Psyllid ID: psy15689

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-----
Protein Sequence
MNDDYDDEQTHRWDQDMVDVDSDGGDDPMENPQEVLNECLEKFSTPDYIMEPGIFSQLKRYFQAGGNPEQVIELLSQNYKAVAQMANLVAEWLILGGVNVTEVQAMVENHLKDMILKTFDPKKADTIFTEEGETPAWLTEMIEHPTWRSLIYRLAEEYPDCLMLNFTIKLISDAGFQREITSISTAAQQIEVFSRVLKTSISNFLESSDDWQSSVEECAKMVCHGQHTYVYSQVLLQVLSLESKGGSKVKRLAQEITKCAQQSGHDVTPIIMALNGAAFYPQANQALSSMISRNS
Secondary Structure (PSIPRED)
cccccHHHcccccccccccccccccccccccHHHHHHHHHHHcccccccccHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHccHHHHHHHHHccccccHHHHHHHHcHHHHHHHHHHHHHccccHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHccccccHHHHHHccccccHHHHHHHHHHHcccc
Secondary Structure Prediction (SSPRO)
ccccccHHHccccccccccccccccccccccHHHHHHHHHHHHccccccccHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHccHHHHHHHHccccccHHHHHHHHHccHHHHHHHHHHHHccccHHHHHHHHHHHHcccHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHccccccHHHHHcccccccHHHHHHHHHHHHccc
Coil and Loop (DISEMBL)
mnddyddeqthrwdqdmvdvdsdggddpmenpQEVLNECLekfstpdyimepgiFSQLKRYFQAGGNPEQVIELLSQNYKAVAQMANLVAEWLILGGVNVTEVQAMVENHLKDMIlktfdpkkadtifteegetpaWLTEMIEHPTWRSLIYRLAeeypdclmLNFTIKLisdagfqreITSISTAAQQIEVFSRVLKTSISNFLESSDDWQSSVEECAKMVCHGQHTYVYSQVLLQVLSLESKGGSKVKRLAQEITKCAqqsghdvtPIIMAlngaafypqANQALSSMISRNS
Flexible Loop (DISEMBL)
mnddyddeqthrwdqdmvDVDSDGGDDPMENPQEVLNECLEKFSTPDYIMEPGIFSQLKRYFQAGGNPEQVIELLSQNYKAVAQMANLVAEWLILGGVNVTEVQAMVENHLKDMILKTFDPKKADTIFTEEGETPAWLTEMIEHPTWRSLIYRLAEEYPDCLMLNFTIKLISDAGFQREITSISTAAQQIEVFSRVLKTSISNFLESSDDWQSSVEECAKMVCHGQHTYVYSQVLLQVLSLESKGGSKVKRLAQEITKCAQQSGHDVTPIIMALNGAAFYPQANQALSSMISRNS
Low Complexity Region (SEG)
MNDDYDDEQTHRWdqdmvdvdsdggddPMENPQEVLNECLEKFSTPDYIMEPGIFSQLKRYFQAGGNPEQVIELLSQNYKAVAQMANLVAEWLILGGVNVTEVQAMVENHLKDMILKTFDPKKADTIFTEEGETPAWLTEMIEHPTWRSLIYRLAEEYPDCLMLNFTIKLISDAGFQREITSISTAAQQIEVFSRVLKTSISNFLESSDDWQSSVEECAKMVCHGQHTyvysqvllqvlslESKGGSKVKRLAQEITKCAQQSGHDVTPIIMALNGAAFYPQANQALSSMISRNS
Disordered region (IsUnstruct)
************************************NECLEKFSTPDYIMEPGIFSQLKRYFQAGGNPEQVIELLSQNYKAVAQMANLVAEWLILGGVNVTEVQAMVENHLKDMILKTFDPKKADTIFTEEGETPAWLTEMIEHPTWRSLIYRLAEEYPDCLMLNFTIKLISDAGFQREITSISTAAQQIEVFSRVLKTSISNFLESSDDWQSSVEECAKMVCHGQHTYVYSQVLLQVLSLESKGGSKVKRLAQEITKCAQQSGHDVTPIIMALNGAAFYP**************
Disordered Region (DISOPRED)
*****DD*******************************CLEKFSTPDYIMEPGIFSQLKRYFQAGGNPEQVIELLSQNYKAVAQMANLVAEWLILGGVNVTEVQAMVENHLKDMILKTFDPKKADTIFTEEGETPAWLTEMIEHPTWRSLIYRLAEEYPDCLMLNFTIKLISDAGFQREITSISTAAQQIEVFSRVLKTSISNFLESSDDWQSSVEECAKMVCHGQHTYVYSQVLLQVLSLESKGGSKVKRLAQ**************PIIMALNGAAFYPQANQALSSMISR**
Disordered Region (DISEMBL)
**********HRWDQDMVDVDSDGGDDPMENPQEVLNECLEKFSTPDYIMEPGIFSQLKRYFQAGGNPEQVIELLSQNYKAVAQMANLVAEWLILGGVNVTEVQAMVENHLKDMILKTFDPKKADTIFTEEGETPAWLTEMIEHPTWRSLIYRLAEEYPDCLMLNFTIKLISDAGFQREITSISTAAQQIEVFSRVLKTSISNFLESSDDWQSSVEECAKMVCHGQHTYVYSQVLLQVLSLESKGGSKVKRLAQEITKCAQQSGHDVTPIIMALNGAAFYPQANQAL********
Disordered Region (DISPRO)
*****************************ENPQEVLNECLEKFSTPDYIMEPGIFSQLKRYFQAGGNPEQVIELLSQNYKAVAQMANLVAEWLILGGVNVTEVQAMVENHLKDMILKTFDPKKADTIFTEEGETPAWLTEMIEHPTWRSLIYRLAEEYPDCLMLNFTIKLISDAGFQREITSISTAAQQIEVFSRVLKTSISNFLESSDDWQSSVEECAKMVCHGQHTYVYSQVLLQVLSLESKGGSKVKRLAQEITKCAQQSGHDVTPIIMALNGAAFYPQANQALSSMISR**
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MNDDYDDEQTHRWDQDMVDVDSDGGDDPMENPQEVLNECLEKFSTPDYIMEPGIFSQLKRYFQAGGNPEQVIELLSQNYKAVAQMANLVAEWLILGGVNVTEVQAMVENHLKDMILKTFDPKKADTIFTEEGETPAWLTEMIEHPTWRSLIYRLAEEYPDCLMLNFTIKLISDAGFQREITSISTAAQQIEVFSRVLKTSISNFLESSDDWQSSVEECAKMVCHGQHTYVYSQVLLQVLSLESKGGSKVKRLAQEITKCAQQSGHDVTPIIMALNGAAFYPQANQALSSMISRNS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	295	2.2.26 [Sep-21-2011]
Q24134	578	Negative elongation facto	yes	N/A	0.928	0.474	0.766	1e-125
Q922L6	591	Negative elongation facto	yes	N/A	0.932	0.465	0.602	3e-97
Q5RFA0	590	Negative elongation facto	yes	N/A	0.932	0.466	0.601	4e-97
Q8IXH7	590	Negative elongation facto	yes	N/A	0.932	0.466	0.601	4e-97
A5GFY4	590	Negative elongation facto	yes	N/A	0.932	0.466	0.601	7e-97

>sp|Q24134|NELFD_DROME Negative elongation factor D OS=Drosophila melanogaster GN=TH1 PE=1 SV=2

 Score =  447 bits (1149), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 213/278 (76%), Positives = 242/278 (87%), Gaps = 4/278 (1%)

Query: 22  SDGGDDPME----NPQEVLNECLEKFSTPDYIMEPGIFSQLKRYFQAGGNPEQVIELLSQ 77
           + G  +P E    NPQ+ + ECLEKF TPDYIMEPGIF+QLKRYFQ+GG+PE+VI +LS+
Sbjct: 14  AKGQTNPEETLEDNPQKTIQECLEKFLTPDYIMEPGIFTQLKRYFQSGGSPEEVISMLSE 73

Query: 78  NYKAVAQMANLVAEWLILGGVNVTEVQAMVENHLKDMILKTFDPKKADTIFTEEGETPAW 137
           NYKAVAQMANL+AEWLIL GV VTEVQAMVENHLK+MILK+FDPKKADTIFTEEGETP W
Sbjct: 74  NYKAVAQMANLLAEWLILAGVKVTEVQAMVENHLKEMILKSFDPKKADTIFTEEGETPDW 133

Query: 138 LTEMIEHPTWRSLIYRLAEEYPDCLMLNFTIKLISDAGFQREITSISTAAQQIEVFSRVL 197
           LTEMI+H TWRSLIYRLAEEYPDCLMLNFTIKLISDAGFQ EITSISTAAQQIEVFSRVL
Sbjct: 134 LTEMIDHYTWRSLIYRLAEEYPDCLMLNFTIKLISDAGFQSEITSISTAAQQIEVFSRVL 193

Query: 198 KTSISNFLESSDDWQSSVEECAKMVCHGQHTYVYSQVLLQVLSLESKGGSKVKRLAQEIT 257
           KTSI  FL + DD   +++ECA+MVCHGQHTYVYSQVL+QVLS E KGG  +KRL+QEI 
Sbjct: 194 KTSIVKFLNNPDDVHGAIQECARMVCHGQHTYVYSQVLIQVLSQEQKGGFNMKRLSQEII 253

Query: 258 KCAQQSGHDVTPIIMALNGAAFYPQANQALSSMISRNS 295
           K A Q+  +VTPI MALNG+A YPQA QAL+SM++RN+
Sbjct: 254 KYALQNNQNVTPITMALNGSAVYPQACQALTSMLTRNT 291

Essential component of the NELF complex, a complex that negatively regulates the elongation of transcription by RNA polymerase II by RNA polymerase II. The NELF complex, which acts via an association with the DSIF complex, causes transcriptional pausing.
Drosophila melanogaster (taxid: 7227)

>sp|Q922L6|NELFD_MOUSE Negative elongation factor D OS=Mus musculus GN=Th1l PE=2 SV=2

 Score =  355 bits (910), Expect = 3e-97,   Method: Compositional matrix adjust.
 Identities = 170/282 (60%), Positives = 219/282 (77%), Gaps = 7/282 (2%)

Query: 21  DSDGG----DDPME--NPQEVLNECLEKFSTPDYIMEPGIFSQLKRYFQAGGNPEQVIEL 74
           ++DGG    DD  E  +  EV  ECL KFST DYIMEP IF+ LKRYFQAGG+PE VI+L
Sbjct: 24  EADGGQHQEDDSGEGEDDAEVQQECLHKFSTRDYIMEPSIFNTLKRYFQAGGSPENVIQL 83

Query: 75  LSQNYKAVAQMANLVAEWLILGGVNVTEVQAMVENHLKDMILKTFDPKKADTIFTEEGET 134
           LS+NY AVAQ  NL+AEWLI  GV   +VQ  VENHLK +++K FDP+KAD+IFTEEGET
Sbjct: 84  LSENYTAVAQTVNLLAEWLIQTGVEPVQVQETVENHLKSLLIKHFDPRKADSIFTEEGET 143

Query: 135 PAWLTEMIEHPTWRSLIYRLAEEYPDCLMLNFTIKLISDAGFQREITSISTAAQQIEVFS 194
           PAWL +MI H TWR L Y+LAE +PDCLMLNFT+KLISDAG+Q EITS+STA QQ+EVFS
Sbjct: 144 PAWLEQMIAHTTWRDLFYKLAEAHPDCLMLNFTVKLISDAGYQGEITSVSTACQQLEVFS 203

Query: 195 RVLKTSISNFLESS-DDWQSSVEECAKMVCHGQHTYVYSQVLLQVLSLESKGGSKVKRLA 253
           RVL+TS++  L+   ++ + ++ E AKMVCHG+HTY+++Q ++ VL+ E +GGS V+R+A
Sbjct: 204 RVLRTSLATILDGGEENLEKNLPEFAKMVCHGEHTYLFAQAMMSVLAQEEQGGSAVRRVA 263

Query: 254 QEITKCAQQSGHDVTPIIMALNGAAFYPQANQALSSMISRNS 295
           QE+ + AQ+ GHD + I +AL  AA YP+A QAL +M+SR +
Sbjct: 264 QEVQRFAQEKGHDASQITLALGTAASYPRACQALGAMLSRGA 305

Essential component of the NELF complex, a complex that negatively regulates the elongation of transcription by RNA polymerase II. The NELF complex, which acts via an association with the DSIF complex and causes transcriptional pausing, is counteracted by the P-TEFb kinase complex.

Mus musculus (taxid: 10090)

>sp|Q5RFA0|NELFD_PONAB Negative elongation factor D OS=Pongo abelii GN=TH1L PE=2 SV=1

 Score =  354 bits (909), Expect = 4e-97,   Method: Compositional matrix adjust.
 Identities = 169/281 (60%), Positives = 219/281 (77%), Gaps = 6/281 (2%)

Query: 21  DSDGG---DDPME--NPQEVLNECLEKFSTPDYIMEPGIFSQLKRYFQAGGNPEQVIELL 75
           ++DGG   DD  E  +  EV  ECL KFST DYIMEP IF+ LKRYFQAGG+PE VI+LL
Sbjct: 24  EADGGQQEDDSGEGEDDAEVQQECLHKFSTRDYIMEPSIFNTLKRYFQAGGSPENVIQLL 83

Query: 76  SQNYKAVAQMANLVAEWLILGGVNVTEVQAMVENHLKDMILKTFDPKKADTIFTEEGETP 135
           S+NY AVAQ  NL+AEWLI  GV   +VQ  VENHLK +++K FDP+KAD+IFTEEGETP
Sbjct: 84  SENYTAVAQTVNLLAEWLIQTGVEPVQVQETVENHLKSLLIKHFDPRKADSIFTEEGETP 143

Query: 136 AWLTEMIEHPTWRSLIYRLAEEYPDCLMLNFTIKLISDAGFQREITSISTAAQQIEVFSR 195
           AWL +MI H TWR L Y+LAE +PDCLMLNFT+KLISDAG+Q EITS+STA QQ+EVFSR
Sbjct: 144 AWLEQMIAHTTWRDLFYKLAEAHPDCLMLNFTVKLISDAGYQGEITSVSTACQQLEVFSR 203

Query: 196 VLKTSISNFLESS-DDWQSSVEECAKMVCHGQHTYVYSQVLLQVLSLESKGGSKVKRLAQ 254
           VL+TS++  L+   ++ + ++ E AKMVCHG+HTY+++Q ++ VL+ E +GGS V+R+AQ
Sbjct: 204 VLRTSLATILDGGEENLEKNLPEFAKMVCHGEHTYLFAQAMMSVLAQEEQGGSAVRRIAQ 263

Query: 255 EITKCAQQSGHDVTPIIMALNGAAFYPQANQALSSMISRNS 295
           E+ + AQ+ GHD + I +AL  AA YP+A QAL +M+S+ +
Sbjct: 264 EVQRFAQEKGHDASQITLALGTAASYPRACQALGAMLSKGA 304

Essential component of the NELF complex, a complex that negatively regulates the elongation of transcription by RNA polymerase II. The NELF complex, which acts via an association with the DSIF complex and causes transcriptional pausing, is counteracted by the P-TEFb kinase complex.

Pongo abelii (taxid: 9601)

>sp|Q8IXH7|NELFD_HUMAN Negative elongation factor C/D OS=Homo sapiens GN=TH1L PE=1 SV=2

 Score =  354 bits (909), Expect = 4e-97,   Method: Compositional matrix adjust.
 Identities = 169/281 (60%), Positives = 219/281 (77%), Gaps = 6/281 (2%)

Query: 21  DSDGG---DDPME--NPQEVLNECLEKFSTPDYIMEPGIFSQLKRYFQAGGNPEQVIELL 75
           ++DGG   DD  E  +  EV  ECL KFST DYIMEP IF+ LKRYFQAGG+PE VI+LL
Sbjct: 24  EADGGQQEDDSGEGEDDAEVQQECLHKFSTRDYIMEPSIFNTLKRYFQAGGSPENVIQLL 83

Query: 76  SQNYKAVAQMANLVAEWLILGGVNVTEVQAMVENHLKDMILKTFDPKKADTIFTEEGETP 135
           S+NY AVAQ  NL+AEWLI  GV   +VQ  VENHLK +++K FDP+KAD+IFTEEGETP
Sbjct: 84  SENYTAVAQTVNLLAEWLIQTGVEPVQVQETVENHLKSLLIKHFDPRKADSIFTEEGETP 143

Query: 136 AWLTEMIEHPTWRSLIYRLAEEYPDCLMLNFTIKLISDAGFQREITSISTAAQQIEVFSR 195
           AWL +MI H TWR L Y+LAE +PDCLMLNFT+KLISDAG+Q EITS+STA QQ+EVFSR
Sbjct: 144 AWLEQMIAHTTWRDLFYKLAEAHPDCLMLNFTVKLISDAGYQGEITSVSTACQQLEVFSR 203

Query: 196 VLKTSISNFLESS-DDWQSSVEECAKMVCHGQHTYVYSQVLLQVLSLESKGGSKVKRLAQ 254
           VL+TS++  L+   ++ + ++ E AKMVCHG+HTY+++Q ++ VL+ E +GGS V+R+AQ
Sbjct: 204 VLRTSLATILDGGEENLEKNLPEFAKMVCHGEHTYLFAQAMMSVLAQEEQGGSAVRRIAQ 263

Query: 255 EITKCAQQSGHDVTPIIMALNGAAFYPQANQALSSMISRNS 295
           E+ + AQ+ GHD + I +AL  AA YP+A QAL +M+S+ +
Sbjct: 264 EVQRFAQEKGHDASQITLALGTAASYPRACQALGAMLSKGA 304

Essential component of the NELF complex, a complex that negatively regulates the elongation of transcription by RNA polymerase II. The NELF complex, which acts via an association with the DSIF complex and causes transcriptional pausing, is counteracted by the P-TEFb kinase complex.

Homo sapiens (taxid: 9606)

>sp|A5GFY4|NELFD_PIG Negative elongation factor D OS=Sus scrofa GN=TH1L PE=2 SV=1

 Score =  353 bits (906), Expect = 7e-97,   Method: Compositional matrix adjust.
 Identities = 169/281 (60%), Positives = 218/281 (77%), Gaps = 6/281 (2%)

Query: 21  DSDGG---DD--PMENPQEVLNECLEKFSTPDYIMEPGIFSQLKRYFQAGGNPEQVIELL 75
           ++DGG   DD    E+  EV  ECL KFST DYIMEP IF+ LKRYFQAGG+PE VI+LL
Sbjct: 24  EADGGQQEDDYGEGEDDAEVQQECLHKFSTRDYIMEPSIFNTLKRYFQAGGSPENVIQLL 83

Query: 76  SQNYKAVAQMANLVAEWLILGGVNVTEVQAMVENHLKDMILKTFDPKKADTIFTEEGETP 135
           S+NY AVAQ  NL+AEWLI  GV   +VQ  VENHLK +++K FDP+KAD+IFTEEGETP
Sbjct: 84  SENYTAVAQTVNLLAEWLIQTGVEPVQVQETVENHLKSLLIKHFDPRKADSIFTEEGETP 143

Query: 136 AWLTEMIEHPTWRSLIYRLAEEYPDCLMLNFTIKLISDAGFQREITSISTAAQQIEVFSR 195
           AWL +MI H TWR L Y+LAE +PDCLMLNFT+KLISDAG+Q EITS+STA QQ+EVFSR
Sbjct: 144 AWLEQMIAHTTWRDLFYKLAEAHPDCLMLNFTVKLISDAGYQGEITSVSTACQQLEVFSR 203

Query: 196 VLKTSISNFLESS-DDWQSSVEECAKMVCHGQHTYVYSQVLLQVLSLESKGGSKVKRLAQ 254
           VL+TS++  L+   ++ +  + E AKMVCHG+HTY+++Q ++ VL+ E +GGS V+R+AQ
Sbjct: 204 VLRTSLATILDGGEENLEKHLPEFAKMVCHGEHTYLFAQAMMSVLAQEEQGGSAVRRVAQ 263

Query: 255 EITKCAQQSGHDVTPIIMALNGAAFYPQANQALSSMISRNS 295
           E+ + AQ+ GHD + I +AL  AA YP+A QAL +M+S+ +
Sbjct: 264 EVQRFAQEKGHDASQITLALGTAASYPRACQALGAMLSKGA 304

Essential component of the NELF complex, a complex that negatively regulates the elongation of transcription by RNA polymerase II. The NELF complex, which acts via an association with the DSIF complex and causes transcriptional pausing, is counteracted by the P-TEFb kinase complex.

Sus scrofa (taxid: 9823)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	295
307184650	579	Negative elongation factor D [Camponotus	0.996	0.507	0.789	1e-136
380011013	580	PREDICTED: negative elongation factor D-	0.996	0.506	0.779	1e-136
242022458	580	Negative elongation factor D, putative [	0.905	0.460	0.861	1e-136
340722089	580	PREDICTED: LOW QUALITY PROTEIN: negative	0.996	0.506	0.779	1e-136
350420164	580	PREDICTED: negative elongation factor D-	0.996	0.506	0.779	1e-136
307208263	582	Negative elongation factor D [Harpegnath	0.989	0.501	0.791	1e-135
91078898	578	PREDICTED: similar to TH1 CG9984-PA [Tri	0.986	0.503	0.783	1e-135
322786011	329	hypothetical protein SINV_15376 [Solenop	1.0	0.896	0.779	1e-135
332021804	587	Negative elongation factor D [Acromyrmex	1.0	0.502	0.783	1e-134
193211439	580	negative elongation factor D [Nasonia vi	0.993	0.505	0.779	1e-133

>gi|307184650|gb|EFN70979.1| Negative elongation factor D [Camponotus floridanus]

 Score =  491 bits (1265), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 233/295 (78%), Positives = 264/295 (89%), Gaps = 1/295 (0%)

Query: 1   MNDDYDDEQTHRWDQDMVDVDSDGGDDPMENPQEVLNECLEKFSTPDYIMEPGIFSQLKR 60
           M  DYD++++  W  +M   D   G+D  +NPQEVLNECL+KF TPDYIMEPGIF+QLKR
Sbjct: 1   MESDYDEDRSG-WGDEMNRSDDCSGEDTFDNPQEVLNECLDKFKTPDYIMEPGIFAQLKR 59

Query: 61  YFQAGGNPEQVIELLSQNYKAVAQMANLVAEWLILGGVNVTEVQAMVENHLKDMILKTFD 120
           YFQAGGNPEQVIELLS+NY A AQMANL+AEWLIL GV VT+VQAMVEN+LKDMILKTFD
Sbjct: 60  YFQAGGNPEQVIELLSKNYTACAQMANLLAEWLILAGVKVTDVQAMVENNLKDMILKTFD 119

Query: 121 PKKADTIFTEEGETPAWLTEMIEHPTWRSLIYRLAEEYPDCLMLNFTIKLISDAGFQREI 180
           PKKAD IFTEEGETPAWLTEMI+HPTWRSLIYRLAEEYPDCLMLNFTIKLISDAGFQ EI
Sbjct: 120 PKKADKIFTEEGETPAWLTEMIQHPTWRSLIYRLAEEYPDCLMLNFTIKLISDAGFQGEI 179

Query: 181 TSISTAAQQIEVFSRVLKTSISNFLESSDDWQSSVEECAKMVCHGQHTYVYSQVLLQVLS 240
           TSISTAAQQIEVFSRVLKT+I+ FLE++++WQSS++ECAKMVCHGQHTYVYSQVLLQ+L+
Sbjct: 180 TSISTAAQQIEVFSRVLKTAIAGFLENTENWQSSIQECAKMVCHGQHTYVYSQVLLQILA 239

Query: 241 LESKGGSKVKRLAQEITKCAQQSGHDVTPIIMALNGAAFYPQANQALSSMISRNS 295
            ES+GG  +KRL+QEITKCAQQ+ HDVTPI MALNGAA  P A QAL+SM+SRN+
Sbjct: 240 QESRGGFMMKRLSQEITKCAQQNRHDVTPITMALNGAASSPGACQALASMLSRNT 294

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380011013|ref|XP_003689608.1| PREDICTED: negative elongation factor D-like [Apis florea]

 Score =  490 bits (1261), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 230/295 (77%), Positives = 264/295 (89%), Gaps = 1/295 (0%)

Query: 1   MNDDYDDEQTHRWDQDMVDVDSDGGDDPMENPQEVLNECLEKFSTPDYIMEPGIFSQLKR 60
           M  DYD+++   W ++M   +   G+D  +NPQE+LNECL+KF TPDYIMEPGIF+QLKR
Sbjct: 1   MESDYDEDRG-TWTEEMTRTEDCSGEDNFDNPQEILNECLDKFKTPDYIMEPGIFAQLKR 59

Query: 61  YFQAGGNPEQVIELLSQNYKAVAQMANLVAEWLILGGVNVTEVQAMVENHLKDMILKTFD 120
           YFQAGGNPEQVIELLS+NY A AQMANL+AEWLIL GV VT+VQAMVEN+LKDMILKTFD
Sbjct: 60  YFQAGGNPEQVIELLSKNYTACAQMANLLAEWLILAGVKVTDVQAMVENNLKDMILKTFD 119

Query: 121 PKKADTIFTEEGETPAWLTEMIEHPTWRSLIYRLAEEYPDCLMLNFTIKLISDAGFQREI 180
           PKKAD IFTEEGETPAWLTEMI+HPTWRSLIYRLAEEYPDCLMLNFTIKLISDAGFQ EI
Sbjct: 120 PKKADKIFTEEGETPAWLTEMIQHPTWRSLIYRLAEEYPDCLMLNFTIKLISDAGFQGEI 179

Query: 181 TSISTAAQQIEVFSRVLKTSISNFLESSDDWQSSVEECAKMVCHGQHTYVYSQVLLQVLS 240
           TSISTAAQQIEVFSRVLKT+I+ FL++++DWQSS++ECAKMVCHGQHTYVYSQVLLQ+L+
Sbjct: 180 TSISTAAQQIEVFSRVLKTAIAGFLQNTEDWQSSIQECAKMVCHGQHTYVYSQVLLQILA 239

Query: 241 LESKGGSKVKRLAQEITKCAQQSGHDVTPIIMALNGAAFYPQANQALSSMISRNS 295
            ES+GG  +KRL+QEITKCAQQ+ HDVTPI MALNGA+  P A QAL+SM+SRN+
Sbjct: 240 QESRGGFMMKRLSQEITKCAQQNHHDVTPITMALNGASSSPGACQALASMLSRNT 294

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242022458|ref|XP_002431657.1| Negative elongation factor D, putative [Pediculus humanus corporis] gi|212516965|gb|EEB18919.1| Negative elongation factor D, putative [Pediculus humanus corporis]

 Score =  489 bits (1259), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 230/267 (86%), Positives = 249/267 (93%)

Query: 29  MENPQEVLNECLEKFSTPDYIMEPGIFSQLKRYFQAGGNPEQVIELLSQNYKAVAQMANL 88
           +ENPQEVL ECLEKFSTPDYIMEPGIF+QLKRYFQAGGNPEQVI+LLSQNY A AQMANL
Sbjct: 27  LENPQEVLTECLEKFSTPDYIMEPGIFTQLKRYFQAGGNPEQVIDLLSQNYSATAQMANL 86

Query: 89  VAEWLILGGVNVTEVQAMVENHLKDMILKTFDPKKADTIFTEEGETPAWLTEMIEHPTWR 148
           +AEWLI GGVNVT VQAMVENHLKDM+LKTFDPKKADTIFTEEGETPAWLTEMIEHPTWR
Sbjct: 87  LAEWLISGGVNVTAVQAMVENHLKDMVLKTFDPKKADTIFTEEGETPAWLTEMIEHPTWR 146

Query: 149 SLIYRLAEEYPDCLMLNFTIKLISDAGFQREITSISTAAQQIEVFSRVLKTSISNFLESS 208
           SLIYRLAEEYPDCLMLNFTIKLISDAGFQ EITSISTAAQQIEVFSRVLKT+IS FL ++
Sbjct: 147 SLIYRLAEEYPDCLMLNFTIKLISDAGFQGEITSISTAAQQIEVFSRVLKTAISGFLTNA 206

Query: 209 DDWQSSVEECAKMVCHGQHTYVYSQVLLQVLSLESKGGSKVKRLAQEITKCAQQSGHDVT 268
           DDWQ +++EC KMVCHGQHTYVYSQVLLQVLS E+KGGS +KRL+QEI KCAQ++ HDVT
Sbjct: 207 DDWQKNIQECGKMVCHGQHTYVYSQVLLQVLSQETKGGSNMKRLSQEIIKCAQKNHHDVT 266

Query: 269 PIIMALNGAAFYPQANQALSSMISRNS 295
           PI MALNGA  YPQA QAL+SM+SRN+
Sbjct: 267 PITMALNGATQYPQACQALTSMLSRNN 293

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340722089|ref|XP_003399442.1| PREDICTED: LOW QUALITY PROTEIN: negative elongation factor D-like [Bombus terrestris]

 Score =  489 bits (1259), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 230/295 (77%), Positives = 264/295 (89%), Gaps = 1/295 (0%)

Query: 1   MNDDYDDEQTHRWDQDMVDVDSDGGDDPMENPQEVLNECLEKFSTPDYIMEPGIFSQLKR 60
           M  DYD+++   W ++M   +   G+D  +NPQE+LNECL+KF TPDYIMEPGIF+QLKR
Sbjct: 1   MESDYDEDRG-AWTEEMTRSEDCLGEDSFDNPQEILNECLDKFKTPDYIMEPGIFAQLKR 59

Query: 61  YFQAGGNPEQVIELLSQNYKAVAQMANLVAEWLILGGVNVTEVQAMVENHLKDMILKTFD 120
           YFQAGGNPEQVIELLS+NY A AQMANL+AEWLIL GV VT+VQAMVEN+LKDMILKTFD
Sbjct: 60  YFQAGGNPEQVIELLSKNYTACAQMANLLAEWLILAGVKVTDVQAMVENNLKDMILKTFD 119

Query: 121 PKKADTIFTEEGETPAWLTEMIEHPTWRSLIYRLAEEYPDCLMLNFTIKLISDAGFQREI 180
           PKKAD IFTEEGETPAWLTEMI+HPTWRSLIYRLAEEYPDCLMLNFTIKLISDAGFQ EI
Sbjct: 120 PKKADKIFTEEGETPAWLTEMIQHPTWRSLIYRLAEEYPDCLMLNFTIKLISDAGFQGEI 179

Query: 181 TSISTAAQQIEVFSRVLKTSISNFLESSDDWQSSVEECAKMVCHGQHTYVYSQVLLQVLS 240
           TSISTAAQQIEVFSRVLKT+I+ FL++++DWQSS++ECAKMVCHGQHTYVYSQVLLQ+L+
Sbjct: 180 TSISTAAQQIEVFSRVLKTAIAGFLQNTEDWQSSIQECAKMVCHGQHTYVYSQVLLQILA 239

Query: 241 LESKGGSKVKRLAQEITKCAQQSGHDVTPIIMALNGAAFYPQANQALSSMISRNS 295
            ES+GG  +KRL+QEITKCAQQ+ HDVTPI MALNGA+  P A QAL+SM+SRN+
Sbjct: 240 QESRGGFMMKRLSQEITKCAQQNHHDVTPITMALNGASSSPSACQALASMLSRNT 294

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350420164|ref|XP_003492420.1| PREDICTED: negative elongation factor D-like isoform 1 [Bombus impatiens] gi|350420167|ref|XP_003492421.1| PREDICTED: negative elongation factor D-like isoform 2 [Bombus impatiens]

 Score =  489 bits (1258), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 230/295 (77%), Positives = 264/295 (89%), Gaps = 1/295 (0%)

Query: 1   MNDDYDDEQTHRWDQDMVDVDSDGGDDPMENPQEVLNECLEKFSTPDYIMEPGIFSQLKR 60
           M  DYD+++   W ++M   +   G+D  +NPQE+LNECL+KF TPDYIMEPGIF+QLKR
Sbjct: 1   MEMDYDEDRG-AWTEEMTRSEECIGEDSFDNPQEILNECLDKFKTPDYIMEPGIFAQLKR 59

Query: 61  YFQAGGNPEQVIELLSQNYKAVAQMANLVAEWLILGGVNVTEVQAMVENHLKDMILKTFD 120
           YFQAGGNPEQVIELLS+NY A AQMANL+AEWLIL GV VT+VQAMVEN+LKDMILKTFD
Sbjct: 60  YFQAGGNPEQVIELLSKNYTACAQMANLLAEWLILAGVKVTDVQAMVENNLKDMILKTFD 119

Query: 121 PKKADTIFTEEGETPAWLTEMIEHPTWRSLIYRLAEEYPDCLMLNFTIKLISDAGFQREI 180
           PKKAD IFTEEGETPAWLTEMI+HPTWRSLIYRLAEEYPDCLMLNFTIKLISDAGFQ EI
Sbjct: 120 PKKADKIFTEEGETPAWLTEMIQHPTWRSLIYRLAEEYPDCLMLNFTIKLISDAGFQGEI 179

Query: 181 TSISTAAQQIEVFSRVLKTSISNFLESSDDWQSSVEECAKMVCHGQHTYVYSQVLLQVLS 240
           TSISTAAQQIEVFSRVLKT+I+ FL++++DWQSS++ECAKMVCHGQHTYVYSQVLLQ+L+
Sbjct: 180 TSISTAAQQIEVFSRVLKTAIAGFLQNTEDWQSSIQECAKMVCHGQHTYVYSQVLLQILA 239

Query: 241 LESKGGSKVKRLAQEITKCAQQSGHDVTPIIMALNGAAFYPQANQALSSMISRNS 295
            ES+GG  +KRL+QEITKCAQQ+ HDVTPI MALNGA+  P A QAL+SM+SRN+
Sbjct: 240 QESRGGFMMKRLSQEITKCAQQNHHDVTPITMALNGASSSPSACQALASMLSRNT 294

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307208263|gb|EFN85695.1| Negative elongation factor D [Harpegnathos saltator]

 Score =  486 bits (1252), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 231/292 (79%), Positives = 261/292 (89%)

Query: 4   DYDDEQTHRWDQDMVDVDSDGGDDPMENPQEVLNECLEKFSTPDYIMEPGIFSQLKRYFQ 63
           DYD++++   D+   + D  G +D  ENP+EVLNECL+KF TPDYIMEPGIF QLKRYFQ
Sbjct: 5   DYDEDRSSWRDEIGRNSDEGGSEDVPENPKEVLNECLDKFKTPDYIMEPGIFVQLKRYFQ 64

Query: 64  AGGNPEQVIELLSQNYKAVAQMANLVAEWLILGGVNVTEVQAMVENHLKDMILKTFDPKK 123
           AGGNPEQVIELLS+NY A AQMANL+AEWLIL  VNVT+VQAMVEN+LKDMILKTFDPKK
Sbjct: 65  AGGNPEQVIELLSKNYTACAQMANLLAEWLILAAVNVTDVQAMVENNLKDMILKTFDPKK 124

Query: 124 ADTIFTEEGETPAWLTEMIEHPTWRSLIYRLAEEYPDCLMLNFTIKLISDAGFQREITSI 183
           AD IFTEEGETP+WLTEMI+HPTWRSLIYRLAEEYPDCLMLNFTIKLISDAGFQ EITSI
Sbjct: 125 ADKIFTEEGETPSWLTEMIQHPTWRSLIYRLAEEYPDCLMLNFTIKLISDAGFQGEITSI 184

Query: 184 STAAQQIEVFSRVLKTSISNFLESSDDWQSSVEECAKMVCHGQHTYVYSQVLLQVLSLES 243
           STAAQQIEVFSRVLKT+I+ FLE++++WQSS++ECAKMVCHGQHTYVYSQVLLQ+L+ E 
Sbjct: 185 STAAQQIEVFSRVLKTAIAGFLENTENWQSSIQECAKMVCHGQHTYVYSQVLLQILAQEP 244

Query: 244 KGGSKVKRLAQEITKCAQQSGHDVTPIIMALNGAAFYPQANQALSSMISRNS 295
           +GG  +KRL+QEITKCAQQ+ HDVTPI MALNGAA  P A QALSSM+SRNS
Sbjct: 245 RGGFMMKRLSQEITKCAQQNRHDVTPITMALNGAASSPGACQALSSMLSRNS 296

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|91078898|ref|XP_973390.1| PREDICTED: similar to TH1 CG9984-PA [Tribolium castaneum] gi|270004155|gb|EFA00603.1| hypothetical protein TcasGA2_TC003474 [Tribolium castaneum]

 Score =  486 bits (1251), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 232/296 (78%), Positives = 265/296 (89%), Gaps = 5/296 (1%)

Query: 1   MNDDYDDEQTHRWDQ-DMVDVDSDGGDDPMENPQEVLNECLEKFSTPDYIMEPGIFSQLK 59
           M+++YD+     WD  D +D DSD GD+  ENP++VL EC EKFST DYIMEPGIFSQLK
Sbjct: 1   MDEEYDERN---WDTVDRLDNDSDAGDE-TENPEQVLKECAEKFSTSDYIMEPGIFSQLK 56

Query: 60  RYFQAGGNPEQVIELLSQNYKAVAQMANLVAEWLILGGVNVTEVQAMVENHLKDMILKTF 119
           RYFQ+GGNP QVIE LSQNY AVAQMANL+AEWLI GGVNVT VQAMVENHLK+MILKTF
Sbjct: 57  RYFQSGGNPLQVIEELSQNYTAVAQMANLIAEWLITGGVNVTSVQAMVENHLKEMILKTF 116

Query: 120 DPKKADTIFTEEGETPAWLTEMIEHPTWRSLIYRLAEEYPDCLMLNFTIKLISDAGFQRE 179
           DPKKADTIFTEEGETPAWLT++IEHPTWRSLIYRLAEEYPDCLMLNFTIKLISDAGFQ E
Sbjct: 117 DPKKADTIFTEEGETPAWLTQLIEHPTWRSLIYRLAEEYPDCLMLNFTIKLISDAGFQAE 176

Query: 180 ITSISTAAQQIEVFSRVLKTSISNFLESSDDWQSSVEECAKMVCHGQHTYVYSQVLLQVL 239
           ITSISTAAQQ+EVFSRVLKTSI++FL + +DWQ++ +ECAKMVCHGQHTYVYSQV++ VL
Sbjct: 177 ITSISTAAQQLEVFSRVLKTSIASFLTNPEDWQNTSKECAKMVCHGQHTYVYSQVIIHVL 236

Query: 240 SLESKGGSKVKRLAQEITKCAQQSGHDVTPIIMALNGAAFYPQANQALSSMISRNS 295
           + ESKGGS +KRL+QEITKCAQ++GHDVTPI MALNGA+ YP A QAL+SM+S+N+
Sbjct: 237 ARESKGGSSMKRLSQEITKCAQKNGHDVTPITMALNGASAYPLACQALTSMLSKNT 292

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|322786011|gb|EFZ12627.1| hypothetical protein SINV_15376 [Solenopsis invicta]

 Score =  485 bits (1249), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 230/295 (77%), Positives = 262/295 (88%)

Query: 1   MNDDYDDEQTHRWDQDMVDVDSDGGDDPMENPQEVLNECLEKFSTPDYIMEPGIFSQLKR 60
           M  DYDD+++   D+    +D   G+D  +NPQEVLNECL+KF T DYIMEPGIF+QLKR
Sbjct: 1   MESDYDDDRSGWGDEMNRSIDECSGEDTFDNPQEVLNECLDKFKTADYIMEPGIFAQLKR 60

Query: 61  YFQAGGNPEQVIELLSQNYKAVAQMANLVAEWLILGGVNVTEVQAMVENHLKDMILKTFD 120
           YFQAGGNPEQVIELLS+NY A AQ ANL+AEWLIL GV VT+VQAMVEN+LKDMILKTFD
Sbjct: 61  YFQAGGNPEQVIELLSKNYTACAQTANLLAEWLILAGVKVTDVQAMVENNLKDMILKTFD 120

Query: 121 PKKADTIFTEEGETPAWLTEMIEHPTWRSLIYRLAEEYPDCLMLNFTIKLISDAGFQREI 180
           PKKAD IFTEEGETPAWLTEMI+HPTWRSLIYRLAEEYPDCLMLNFTIKLISDAGFQ EI
Sbjct: 121 PKKADKIFTEEGETPAWLTEMIQHPTWRSLIYRLAEEYPDCLMLNFTIKLISDAGFQGEI 180

Query: 181 TSISTAAQQIEVFSRVLKTSISNFLESSDDWQSSVEECAKMVCHGQHTYVYSQVLLQVLS 240
           TSISTAAQQIEVFSRVLKT+I+ FL+++++WQSS++ECAKMVCHGQHTYVYSQVLLQ+L+
Sbjct: 181 TSISTAAQQIEVFSRVLKTAIAGFLQNTENWQSSIQECAKMVCHGQHTYVYSQVLLQILA 240

Query: 241 LESKGGSKVKRLAQEITKCAQQSGHDVTPIIMALNGAAFYPQANQALSSMISRNS 295
            ES+GG  +KRL+QEITKCAQQ+ HDVTPI MALNGAA  P A QAL+SM+SRN+
Sbjct: 241 QESRGGFMMKRLSQEITKCAQQNRHDVTPITMALNGAASSPGACQALASMLSRNT 295

Source: Solenopsis invicta

Species: Solenopsis invicta

Genus: Solenopsis

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332021804|gb|EGI62150.1| Negative elongation factor D [Acromyrmex echinatior]

 Score =  483 bits (1244), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 231/295 (78%), Positives = 257/295 (87%)

Query: 1   MNDDYDDEQTHRWDQDMVDVDSDGGDDPMENPQEVLNECLEKFSTPDYIMEPGIFSQLKR 60
           M  DYDD+     D+     D   G+D  +NPQEVLNECL+KF T DYIMEPGIF QLKR
Sbjct: 7   METDYDDDHGGWRDERNRSTDEYSGEDTFDNPQEVLNECLDKFKTADYIMEPGIFVQLKR 66

Query: 61  YFQAGGNPEQVIELLSQNYKAVAQMANLVAEWLILGGVNVTEVQAMVENHLKDMILKTFD 120
           YFQAGGNPEQVIELLS+NY A AQMANL+AEWLIL GV VT+VQAMVEN+LKDMILK FD
Sbjct: 67  YFQAGGNPEQVIELLSKNYTACAQMANLLAEWLILAGVKVTDVQAMVENNLKDMILKNFD 126

Query: 121 PKKADTIFTEEGETPAWLTEMIEHPTWRSLIYRLAEEYPDCLMLNFTIKLISDAGFQREI 180
           PKKAD IFTEEGETPAWLTEMI+HPTWRSLIYRLAEEYPDCLMLNFTIKLISDAGFQ EI
Sbjct: 127 PKKADKIFTEEGETPAWLTEMIQHPTWRSLIYRLAEEYPDCLMLNFTIKLISDAGFQGEI 186

Query: 181 TSISTAAQQIEVFSRVLKTSISNFLESSDDWQSSVEECAKMVCHGQHTYVYSQVLLQVLS 240
           TSISTAAQQIEVFSRVLKT+I+ FL+++++WQSS++ECAKMVCHGQHTYVYSQVLLQ+L+
Sbjct: 187 TSISTAAQQIEVFSRVLKTAIAGFLQNTENWQSSIQECAKMVCHGQHTYVYSQVLLQILA 246

Query: 241 LESKGGSKVKRLAQEITKCAQQSGHDVTPIIMALNGAAFYPQANQALSSMISRNS 295
            ES+GG  +KRL+QEITKCAQQ  HDVTPI MALNGAA  P A QAL+SM+SRNS
Sbjct: 247 QESRGGFMMKRLSQEITKCAQQDRHDVTPITMALNGAASSPGACQALASMLSRNS 301

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|193211439|ref|NP_001123224.1| negative elongation factor D [Nasonia vitripennis]

 Score =  480 bits (1235), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 230/295 (77%), Positives = 260/295 (88%), Gaps = 2/295 (0%)

Query: 1   MNDDYDDEQTHRWDQDMVDVDSDGGDDPMENPQEVLNECLEKFSTPDYIMEPGIFSQLKR 60
           M   + +E ++ W+ DM   D   G+DP ENPQ+VL ECL+KF+TPDYIMEPGIF+QLKR
Sbjct: 1   MEPSFGEEHSN-WE-DMNRGDDISGEDPSENPQQVLKECLDKFNTPDYIMEPGIFTQLKR 58

Query: 61  YFQAGGNPEQVIELLSQNYKAVAQMANLVAEWLILGGVNVTEVQAMVENHLKDMILKTFD 120
           YFQAGGNPE VIELLS+NY A AQMANL+AEWLIL GV VT+VQAMVEN+LKDMILKTFD
Sbjct: 59  YFQAGGNPETVIELLSKNYTACAQMANLLAEWLILAGVKVTDVQAMVENNLKDMILKTFD 118

Query: 121 PKKADTIFTEEGETPAWLTEMIEHPTWRSLIYRLAEEYPDCLMLNFTIKLISDAGFQREI 180
           PKKAD IFTEEGETPAWLTEMI+HPTWRSLIYRLAEEYPDCLMLNFTIKLISDAGFQ EI
Sbjct: 119 PKKADKIFTEEGETPAWLTEMIQHPTWRSLIYRLAEEYPDCLMLNFTIKLISDAGFQGEI 178

Query: 181 TSISTAAQQIEVFSRVLKTSISNFLESSDDWQSSVEECAKMVCHGQHTYVYSQVLLQVLS 240
           TSISTAAQQIEVFSRVLKT+I+ FL ++++WQSS++ECAKMVCHGQHTYVYSQVLL +L+
Sbjct: 179 TSISTAAQQIEVFSRVLKTAIAGFLRNTENWQSSIQECAKMVCHGQHTYVYSQVLLHILA 238

Query: 241 LESKGGSKVKRLAQEITKCAQQSGHDVTPIIMALNGAAFYPQANQALSSMISRNS 295
            E KGG  +KRL+QEITKCAQQS HDVTPI MALNGAA  P A QAL+SM+SRN+
Sbjct: 239 QEPKGGFMMKRLSQEITKCAQQSRHDVTPITMALNGAAGSPAACQALASMLSRNN 293

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	295
FB|FBgn0010416	578	TH1 "TH1" [Drosophila melanoga	0.901	0.460	0.748	9.5e-105
UNIPROTKB|F1NR08	602	TH1L "Uncharacterized protein"	0.989	0.485	0.556	4.9e-85
UNIPROTKB|Q5ZIQ8	583	TH1L "Uncharacterized protein"	0.989	0.500	0.556	4.9e-85
UNIPROTKB|Q8IXH7	590	NELFCD "Negative elongation fa	0.996	0.498	0.554	1.3e-84
MGI|MGI:1926424	591	Nelfcd "negative elongation fa	0.901	0.450	0.602	1.3e-84
UNIPROTKB|F1PIH1	564	TH1L "Uncharacterized protein"	0.901	0.471	0.599	2.1e-84
UNIPROTKB|F1MW69	600	TH1L "Uncharacterized protein"	0.901	0.443	0.599	2.7e-84
UNIPROTKB|A5GFY4	590	TH1L "Negative elongation fact	0.996	0.498	0.554	3.4e-84
UNIPROTKB|A5GFY5	291	TH1L "Negative elongation fact	0.901	0.914	0.599	4.4e-84
ZFIN|ZDB-GENE-040426-720	579	nelfcd "negative elongation fa	0.888	0.452	0.574	4.7e-80

FB|FBgn0010416 TH1 "TH1" [Drosophila melanogaster (taxid:7227)]

 Score = 1037 (370.1 bits), Expect = 9.5e-105, P = 9.5e-105
 Identities = 199/266 (74%), Positives = 226/266 (84%)

Query:    30 ENPQEVLNECLEKFSTPDYIMEPGIFSQLKRYFQAGGNPEQVIELLSQNYKAVAQMANLV 89
             +NPQ+ + ECLEKF TPDYIMEPGIF+QLKRYFQ+GG+PE+VI +LS+NYKAVAQMANL+
Sbjct:    26 DNPQKTIQECLEKFLTPDYIMEPGIFTQLKRYFQSGGSPEEVISMLSENYKAVAQMANLL 85

Query:    90 AEWLILGGVNVTEVQAMVENHLKDMILKTFDPKKADTIFTEEGETPAWLTEMIEHPTWRS 149
             AEWLIL GV VTEVQAMVENHLK+MILK+FDPKKADTIFTEEGETP WLTEMI+H TWRS
Sbjct:    86 AEWLILAGVKVTEVQAMVENHLKEMILKSFDPKKADTIFTEEGETPDWLTEMIDHYTWRS 145

Query:   150 LIYRLAEEYPDCLMLNFTIKLISDAGFQREITSISTAAQQIEVFSRVLKTSISNFLESSD 209
             LIYRLAEEYPDCLMLNFTIKLISDAGFQ EITSISTAAQQIEVFSRVLKTSI  FL + D
Sbjct:   146 LIYRLAEEYPDCLMLNFTIKLISDAGFQSEITSISTAAQQIEVFSRVLKTSIVKFLNNPD 205

Query:   210 DWQSSVEECAKMVCHGQHTXXXXXXXXXXXXXESKGGSKVKRLAQEITKCAQQSGHDVTP 269
             D   +++ECA+MVCHGQHT             E KGG  +KRL+QEI K A Q+  +VTP
Sbjct:   206 DVHGAIQECARMVCHGQHTYVYSQVLIQVLSQEQKGGFNMKRLSQEIIKYALQNNQNVTP 265

Query:   270 IIMALNGAAFYPQANQALSSMISRNS 295
             I MALNG+A YPQA QAL+SM++RN+
Sbjct:   266 ITMALNGSAVYPQACQALTSMLTRNT 291

GO:0003729 "mRNA binding" evidence=IDA

GO:0017053 "transcriptional repressor complex" evidence=IDA

GO:0007070 "negative regulation of transcription from RNA polymerase II promoter during mitosis" evidence=IDA

GO:0005634 "nucleus" evidence=IDA

GO:0032021 "NELF complex" evidence=IPI

GO:0034244 "negative regulation of transcription elongation from RNA polymerase II promoter" evidence=IDA

GO:0022008 "neurogenesis" evidence=IMP

UNIPROTKB|F1NR08 TH1L "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 851 (304.6 bits), Expect = 4.9e-85, P = 4.9e-85
 Identities = 163/293 (55%), Positives = 207/293 (70%)

Query:     4 DYDDEQTHRWXXXXXXXXXXXXXXPMENPQEVLNECLEKFSTPDYIMEPGIFSQLKRYFQ 63
             DY +     W                E+  EV  ECL+KFSTPDYIMEP IF+ LKRYFQ
Sbjct:    24 DYFEGGAAEWGNEADGGAQDDEDGEGEDDAEVQQECLKKFSTPDYIMEPSIFNTLKRYFQ 83

Query:    64 AGGNPEQVIELLSQNYKAVAQMANLVAEWLILGGVNVTEVQAMVENHLKDMILKTFDPKK 123
             AGG+PE VI+LLS+NY AVAQ  NL+AEWLI  GV   +VQ  VENHLK +++K FDP+K
Sbjct:    84 AGGSPENVIQLLSENYTAVAQTVNLLAEWLIQTGVEPVQVQETVENHLKSLLIKHFDPRK 143

Query:   124 ADTIFTEEGETPAWLTEMIEHPTWRSLIYRLAEEYPDCLMLNFTIKLISDAGFQREITSI 183
             AD+IFTEEGETPAWL +MI H TWR L Y+LAE +PDCLMLNFT+KLISDAG+Q EITS+
Sbjct:   144 ADSIFTEEGETPAWLEQMIAHTTWRDLFYKLAEAHPDCLMLNFTVKLISDAGYQGEITSV 203

Query:   184 STAAQQIEVFSRVLKTSISNFLESSDD-WQSSVEECAKMVCHGQHTXXXXXXXXXXXXXE 242
             STA QQ+EVFSRVL+TS++  L+  ++  + ++ E AKMVCHG+HT             E
Sbjct:   204 STACQQLEVFSRVLRTSLATILDGGEENLEKNLPEFAKMVCHGEHTYLFAQSMMSILAQE 263

Query:   243 SKGGSKVKRLAQEITKCAQQSGHDVTPIIMALNGAAFYPQANQALSSMISRNS 295
              +GGS V+R+AQE+ + A + GHD + I +AL  AA YP+A QAL +M+S+ +
Sbjct:   264 EQGGSAVRRIAQEVQRYAHEKGHDASQITLALGTAASYPRACQALGAMLSKGA 316

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=IEA

GO:0032021 "NELF complex" evidence=IEA

UNIPROTKB|Q5ZIQ8 TH1L "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 851 (304.6 bits), Expect = 4.9e-85, P = 4.9e-85
 Identities = 163/293 (55%), Positives = 207/293 (70%)

Query:     4 DYDDEQTHRWXXXXXXXXXXXXXXPMENPQEVLNECLEKFSTPDYIMEPGIFSQLKRYFQ 63
             DY +     W                E+  EV  ECL+KFSTPDYIMEP IF+ LKRYFQ
Sbjct:     5 DYFEGGAAEWGNEADGGAQDDEDGEGEDDAEVQQECLKKFSTPDYIMEPSIFNTLKRYFQ 64

Query:    64 AGGNPEQVIELLSQNYKAVAQMANLVAEWLILGGVNVTEVQAMVENHLKDMILKTFDPKK 123
             AGG+PE VI+LLS+NY AVAQ  NL+AEWLI  GV   +VQ  VENHLK +++K FDP+K
Sbjct:    65 AGGSPENVIQLLSENYTAVAQTVNLLAEWLIQTGVEPVQVQETVENHLKSLLIKHFDPRK 124

Query:   124 ADTIFTEEGETPAWLTEMIEHPTWRSLIYRLAEEYPDCLMLNFTIKLISDAGFQREITSI 183
             AD+IFTEEGETPAWL +MI H TWR L Y+LAE +PDCLMLNFT+KLISDAG+Q EITS+
Sbjct:   125 ADSIFTEEGETPAWLEQMIAHTTWRDLFYKLAEAHPDCLMLNFTVKLISDAGYQGEITSV 184

Query:   184 STAAQQIEVFSRVLKTSISNFLESSDD-WQSSVEECAKMVCHGQHTXXXXXXXXXXXXXE 242
             STA QQ+EVFSRVL+TS++  L+  ++  + ++ E AKMVCHG+HT             E
Sbjct:   185 STACQQLEVFSRVLRTSLATILDGGEENLEKNLPEFAKMVCHGEHTYLFAQSMMSILAQE 244

Query:   243 SKGGSKVKRLAQEITKCAQQSGHDVTPIIMALNGAAFYPQANQALSSMISRNS 295
              +GGS V+R+AQE+ + A + GHD + I +AL  AA YP+A QAL +M+S+ +
Sbjct:   245 EQGGSAVRRIAQEVQRYAHEKGHDASQITLALGTAASYPRACQALGAMLSKGA 297

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=IEA

GO:0032021 "NELF complex" evidence=IEA

UNIPROTKB|Q8IXH7 NELFCD "Negative elongation factor C/D" [Homo sapiens (taxid:9606)]

 Score = 847 (303.2 bits), Expect = 1.3e-84, P = 1.3e-84
 Identities = 164/296 (55%), Positives = 208/296 (70%)

Query:     1 MNDDYDDEQTHRWXXXXXXXXXXXXXXPMENPQEVLNECLEKFSTPDYIMEPGIFSQLKR 60
             M++DY       W                E+  EV  ECL KFST DYIMEP IF+ LKR
Sbjct:    10 MDEDYYGSAAE-WGDEADGGQQEDDSGEGEDDAEVQQECLHKFSTRDYIMEPSIFNTLKR 68

Query:    61 YFQAGGNPEQVIELLSQNYKAVAQMANLVAEWLILGGVNVTEVQAMVENHLKDMILKTFD 120
             YFQAGG+PE VI+LLS+NY AVAQ  NL+AEWLI  GV   +VQ  VENHLK +++K FD
Sbjct:    69 YFQAGGSPENVIQLLSENYTAVAQTVNLLAEWLIQTGVEPVQVQETVENHLKSLLIKHFD 128

Query:   121 PKKADTIFTEEGETPAWLTEMIEHPTWRSLIYRLAEEYPDCLMLNFTIKLISDAGFQREI 180
             P+KAD+IFTEEGETPAWL +MI H TWR L Y+LAE +PDCLMLNFT+KLISDAG+Q EI
Sbjct:   129 PRKADSIFTEEGETPAWLEQMIAHTTWRDLFYKLAEAHPDCLMLNFTVKLISDAGYQGEI 188

Query:   181 TSISTAAQQIEVFSRVLKTSISNFLESSDD-WQSSVEECAKMVCHGQHTXXXXXXXXXXX 239
             TS+STA QQ+EVFSRVL+TS++  L+  ++  + ++ E AKMVCHG+HT           
Sbjct:   189 TSVSTACQQLEVFSRVLRTSLATILDGGEENLEKNLPEFAKMVCHGEHTYLFAQAMMSVL 248

Query:   240 XXESKGGSKVKRLAQEITKCAQQSGHDVTPIIMALNGAAFYPQANQALSSMISRNS 295
               E +GGS V+R+AQE+ + AQ+ GHD + I +AL  AA YP+A QAL +M+S+ +
Sbjct:   249 AQEEQGGSAVRRIAQEVQRFAQEKGHDASQITLALGTAASYPRACQALGAMLSKGA 304

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=IEA

GO:0032021 "NELF complex" evidence=IDA

GO:0005654 "nucleoplasm" evidence=TAS

GO:0006366 "transcription from RNA polymerase II promoter" evidence=TAS

GO:0006368 "transcription elongation from RNA polymerase II promoter" evidence=TAS

GO:0010467 "gene expression" evidence=TAS

GO:0016032 "viral reproduction" evidence=TAS

GO:0050434 "positive regulation of viral transcription" evidence=TAS

GO:0005515 "protein binding" evidence=IPI

MGI|MGI:1926424 Nelfcd "negative elongation factor complex member C/D, Th1l" [Mus musculus (taxid:10090)]

 Score = 847 (303.2 bits), Expect = 1.3e-84, P = 1.3e-84
 Identities = 161/267 (60%), Positives = 202/267 (75%)

Query:    30 ENPQEVLNECLEKFSTPDYIMEPGIFSQLKRYFQAGGNPEQVIELLSQNYKAVAQMANLV 89
             E+  EV  ECL KFST DYIMEP IF+ LKRYFQAGG+PE VI+LLS+NY AVAQ  NL+
Sbjct:    39 EDDAEVQQECLHKFSTRDYIMEPSIFNTLKRYFQAGGSPENVIQLLSENYTAVAQTVNLL 98

Query:    90 AEWLILGGVNVTEVQAMVENHLKDMILKTFDPKKADTIFTEEGETPAWLTEMIEHPTWRS 149
             AEWLI  GV   +VQ  VENHLK +++K FDP+KAD+IFTEEGETPAWL +MI H TWR 
Sbjct:    99 AEWLIQTGVEPVQVQETVENHLKSLLIKHFDPRKADSIFTEEGETPAWLEQMIAHTTWRD 158

Query:   150 LIYRLAEEYPDCLMLNFTIKLISDAGFQREITSISTAAQQIEVFSRVLKTSISNFLESSD 209
             L Y+LAE +PDCLMLNFT+KLISDAG+Q EITS+STA QQ+EVFSRVL+TS++  L+  +
Sbjct:   159 LFYKLAEAHPDCLMLNFTVKLISDAGYQGEITSVSTACQQLEVFSRVLRTSLATILDGGE 218

Query:   210 D-WQSSVEECAKMVCHGQHTXXXXXXXXXXXXXESKGGSKVKRLAQEITKCAQQSGHDVT 268
             +  + ++ E AKMVCHG+HT             E +GGS V+R+AQE+ + AQ+ GHD +
Sbjct:   219 ENLEKNLPEFAKMVCHGEHTYLFAQAMMSVLAQEEQGGSAVRRVAQEVQRFAQEKGHDAS 278

Query:   269 PIIMALNGAAFYPQANQALSSMISRNS 295
              I +AL  AA YP+A QAL +M+SR +
Sbjct:   279 QITLALGTAASYPRACQALGAMLSRGA 305

GO:0005634 "nucleus" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0032021 "NELF complex" evidence=ISO

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=IEA

UNIPROTKB|F1PIH1 TH1L "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 845 (302.5 bits), Expect = 2.1e-84, P = 2.1e-84
 Identities = 160/267 (59%), Positives = 202/267 (75%)

Query:    30 ENPQEVLNECLEKFSTPDYIMEPGIFSQLKRYFQAGGNPEQVIELLSQNYKAVAQMANLV 89
             E+  EV  ECL KFST DYIMEP IF+ LKRYFQAGG+PE VI+LLS+NY AVAQ  NL+
Sbjct:    10 EDDAEVQQECLHKFSTRDYIMEPSIFNTLKRYFQAGGSPENVIQLLSENYTAVAQTVNLL 69

Query:    90 AEWLILGGVNVTEVQAMVENHLKDMILKTFDPKKADTIFTEEGETPAWLTEMIEHPTWRS 149
             AEWLI  GV   +VQ  VENHLK +++K FDP+KAD+IFTEEGETPAWL +MI H TWR 
Sbjct:    70 AEWLIQTGVEPVQVQETVENHLKSLLIKHFDPRKADSIFTEEGETPAWLEQMIAHTTWRD 129

Query:   150 LIYRLAEEYPDCLMLNFTIKLISDAGFQREITSISTAAQQIEVFSRVLKTSISNFLESSD 209
             L Y+LAE +PDCLMLNFT+KLISDAG+Q EITS+STA QQ+EVFSRVL+TS++  L+  +
Sbjct:   130 LFYKLAEAHPDCLMLNFTVKLISDAGYQGEITSVSTACQQLEVFSRVLRTSLATILDGGE 189

Query:   210 D-WQSSVEECAKMVCHGQHTXXXXXXXXXXXXXESKGGSKVKRLAQEITKCAQQSGHDVT 268
             +  + ++ E AKMVCHG+HT             E +GGS V+R+AQE+ + AQ+ GHD +
Sbjct:   190 ENLEKNLPEFAKMVCHGEHTYLFAQAMMSVLAQEEQGGSAVRRIAQEVQRFAQEKGHDAS 249

Query:   269 PIIMALNGAAFYPQANQALSSMISRNS 295
              I +AL  AA YP+A QAL +M+S+ +
Sbjct:   250 QITLALGTAASYPRACQALGAMLSKGA 276

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

UNIPROTKB|F1MW69 TH1L "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 844 (302.2 bits), Expect = 2.7e-84, P = 2.7e-84
 Identities = 160/267 (59%), Positives = 202/267 (75%)

Query:    30 ENPQEVLNECLEKFSTPDYIMEPGIFSQLKRYFQAGGNPEQVIELLSQNYKAVAQMANLV 89
             E+  EV  ECL KFST DYIMEP IF+ LKRYFQAGG+PE VI+LLS+NY AVAQ  NL+
Sbjct:    48 EDDAEVQQECLHKFSTRDYIMEPSIFNTLKRYFQAGGSPENVIQLLSENYTAVAQTVNLL 107

Query:    90 AEWLILGGVNVTEVQAMVENHLKDMILKTFDPKKADTIFTEEGETPAWLTEMIEHPTWRS 149
             AEWLI  GV   +VQ  VENHLK +++K FDP+KAD+IFTEEGETPAWL +MI H TWR 
Sbjct:   108 AEWLIQTGVEPVQVQETVENHLKSLLIKHFDPRKADSIFTEEGETPAWLEQMIAHTTWRD 167

Query:   150 LIYRLAEEYPDCLMLNFTIKLISDAGFQREITSISTAAQQIEVFSRVLKTSISNFLESSD 209
             L Y+LAE +PDCLMLNFT+KLISDAG+Q EITS+STA QQ+EVFSRVL+TS++  L+  +
Sbjct:   168 LFYKLAEAHPDCLMLNFTVKLISDAGYQGEITSVSTACQQLEVFSRVLRTSLATILDGGE 227

Query:   210 D-WQSSVEECAKMVCHGQHTXXXXXXXXXXXXXESKGGSKVKRLAQEITKCAQQSGHDVT 268
             +  + ++ E AKMVCHG+HT             E +GGS V+R+AQE+ + AQ+ GHD +
Sbjct:   228 ENLEKNLPEFAKMVCHGEHTYLFAQALMSVLAQEEQGGSAVRRIAQEVQRFAQERGHDAS 287

Query:   269 PIIMALNGAAFYPQANQALSSMISRNS 295
              I +AL  AA YP+A QAL +M+S+ +
Sbjct:   288 QITLALGTAASYPRACQALGAMLSKGA 314

GO:0032021 "NELF complex" evidence=IEA

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=IEA

UNIPROTKB|A5GFY4 TH1L "Negative elongation factor D" [Sus scrofa (taxid:9823)]

 Score = 843 (301.8 bits), Expect = 3.4e-84, P = 3.4e-84
 Identities = 164/296 (55%), Positives = 207/296 (69%)

Query:     1 MNDDYDDEQTHRWXXXXXXXXXXXXXXPMENPQEVLNECLEKFSTPDYIMEPGIFSQLKR 60
             M++DY       W                E+  EV  ECL KFST DYIMEP IF+ LKR
Sbjct:    10 MDEDYFGSAAE-WGDEADGGQQEDDYGEGEDDAEVQQECLHKFSTRDYIMEPSIFNTLKR 68

Query:    61 YFQAGGNPEQVIELLSQNYKAVAQMANLVAEWLILGGVNVTEVQAMVENHLKDMILKTFD 120
             YFQAGG+PE VI+LLS+NY AVAQ  NL+AEWLI  GV   +VQ  VENHLK +++K FD
Sbjct:    69 YFQAGGSPENVIQLLSENYTAVAQTVNLLAEWLIQTGVEPVQVQETVENHLKSLLIKHFD 128

Query:   121 PKKADTIFTEEGETPAWLTEMIEHPTWRSLIYRLAEEYPDCLMLNFTIKLISDAGFQREI 180
             P+KAD+IFTEEGETPAWL +MI H TWR L Y+LAE +PDCLMLNFT+KLISDAG+Q EI
Sbjct:   129 PRKADSIFTEEGETPAWLEQMIAHTTWRDLFYKLAEAHPDCLMLNFTVKLISDAGYQGEI 188

Query:   181 TSISTAAQQIEVFSRVLKTSISNFLESSDD-WQSSVEECAKMVCHGQHTXXXXXXXXXXX 239
             TS+STA QQ+EVFSRVL+TS++  L+  ++  +  + E AKMVCHG+HT           
Sbjct:   189 TSVSTACQQLEVFSRVLRTSLATILDGGEENLEKHLPEFAKMVCHGEHTYLFAQAMMSVL 248

Query:   240 XXESKGGSKVKRLAQEITKCAQQSGHDVTPIIMALNGAAFYPQANQALSSMISRNS 295
               E +GGS V+R+AQE+ + AQ+ GHD + I +AL  AA YP+A QAL +M+S+ +
Sbjct:   249 AQEEQGGSAVRRVAQEVQRFAQEKGHDASQITLALGTAASYPRACQALGAMLSKGA 304

GO:0032021 "NELF complex" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=IEA

UNIPROTKB|A5GFY5 TH1L "Negative elongation factor D" [Sus scrofa (taxid:9823)]

 Score = 842 (301.5 bits), Expect = 4.4e-84, P = 4.4e-84
 Identities = 160/267 (59%), Positives = 201/267 (75%)

Query:    30 ENPQEVLNECLEKFSTPDYIMEPGIFSQLKRYFQAGGNPEQVIELLSQNYKAVAQMANLV 89
             E+  EV  ECL KFST DYIMEP IF+ LKRYFQAGG+PE VI+LLS+NY AVAQ  NL+
Sbjct:    22 EDDAEVQQECLHKFSTRDYIMEPSIFNTLKRYFQAGGSPENVIQLLSENYTAVAQTVNLL 81

Query:    90 AEWLILGGVNVTEVQAMVENHLKDMILKTFDPKKADTIFTEEGETPAWLTEMIEHPTWRS 149
             AEWLI  GV   +VQ  VENHLK +++K FDP+KAD+IFTEEGETPAWL +MI H TWR 
Sbjct:    82 AEWLIQTGVEPVQVQETVENHLKSLLIKHFDPRKADSIFTEEGETPAWLEQMIAHTTWRD 141

Query:   150 LIYRLAEEYPDCLMLNFTIKLISDAGFQREITSISTAAQQIEVFSRVLKTSISNFLESSD 209
             L Y+LAE +PDCLMLNFT+KLISDAG+Q EITS+STA QQ+EVFSRVL+TS++  L+  +
Sbjct:   142 LFYKLAEAHPDCLMLNFTVKLISDAGYQGEITSVSTACQQLEVFSRVLRTSLATILDGGE 201

Query:   210 D-WQSSVEECAKMVCHGQHTXXXXXXXXXXXXXESKGGSKVKRLAQEITKCAQQSGHDVT 268
             +  +  + E AKMVCHG+HT             E +GGS V+R+AQE+ + AQ+ GHD +
Sbjct:   202 ENLEKHLPEFAKMVCHGEHTYLFAQAMMSVLAQEEQGGSAVRRVAQEVQRFAQEKGHDAS 261

Query:   269 PIIMALNGAAFYPQANQALSSMISRNS 295
              I +AL  AA YP+A QAL +M+S+ +
Sbjct:   262 QITLALGTAASYPRACQALGAMLSKGA 288

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

ZFIN|ZDB-GENE-040426-720 nelfcd "negative elongation factor complex member C/D" [Danio rerio (taxid:7955)]

 Score = 804 (288.1 bits), Expect = 4.7e-80, P = 4.7e-80
 Identities = 151/263 (57%), Positives = 197/263 (74%)

Query:    34 EVLNECLEKFSTPDYIMEPGIFSQLKRYFQAGGNPEQVIELLSQNYKAVAQMANLVAEWL 93
             +V  +CL+KFS+ DYIMEP +F+ LK YFQAGG+PE VI+LLS+NY AVAQ  NL+AEWL
Sbjct:    31 KVQEDCLQKFSSRDYIMEPTVFNTLKSYFQAGGSPEHVIQLLSENYSAVAQTVNLLAEWL 90

Query:    94 ILGGVNVTEVQAMVENHLKDMILKTFDPKKADTIFTEEGETPAWLTEMIEHPTWRSLIYR 153
             I  GV   +VQ  VENHLK +++K FDP+KAD+IFT EGETPAWL +MI H TWR L Y+
Sbjct:    91 IQMGVEPAQVQERVENHLKSLLIKHFDPQKADSIFTVEGETPAWLEQMIAHTTWRDLFYK 150

Query:   154 LAEEYPDCLMLNFTIKLISDAGFQREITSISTAAQQIEVFSRVLKTSISNFLESSD-DWQ 212
             LAE +PDCLMLNFT+KLISDAG+Q EITS+STA QQ+EVFSRVL+TS++  L+  + + +
Sbjct:   151 LAEAHPDCLMLNFTVKLISDAGYQGEITSVSTACQQLEVFSRVLRTSLATLLDGGEQNLE 210

Query:   213 SSVEECAKMVCHGQHTXXXXXXXXXXXXXESKGGSKVKRLAQEITKCAQQSGHDVTPIIM 272
              ++ E AKMVCHG+HT             E +GGS ++R+ QE+ K A + GHD + I +
Sbjct:   211 KNLPEFAKMVCHGEHTYLFAQAMMSILAQEEQGGSAMRRIGQEVQKYAHERGHDASQITL 270

Query:   273 ALNGAAFYPQANQALSSMISRNS 295
             AL  AA YP+A QAL +M+S+ +
Sbjct:   271 ALGTAAAYPRACQALGAMLSKGA 293

GO:0005634 "nucleus" evidence=IEA

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=IEA

GO:0003674 "molecular_function" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q8IXH7	NELFD_HUMAN	No assigned EC number	0.6014	0.9322	0.4661	yes	N/A
Q922L6	NELFD_MOUSE	No assigned EC number	0.6028	0.9322	0.4653	yes	N/A
Q5RFA0	NELFD_PONAB	No assigned EC number	0.6014	0.9322	0.4661	yes	N/A
A5GFY4	NELFD_PIG	No assigned EC number	0.6014	0.9322	0.4661	yes	N/A
Q24134	NELFD_DROME	No assigned EC number	0.7661	0.9288	0.4740	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	295
pfam04858	582	pfam04858, TH1, TH1 protein	1e-157

>gnl|CDD|218295 pfam04858, TH1, TH1 protein

 Score =  450 bits (1158), Expect = e-157
 Identities = 182/300 (60%), Positives = 213/300 (71%), Gaps = 7/300 (2%)

Query: 1   MNDDYDDEQTHRWDQDMVDV----DSDGGDDPMENPQEVLNECLEKFSTPDYIMEPGIFS 56
           M +DY  E T  WD+         D D   +  ENP  VL ECL +FST DYIMEP IF 
Sbjct: 1   MEEDY--EVTSGWDRSDGRGTAQGDDDARAEVDENPTAVLQECLRRFSTKDYIMEPSIFD 58

Query: 57  QLKRYFQAGGNPEQVIELLSQNYKAVAQMANLVAEWLILGGVNVTEVQAMVENHLKDMIL 116
            LKRYFQAGG PE VIELLS+NY+AVAQM NL+AEWLI+ GV+ T+VQAMVENHLK +I 
Sbjct: 59  DLKRYFQAGGAPETVIELLSENYRAVAQMTNLLAEWLIVTGVSPTKVQAMVENHLKTLIR 118

Query: 117 KTFDPKKADTIFTEEGETPAWLTEMIEHPTWRSLIYRLAEEYPDCLMLNFTIKLISDAGF 176
           K FDP KAD IFTEEGETPAWL  MI H TWR+L+Y LAEE P+CLMLNFTIKLISDAG 
Sbjct: 119 KRFDPNKADAIFTEEGETPAWLDGMIRHETWRALLYSLAEENPNCLMLNFTIKLISDAGM 178

Query: 177 QREITSISTAAQQIEVFSRVLKTSISNFLES-SDDWQSSVEECAKMVCHGQHTYVYSQVL 235
           Q EITS+STAAQQ EVFSRVL T I+  L S  DD + ++EE A MVCHG HTYV+ Q++
Sbjct: 179 QHEITSLSTAAQQFEVFSRVLATHIAGILVSGPDDVRRAIEELASMVCHGIHTYVFGQLM 238

Query: 236 LQVLSLESKGGSKVKRLAQEITKCAQQSGHDVTPIIMALNGAAFYPQANQALSSMISRNS 295
           L VL  E  GG+   RL+QEI + A +     T I +AL  +A  PQA  AL+ M+SR +
Sbjct: 239 LAVLGQEEDGGTAAARLSQEIEEAAAKLHGAATVITLALATSAVDPQACYALADMLSRGA 298

TH1 is a highly conserved but uncharacterized metazoan protein. No homologue has been identified in Caenorhabditis elegans. TH1 binds specifically to A-Raf kinase. Length = 582

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	295
PF04858	584	TH1: TH1 protein; InterPro: IPR006942 TH1 is a hig	100.0

>PF04858 TH1: TH1 protein; InterPro: IPR006942 TH1 is a highly conserved but uncharacterised metazoan protein

Probab=100.00  E-value=8.8e-102  Score=780.67  Aligned_cols=293  Identities=60%  Similarity=0.999  Sum_probs=279.4

Q ss_pred             CCCccccccccCCCCcCCC----CCCCCCCCCCCChHHHHHHHHHhcCCCCccccccHHHHHHHHHHcCCChHHHHHHHh
Q psy15689          1 MNDDYDDEQTHRWDQDMVD----VDSDGGDDPMENPQEVLNECLEKFSTPDYIMEPGIFSQLKRYFQAGGNPEQVIELLS   76 (295)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~e~~~~~~~e~~~~l~~~DaIMEp~i~~~ik~Y~~~GG~Pe~vV~~Ls   76 (295)
                      |++||++.+  +|+...+.    +++++.++.+++++.++++|+++|++|||||||+|+++||+||++||+|++||++||
T Consensus         1 ~~~~~~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~D~Imep~i~~~i~~y~~~gG~p~~vv~~Ls   78 (584)
T PF04858_consen    1 MEEDYEGDR--GWESSDGEGDDQEDDEEESEADEEPEEVLEECLRRLSQPDAIMEPSIFDTIKRYFRAGGDPEEVVELLS   78 (584)
T ss_pred             CCchhhhcc--ccccccCCCCcccCccccccCCCChHHHHHHHHHhcCCCCeeeCchHHHHHHHHHHCCCCHHHHHHHHH
Confidence            899999655  69532222    344455555789999999999999999999999999999999999999999999999


Q ss_pred             hhhhhHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHhhCCcchhhhhhccCCCCcHHHHHHhcChhhHHHHHHHHH
Q psy15689         77 QNYKAVAQMANLVAEWLILGGVNVTEVQAMVENHLKDMILKTFDPKKADTIFTEEGETPAWLTEMIEHPTWRSLIYRLAE  156 (295)
Q Consensus        77 ~~Y~G~aQm~nLl~~WL~~~g~~~~ev~~~~e~~Lk~li~k~FDp~kaD~ift~~g~~p~WL~~MI~~~~WR~Liy~LaE  156 (295)
                      +||+|||||||||++||+++|+++++||+++++|||++|+|||||+|||+|||++|++|+||++||+||+||+|||+|||
T Consensus        79 ~~Y~g~aq~~~ll~~WL~~~~~~~~~v~~~~~~~lk~~i~~~FD~~k~D~ift~~~~~p~WL~~mi~~~~WR~liy~Lae  158 (584)
T PF04858_consen   79 ENYRGYAQMCNLLAEWLIDLGVSPEDVQEIVESHLKELIKKRFDPKKADTIFTEEGSTPAWLDEMIEHPRWRSLIYELAE  158 (584)
T ss_pred             HhcccHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhcChHHHHHHHhcCCCCChHHHHHhcCcHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hCCCccchHHHHHHHhhcchhhhhhhhhhHHhHHHHHHHHHHHHHHHhhcC-chhHHHHHHHHHHhhhccchhHHHHHHH
Q psy15689        157 EYPDCLMLNFTIKLISDAGFQREITSISTAAQQIEVFSRVLKTSISNFLES-SDDWQSSVEECAKMVCHGQHTYVYSQVL  235 (295)
Q Consensus       157 ~~p~cl~LnfaIk~IsdaG~q~EI~sv~taa~~~eVF~rvL~~~l~~~~~~-~d~~~~~~~el~km~C~sehTYlyaQ~l  235 (295)
                      +||||+|||||||+|||||||+||+||+|||+||+||+|||+++|.+++.. +|++++++++|+||||||+|||||||++
T Consensus       159 ~~p~~l~L~faik~IsdaG~~~Ei~s~~taa~~~~VF~~vl~~~i~~~~~~~~d~~~~~~~~l~k~~C~sehTYlyaQ~l  238 (584)
T PF04858_consen  159 RHPDCLFLNFAIKLISDAGYQHEITSVSTAAQQFEVFSRVLKDSISRFLAAGEDELQEAIAELKKMCCHSEHTYLYAQAL  238 (584)
T ss_pred             HCCCCHHHHHHHHHHHHcchHHHHHhHHHHHHhHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHhhcCCchHHHHHHH
Confidence            999999999999999999999999999999999999999999999999985 8899999999999999999999999999


Q ss_pred             HHHHhccCCchhHHHHHHHHHHHHHHhcCCCcchhHhhhcCCCCchhHHHHHHHHhccCC
Q psy15689        236 LQVLSLESKGGSKVKRLAQEITKCAQQSGHDVTPIIMALNGAAFYPQANQALSSMISRNS  295 (295)
Q Consensus       236 L~~L~~~~~g~~~~~rlsqele~~A~~~g~~v~~i~~~L~~~~~yp~~~~a~~sml~~~~  295 (295)
                      |+.|+|+++|++.++|||||||++|+++|++|++|+++|||+++||.+|+||++|||+|+
T Consensus       239 L~~L~~~~~~~~~~~rlsqELe~~A~~~~~~vt~i~~aL~~s~~~p~a~~ai~smLs~~~  298 (584)
T PF04858_consen  239 LHELSQESDGGSAMRRLSQELEREAAKRGHDVTDITLALNGSSSYPEACQAIASMLSSNA  298 (584)
T ss_pred             HHHHHhccccchHHHHHHHHHHHHHHHcCCCcHHHHHHHhcCccCchHHHHHHHHHhcCC
Confidence            999999999999999999999999999999999999999999999999999999999985

No homologue has been identified in Caenorhabditis elegans []. TH1 binds specifically to A-Raf kinase [].; GO: 0045892 negative regulation of transcription, DNA-dependent, 0005634 nucleus

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	295
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-08
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-04

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 53.7 bits (128), Expect = 3e-08
 Identities = 42/287 (14%), Positives = 99/287 (34%), Gaps = 80/287 (27%)

Query: 28  PMENPQEVLNECLEKFSTPDYIMEPGIFSQLKRYFQAGGNPEQV--IELLSQNYKAVAQM 85
               P   L + L +      ++  G+           G+ +    +++   +YK   +M
Sbjct: 132 SRLQPYLKLRQALLELRPAKNVLIDGV----------LGSGKTWVALDVC-LSYKVQCKM 180

Query: 86  ANLVAEWLILGGVNVTE-VQAMVENHLKDMILKTFDPKKADTIFTEEGETPAWLTEMIEH 144
              +  WL L   N  E V  M++      +L   DP      +T   +  + +   I  
Sbjct: 181 DFKIF-WLNLKNCNSPETVLEMLQK-----LLYQIDPN-----WTSRSDHSSNIKLRIH- 228

Query: 145 PTWRSLIYRL--AEEYPDCLMLNFTIKLISDAGFQREITSISTAAQQIEVF---SRVLKT 199
            + ++ + RL  ++ Y +CL       L+        + +    A+    F    ++L T
Sbjct: 229 -SIQAELRRLLKSKPYENCL-------LVLL-----NVQN----AKAWNAFNLSCKILLT 271

Query: 200 ----SISNFLESSDDWQSSVEECAKMVCHGQHTYVYSQVLLQVLSLESKGGSKVKRLAQE 255
                +++FL ++     S++  +  +   +       +LL+ L        + + L +E
Sbjct: 272 TRFKQVTDFLSAATTTHISLDHHSMTLTPDEVK----SLLLKYL------DCRPQDLPRE 321

Query: 256 ITKCAQQSGHDVTPIIMALNGAA---------FYPQANQ-ALSSMIS 292
           +            P  +++   +          +   N   L+++I 
Sbjct: 322 VLTTN--------PRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIE 360

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 41.8 bits (97), Expect = 2e-04
 Identities = 37/301 (12%), Positives = 90/301 (29%), Gaps = 100/301 (33%)

Query: 8   EQTHRWDQ-DMVDVDSDGGDDPMENPQEVLNECLEKFSTPDYIMEPGIFSQLKRY----- 61
           +    WD    V+ D             ++   L      +Y          K +     
Sbjct: 339 DGLATWDNWKHVNCD---------KLTTIIESSLNVLEPAEY---------RKMFDRLSV 380

Query: 62  FQAGGN-PEQVIELLSQNYKAVAQMANLVAEWLILGGVNVTEVQAMVEN-HLKDMILKTF 119
           F    + P  ++ L+                W     V  ++V  +V   H   ++ K  
Sbjct: 381 FPPSAHIPTILLSLI----------------W---FDVIKSDVMVVVNKLHKYSLVEK-- 419

Query: 120 DPKKA----DTIFTEEGETPAWLTEMIEHPTWRSLI--YRLAEEY------PDC------ 161
            PK++     +I+ E          +  H   RS++  Y + + +      P        
Sbjct: 420 QPKESTISIPSIYLELKVKLENEYAL--H---RSIVDHYNIPKTFDSDDLIPPYLDQYFY 474

Query: 162 ---------------------LMLNFTI---KLISDAGFQREITSISTAAQQIEVFSRVL 197
                                + L+F     K+  D+       SI    QQ++ +   +
Sbjct: 475 SHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYI 534

Query: 198 KTSISNFLESSDDWQSSVEECAKMVCHGQHTYVYSQVLLQVLSLESKGGSKVKRLAQEIT 257
             +   +    +     + +  + +   ++T      LL+ ++L ++  +  +   +++ 
Sbjct: 535 CDNDPKYERLVNAILDFLPKIEENLICSKYT-----DLLR-IALMAEDEAIFEEAHKQVQ 588

Query: 258 K 258
           +
Sbjct: 589 R 589

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00