0.068  Score=36.34  Aligned_cols=58  Identities=16%  Similarity=0.163  Sum_probs=42.5

Q ss_pred             cceEEeeccchhhHhhhc---cCCCCeEEEecCCCCCCc-ccccCeeEeeeHHHHHHHHHhh
Q psy15576         50 PELYIAVGISGAIQHLAG---MKDSKTIVAINKDPEAPI-FQVSDYGLVADLFKAVPELTEK  107 (108)
Q Consensus        50 P~lYia~GISGA~QH~~G---m~~s~~IIAIN~Dp~ApI-f~~ADygiVgD~~evlp~Li~~  107 (108)
                      .+|.|++|-.=..+-+.+   ...-..||-||.||+.-- ...+|++|++|+.++|.+|.+.
T Consensus        84 aDlil~lG~~l~~~~~~~~~~~~~~~kiI~Id~d~~~~~~~~~~~~~i~~D~~~~l~~L~~~  145 (179)
T d1ybha1          84 SDLLLAFGVRFDDRVTGKLEAFASRAKIVHIDIDSAEIGKNKTPHVSVCGDVKLALQGMNKV  145 (179)
T ss_dssp             CSEEEEESCCCCHHHHSSGGGTTTTSEEEEEESCTTTTTSSSCCSEEEESCHHHHHHHHHHH
T ss_pred             hhhhhhccccccccccccccccCCCCeEEEEeCcccccccccCCCceEEeccHHHHHHHHHH
Confidence            589999997655443333   234457999999997543 2357999999999999999864

>d2ihta1 c.31.1.3 (A:198-374) Carboxyethylarginine synthase {Streptomyces clavuligerus [TaxId: 1901]}

class: Alpha and beta proteins (a/b)
fold: DHS-like NAD/FAD-binding domain
superfamily: DHS-like NAD/FAD-binding domain
family: Pyruvate oxidase and decarboxylase, middle domain
domain: Carboxyethylarginine synthase
species: Streptomyces clavuligerus [TaxId: 1901]

Probab=93.24  E-value=0.11  Score=34.83  Aligned_cols=59  Identities=19%  Similarity=0.106  Sum_probs=41.5

Q ss_pred             cceEEeeccchhhHhh---hccCCCCeEEEecCCCCCCc-ccccCeeEeeeHHHHHHHHHhhC
Q psy15576         50 PELYIAVGISGAIQHL---AGMKDSKTIVAINKDPEAPI-FQVSDYGLVADLFKAVPELTEKL  108 (108)
Q Consensus        50 P~lYia~GISGA~QH~---~Gm~~s~~IIAIN~Dp~ApI-f~~ADygiVgD~~evlp~Li~~l  108 (108)
                      -+|.|++|..=...+.   .-......+|-||.||..-= .-.+|+.|++|+..++++|++++
T Consensus        91 aDlvl~vG~~~~~~~~~~~~~~~~~~k~I~Id~d~~~i~~~~~~~~~i~gD~~~~l~~L~~~l  153 (177)
T d2ihta1          91 VDLVLTVGYDYAEDLRPSMWQKGIEKKTVRISPTVNPIPRVYRPDVDVVTDVLAFVEHFETAT  153 (177)
T ss_dssp             CCEEEEETCCGGGCCCHHHHCCSSCCEEEEEESSCCSCTTTCCCSEEEESCHHHHHHHHHHHT
T ss_pred             CCceEEecccccccccccccccCCccceeEEcCCHHHhCCccCCCeEEEeCHHHHHHHHHHHh
Confidence            3899999976433222   22333446889999987521 22579999999999999998764