Psyllid ID: psy158

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110------
Protein Sequence
MFVFIYSMPGYSLPIKERMLYSSCKAPLLENLHHLGLTIDKKLKKKKKKKKKKKKKKKFPYNSGSELTEEFLLEELHPKKTAERPKFDKPKGPPNRGAKRITKPQATPQFVKKLVD
Secondary Structure (PSIPRED)
cEEEEEEcccccccccHHHHHccccHHHHHHHHHccccHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHcccccccccccccccccccccccccccccccHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
cEEEEEEcccccccHHHHHccccccHHHHHHHHHccccccHHHHHHHHHHcccEEEEEEEEcccHHccHHHHHHHccccHHHHHHHHccccccccccccEEEcccccHHHHHHHcc
Coil and Loop (DISEMBL)
mfvfiysmpgyslpikermlyssckapllenlhhLGLTIDKKLKKKKKKKKKkkkkkkfpynsgseltEEFLLeelhpkktaerpkfdkpkgppnrgakritkpqatpQFVKKLVD
Flexible Loop (DISEMBL)
MFVFIYsmpgyslpIKERMLYSSCKAPLLEnlhhlgltidkklkkkkkkkkkkkkkkkfpynsgselteeflleelhpkktaerpkfdkpkgppnrgakritkpqatpqfvkklvd
Low Complexity Region (SEG)
MFVFIYSMPGYSLPIKERMLYSSCKAPLLENLHHLGLTIDkklkkkkkkkkkkkkkkkFPYNSGSelteeflleelHPKKTAERPKFDKPKGPPNRGAKRITKPQATPQFVKKLVD
Disordered region (IsUnstruct)
*FVFIYSMPGYSLPIKERMLYSSCKAPLLENLHHLGLTI*****************************************************************************
Disordered Region (DISOPRED)
MFVFIYSMPGYSLPIKERMLYSSCKAPLLENLHHLGLTIDKKLKKKKKKKKK**********************************************************VKKLV*
Disordered Region (DISEMBL)
MFVFIYSMPGYSLPIKERMLYSSCKAPLLENLHHLGLTIDK*******************YNSGSELTEEFLLEELHPKKTAERPKFDKPKGPPNRGAKRITKPQATPQFVKKLVD
Disordered Region (DISPRO)
MFVFIYSMPGYSLPIKERMLYSSCKAPLLENLHHLGLTIDKKLKKKKKKKKKKKKKKKFPYNSGSELTEEFLLEELHPKKTAERPKFDKPKGP**RGAKRIT**QATPQFVKKLVD
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MFVFIYSMPGYSLPIKERMLYSSCKAPLLENLHHLGLTIDKKLKKKKKKKKKKKKKKKFPYNSGSELTEEFLLEELHPKKTAERPKFDKPKGPPNRGAKRITKPQATPQFVKKLVD
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	116	2.2.26 [Sep-21-2011]
Q9VFM9	343	Twinfilin OS=Drosophila m	yes	N/A	0.767	0.259	0.561	1e-27
Q298X4	345	Twinfilin OS=Drosophila p	yes	N/A	0.801	0.269	0.522	4e-27
Q7QG28	343	Twinfilin OS=Anopheles ga	yes	N/A	0.767	0.259	0.533	4e-25
Q17A58	343	Twinfilin OS=Aedes aegypt	N/A	N/A	0.767	0.259	0.514	1e-24
Q56JV6	350	Twinfilin-1 OS=Bos taurus	yes	N/A	0.75	0.248	0.456	4e-18
Q5I082	350	Twinfilin-1 OS=Xenopus tr	yes	N/A	0.75	0.248	0.456	9e-18
Q5R7N2	350	Twinfilin-1 OS=Pongo abel	yes	N/A	0.75	0.248	0.446	1e-17
Q68F50	350	Twinfilin-1 OS=Xenopus la	N/A	N/A	0.741	0.245	0.451	2e-17
Q6GMH3	347	Twinfilin-2 OS=Danio reri	no	N/A	0.741	0.247	0.470	2e-17
Q91YR1	350	Twinfilin-1 OS=Mus muscul	yes	N/A	0.741	0.245	0.441	2e-17

>sp|Q9VFM9|TWF_DROME Twinfilin OS=Drosophila melanogaster GN=twf PE=1 SV=1

 Score =  121 bits (303), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 59/105 (56%), Positives = 72/105 (68%), Gaps = 16/105 (15%)

Query: 2   FVFIYSMPGYSLPIKERMLYSSCKAPLLENLHHLGLTIDKKLKKKKKKKKKKKKKKKFPY 61
           +VF+YSMPGYS  ++ERM+YSSCKAP L+ L  LG+ + KKL+                 
Sbjct: 253 YVFVYSMPGYSCSVRERMMYSSCKAPFLDELAALGVEVVKKLE----------------I 296

Query: 62  NSGSELTEEFLLEELHPKKTAERPKFDKPKGPPNRGAKRITKPQA 106
           +SGSELTE FL +ELHPKK   RP F KPKGPPNRGAKR+T+P A
Sbjct: 297 DSGSELTEAFLQDELHPKKILHRPAFAKPKGPPNRGAKRLTRPTA 341

Actin-binding protein involved in motile and morphological processes. Inhibits actin polymerization, likely by sequestering G-actin.
Drosophila melanogaster (taxid: 7227)

>sp|Q298X4|TWF_DROPS Twinfilin OS=Drosophila pseudoobscura pseudoobscura GN=twf PE=3 SV=2

 Score =  119 bits (299), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 57/109 (52%), Positives = 73/109 (66%), Gaps = 16/109 (14%)

Query: 2   FVFIYSMPGYSLPIKERMLYSSCKAPLLENLHHLGLTIDKKLKKKKKKKKKKKKKKKFPY 61
           +VF+YSMPGY+  ++ERM+YSSCKAP LE L  LG+ + KKL+                 
Sbjct: 253 YVFVYSMPGYTCSVRERMMYSSCKAPFLEQLAALGVDVVKKLE----------------I 296

Query: 62  NSGSELTEEFLLEELHPKKTAERPKFDKPKGPPNRGAKRITKPQATPQF 110
           ++G+ELTE +LL+ELHPKK   RP F KPKGPPNRGAKR+T+P    Q 
Sbjct: 297 DNGNELTEAYLLDELHPKKILHRPAFAKPKGPPNRGAKRLTRPSNEDQV 345

Actin-binding protein involved in motile and morphological processes. Inhibits actin polymerization, likely by sequestering G-actin.

Drosophila pseudoobscura pseudoobscura (taxid: 46245)

>sp|Q7QG28|TWF_ANOGA Twinfilin OS=Anopheles gambiae GN=twf PE=3 SV=2

 Score =  113 bits (282), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 56/105 (53%), Positives = 70/105 (66%), Gaps = 16/105 (15%)

Query: 3   VFIYSMPGYSLPIKERMLYSSCKAPLLENLHHLGLTIDKKLKKKKKKKKKKKKKKKFPYN 62
           VF+YSMPGYS  I+ERM+YSSCK P    +   G+ + KKL+                 +
Sbjct: 254 VFVYSMPGYSCSIRERMMYSSCKGPFSATIEKHGIQVAKKLE----------------ID 297

Query: 63  SGSELTEEFLLEELHPKKTAERPKFDKPKGPPNRGAKRITKPQAT 107
           +G+ELTEEFL EELHP+K   RP+F KPKGPP+RGAKR+TKPQA 
Sbjct: 298 NGAELTEEFLHEELHPRKLNLRPQFSKPKGPPSRGAKRLTKPQAV 342

Actin-binding protein involved in motile and morphological processes. Inhibits actin polymerization, likely by sequestering G-actin.

Anopheles gambiae (taxid: 7165)

>sp|Q17A58|TWF_AEDAE Twinfilin OS=Aedes aegypti GN=twf PE=3 SV=1

 Score =  111 bits (278), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 54/105 (51%), Positives = 69/105 (65%), Gaps = 16/105 (15%)

Query: 3   VFIYSMPGYSLPIKERMLYSSCKAPLLENLHHLGLTIDKKLKKKKKKKKKKKKKKKFPYN 62
           VF+YSMPGY+  I+ERM+YSSCK P    +   G+ I KK++                 +
Sbjct: 254 VFVYSMPGYTCSIRERMMYSSCKGPFSATIEKHGIEITKKIE----------------ID 297

Query: 63  SGSELTEEFLLEELHPKKTAERPKFDKPKGPPNRGAKRITKPQAT 107
           +G ELTEEF+ EELHP+K   RP+F KPKGPP+RGAKR+TKPQA 
Sbjct: 298 NGEELTEEFIYEELHPRKLNLRPQFSKPKGPPSRGAKRLTKPQAV 342

Actin-binding protein involved in motile and morphological processes. Inhibits actin polymerization, likely by sequestering G-actin.

Aedes aegypti (taxid: 7159)

>sp|Q56JV6|TWF1_BOVIN Twinfilin-1 OS=Bos taurus GN=TWF1 PE=2 SV=1

 Score = 90.1 bits (222), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 47/103 (45%), Positives = 64/103 (62%), Gaps = 16/103 (15%)

Query: 2   FVFIYSMPGYSLPIKERMLYSSCKAPLLENLHHLGLTIDKKLKKKKKKKKKKKKKKKFPY 61
            VFIYSMPGY+  I+ERMLYSSCK+PLLE        ++++L        +    +K   
Sbjct: 253 IVFIYSMPGYTCSIRERMLYSSCKSPLLE-------IVERQL--------QMDIIRKIEI 297

Query: 62  NSGSELTEEFLLEELHPKKTAERPKFDKPKGPPN-RGAKRITK 103
           ++G ELT +FL EE+HPK+ A +  F KPKGP   RG +RI +
Sbjct: 298 DNGDELTADFLYEEVHPKQHAHKQSFAKPKGPSGKRGIRRIIR 340

Actin-binding protein involved in motile and morphological processes. Inhibits actin polymerization, likely by sequestering G-actin. By capping the barbed ends of filaments, it also regulates motility. Seems to play an important role in clathrin-mediated endocytosis and distribution of endocytic organelles.

Bos taurus (taxid: 9913)

>sp|Q5I082|TWF1_XENTR Twinfilin-1 OS=Xenopus tropicalis GN=twf1 PE=2 SV=1

 Score = 89.0 bits (219), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 47/103 (45%), Positives = 64/103 (62%), Gaps = 16/103 (15%)

Query: 2   FVFIYSMPGYSLPIKERMLYSSCKAPLLENLHHLGLTIDKKLKKKKKKKKKKKKKKKFPY 61
           FVFIYSMPGY+  I+ERMLYSSCK+PLL+        I+ +L          +  +K   
Sbjct: 253 FVFIYSMPGYTCSIRERMLYSSCKSPLLD-------VIENRL--------LMEIARKIEI 297

Query: 62  NSGSELTEEFLLEELHPKKTAERPKFDKPKGPPN-RGAKRITK 103
           ++G ELT +FL EE+HPK+ A +  F KPKGP   RG +R+ +
Sbjct: 298 DNGDELTPDFLYEEVHPKQHAHKQNFAKPKGPAGKRGIRRLIR 340

Actin-binding protein involved in motile and morphological processes. Inhibits actin polymerization, likely by sequestering G-actin.

Xenopus tropicalis (taxid: 8364)

>sp|Q5R7N2|TWF1_PONAB Twinfilin-1 OS=Pongo abelii GN=TWF1 PE=2 SV=1

 Score = 88.6 bits (218), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 46/103 (44%), Positives = 64/103 (62%), Gaps = 16/103 (15%)

Query: 2   FVFIYSMPGYSLPIKERMLYSSCKAPLLENLHHLGLTIDKKLKKKKKKKKKKKKKKKFPY 61
            VFIYSMPGY+  I+ERMLYSSCK+PLLE        ++++L        +    +K   
Sbjct: 253 IVFIYSMPGYTCSIRERMLYSSCKSPLLE-------IVERQL--------QMGVIRKIEI 297

Query: 62  NSGSELTEEFLLEELHPKKTAERPKFDKPKGPPN-RGAKRITK 103
           ++G ELT +FL EE+HPK+ A +  F KPKGP   RG +R+ +
Sbjct: 298 DNGDELTADFLYEEVHPKQHAHKQSFAKPKGPAGKRGIRRLIR 340

Actin-binding protein involved in motile and morphological processes. Inhibits actin polymerization, likely by sequestering G-actin. By capping the barbed ends of filaments, it also regulates motility. Seems to play an important role in clathrin-mediated endocytosis and distribution of endocytic organelles.

Pongo abelii (taxid: 9601)

>sp|Q68F50|TWF1_XENLA Twinfilin-1 OS=Xenopus laevis GN=twf1 PE=2 SV=1

 Score = 87.8 bits (216), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 47/104 (45%), Positives = 65/104 (62%), Gaps = 18/104 (17%)

Query: 2   FVFIYSMPGYSLPIKERMLYSSCKAPLLENLHH-LGLTIDKKLKKKKKKKKKKKKKKKFP 60
           FVFIYSMPGY+  I+ERMLYSSCK PLL+ + + L + I +K++                
Sbjct: 253 FVFIYSMPGYTCSIRERMLYSSCKNPLLDAIENRLLMEIARKIE---------------- 296

Query: 61  YNSGSELTEEFLLEELHPKKTAERPKFDKPKGPPN-RGAKRITK 103
            ++G ELT +FL EE+HPK+ A +  F KPKGP   RG +R+ +
Sbjct: 297 IDNGDELTPDFLYEEVHPKQHAHKQNFAKPKGPAGKRGIRRLIR 340

Actin-binding protein involved in motile and morphological processes. Inhibits actin polymerization, likely by sequestering G-actin.

Xenopus laevis (taxid: 8355)

>sp|Q6GMH3|TWF2_DANRE Twinfilin-2 OS=Danio rerio GN=twf2 PE=2 SV=1

 Score = 87.8 bits (216), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 48/102 (47%), Positives = 62/102 (60%), Gaps = 16/102 (15%)

Query: 3   VFIYSMPGYSLPIKERMLYSSCKAPLLENLHHLGLTIDKKLKKKKKKKKKKKKKKKFPYN 62
           VFIYSMPGYS  IKERMLYSSCK+ LL+ +               ++    +  KK   +
Sbjct: 252 VFIYSMPGYSCSIKERMLYSSCKSRLLDEV---------------ERDFHLEVAKKLEID 296

Query: 63  SGSELTEEFLLEELHPKKTAERPKFDKPKGPPN-RGAKRITK 103
           SG ELTEE+L +E+HPK+ A +  F KP+GP   RG KR+ K
Sbjct: 297 SGEELTEEYLYDEVHPKQHAHKQAFAKPRGPAGKRGNKRLIK 338

Actin-binding protein involved in motile and morphological processes. Inhibits actin polymerization, likely by sequestering G-actin.

Danio rerio (taxid: 7955)

>sp|Q91YR1|TWF1_MOUSE Twinfilin-1 OS=Mus musculus GN=Twf1 PE=1 SV=2

 Score = 87.8 bits (216), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 45/102 (44%), Positives = 64/102 (62%), Gaps = 16/102 (15%)

Query: 3   VFIYSMPGYSLPIKERMLYSSCKAPLLENLHHLGLTIDKKLKKKKKKKKKKKKKKKFPYN 62
           VFIYSMPGY+  I+ERMLYSSCK+PLLE        ++++L        +    +K   +
Sbjct: 254 VFIYSMPGYTCSIRERMLYSSCKSPLLE-------IVERQL--------QMDVIRKIEID 298

Query: 63  SGSELTEEFLLEELHPKKTAERPKFDKPKGPPN-RGAKRITK 103
           +G ELT +FL +E+HPK+ A +  F KPKGP   RG +R+ +
Sbjct: 299 NGDELTADFLYDEVHPKQHAHKQSFAKPKGPAGKRGIRRLIR 340

Actin-binding protein involved in motile and morphological processes. Inhibits actin polymerization, likely by sequestering G-actin. By capping the barbed ends of filaments, it also regulates motility. Seems to play an important role in clathrin-mediated endocytosis and distribution of endocytic organelles.

Mus musculus (taxid: 10090)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	116
195064702	342	GH19702 [Drosophila grimshawi] gi|193892	0.75	0.254	0.563	1e-26
195392242	345	GJ24628 [Drosophila virilis] gi|19415285	0.75	0.252	0.592	2e-26
156537411	347	PREDICTED: twinfilin-like isoform 1 [Nas	0.775	0.259	0.603	3e-26
350411244	350	PREDICTED: twinfilin-like [Bombus impati	0.758	0.251	0.615	4e-26
340729882	350	PREDICTED: LOW QUALITY PROTEIN: twinfili	0.758	0.251	0.615	4e-26
195329086	343	GM24151 [Drosophila sechellia] gi|194120	0.767	0.259	0.561	5e-26
91090079	344	PREDICTED: similar to twinfilin [Triboli	0.758	0.255	0.605	5e-26
21358413	343	twinfilin [Drosophila melanogaster] gi|1	0.767	0.259	0.561	5e-26
195570995	341	GD18947 [Drosophila simulans] gi|1941994	0.767	0.260	0.561	6e-26
195446195	345	GK12190 [Drosophila willistoni] gi|19416	0.75	0.252	0.572	8e-26

>gi|195064702|ref|XP_001996617.1| GH19702 [Drosophila grimshawi] gi|193892749|gb|EDV91615.1| GH19702 [Drosophila grimshawi]

 Score =  123 bits (309), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 58/103 (56%), Positives = 71/103 (68%), Gaps = 16/103 (15%)

Query: 2   FVFIYSMPGYSLPIKERMLYSSCKAPLLENLHHLGLTIDKKLKKKKKKKKKKKKKKKFPY 61
           FVFIYSMPGYS  ++ERM+YSSCKAP +E L  LG+ +DKKL+                 
Sbjct: 250 FVFIYSMPGYSCSVRERMMYSSCKAPFIEQLAELGINVDKKLE----------------I 293

Query: 62  NSGSELTEEFLLEELHPKKTAERPKFDKPKGPPNRGAKRITKP 104
           ++G ELTE +L +ELHPKK   RP F KPKGPPNRGAKR+T+P
Sbjct: 294 DAGDELTEAYLQDELHPKKILHRPAFAKPKGPPNRGAKRLTRP 336

Source: Drosophila grimshawi

Species: Drosophila grimshawi

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195392242|ref|XP_002054768.1| GJ24628 [Drosophila virilis] gi|194152854|gb|EDW68288.1| GJ24628 [Drosophila virilis]

 Score =  122 bits (307), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 61/103 (59%), Positives = 70/103 (67%), Gaps = 16/103 (15%)

Query: 2   FVFIYSMPGYSLPIKERMLYSSCKAPLLENLHHLGLTIDKKLKKKKKKKKKKKKKKKFPY 61
           FVFIYSMPGYS  ++ERM+YSSCKAP LE L   G+ I KKL+                 
Sbjct: 253 FVFIYSMPGYSCSVRERMMYSSCKAPFLEELSAYGVEIAKKLE----------------I 296

Query: 62  NSGSELTEEFLLEELHPKKTAERPKFDKPKGPPNRGAKRITKP 104
           +SG ELTEE+L EELHPKK   RP F KPKGPPNRGAKR+T+P
Sbjct: 297 DSGDELTEEYLQEELHPKKILHRPAFAKPKGPPNRGAKRLTRP 339

Source: Drosophila virilis

Species: Drosophila virilis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|156537411|ref|XP_001606836.1| PREDICTED: twinfilin-like isoform 1 [Nasonia vitripennis]

 Score =  122 bits (306), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 64/106 (60%), Positives = 70/106 (66%), Gaps = 16/106 (15%)

Query: 2   FVFIYSMPGYSLPIKERMLYSSCKAPLLENLHHLGLTIDKKLKKKKKKKKKKKKKKKFPY 61
            VFIYSMPGYS  I+ERMLYSSCKAPLLE +  LG+TI KKL+                 
Sbjct: 254 IVFIYSMPGYSCTIRERMLYSSCKAPLLELIQSLGVTIAKKLE----------------I 297

Query: 62  NSGSELTEEFLLEELHPKKTAERPKFDKPKGPPNRGAKRITKPQAT 107
           + G ELTE FL +ELHPK    RPKF KPKGPPNRG KRITK Q T
Sbjct: 298 DDGMELTEAFLQDELHPKVNLHRPKFAKPKGPPNRGGKRITKVQET 343

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350411244|ref|XP_003489283.1| PREDICTED: twinfilin-like [Bombus impatiens]

 Score =  122 bits (305), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 64/104 (61%), Positives = 71/104 (68%), Gaps = 16/104 (15%)

Query: 2   FVFIYSMPGYSLPIKERMLYSSCKAPLLENLHHLGLTIDKKLKKKKKKKKKKKKKKKFPY 61
            VFIYSMPGYS  IKERMLYSSCKAPLLE +  LG+TI KKL+                 
Sbjct: 254 IVFIYSMPGYSCSIKERMLYSSCKAPLLELIQSLGVTITKKLE----------------I 297

Query: 62  NSGSELTEEFLLEELHPKKTAERPKFDKPKGPPNRGAKRITKPQ 105
           + G ELTEEFL EELHPK +  +PKF KPKGPP RGAKR+TK Q
Sbjct: 298 DDGRELTEEFLQEELHPKISLHQPKFAKPKGPPGRGAKRLTKVQ 341

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340729882|ref|XP_003403223.1| PREDICTED: LOW QUALITY PROTEIN: twinfilin-like [Bombus terrestris]

 Score =  121 bits (304), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 64/104 (61%), Positives = 71/104 (68%), Gaps = 16/104 (15%)

Query: 2   FVFIYSMPGYSLPIKERMLYSSCKAPLLENLHHLGLTIDKKLKKKKKKKKKKKKKKKFPY 61
            VFIYSMPGYS  IKERMLYSSCKAPLLE +  LG+TI KKL+                 
Sbjct: 254 IVFIYSMPGYSCSIKERMLYSSCKAPLLELIQSLGVTITKKLE----------------I 297

Query: 62  NSGSELTEEFLLEELHPKKTAERPKFDKPKGPPNRGAKRITKPQ 105
           + G ELTEEFL EELHPK +  +PKF KPKGPP RGAKR+TK Q
Sbjct: 298 DDGRELTEEFLQEELHPKISLHQPKFAKPKGPPGRGAKRLTKVQ 341

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195329086|ref|XP_002031242.1| GM24151 [Drosophila sechellia] gi|194120185|gb|EDW42228.1| GM24151 [Drosophila sechellia]

 Score =  121 bits (304), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 59/105 (56%), Positives = 72/105 (68%), Gaps = 16/105 (15%)

Query: 2   FVFIYSMPGYSLPIKERMLYSSCKAPLLENLHHLGLTIDKKLKKKKKKKKKKKKKKKFPY 61
           +VF+YSMPGYS  ++ERM+YSSCKAP L+ L  LG+ + KKL+                 
Sbjct: 253 YVFVYSMPGYSCSVRERMMYSSCKAPFLDELAALGVEVVKKLE----------------I 296

Query: 62  NSGSELTEEFLLEELHPKKTAERPKFDKPKGPPNRGAKRITKPQA 106
           +SGSELTE FL +ELHPKK   RP F KPKGPPNRGAKR+T+P A
Sbjct: 297 DSGSELTEAFLQDELHPKKILHRPAFAKPKGPPNRGAKRLTRPTA 341

Source: Drosophila sechellia

Species: Drosophila sechellia

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|91090079|ref|XP_969933.1| PREDICTED: similar to twinfilin [Tribolium castaneum] gi|270013504|gb|EFA09952.1| hypothetical protein TcasGA2_TC012105 [Tribolium castaneum]

 Score =  121 bits (303), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 63/104 (60%), Positives = 70/104 (67%), Gaps = 16/104 (15%)

Query: 2   FVFIYSMPGYSLPIKERMLYSSCKAPLLENLHHLGLTIDKKLKKKKKKKKKKKKKKKFPY 61
            VFIYSMPGY+ PIKERMLYSSCK PL + +  LGL I KKL+                 
Sbjct: 253 IVFIYSMPGYNCPIKERMLYSSCKNPLTDTITSLGLEIVKKLE----------------I 296

Query: 62  NSGSELTEEFLLEELHPKKTAERPKFDKPKGPPNRGAKRITKPQ 105
           +SGSELTEEFL EE+HP K   RPKF KPKGPPNRG KR+TK Q
Sbjct: 297 DSGSELTEEFLYEEIHPTKNLHRPKFAKPKGPPNRGPKRMTKSQ 340

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|21358413|ref|NP_650338.1| twinfilin [Drosophila melanogaster] gi|194900685|ref|XP_001979886.1| GG16839 [Drosophila erecta] gi|74868844|sp|Q9VFM9.1|TWF_DROME RecName: Full=Twinfilin gi|7299845|gb|AAF55022.1| twinfilin [Drosophila melanogaster] gi|17862562|gb|AAL39758.1| LD37470p [Drosophila melanogaster] gi|18621127|emb|CAD22537.1| twinfilin [Drosophila melanogaster] gi|190651589|gb|EDV48844.1| GG16839 [Drosophila erecta] gi|220956446|gb|ACL90766.1| twf-PA [synthetic construct]

 Score =  121 bits (303), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 59/105 (56%), Positives = 72/105 (68%), Gaps = 16/105 (15%)

Query: 2   FVFIYSMPGYSLPIKERMLYSSCKAPLLENLHHLGLTIDKKLKKKKKKKKKKKKKKKFPY 61
           +VF+YSMPGYS  ++ERM+YSSCKAP L+ L  LG+ + KKL+                 
Sbjct: 253 YVFVYSMPGYSCSVRERMMYSSCKAPFLDELAALGVEVVKKLE----------------I 296

Query: 62  NSGSELTEEFLLEELHPKKTAERPKFDKPKGPPNRGAKRITKPQA 106
           +SGSELTE FL +ELHPKK   RP F KPKGPPNRGAKR+T+P A
Sbjct: 297 DSGSELTEAFLQDELHPKKILHRPAFAKPKGPPNRGAKRLTRPTA 341

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195570995|ref|XP_002103489.1| GD18947 [Drosophila simulans] gi|194199416|gb|EDX12992.1| GD18947 [Drosophila simulans]

 Score =  121 bits (303), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 59/105 (56%), Positives = 72/105 (68%), Gaps = 16/105 (15%)

Query: 2   FVFIYSMPGYSLPIKERMLYSSCKAPLLENLHHLGLTIDKKLKKKKKKKKKKKKKKKFPY 61
           +VF+YSMPGYS  ++ERM+YSSCKAP L+ L  LG+ + KKL+                 
Sbjct: 251 YVFVYSMPGYSCSVRERMMYSSCKAPFLDELAALGVEVVKKLE----------------I 294

Query: 62  NSGSELTEEFLLEELHPKKTAERPKFDKPKGPPNRGAKRITKPQA 106
           +SGSELTE FL +ELHPKK   RP F KPKGPPNRGAKR+T+P A
Sbjct: 295 DSGSELTEAFLQDELHPKKILHRPAFAKPKGPPNRGAKRLTRPTA 339

Source: Drosophila simulans

Species: Drosophila simulans

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195446195|ref|XP_002070671.1| GK12190 [Drosophila willistoni] gi|194166756|gb|EDW81657.1| GK12190 [Drosophila willistoni]

 Score =  120 bits (302), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 59/103 (57%), Positives = 72/103 (69%), Gaps = 16/103 (15%)

Query: 2   FVFIYSMPGYSLPIKERMLYSSCKAPLLENLHHLGLTIDKKLKKKKKKKKKKKKKKKFPY 61
           +VFIYSMPGY+  ++ERM+YSSCKAP LE L  LG+ + KKL+                 
Sbjct: 253 YVFIYSMPGYNCSVRERMMYSSCKAPFLEELAALGVEVIKKLE----------------I 296

Query: 62  NSGSELTEEFLLEELHPKKTAERPKFDKPKGPPNRGAKRITKP 104
           +SGSELTE +LL+ELHPKK   RP F KPKGPPNRGAKR+T+P
Sbjct: 297 DSGSELTEAYLLDELHPKKILYRPAFAKPKGPPNRGAKRLTRP 339

Source: Drosophila willistoni

Species: Drosophila willistoni

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	116
FB|FBgn0038206	343	twf "twinfilin" [Drosophila me	0.327	0.110	0.605	3.4e-20
UNIPROTKB|Q298X4	345	twf "Twinfilin" [Drosophila ps	0.327	0.110	0.605	2.4e-19
UNIPROTKB|Q56JV6	350	TWF1 "Twinfilin-1" [Bos taurus	0.241	0.08	0.821	1.1e-12
UNIPROTKB|E1C198	350	TWF1 "Uncharacterized protein"	0.241	0.08	0.821	1.7e-12
UNIPROTKB|J9NRP8	350	TWF1 "Uncharacterized protein"	0.241	0.08	0.821	1.7e-12
UNIPROTKB|F1SGZ8	350	TWF1 "Uncharacterized protein"	0.241	0.08	0.821	1.7e-12
MGI|MGI:1100520	350	Twf1 "twinfilin, actin-binding	0.241	0.08	0.821	1.7e-12
UNIPROTKB|F1PFK0	357	TWF1 "Uncharacterized protein"	0.241	0.078	0.821	1.8e-12
ZFIN|ZDB-GENE-030131-4402	350	twf1a "twinfilin, actin-bindin	0.241	0.08	0.821	2.3e-12
RGD|1311872	350	Twf1 "twinfilin, actin-binding	0.241	0.08	0.785	3.6e-12

FB|FBgn0038206 twf "twinfilin" [Drosophila melanogaster (taxid:7227)]

 Score = 135 (52.6 bits), Expect = 3.4e-20, Sum P(2) = 3.4e-20
 Identities = 23/38 (60%), Positives = 31/38 (81%)

Query:     2 FVFIYSMPGYSLPIKERMLYSSCKAPLLENLHHLGLTI 39
             +VF+YSMPGYS  ++ERM+YSSCKAP L+ L  LG+ +
Sbjct:   253 YVFVYSMPGYSCSVRERMMYSSCKAPFLDELAALGVEV 290

GO:0004713 "protein tyrosine kinase activity" evidence=ISS

GO:0030042 "actin filament depolymerization" evidence=IDA

GO:0008407 "chaeta morphogenesis" evidence=IMP

GO:0003779 "actin binding" evidence=IEA;NAS

GO:0010591 "regulation of lamellipodium assembly" evidence=IMP

GO:0016319 "mushroom body development" evidence=IMP

GO:0007298 "border follicle cell migration" evidence=IMP

GO:0007274 "neuromuscular synaptic transmission" evidence=IMP

GO:0005737 "cytoplasm" evidence=IDA

GO:0048488 "synaptic vesicle endocytosis" evidence=IMP

UNIPROTKB|Q298X4 twf "Twinfilin" [Drosophila pseudoobscura pseudoobscura (taxid:46245)]

 Score = 135 (52.6 bits), Expect = 2.4e-19, Sum P(2) = 2.4e-19
 Identities = 23/38 (60%), Positives = 31/38 (81%)

Query:     2 FVFIYSMPGYSLPIKERMLYSSCKAPLLENLHHLGLTI 39
             +VF+YSMPGY+  ++ERM+YSSCKAP LE L  LG+ +
Sbjct:   253 YVFVYSMPGYTCSVRERMMYSSCKAPFLEQLAALGVDV 290

GO:0003779 "actin binding" evidence=ISS

GO:0005737 "cytoplasm" evidence=ISS

GO:0005886 "plasma membrane" evidence=ISS

GO:0030833 "regulation of actin filament polymerization" evidence=ISS

UNIPROTKB|Q56JV6 TWF1 "Twinfilin-1" [Bos taurus (taxid:9913)]

 Score = 124 (48.7 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
 Identities = 23/28 (82%), Positives = 26/28 (92%)

Query:     3 VFIYSMPGYSLPIKERMLYSSCKAPLLE 30
             VFIYSMPGY+  I+ERMLYSSCK+PLLE
Sbjct:   254 VFIYSMPGYTCSIRERMLYSSCKSPLLE 281

GO:0051016 "barbed-end actin filament capping" evidence=IEA

GO:0048471 "perinuclear region of cytoplasm" evidence=IEA

GO:0043538 "regulation of actin phosphorylation" evidence=IEA

GO:0042989 "sequestering of actin monomers" evidence=IEA

GO:0032587 "ruffle membrane" evidence=IEA

GO:0030175 "filopodium" evidence=IEA

GO:0030016 "myofibril" evidence=IEA

GO:0015629 "actin cytoskeleton" evidence=IEA

GO:0005911 "cell-cell junction" evidence=IEA

GO:0005546 "phosphatidylinositol-4,5-bisphosphate binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0003785 "actin monomer binding" evidence=IEA

UNIPROTKB|E1C198 TWF1 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 124 (48.7 bits), Expect = 1.7e-12, Sum P(2) = 1.7e-12
 Identities = 23/28 (82%), Positives = 26/28 (92%)

Query:     3 VFIYSMPGYSLPIKERMLYSSCKAPLLE 30
             VFIYSMPGY+  I+ERMLYSSCK+PLLE
Sbjct:   254 VFIYSMPGYTCSIRERMLYSSCKSPLLE 281

GO:0003785 "actin monomer binding" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005546 "phosphatidylinositol-4,5-bisphosphate binding" evidence=IEA

GO:0005911 "cell-cell junction" evidence=IEA

GO:0015629 "actin cytoskeleton" evidence=IEA

GO:0030016 "myofibril" evidence=IEA

GO:0030175 "filopodium" evidence=IEA

GO:0032587 "ruffle membrane" evidence=IEA

GO:0042989 "sequestering of actin monomers" evidence=IEA

GO:0043538 "regulation of actin phosphorylation" evidence=IEA

GO:0048471 "perinuclear region of cytoplasm" evidence=IEA

GO:0051016 "barbed-end actin filament capping" evidence=IEA

UNIPROTKB|J9NRP8 TWF1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 124 (48.7 bits), Expect = 1.7e-12, Sum P(2) = 1.7e-12
 Identities = 23/28 (82%), Positives = 26/28 (92%)

Query:     3 VFIYSMPGYSLPIKERMLYSSCKAPLLE 30
             VFIYSMPGY+  I+ERMLYSSCK+PLLE
Sbjct:   254 VFIYSMPGYTCSIRERMLYSSCKSPLLE 281

GO:0005622 "intracellular" evidence=IEA

GO:0003779 "actin binding" evidence=IEA

UNIPROTKB|F1SGZ8 TWF1 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 124 (48.7 bits), Expect = 1.7e-12, Sum P(2) = 1.7e-12
 Identities = 23/28 (82%), Positives = 26/28 (92%)

Query:     3 VFIYSMPGYSLPIKERMLYSSCKAPLLE 30
             VFIYSMPGY+  I+ERMLYSSCK+PLLE
Sbjct:   254 VFIYSMPGYTCSIRERMLYSSCKSPLLE 281

GO:0051016 "barbed-end actin filament capping" evidence=IEA

GO:0048471 "perinuclear region of cytoplasm" evidence=IEA

GO:0043538 "regulation of actin phosphorylation" evidence=IEA

GO:0042989 "sequestering of actin monomers" evidence=IEA

GO:0032587 "ruffle membrane" evidence=IEA

GO:0030175 "filopodium" evidence=IEA

GO:0030016 "myofibril" evidence=IEA

GO:0015629 "actin cytoskeleton" evidence=IEA

GO:0005911 "cell-cell junction" evidence=IEA

GO:0005546 "phosphatidylinositol-4,5-bisphosphate binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0003785 "actin monomer binding" evidence=IEA

MGI|MGI:1100520 Twf1 "twinfilin, actin-binding protein, homolog 1 (Drosophila)" [Mus musculus (taxid:10090)]

 Score = 124 (48.7 bits), Expect = 1.7e-12, Sum P(2) = 1.7e-12
 Identities = 23/28 (82%), Positives = 26/28 (92%)

Query:     3 VFIYSMPGYSLPIKERMLYSSCKAPLLE 30
             VFIYSMPGY+  I+ERMLYSSCK+PLLE
Sbjct:   254 VFIYSMPGYTCSIRERMLYSSCKSPLLE 281

GO:0003779 "actin binding" evidence=IEA

GO:0003785 "actin monomer binding" evidence=IDA

GO:0004713 "protein tyrosine kinase activity" evidence=IDA

GO:0005524 "ATP binding" evidence=ISO

GO:0005546 "phosphatidylinositol-4,5-bisphosphate binding" evidence=IDA

GO:0005622 "intracellular" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005856 "cytoskeleton" evidence=IEA

GO:0005911 "cell-cell junction" evidence=IDA

GO:0006468 "protein phosphorylation" evidence=IDA

GO:0015629 "actin cytoskeleton" evidence=IDA

GO:0030016 "myofibril" evidence=IDA

GO:0030175 "filopodium" evidence=IDA

GO:0030837 "negative regulation of actin filament polymerization" evidence=IDA

GO:0032587 "ruffle membrane" evidence=IDA

GO:0042989 "sequestering of actin monomers" evidence=IDA

GO:0043538 "regulation of actin phosphorylation" evidence=ISO

GO:0048471 "perinuclear region of cytoplasm" evidence=IDA

GO:0051016 "barbed-end actin filament capping" evidence=IDA

UNIPROTKB|F1PFK0 TWF1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 124 (48.7 bits), Expect = 1.8e-12, Sum P(2) = 1.8e-12
 Identities = 23/28 (82%), Positives = 26/28 (92%)

Query:     3 VFIYSMPGYSLPIKERMLYSSCKAPLLE 30
             VFIYSMPGY+  I+ERMLYSSCK+PLLE
Sbjct:   261 VFIYSMPGYTCSIRERMLYSSCKSPLLE 288

GO:0005622 "intracellular" evidence=IEA

GO:0003779 "actin binding" evidence=IEA

ZFIN|ZDB-GENE-030131-4402 twf1a "twinfilin, actin-binding protein, homolog 1a" [Danio rerio (taxid:7955)]

 Score = 120 (47.3 bits), Expect = 2.3e-12, Sum P(2) = 2.3e-12
 Identities = 23/28 (82%), Positives = 25/28 (89%)

Query:     3 VFIYSMPGYSLPIKERMLYSSCKAPLLE 30
             VFIYSMPGYS  I+ERMLYSSCK PLL+
Sbjct:   254 VFIYSMPGYSCGIRERMLYSSCKNPLLD 281

GO:0005622 "intracellular" evidence=IEA

GO:0003779 "actin binding" evidence=IEA

GO:0008150 "biological_process" evidence=ND

RGD|1311872 Twf1 "twinfilin, actin-binding protein, homolog 1 (Drosophila)" [Rattus norvegicus (taxid:10116)]

 Score = 121 (47.7 bits), Expect = 3.6e-12, Sum P(2) = 3.6e-12
 Identities = 22/28 (78%), Positives = 26/28 (92%)

Query:     3 VFIYSMPGYSLPIKERMLYSSCKAPLLE 30
             VFIYSMPGY+  I+ERMLYSSCK+PLL+
Sbjct:   254 VFIYSMPGYTCSIRERMLYSSCKSPLLD 281

GO:0003785 "actin monomer binding" evidence=IEA;ISO

GO:0004713 "protein tyrosine kinase activity" evidence=IEA;ISO

GO:0005524 "ATP binding" evidence=IEA;ISO

GO:0005546 "phosphatidylinositol-4,5-bisphosphate binding" evidence=IEA;ISO

GO:0005737 "cytoplasm" evidence=ISO

GO:0005911 "cell-cell junction" evidence=IEA;ISO

GO:0006468 "protein phosphorylation" evidence=ISO

GO:0015629 "actin cytoskeleton" evidence=IEA;ISO

GO:0030016 "myofibril" evidence=IEA;ISO

GO:0030175 "filopodium" evidence=IEA;ISO

GO:0030837 "negative regulation of actin filament polymerization" evidence=ISO

GO:0032587 "ruffle membrane" evidence=IEA;ISO

GO:0042989 "sequestering of actin monomers" evidence=IEA;ISO

GO:0043538 "regulation of actin phosphorylation" evidence=IEA;ISO

GO:0048471 "perinuclear region of cytoplasm" evidence=IEA;ISO

GO:0051016 "barbed-end actin filament capping" evidence=IEA;ISO

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q298X4	TWF_DROPS	No assigned EC number	0.5229	0.8017	0.2695	yes	N/A
Q7QG28	TWF_ANOGA	No assigned EC number	0.5333	0.7672	0.2594	yes	N/A
Q9VFM9	TWF_DROME	No assigned EC number	0.5619	0.7672	0.2594	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	116
cd11284	132	cd11284, ADF_Twf-C_like, C-terminal ADF domain of	1e-19
cd00013	97	cd00013, ADF_gelsolin, Actin depolymerization fact	1e-05
smart00102	127	smart00102, ADF, Actin depolymerisation factor/cof	6e-05

>gnl|CDD|200440 cd11284, ADF_Twf-C_like, C-terminal ADF domain of twinfilin and related proteins

 Score = 77.7 bits (192), Expect = 1e-19
 Identities = 28/76 (36%), Positives = 36/76 (47%), Gaps = 18/76 (23%)

Query: 1   MFVFIYSMPGYSLPIKERMLYSSCKAPLLENL-HHLGLTIDKKLKKKKKKKKKKKKKKKF 59
             VFIYS P  S  +KERMLY+S K+ LL +      + IDKK++               
Sbjct: 74  SVVFIYSCPSGS-KVKERMLYASSKSGLLNHAEDEGKIEIDKKIE--------------- 117

Query: 60  PYNSGSELTEEFLLEE 75
                 ELTE FL +E
Sbjct: 118 -IGDPDELTESFLSDE 132

Actin depolymerization factor/cofilin-like domains (ADF domains) are present in a family of essential eukaryotic actin regulatory proteins. Twinfilin contains two ADF domains, and inhibits the assembly of actin filaments by strongly interacting with monomeric ADP-actin (ADP-G-actin) in a 1:1 stochiometry (with it's C-terminal ADF domain, Twf-C) and inhibiting the actin monomer's nucleotide exchange. Mammalian twinfilin may also cap the barbed ends of F-actin filaments and prevent further assembly (or disassembly), in a process which requires both ADF domains. The N-terminal ADF domain (Twf-N) binds G-actin with a lower affinity than Twf-C; Twf-C can also bind F-actin. During capping, Twf-N may interact with the terminal actin subunit, and Twf-C may bind between two adjacent subunits at the side of the filament. Length = 132

>gnl|CDD|200435 cd00013, ADF_gelsolin, Actin depolymerization factor/cofilin- and gelsolin-like domains

 Score = 40.5 bits (95), Expect = 1e-05
 Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 1/34 (2%)

Query: 2  FVFIYSMPGYSLPIKERMLYSSCKAPLLENLHHL 35
          FVFI  +P     IK++M+Y++ K  L E L  L
Sbjct: 55 FVFISWIPDGV-SIKQKMVYATNKQTLKEALFGL 87

Actin depolymerization factor/cofilin-like domains are present in a family of essential eukaryotic actin regulatory proteins; these proteins enhance the turnover rate of actin and interact with actin monomers as well as actin filaments. Length = 97

>gnl|CDD|214516 smart00102, ADF, Actin depolymerisation factor/cofilin -like domains

 Score = 39.2 bits (92), Expect = 6e-05
 Identities = 19/76 (25%), Positives = 28/76 (36%), Gaps = 21/76 (27%)

Query: 2   FVFIYSMPGYSLPIKERMLYSSCKAPLLENLHHLGLTIDKKLKKKKKKKKKKKKKKKFPY 61
            VFI+  P    P+K +MLY+S K  L + L                       + +   
Sbjct: 73  IVFIFWSPD-GAPVKSKMLYASSKDTLKKEL--------------------GGIQVEVQA 111

Query: 62  NSGSELTEEFLLEELH 77
               +L EE L E+L 
Sbjct: 112 TDEDDLDEEALKEKLK 127

Severs actin filaments and binds to actin monomers. Length = 127

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	116
KOG1747|consensus	342		99.96
PLN03216	141	actin depolymerizing factor; Provisional	99.66
PF00241	127	Cofilin_ADF: Cofilin/tropomyosin-type actin-bindin	99.63
cd00013	132	ADF Actin depolymerisation factor/cofilin -like do	99.62
smart00102	127	ADF Actin depolymerisation factor/cofilin -like do	99.6
KOG1735|consensus	146		99.44
PTZ00152	122	cofilin/actin-depolymerizing factor 1-like protein	99.35
KOG1736|consensus	143		98.85
KOG1747|consensus	342		98.65
KOG3655|consensus	484		96.1

>KOG1747|consensus

Probab=99.96  E-value=7e-30  Score=213.41  Aligned_cols=92  Identities=54%  Similarity=0.956  Sum_probs=88.6

Q ss_pred             CEEEEEecCCCCCCcccchhhhhccHHHHHHhhh-cCceeeehhhhchhhHhhhhhcCcccCCCCCcCCHHHHHHHhCCC
Q psy158            1 MFVFIYSMPGYSLPIKERMLYSSCKAPLLENLHH-LGLTIDKKLKKKKKKKKKKKKKKKFPYNSGSELTEEFLLEELHPK   79 (116)
Q Consensus         1 k~vFIys~P~~s~pIKeRMlYSS~K~~l~~~l~~-~Gl~i~kkle~~~~~~~~~~~~~~~~~nd~sELtee~l~eel~P~   79 (116)
                      .+||||+||+|+|.||+||||||||++|++.+.. +||.|++++|                ++|++|||+++|.|++||.
T Consensus       250 s~~FIYS~P~~~~sVKeRMlYSScK~~fLd~~k~~~gi~i~kKiE----------------i~d~~eLte~~L~e~~Hp~  313 (342)
T KOG1747|consen  250 SIVFIYSMPGYGCSVKERMLYSSCKSGFLDSLKNDLGIVISKKIE----------------IDDGAELTEKFLYEELHPK  313 (342)
T ss_pred             eEEEEEECCCCCcchhhhhHhhhcchhHHHHHHHhcCeeEEEEEe----------------eCcHHHhhHHHHHHhhCcc
Confidence            3799999999999999999999999999999985 9999999999                9999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCCCCCCccccCCCch
Q psy158           80 KTAERPKFDKPKGPPNRGAKRITKPQATP  108 (116)
Q Consensus        80 ~~~~k~~FaKPkgP~rRg~~r~~k~~~~~  108 (116)
                      +.+.++.|++|+||++||++|++++++|+
T Consensus       314 ~i~h~qafa~P~~p~~rg~~R~~r~~~e~  342 (342)
T KOG1747|consen  314 QIAHPQAFAKPKGPGGRGKPRLPRRPAET  342 (342)
T ss_pred             cccccccccCCCCCCCCCCCCCCCCCCCC
Confidence            99999999999999999999999998874

>PLN03216 actin depolymerizing factor; Provisional

Probab=99.66  E-value=7.1e-17  Score=118.27  Aligned_cols=55  Identities=24%  Similarity=0.373  Sum_probs=50.9

Q ss_pred             CEEEEEecCCCCCCcccchhhhhccHHHHHHhhhcCceeeehhhhchhhHhhhhhcCcccCCCCCcCCHHHHHHHh
Q psy158            1 MFVFIYSMPGYSLPIKERMLYSSCKAPLLENLHHLGLTIDKKLKKKKKKKKKKKKKKKFPYNSGSELTEEFLLEEL   76 (116)
Q Consensus         1 k~vFIys~P~~s~pIKeRMlYSS~K~~l~~~l~~~Gl~i~kkle~~~~~~~~~~~~~~~~~nd~sELtee~l~eel   76 (116)
                      ++|||||||+ +++||+||||||||++|.+.|.  |+  ...+|                ++|.+||+++.|.+.+
T Consensus        86 klvFI~w~Pd-~a~vk~KMlYAssK~~lk~~l~--gi--~~~iq----------------atd~~el~~~~~~~~~  140 (141)
T PLN03216         86 KIFFIAWSPE-ASRIRAKMLYATSKDGLRRVLD--GV--HYELQ----------------ATDPTEMGFDVIRDRA  140 (141)
T ss_pred             CEEEEEECCC-CCCHHHHHHHHHHHHHHHHHhc--CC--eEEEE----------------ECChHhcCHHHHHHHh
Confidence            5899999999 9999999999999999999998  75  45799                9999999999998876

>PF00241 Cofilin_ADF: Cofilin/tropomyosin-type actin-binding protein; InterPro: IPR002108 The actin-depolymerising factor homology (ADF-H) domain is an ~150-amino acid motif that is present in three phylogenetically distinct classes of eukaryotic actin-binding proteins [, , ]: ADF/cofilins, which include ADF, cofilin, destrin, actophorin, coactosin, depactin and glia maturation factors (GMFs) beta and gamma

Probab=99.63  E-value=1.6e-16  Score=110.13  Aligned_cols=56  Identities=43%  Similarity=0.705  Sum_probs=49.9

Q ss_pred             CEEEEEecCCCCCCcccchhhhhccHHHHHHhhhcCceeeehhhhchhhHhhhhhcCcccCCCCCcCCHHHHHHHhC
Q psy158            1 MFVFIYSMPGYSLPIKERMLYSSCKAPLLENLHHLGLTIDKKLKKKKKKKKKKKKKKKFPYNSGSELTEEFLLEELH   77 (116)
Q Consensus         1 k~vFIys~P~~s~pIKeRMlYSS~K~~l~~~l~~~Gl~i~kkle~~~~~~~~~~~~~~~~~nd~sELtee~l~eel~   77 (116)
                      ++|||+|||+ ++|+|+||+||||+++|.+.|.  |  +...++                ++|.+|||++.|.++|.
T Consensus        72 k~vfI~w~P~-~~~vk~km~yas~k~~l~~~l~--~--~~~~~~----------------~~d~~dl~~~~i~~kl~  127 (127)
T PF00241_consen   72 KLVFIYWCPD-NAPVKEKMLYASSKASLKKKLG--G--IHIEIQ----------------ASDPDDLSEEEILEKLK  127 (127)
T ss_dssp             EEEEEEEEST-TS-HHHHHHHHHHHHHHHHHCT--T--EEEEEE----------------ESSGGGGSHHHHHHHH-
T ss_pred             eEEEEEEecC-CccHHHhhhhHHhHHHHHHHhC--C--ceEEEE----------------ECChHHCCHHHHHHhhC
Confidence            5899999999 8999999999999999999998  4  456789                99999999999999873

ADF/cofilins are small actin-binding proteins composed of a single ADF-H domain. They bind both actin-monomers and filaments and promote rapid filament turnover in cells by depolymerising/fragmenting actin filaments. ADF/cofilins bind ADP-actin with higher affinity than ATP-actin and inhibit the spontaneous nucleotide exchange on actin monomers Twinfilins, which are actin monomer-binding proteins that are composed of two ADF-H domains Abp1/Drebrins, which are relatively large proteins composed of an N-terminal ADF-H domain followed by a variable region and a C-terminal SH3 domain. Abp1/Drebrins interact only with actin filaments and do not promote filament depolymerisation or fragmentation Although these proteins are biochemically distinct and play different roles in actin dynamics, they all appear to use the ADF-H domain for their interactions with actin. The ADF-H domain consists of a six-stranded mixed beta-sheet in which the four central strands (beta2-beta5) are anti-parallel and the two edge strands (beta1 and beta6) run parallel with the neighbouring strands. The sheet is surrounded by two alpha-helices on each side [, , ].; GO: 0003779 actin binding, 0005622 intracellular; PDB: 1AK6_A 1AK7_A 1V6F_A 2L72_A 1CFY_A 1QPV_A 1COF_A 1TVJ_A 1X67_A 3L50_A ....

>cd00013 ADF Actin depolymerisation factor/cofilin -like domains; present in a family of essential eukaryotic actin regulatory proteins; these proteins enhance the turnover rate of actin and interact with actin monomers as well as actin filaments

Probab=99.62  E-value=2.5e-16  Score=109.51  Aligned_cols=55  Identities=44%  Similarity=0.677  Sum_probs=50.3

Q ss_pred             CEEEEEecCCCCCCcccchhhhhccHHHHHHhhhcCceeeehhhhchhhHhhhhhcCcccCCCCCcCCHHHHHHHh
Q psy158            1 MFVFIYSMPGYSLPIKERMLYSSCKAPLLENLHHLGLTIDKKLKKKKKKKKKKKKKKKFPYNSGSELTEEFLLEEL   76 (116)
Q Consensus         1 k~vFIys~P~~s~pIKeRMlYSS~K~~l~~~l~~~Gl~i~kkle~~~~~~~~~~~~~~~~~nd~sELtee~l~eel   76 (116)
                      ++|||||||+ ++|+++||+||||+++|.+.|.  |+  ...++                ++|.+|||++.|.++|
T Consensus        78 k~vfI~w~P~-~a~~k~km~yas~k~~l~~~l~--~~--~~~i~----------------a~~~~dl~~~~i~~kl  132 (132)
T cd00013          78 KIVFIYWSPE-TAPVKSKMLYASSKAALKRELV--GI--QVEVQ----------------ATDPDELDEEALLEKL  132 (132)
T ss_pred             CEEEEEECCC-CCChhhhhhhHHHHHHHHHhcC--Cc--eEEEE----------------ECChhhcCHHHHHhhC
Confidence            5899999999 9999999999999999999887  65  56799                9999999999998865

>smart00102 ADF Actin depolymerisation factor/cofilin -like domains

Probab=99.60  E-value=7.4e-16  Score=108.17  Aligned_cols=56  Identities=36%  Similarity=0.600  Sum_probs=51.1

Q ss_pred             CEEEEEecCCCCCCcccchhhhhccHHHHHHhhhcCceeeehhhhchhhHhhhhhcCcccCCCCCcCCHHHHHHHhC
Q psy158            1 MFVFIYSMPGYSLPIKERMLYSSCKAPLLENLHHLGLTIDKKLKKKKKKKKKKKKKKKFPYNSGSELTEEFLLEELH   77 (116)
Q Consensus         1 k~vFIys~P~~s~pIKeRMlYSS~K~~l~~~l~~~Gl~i~kkle~~~~~~~~~~~~~~~~~nd~sELtee~l~eel~   77 (116)
                      ++|||||||+ ++|+++||+|||++++|.+.|+  |+.  ..++                ++|.+||+++.|.++|+
T Consensus        72 k~vfI~w~P~-~a~~~~km~yas~k~~l~~~l~--~~~--~~i~----------------~~~~~el~~~~i~~kl~  127 (127)
T smart00102       72 KIVFIFWSPD-GAPVKSKMLYASSKDTLKKELG--GIQ--VEVQ----------------ATDEDDLDEEALKEKLK  127 (127)
T ss_pred             cEEEEEECCC-CCCHHHHHHHHHHHHHHHHHcC--Cce--EEEE----------------ECChhhcCHHHHHHHhC
Confidence            5899999999 8999999999999999999998  654  4689                99999999999999875

Severs actin filaments and binds to actin monomers.

>KOG1735|consensus

Probab=99.44  E-value=5.7e-14  Score=106.84  Aligned_cols=58  Identities=31%  Similarity=0.505  Sum_probs=53.4

Q ss_pred             CEEEEEecCCCCCCcccchhhhhccHHHHHHhhhcCceeeehhhhchhhHhhhhhcCcccCCCCCcCCHHHHHHHhCCC
Q psy158            1 MFVFIYSMPGYSLPIKERMLYSSCKAPLLENLHHLGLTIDKKLKKKKKKKKKKKKKKKFPYNSGSELTEEFLLEELHPK   79 (116)
Q Consensus         1 k~vFIys~P~~s~pIKeRMlYSS~K~~l~~~l~~~Gl~i~kkle~~~~~~~~~~~~~~~~~nd~sELtee~l~eel~P~   79 (116)
                      |++||.|||+ ++|||++|||||||++|...|.  |+  ...||                +||++|++.+.|.|.|.+.
T Consensus        86 Ki~f~~wsPd-~a~vKsKMiYaSSkDalkr~L~--Gi--~~elQ----------------atd~~E~~~~~~~ekl~~~  143 (146)
T KOG1735|consen   86 KIFFIAWSPD-TAPVKSKMIYASSKDALKRELT--GI--QHELQ----------------ATDPSEMSLDSLAEKLGGS  143 (146)
T ss_pred             eEEEEEECCC-ccchhhheeehhhHHHHhhhcc--Cc--eeeee----------------cCChHHhhHHHHHHHhccc
Confidence            6899999999 9999999999999999999996  75  56899                9999999999999998764

>PTZ00152 cofilin/actin-depolymerizing factor 1-like protein; Provisional

Probab=99.35  E-value=2.2e-13  Score=99.18  Aligned_cols=35  Identities=29%  Similarity=0.460  Sum_probs=32.4

Q ss_pred             CEEEEEecCCCCCCcccchhhhhccHHHHHHhhhcCce
Q psy158            1 MFVFIYSMPGYSLPIKERMLYSSCKAPLLENLHHLGLT   38 (116)
Q Consensus         1 k~vFIys~P~~s~pIKeRMlYSS~K~~l~~~l~~~Gl~   38 (116)
                      +++||||||+ ++|||+||||||||++|++.|.  |+.
T Consensus        72 klvFI~w~Pd-~a~ik~KMlYASsK~~l~~~l~--Gi~  106 (122)
T PTZ00152         72 KIHFFMYARE-SSNSRDRMTYASSKQALLKKIE--GVN  106 (122)
T ss_pred             CEEEEEECCC-CCChHHhhhhHhHHHHHHHHhc--chh
Confidence            5899999999 9999999999999999999998  554

>KOG1736|consensus

Probab=98.85  E-value=2.6e-09  Score=81.52  Aligned_cols=54  Identities=31%  Similarity=0.524  Sum_probs=50.1

Q ss_pred             EEEEEecCCCCCCcccchhhhhccHHHHHHhhhcCceeeehhhhchhhHhhhhhcCcccCCCCCcCCHHHHHHHhC
Q psy158            2 FVFIYSMPGYSLPIKERMLYSSCKAPLLENLHHLGLTIDKKLKKKKKKKKKKKKKKKFPYNSGSELTEEFLLEELH   77 (116)
Q Consensus         2 ~vFIys~P~~s~pIKeRMlYSS~K~~l~~~l~~~Gl~i~kkle~~~~~~~~~~~~~~~~~nd~sELtee~l~eel~   77 (116)
                      +|||||.|. .++.-..||||++|.-|++..+     +.+-+|                ++|-+|+|+|||.|.||
T Consensus        88 L~~Iyw~P~-~~~~e~~MmYAgak~~~~~~~~-----~~KvfE----------------ir~tdD~t~e~l~E~L~  141 (143)
T KOG1736|consen   88 LCFIYWSPV-GCKPEQQMMYAGAKNMLVQTAE-----LTKVFE----------------IRSTDDLTEEWLREKLE  141 (143)
T ss_pred             EEEEEecCc-cCCHHHHHHHHHHHHHHHHHhh-----heEEEE----------------ecccccccHHHHHHHhh
Confidence            699999999 9999999999999999998887     467789                99999999999999987

>KOG1747|consensus

Probab=98.65  E-value=1.9e-08  Score=85.29  Aligned_cols=59  Identities=25%  Similarity=0.397  Sum_probs=50.2

Q ss_pred             CEEEEEecCCCCCCcccchhhhhccHHHHHHhhhcCceeeehhhhchhhHhhhhhcCcccCCCCCcCCHHHHHHHhCC
Q psy158            1 MFVFIYSMPGYSLPIKERMLYSSCKAPLLENLHHLGLTIDKKLKKKKKKKKKKKKKKKFPYNSGSELTEEFLLEELHP   78 (116)
Q Consensus         1 k~vFIys~P~~s~pIKeRMlYSS~K~~l~~~l~~~Gl~i~kkle~~~~~~~~~~~~~~~~~nd~sELtee~l~eel~P   78 (116)
                      .++||.|.|| ++|||+||||||++|.|.....  |-.|+.++-                ++|.+|||..-....|.+
T Consensus        79 ~w~lIs~vPD-~apVR~KMLYAsTrATlkrefG--~~~i~ee~~----------------~T~~~dl~~~~~~k~l~~  137 (342)
T KOG1747|consen   79 EWLLISWVPD-NAPVRQKMLYASTRATLKREFG--GAYITEELF----------------ATDLEDLTLLGYFKSLSS  137 (342)
T ss_pred             cEEEEEECCC-CChHHHHHHHHHHHHHHHHHhc--cceeccccc----------------cCCHHHhhhHHHHHhhhh
Confidence            3789999999 9999999999999999999998  444777777                899999987776666554

>KOG3655|consensus

Probab=96.10  E-value=0.0067  Score=54.06  Aligned_cols=57  Identities=23%  Similarity=0.369  Sum_probs=48.3

Q ss_pred             CEEEEEecCCCCCCcccchhhhhccHHHHHHhhhcCceeeehhhhchhhHhhhhhcCcccCCCCCcCCHHHHHHHhCC
Q psy158            1 MFVFIYSMPGYSLPIKERMLYSSCKAPLLENLHHLGLTIDKKLKKKKKKKKKKKKKKKFPYNSGSELTEEFLLEELHP   78 (116)
Q Consensus         1 k~vFIys~P~~s~pIKeRMlYSS~K~~l~~~l~~~Gl~i~kkle~~~~~~~~~~~~~~~~~nd~sELtee~l~eel~P   78 (116)
                      |||||.||.. +.|+=.|-..|+=++-+.+.|.  |+.|  .|.                +++-+||++++|+++|.-
T Consensus        79 KfvLI~W~GE-~vp~~Rka~~ath~a~v~~~lk--g~hV--~i~----------------Ar~e~Dld~d~i~~~ls~  135 (484)
T KOG3655|consen   79 KFVLINWIGE-GVPVLRKAKCATHKALVKNFLK--GFHV--EIN----------------ARSEEDLDEDAIREKLSK  135 (484)
T ss_pred             ceEEEEecCC-ccHHHhhhhhcchHHHHHHHhh--cceE--EEe----------------ccchhhcCHHHHHHHHHh
Confidence            7999999999 8998888888888877777778  5433  577                999999999999999875

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	116
3daw_B	164	Structure Of The Actin-Depolymerizing Factor Homolo		9e-09
2d8b_A	166	Solution Structure Of The Second Tandem Cofilin-Dom		9e-09
2hd7_A	142	Solution Structure Of C-Teminal Domain Of Twinfilin		1e-08
2w0i_A	135	Structure Of C-Terminal Actin Depolymerizing Factor		2e-07

>pdb|3DAW|B Chain B, Structure Of The Actin-Depolymerizing Factor Homology Domain In Complex With Actin Length = 164

Iteration: 1
 Score = 55.1 bits (131), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 23/28 (82%), Positives = 26/28 (92%)
Query: 3   VFIYSMPGYSLPIKERMLYSSCKAPLLE 30
           VFIYSMPGY+  I+ERMLYSSCK+PLLE
Sbjct: 96  VFIYSMPGYTCSIRERMLYSSCKSPLLE 123

>pdb|2D8B|A Chain A, Solution Structure Of The Second Tandem Cofilin-Domain Of Mouse Twinfilin Length = 166

Iteration: 1
 Score = 55.1 bits (131), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 23/28 (82%), Positives = 26/28 (92%)
Query: 3   VFIYSMPGYSLPIKERMLYSSCKAPLLE 30
           VFIYSMPGY+  I+ERMLYSSCK+PLLE
Sbjct: 101 VFIYSMPGYTCSIRERMLYSSCKSPLLE 128

>pdb|2HD7|A Chain A, Solution Structure Of C-Teminal Domain Of Twinfilin-1 Length = 142

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 23/28 (82%), Positives = 26/28 (92%)
Query: 3   VFIYSMPGYSLPIKERMLYSSCKAPLLE 30
           VFIYSMPGY+  I+ERMLYSSCK+PLLE
Sbjct: 80  VFIYSMPGYTCSIRERMLYSSCKSPLLE 107

>pdb|2W0I|A Chain A, Structure Of C-Terminal Actin Depolymerizing Factor Homology (Adf-H) Domain Of Human Twinfilin-2 Length = 135

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 22/30 (73%), Positives = 26/30 (86%)
Query: 3   VFIYSMPGYSLPIKERMLYSSCKAPLLENL 32
           VFIYSMPGY   IKERMLYSSCK+ LL+++
Sbjct: 76  VFIYSMPGYKCSIKERMLYSSCKSRLLDSV 105

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	116
3daw_B	164	Twinfilin-1, protein A6; actin depolymerisation, a	9e-16
2d8b_A	166	Twinfilin-1; cell-free protein synthesis, actin-bi	2e-15
2w0i_A	135	Twinfilin-2; cytoskeleton, actin-binding, actin bi	6e-14
2kd5_A	144	ADF H, actin severing and dynamics regulatory prot	2e-08
1v6f_A	151	MGMF-beta, GLIA maturation factor, beta; actin bin	3e-08
1vkk_A	154	GMF-gamma, GLIA maturation factor gamma; 15079298,	7e-06
1cnu_A	137	Actophorin, ADF, cofilin; actin-binding protein, c	1e-05
2i2q_A	137	Cofilin; N-terminal serine, actin-binding protein;	2e-05

>3daw_B Twinfilin-1, protein A6; actin depolymerisation, actin binding proteins, cytoskeleton, structural protein/contractIle protein complex; HET: ATP; 2.55A {Mus musculus} PDB: 2hd7_A Length = 164

 Score = 68.1 bits (166), Expect = 9e-16
 Identities = 36/84 (42%), Positives = 52/84 (61%), Gaps = 17/84 (20%)

Query: 3   VFIYSMPGYSLPIKERMLYSSCKAPLLENL-HHLGLTIDKKLKKKKKKKKKKKKKKKFPY 61
           VFIYSMPGY+  I+ERMLYSSCK+PLLE +   L + + +K++                 
Sbjct: 96  VFIYSMPGYTCSIRERMLYSSCKSPLLEIVERQLQMDVIRKIE----------------I 139

Query: 62  NSGSELTEEFLLEELHPKKTAERP 85
           ++G ELT +FL +E+HPK+ A + 
Sbjct: 140 DNGDELTADFLYDEVHPKQHAHKQ 163

>2d8b_A Twinfilin-1; cell-free protein synthesis, actin-binding protein, developmental regulation, cellular remodeling, cytoskeleton, morphology; NMR {Mus musculus} Length = 166

 Score = 67.4 bits (164), Expect = 2e-15
 Identities = 33/81 (40%), Positives = 49/81 (60%), Gaps = 17/81 (20%)

Query: 3   VFIYSMPGYSLPIKERMLYSSCKAPLLENL-HHLGLTIDKKLKKKKKKKKKKKKKKKFPY 61
           VFIYSMPGY+  I+ERMLYSSCK+PLLE +   L + + +K++                 
Sbjct: 101 VFIYSMPGYTCSIRERMLYSSCKSPLLEIVERQLQMDVIRKIE----------------I 144

Query: 62  NSGSELTEEFLLEELHPKKTA 82
           ++G ELT +FL +E+H   ++
Sbjct: 145 DNGDELTADFLYDEVHSGPSS 165

>2w0i_A Twinfilin-2; cytoskeleton, actin-binding, actin binding, cofilin-like, phosphoprotein, phosphorylation, transferase, protein tyros kinase-9; 1.8A {Homo sapiens} Length = 135

 Score = 62.3 bits (151), Expect = 6e-14
 Identities = 35/76 (46%), Positives = 44/76 (57%), Gaps = 17/76 (22%)

Query: 3   VFIYSMPGYSLPIKERMLYSSCKAPLLENL-HHLGLTIDKKLKKKKKKKKKKKKKKKFPY 61
           VFIYSMPGY   IKERMLYSSCK+ LL+++     L I KK++                 
Sbjct: 76  VFIYSMPGYKCSIKERMLYSSCKSRLLDSVEQDFHLEIAKKIE----------------I 119

Query: 62  NSGSELTEEFLLEELH 77
             G+ELT EFL +E+H
Sbjct: 120 GDGAELTAEFLDDEVH 135

>1v6f_A MGMF-beta, GLIA maturation factor, beta; actin binding protein, cytoskeleton, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.109.1.2 Length = 151

 Score = 48.1 bits (114), Expect = 3e-08
 Identities = 17/81 (20%), Positives = 32/81 (39%), Gaps = 22/81 (27%)

Query: 2   FVFIYSMPGYSLPIKERMLYSSCKAPLLENLHHLGLTIDKKLKKKKKKKKKKKKKKKFPY 61
             FI+S P      +++M+Y+  K  L++                       +  K F  
Sbjct: 92  LCFIFSSP-VGCKPEQQMMYAGSKNKLVQTA---------------------ELTKVFEI 129

Query: 62  NSGSELTEEFLLEELHPKKTA 82
            +  +LTEE+L E+L    ++
Sbjct: 130 RNTEDLTEEWLREKLGSGPSS 150

>1vkk_A GMF-gamma, GLIA maturation factor gamma; 15079298, structural GEN JCSG, protein structure initiative, PSI, joint center for S genomics; 1.35A {Mus musculus} SCOP: d.109.1.2 PDB: 1wfs_A 3l50_A Length = 154

 Score = 41.6 bits (97), Expect = 7e-06
 Identities = 16/75 (21%), Positives = 29/75 (38%), Gaps = 22/75 (29%)

Query: 2   FVFIYSMPGYSLPIKERMLYSSCKAPLLENLHHLGLTIDKKLKKKKKKKKKKKKKKKFPY 61
             FI+S P      +++M+Y+  K  L++                       +  K F  
Sbjct: 98  LCFIFSSP-VGCKPEQQMMYAGSKNRLVQTA---------------------ELTKVFEI 135

Query: 62  NSGSELTEEFLLEEL 76
            +  +LTE +L E+L
Sbjct: 136 RTTDDLTETWLKEKL 150

>1cnu_A Actophorin, ADF, cofilin; actin-binding protein, contractIle; 2.25A {Acanthamoeba polyphaga} SCOP: d.109.1.2 PDB: 1ahq_A Length = 137

 Score = 40.7 bits (95), Expect = 1e-05
 Identities = 14/79 (17%), Positives = 28/79 (35%), Gaps = 21/79 (26%)

Query: 2   FVFIYSMPGYSLPIKERMLYSSCKAPLLENLHHLGLTIDKKLKKKKKKKKKKKKKKKFPY 61
             FI   P  + PIK +M+Y+S K  + + L  +                    + +   
Sbjct: 79  ITFILWAPDSA-PIKSKMMYTSTKDSIKKKLVGI--------------------QVEVQA 117

Query: 62  NSGSELTEEFLLEELHPKK 80
              +E++E+ + E      
Sbjct: 118 TDAAEISEDAVSERAKKDV 136

>2i2q_A Cofilin; N-terminal serine, actin-binding protein; HET: LDA; 1.72A {Schizosaccharomyces pombe} Length = 137

 Score = 39.9 bits (93), Expect = 2e-05
 Identities = 18/78 (23%), Positives = 27/78 (34%), Gaps = 21/78 (26%)

Query: 2   FVFIYSMPGYSLPIKERMLYSSCKAPLLENLHHLGLTIDKKLKKKKKKKKKKKKKKKFPY 61
            +FI   P  + PIK +M+YSS K  L      +                          
Sbjct: 81  IIFISWSPDVA-PIKSKMVYSSSKDTLRRAFTGI--------------------GTDIQA 119

Query: 62  NSGSELTEEFLLEELHPK 79
              SE+  E +LE++  K
Sbjct: 120 TDFSEVAYETVLEKVTRK 137

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	116
3daw_B	164	Twinfilin-1, protein A6; actin depolymerisation, a	99.84
2w0i_A	135	Twinfilin-2; cytoskeleton, actin-binding, actin bi	99.82
2d8b_A	166	Twinfilin-1; cell-free protein synthesis, actin-bi	99.82
2i2q_A	137	Cofilin; N-terminal serine, actin-binding protein;	99.69
1cnu_A	137	Actophorin, ADF, cofilin; actin-binding protein, c	99.68
1vkk_A	154	GMF-gamma, GLIA maturation factor gamma; 15079298,	99.68
1v6f_A	151	MGMF-beta, GLIA maturation factor, beta; actin bin	99.68
2lj8_A	144	Cofilin/actin depolymerizing factor, putative; pro	99.65
3q2b_A	124	Pfadf1, cofilin/actin-depolymerizing factor homolo	99.62
2kd5_A	144	ADF H, actin severing and dynamics regulatory prot	99.62
1hqz_1	141	ABP1P, actin-binding protein; cofilin homology dom	99.62
2kvk_A	144	Actin severing and dynamics regulatory protein; AD	99.62
1m4j_A	142	A6 gene product, twinfilin; mixed beta-sheet, PAIR	99.62
2l72_A	139	Tgadf, actin depolymerizing factor, putative; ADF/	99.61
1cfy_A	143	Cofilin; actin-binding, cytoskeleton, actin-bindin	99.61
2xfa_A	148	Actin depolymerization factor 2; actin binding pro	99.61
1f7s_A	139	Actin depolymerizing factor (ADF); KINK in alpha-h	99.59
1ak6_A	174	Destrin; actin depolymerization factor, actin-bind	99.59
1tvj_A	166	Cofilin; ADF, actin binding protein, actin depolym	99.58
2vac_A	134	Twinfilin-2; transferase, actin binding, phosphory	99.58
1x67_A	146	Drebrin-like protein; cell-free protein synthesis,	99.39
1t3y_A	141	Coactosin-like protein; beta sheet, protein bindin	99.24

>3daw_B Twinfilin-1, protein A6; actin depolymerisation, actin binding proteins, cytoskeleton, structural protein/contractIle protein complex; HET: ATP; 2.55A {Mus musculus} PDB: 2hd7_A

Probab=99.84  E-value=1e-21  Score=145.45  Aligned_cols=68  Identities=53%  Similarity=0.986  Sum_probs=59.6

Q ss_pred             EEEEEecCCCCCCcccchhhhhccHHHHHHhhh-cCceeeehhhhchhhHhhhhhcCcccCCCCCcCCHHHHHHHhCCCC
Q psy158            2 FVFIYSMPGYSLPIKERMLYSSCKAPLLENLHH-LGLTIDKKLKKKKKKKKKKKKKKKFPYNSGSELTEEFLLEELHPKK   80 (116)
Q Consensus         2 ~vFIys~P~~s~pIKeRMlYSS~K~~l~~~l~~-~Gl~i~kkle~~~~~~~~~~~~~~~~~nd~sELtee~l~eel~P~~   80 (116)
                      +|||||||+++++||+||||||||++|++.|.. .||+|.++||                ++|++|||+++|.++|||++
T Consensus        95 ~ifi~~~P~~~a~ik~kMlYASsK~~l~~~l~~~~Gi~i~k~ie----------------a~d~~Elt~e~l~ekl~p~~  158 (164)
T 3daw_B           95 VVFIYSMPGYTCSIRERMLYSSCKSPLLEIVERQLQMDVIRKIE----------------IDNGDELTADFLYDEVHPKQ  158 (164)
T ss_dssp             EEEEEECCSTTSCHHHHHHHHHTHHHHHHHHHHHHCCCEEEEEE----------------ESSSSSCCHHHHHHHHSCC-
T ss_pred             EEEEEEcCCCCCCHHHHHHHHHhHHHHHHHHhhccCCceeEEEE----------------eCChHHcCHHHHHhHhCCcc
Confidence            799999999899999999999999999999975 6999999999                99999999999999999999


Q ss_pred             CCCCC
Q psy158           81 TAERP   85 (116)
Q Consensus        81 ~~~k~   85 (116)
                      .+.++
T Consensus       159 ~~~~~  163 (164)
T 3daw_B          159 HAHKQ  163 (164)
T ss_dssp             -----
T ss_pred             cccCC
Confidence            87665

>2w0i_A Twinfilin-2; cytoskeleton, actin-binding, actin binding, cofilin-like, phosphoprotein, phosphorylation, transferase, protein tyros kinase-9; 1.8A {Homo sapiens}

Probab=99.82  E-value=3.9e-21  Score=136.00  Aligned_cols=61  Identities=57%  Similarity=0.954  Sum_probs=58.2

Q ss_pred             CEEEEEecCCCCCCcccchhhhhccHHHHHHhh-hcCceeeehhhhchhhHhhhhhcCcccCCCCCcCCHHHHHHHhC
Q psy158            1 MFVFIYSMPGYSLPIKERMLYSSCKAPLLENLH-HLGLTIDKKLKKKKKKKKKKKKKKKFPYNSGSELTEEFLLEELH   77 (116)
Q Consensus         1 k~vFIys~P~~s~pIKeRMlYSS~K~~l~~~l~-~~Gl~i~kkle~~~~~~~~~~~~~~~~~nd~sELtee~l~eel~   77 (116)
                      ++|||||||+|+++||+||||||||++|++.|. ++|+.|.+++|                ++|++||++++|.++||
T Consensus        74 k~vfI~w~P~~~~~vk~kMlYassk~~l~~~l~~~~Gi~v~~~ie----------------a~d~~el~~~~i~~kl~  135 (135)
T 2w0i_A           74 SVVFIYSMPGYKCSIKERMLYSSCKSRLLDSVEQDFHLEIAKKIE----------------IGDGAELTAEFLDDEVH  135 (135)
T ss_dssp             EEEEEEECCGGGSCHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEE----------------ESCGGGCCHHHHHHHHC
T ss_pred             cEEEEEECCCCCCCHHHHhHhHHhHHHHHHHHhhccCCceeEEEE----------------cCChhhcCHHHHHHhhC
Confidence            589999999989999999999999999999998 58999889999                99999999999999987

>2d8b_A Twinfilin-1; cell-free protein synthesis, actin-binding protein, developmental regulation, cellular remodeling, cytoskeleton, morphology; NMR {Mus musculus}

Probab=99.82  E-value=5.4e-21  Score=140.70  Aligned_cols=66  Identities=50%  Similarity=0.932  Sum_probs=61.9

Q ss_pred             CEEEEEecCCCCCCcccchhhhhccHHHHHHhh-hcCceeeehhhhchhhHhhhhhcCcccCCCCCcCCHHHHHHHhCCC
Q psy158            1 MFVFIYSMPGYSLPIKERMLYSSCKAPLLENLH-HLGLTIDKKLKKKKKKKKKKKKKKKFPYNSGSELTEEFLLEELHPK   79 (116)
Q Consensus         1 k~vFIys~P~~s~pIKeRMlYSS~K~~l~~~l~-~~Gl~i~kkle~~~~~~~~~~~~~~~~~nd~sELtee~l~eel~P~   79 (116)
                      ++|||||||+|+++||+||||||||++|++.|. .+|++|.++||                ++|++||++++|.++|+|+
T Consensus        99 k~vFI~w~P~~~~~ik~KMlYAssk~~l~~~l~~~~Gi~v~~~ie----------------a~d~~El~~~~i~~kl~p~  162 (166)
T 2d8b_A           99 SVVFIYSMPGYTCSIRERMLYSSCKSPLLEIVERQLQMDVIRKIE----------------IDNGDELTADFLYDEVHSG  162 (166)
T ss_dssp             EEEEEEECCCSSSCHHHHHHHHHTTHHHHHHHTTSSCCCCSEEEE----------------ESSSTTCCHHHHHHHHHTC
T ss_pred             cEEEEEECCCCCCCHHHeeehhhhHHHHHHHHhhccCCceeEEEE----------------eCChHHCCHHHHHHHhCCC
Confidence            589999999999999999999999999999998 58998899999                9999999999999999998


Q ss_pred             CCC
Q psy158           80 KTA   82 (116)
Q Consensus        80 ~~~   82 (116)
                      +..
T Consensus       163 ~~~  165 (166)
T 2d8b_A          163 PSS  165 (166)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            753

>2i2q_A Cofilin; N-terminal serine, actin-binding protein; HET: LDA; 1.72A {Schizosaccharomyces pombe}

Probab=99.69  E-value=3.7e-18  Score=119.84  Aligned_cols=58  Identities=33%  Similarity=0.487  Sum_probs=40.4

Q ss_pred             CEEEEEecCCCCCCcccchhhhhccHHHHHHhhhcCceeeehhhhchhhHhhhhhcCcccCCCCCcCCHHHHHHHhCCC
Q psy158            1 MFVFIYSMPGYSLPIKERMLYSSCKAPLLENLHHLGLTIDKKLKKKKKKKKKKKKKKKFPYNSGSELTEEFLLEELHPK   79 (116)
Q Consensus         1 k~vFIys~P~~s~pIKeRMlYSS~K~~l~~~l~~~Gl~i~kkle~~~~~~~~~~~~~~~~~nd~sELtee~l~eel~P~   79 (116)
                      ++|||||||+ ++||++||||||||+.|.+.|.  |+  ..+++                ++|++|||+++|.++|+++
T Consensus        80 k~vfI~w~Pd-~a~vk~KMlyassk~~l~~~l~--g~--~~~i~----------------a~d~~el~~~~i~~kl~~k  137 (137)
T 2i2q_A           80 KIIFISWSPD-VAPIKSKMVYSSSKDTLRRAFT--GI--GTDIQ----------------ATDFSEVAYETVLEKVTRK  137 (137)
T ss_dssp             EEEEEEECCT-TSCHHHHHHHHHHHHHHHTTCC--CC--CEEEE----------------ECCCC--------------
T ss_pred             CEEEEEECCC-CCChhHhhhhHHHHHHHHHHhc--Cc--eEEEE----------------ECChHHcCHHHHHHHhcCC
Confidence            5899999999 9999999999999999999997  65  44799                9999999999999999863

>1cnu_A Actophorin, ADF, cofilin; actin-binding protein, contractIle; 2.25A {Acanthamoeba polyphaga} SCOP: d.109.1.2 PDB: 1ahq_A

Probab=99.68  E-value=1.6e-17  Score=116.33  Aligned_cols=57  Identities=28%  Similarity=0.510  Sum_probs=52.6

Q ss_pred             CEEEEEecCCCCCCcccchhhhhccHHHHHHhhhcCceeeehhhhchhhHhhhhhcCcccCCCCCcCCHHHHHHHhCC
Q psy158            1 MFVFIYSMPGYSLPIKERMLYSSCKAPLLENLHHLGLTIDKKLKKKKKKKKKKKKKKKFPYNSGSELTEEFLLEELHP   78 (116)
Q Consensus         1 k~vFIys~P~~s~pIKeRMlYSS~K~~l~~~l~~~Gl~i~kkle~~~~~~~~~~~~~~~~~nd~sELtee~l~eel~P   78 (116)
                      ++|||||||+ ++||++||||||||++|.+.|+  |+  ..+++                ++|.+|||+++|.++|+.
T Consensus        78 k~vfI~w~Pd-~a~v~~Kmlyassk~~l~~~l~--g~--~~~i~----------------a~~~~el~~~~i~~kl~~  134 (137)
T 1cnu_A           78 KITFILWAPD-SAPIKSKMMYTSTKDSIKKKLV--GI--QVEVQ----------------ATDAAEISEDAVSERAKK  134 (137)
T ss_dssp             EEEEEEECCT-TSCHHHHHHHHHHHHHHHHHST--TC--CEEEE----------------ECSTTTTSHHHHHHHHTC
T ss_pred             CEEEEEECCC-CCChHHheehHHhHHHHHHHhc--Cc--eEEEE----------------ECChHHCCHHHHHHHHhc
Confidence            5899999999 9999999999999999999997  65  44799                999999999999999985

>1vkk_A GMF-gamma, GLIA maturation factor gamma; 15079298, structural GEN JCSG, protein structure initiative, PSI, joint center for S genomics; 1.35A {Mus musculus} SCOP: d.109.1.2 PDB: 1wfs_A 3l50_A

Probab=99.68  E-value=1.5e-17  Score=121.40  Aligned_cols=55  Identities=27%  Similarity=0.483  Sum_probs=51.0

Q ss_pred             CEEEEEecCCCCCCcccchhhhhccHHHHHHhhhcCceeeehhhhchhhHhhhhhcCcccCCCCCcCCHHHHHHHhC
Q psy158            1 MFVFIYSMPGYSLPIKERMLYSSCKAPLLENLHHLGLTIDKKLKKKKKKKKKKKKKKKFPYNSGSELTEEFLLEELH   77 (116)
Q Consensus         1 k~vFIys~P~~s~pIKeRMlYSS~K~~l~~~l~~~Gl~i~kkle~~~~~~~~~~~~~~~~~nd~sELtee~l~eel~   77 (116)
                      ++|||||||+ +++|++||||||||++|.+.|   |  |.+.||                ++|++||++++|.++|.
T Consensus        97 klvFI~w~P~-~a~vk~KMlYAssk~~l~~~l---g--i~~~ie----------------a~d~~El~~e~i~~kl~  151 (154)
T 1vkk_A           97 PLCFIFSSPV-GCKPEQQMMYAGSKNRLVQTA---E--LTKVFE----------------IRTTDDLTETWLKEKLA  151 (154)
T ss_dssp             CEEEEEECCT-TSCHHHHHHHHHHHHHHHHHT---T--CCCEEE----------------ESSGGGCCHHHHHHHHH
T ss_pred             cEEEEEECCC-CCChhhhhhhHhhHHHHHHhh---C--ceEEEE----------------ECChHhCCHHHHHHHHh
Confidence            6899999999 999999999999999999998   5  467899                99999999999999874

>1v6f_A MGMF-beta, GLIA maturation factor, beta; actin binding protein, cytoskeleton, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.109.1.2

Probab=99.68  E-value=1.5e-17  Score=119.98  Aligned_cols=56  Identities=29%  Similarity=0.491  Sum_probs=52.0

Q ss_pred             CEEEEEecCCCCCCcccchhhhhccHHHHHHhhhcCceeeehhhhchhhHhhhhhcCcccCCCCCcCCHHHHHHHhCC
Q psy158            1 MFVFIYSMPGYSLPIKERMLYSSCKAPLLENLHHLGLTIDKKLKKKKKKKKKKKKKKKFPYNSGSELTEEFLLEELHP   78 (116)
Q Consensus         1 k~vFIys~P~~s~pIKeRMlYSS~K~~l~~~l~~~Gl~i~kkle~~~~~~~~~~~~~~~~~nd~sELtee~l~eel~P   78 (116)
                      ++|||||||+ +++|++||||||||+.|++.|   |  |.+.||                ++|++||++++|.++|+.
T Consensus        91 k~vfI~w~P~-~a~vk~KMlYAssk~~l~~~l---g--i~~~ie----------------a~d~~El~~~~i~~kl~~  146 (151)
T 1v6f_A           91 PLCFIFSSPV-GCKPEQQMMYAGSKNKLVQTA---E--LTKVFE----------------IRNTEDLTEEWLREKLGS  146 (151)
T ss_dssp             CEEEEEECCT-TSCHHHHHHHHHHHHHHHHHT---T--CSEEEE----------------ESSGGGCCHHHHHHHHHS
T ss_pred             cEEEEEECCC-CCChHHheehHHHHHHHHHHh---C--CeEEEE----------------ECChHHCCHHHHHHHHcc
Confidence            6899999999 999999999999999999998   5  467899                999999999999999984

>2lj8_A Cofilin/actin depolymerizing factor, putative; protein binding; NMR {Trypanosoma brucei}

Probab=99.65  E-value=3.9e-17  Score=117.30  Aligned_cols=55  Identities=25%  Similarity=0.353  Sum_probs=50.6

Q ss_pred             CEEEEEecCCCCCCcccchhhhhccHHHHHHhhhcCceeeehhhhchhhHhhhhhcCcccCCCCCcCCHHHHHHHhC
Q psy158            1 MFVFIYSMPGYSLPIKERMLYSSCKAPLLENLHHLGLTIDKKLKKKKKKKKKKKKKKKFPYNSGSELTEEFLLEELH   77 (116)
Q Consensus         1 k~vFIys~P~~s~pIKeRMlYSS~K~~l~~~l~~~Gl~i~kkle~~~~~~~~~~~~~~~~~nd~sELtee~l~eel~   77 (116)
                      ++|||||||+ ++|||+||||||||++|.+.|.  |+   +.||                ++|.+|||+++|+++|.
T Consensus        87 k~vfI~w~Pd-~a~vk~KMlYASsk~~l~~~l~--~~---~~i~----------------a~d~~el~~e~i~~kl~  141 (144)
T 2lj8_A           87 KLILISWNPD-SGAPRTKMLYSSSRDALVPLTQ--GF---QGIQ----------------ANDASGLDFEEISRKVK  141 (144)
T ss_dssp             EEEEEEECCT-TSCHHHHHHHHHHHHHHHHHTT--TS---EEEE----------------CCGGGTSCHHHHHHHHH
T ss_pred             cEEEEEEcCC-CCCHHHHHHHHHHHHHHHHHhC--Ce---eEEE----------------eCChHHCCHHHHHHHHh
Confidence            5899999999 9999999999999999999998  54   4699                99999999999999875

>3q2b_A Pfadf1, cofilin/actin-depolymerizing factor homolog 1; actin regulator, actin-binding protein; HET: TAR; 1.60A {Plasmodium falciparum} PDB: 2xf1_A

Probab=99.62  E-value=3.6e-17  Score=115.72  Aligned_cols=49  Identities=20%  Similarity=0.377  Sum_probs=45.0

Q ss_pred             CEEEEEecCCCCCCcccchhhhhccHHHHHHhhhcCceeeehhhhchhhHhhhhhcCcccCCCCCcCCH
Q psy158            1 MFVFIYSMPGYSLPIKERMLYSSCKAPLLENLHHLGLTIDKKLKKKKKKKKKKKKKKKFPYNSGSELTE   69 (116)
Q Consensus         1 k~vFIys~P~~s~pIKeRMlYSS~K~~l~~~l~~~Gl~i~kkle~~~~~~~~~~~~~~~~~nd~sELte   69 (116)
                      ++|||||||+ ++|||+||||||||++|++.|.  |+.+ ++++                ++|++|||+
T Consensus        74 k~vfI~w~Pd-~a~vk~KMlYASsk~~l~~~l~--g~~~-~~i~----------------a~d~~dlt~  122 (124)
T 3q2b_A           74 KIHFFMYARE-SSNSRDRMTYASSKQAILKKIE--GVNV-LTSV----------------IESAQDVAD  122 (124)
T ss_dssp             CEEEEEEECT-TSCHHHHHHHHHHHHHHHTTST--TSEE-CCSC----------------BCSHHHHTT
T ss_pred             CEEEEEECCC-CCChhHhhhhHHHHHHHHHHhC--CCce-EEEE----------------ecCHHHccc
Confidence            5899999999 9999999999999999999998  7765 6899                999999975

>1hqz_1 ABP1P, actin-binding protein; cofilin homology domain, NEW YORK SGX researc for structural genomics, NYSGXRC, structural genomics, PSI; 2.10A {Saccharomyces cerevisiae} SCOP: d.109.1.2

Probab=99.62  E-value=1.1e-16  Score=113.08  Aligned_cols=58  Identities=21%  Similarity=0.326  Sum_probs=52.1

Q ss_pred             CEEEEEecCCCCCCcccchhhhhccHHHHH-HhhhcCceeeehhhhchhhHhhhhhcCcccCCCCCcCCHHHHHHHhCCC
Q psy158            1 MFVFIYSMPGYSLPIKERMLYSSCKAPLLE-NLHHLGLTIDKKLKKKKKKKKKKKKKKKFPYNSGSELTEEFLLEELHPK   79 (116)
Q Consensus         1 k~vFIys~P~~s~pIKeRMlYSS~K~~l~~-~l~~~Gl~i~kkle~~~~~~~~~~~~~~~~~nd~sELtee~l~eel~P~   79 (116)
                      ++|||||||+ ++|||+||+|||||+.|.+ .|+  |+.+  .|+                ++|.+|||++.|.++++..
T Consensus        80 k~vfI~w~Pd-~~~vk~Kmlyas~k~~l~~~~l~--g~~~--~i~----------------a~~~~el~~e~i~~kl~~a  138 (141)
T 1hqz_1           80 KIIIIGWCPD-SAPLKTRASFAANFAAVANNLFK--GYHV--QVT----------------ARDEDDLDENELLMKISNA  138 (141)
T ss_dssp             EEEEEEECCT-TSCHHHHHHHHHHHHHHHHHTSC--SCSE--EEE----------------ESSGGGGCHHHHHHHHHTC
T ss_pred             eEEEEEECCC-CCChhheEEEeccHHHHHHHhCC--ceEE--EEE----------------ECChHHCCHHHHHHHHHhc
Confidence            5899999999 8999999999999999997 887  6544  689                9999999999999999753

>2kvk_A Actin severing and dynamics regulatory protein; ADF/cofilin, hormone; NMR {Leishmania donovani}

Probab=99.62  E-value=1.2e-16  Score=114.57  Aligned_cols=56  Identities=21%  Similarity=0.369  Sum_probs=50.9

Q ss_pred             CEEEEEecCCCCCCcccchhhhhccHHHHHHhhhcCceeeehhhhchhhHhhhhhcCcccCCCCCcCCHHHHHHHhCC
Q psy158            1 MFVFIYSMPGYSLPIKERMLYSSCKAPLLENLHHLGLTIDKKLKKKKKKKKKKKKKKKFPYNSGSELTEEFLLEELHP   78 (116)
Q Consensus         1 k~vFIys~P~~s~pIKeRMlYSS~K~~l~~~l~~~Gl~i~kkle~~~~~~~~~~~~~~~~~nd~sELtee~l~eel~P   78 (116)
                      ++|||||||+ ++|||+||||||||++|.+.|+  |.   ..+|                ++|.+||++++|+++|..
T Consensus        80 k~vfI~w~Pd-~a~vk~KMlyassk~~lk~~l~--~~---~~i~----------------a~d~~el~~e~i~~kl~~  135 (144)
T 2kvk_A           80 KLILIQWIPD-TARPREKMMYSASRDALSSVSE--GY---LPIQ----------------ANDESGLDAEEIIRKVRL  135 (144)
T ss_dssp             EEEEEEECCT-TSCHHHHHHHHHHHHHHHHHCT--TE---EEEE----------------ESSGGGGCHHHHHHHHHH
T ss_pred             cEEEEEECCC-CCCHHHHHHHHHHHHHHHHhcC--CE---EEEE----------------ECChHHCCHHHHHHHHhc
Confidence            5899999999 9999999999999999999997  52   4799                999999999999998853

>1m4j_A A6 gene product, twinfilin; mixed beta-sheet, PAIR of alpha-helices, structural protein; 1.60A {Mus musculus} SCOP: d.109.1.2

Probab=99.62  E-value=7.8e-17  Score=114.47  Aligned_cols=59  Identities=19%  Similarity=0.281  Sum_probs=53.6

Q ss_pred             CEEEEEecCCCCCCcccchhhhhccHHHHHHhhhcCceeeehhhhchhhHhhhhhcCcccCCCCCcCCHHHHHHHhCC
Q psy158            1 MFVFIYSMPGYSLPIKERMLYSSCKAPLLENLHHLGLTIDKKLKKKKKKKKKKKKKKKFPYNSGSELTEEFLLEELHP   78 (116)
Q Consensus         1 k~vFIys~P~~s~pIKeRMlYSS~K~~l~~~l~~~Gl~i~kkle~~~~~~~~~~~~~~~~~nd~sELtee~l~eel~P   78 (116)
                      ++|||+|||+ ++||++||||||||+.|.+.|.  |+.+...++                ++|.+||+++.+.+++..
T Consensus        82 k~vfI~w~Pd-~a~vr~KMlYAssk~~lk~~l~--g~~~~~~i~----------------atd~~el~~~~i~~~l~~  140 (142)
T 1m4j_A           82 EWIFIAWSPD-HSHVRQKMLYAATRATLKKEFG--GGHIKDEVF----------------GTVKEDVSLHGYKKYLLS  140 (142)
T ss_dssp             EEEEEEECCT-TSCHHHHHHHHHHHHHHHHHHC--GGGEEEEEE----------------ESSHHHHSHHHHHHHHC-
T ss_pred             eEEEEEEcCC-CCCHHHHHHHHHHHHHHHHHcC--CceeEEEEE----------------eCChHHCCHHHHHHHHhc
Confidence            5899999999 9999999999999999999998  766666799                999999999999998753

>2l72_A Tgadf, actin depolymerizing factor, putative; ADF/cofilin, actin binding, protein binding; NMR {Toxoplasma gondii}

Probab=99.61  E-value=1e-16  Score=115.91  Aligned_cols=50  Identities=32%  Similarity=0.470  Sum_probs=45.5

Q ss_pred             CEEEEEecCCCCCCcccchhhhhccHHHHHHhhhcCceeeehhhhchhhHhhhhhcCcccCCCCCcCCHH
Q psy158            1 MFVFIYSMPGYSLPIKERMLYSSCKAPLLENLHHLGLTIDKKLKKKKKKKKKKKKKKKFPYNSGSELTEE   70 (116)
Q Consensus         1 k~vFIys~P~~s~pIKeRMlYSS~K~~l~~~l~~~Gl~i~kkle~~~~~~~~~~~~~~~~~nd~sELtee   70 (116)
                      ++|||||||+ ++|||+||||||||++|++.|.  |+.+.+ ++                ++|++|||++
T Consensus        89 k~vFI~w~Pd-~a~vk~KMlYASsk~~lk~~l~--g~~v~~-ie----------------a~~~~DLte~  138 (139)
T 2l72_A           89 KIQFVLWCPD-NAPVKPRMTYASSKDALLKKLD--GATAVA-LE----------------AHEMGDLAPL  138 (139)
T ss_dssp             CEEEEEECCT-TSCHHHHHHHHHHHHHHHHHHC--SCCSCE-EE----------------ESSTTTTSCC
T ss_pred             cEEEEEECCC-CCChhHeeehHhhHHHHHHHhC--CceEEE-EE----------------eCCHHHCccC
Confidence            6899999999 9999999999999999999998  776653 89                9999999974

>1cfy_A Cofilin; actin-binding, cytoskeleton, actin-binding protein; 2.30A {Saccharomyces cerevisiae} SCOP: d.109.1.2 PDB: 1cof_A 1qpv_A

Probab=99.61  E-value=2.1e-16  Score=111.55  Aligned_cols=57  Identities=26%  Similarity=0.457  Sum_probs=52.2

Q ss_pred             CEEEEEecCCCCCCcccchhhhhccHHHHHHhhhcCceeeehhhhchhhHhhhhhcCcccCCCCCcCCHHHHHHHhCC
Q psy158            1 MFVFIYSMPGYSLPIKERMLYSSCKAPLLENLHHLGLTIDKKLKKKKKKKKKKKKKKKFPYNSGSELTEEFLLEELHP   78 (116)
Q Consensus         1 k~vFIys~P~~s~pIKeRMlYSS~K~~l~~~l~~~Gl~i~kkle~~~~~~~~~~~~~~~~~nd~sELtee~l~eel~P   78 (116)
                      ++|||||||+ ++||++||+|||+|+.|.+.|+  |+.+  .|+                ++|.+||+++.|.+++..
T Consensus        82 k~vfI~w~Pd-~a~v~~KmlyAssk~~l~~~l~--g~~~--~i~----------------a~d~~el~~~~i~~kl~~  138 (143)
T 1cfy_A           82 KIVFFTWSPD-TAPVRSKMVYASSKDALRRALN--GVST--DVQ----------------GTDFSEVSYDSVLERVSR  138 (143)
T ss_dssp             EEEEEEECCT-TSCHHHHHHHHHHHHHHHHHCT--TCCE--EEE----------------ESSGGGGSHHHHHHHHHC
T ss_pred             CEEEEEECCC-CCChhheeehHhhHHHHHHhcC--CceE--EEE----------------eCChHHCCHHHHHHHHhh
Confidence            5899999999 9999999999999999999997  6544  689                999999999999999875

>2xfa_A Actin depolymerization factor 2; actin binding protein, protein binding; 2.10A {Plasmodium berghei}

Probab=99.61  E-value=1.6e-16  Score=113.31  Aligned_cols=56  Identities=27%  Similarity=0.361  Sum_probs=50.7

Q ss_pred             CEEEEEecCCCCCCcccchhhhhccHHHHHHhhhcCceeeehhhhchhhHhhhhhcCcccCCCCCcCCHHHHHHHhCC
Q psy158            1 MFVFIYSMPGYSLPIKERMLYSSCKAPLLENLHHLGLTIDKKLKKKKKKKKKKKKKKKFPYNSGSELTEEFLLEELHP   78 (116)
Q Consensus         1 k~vFIys~P~~s~pIKeRMlYSS~K~~l~~~l~~~Gl~i~kkle~~~~~~~~~~~~~~~~~nd~sELtee~l~eel~P   78 (116)
                      ++|||||||+ ++||++||||||||+.|.+.|.  |+.+  .++                ++| +||+++.|+++++.
T Consensus        91 k~vfI~w~Pd-~a~vr~KMlYAssk~~lk~~l~--g~~~--~i~----------------atd-~el~~~~i~~k~~~  146 (148)
T 2xfa_A           91 RIYFIFWSPG-LSKPKEKMLYAASKESLVRKIN--GIFK--SLE----------------ITC-DINEFEEELKAIIL  146 (148)
T ss_dssp             EEEEEEECCT-TSCHHHHHHHHHHHHHHHTTCT--TCSE--EEE----------------ECS-CGGGHHHHHHHHHH
T ss_pred             CEEEEEECCC-CCChHHHhHhHHHHHHHHHHhc--CCeE--EEE----------------EEc-ccCCHHHHHHHhhc
Confidence            5899999999 9999999999999999999997  7644  799                999 99999999998753

>1f7s_A Actin depolymerizing factor (ADF); KINK in alpha-helix 3, plant protein; HET: LDA; 2.00A {Arabidopsis thaliana} SCOP: d.109.1.2

Probab=99.59  E-value=1.7e-16  Score=112.04  Aligned_cols=55  Identities=20%  Similarity=0.404  Sum_probs=41.4

Q ss_pred             CEEEEEecCCCCCCcccchhhhhccHHHHHHhhhcCceeeehhhhchhhHhhhhhcCcccCCCCCcCCHHHHHHHh
Q psy158            1 MFVFIYSMPGYSLPIKERMLYSSCKAPLLENLHHLGLTIDKKLKKKKKKKKKKKKKKKFPYNSGSELTEEFLLEEL   76 (116)
Q Consensus         1 k~vFIys~P~~s~pIKeRMlYSS~K~~l~~~l~~~Gl~i~kkle~~~~~~~~~~~~~~~~~nd~sELtee~l~eel   76 (116)
                      ++|||||||+ ++||++||||||+|+.|.+.|+  |+.+  .|+                ++|.+||+++.|.+++
T Consensus        84 k~vfI~w~P~-~a~v~~KmlyAssk~~l~~~l~--g~~v--~i~----------------a~d~~el~~~~i~~~~  138 (139)
T 1f7s_A           84 KIFFIAWCPD-IAKVRSKMIYASSKDRFKRELD--GIQV--ELQ----------------ATDPTEMDLDVFRSRA  138 (139)
T ss_dssp             EEEEEEECCT-TSCHHHHHHHHHHHHHHHTTCT--TCCE--EEE----------------ECCTTC----------
T ss_pred             CEEEEEECCC-CCChhHheehHHhHHHHHHhcC--CeEE--EEE----------------ECChHHCCHHHHHHhh
Confidence            5899999999 9999999999999999999998  6544  689                9999999999998876

>1ak6_A Destrin; actin depolymerization factor, actin-binding protein; NMR {Homo sapiens} SCOP: d.109.1.2 PDB: 1ak7_A 1q8g_A 1q8x_A 3j0s_M

Probab=99.59  E-value=4.1e-16  Score=115.43  Aligned_cols=60  Identities=22%  Similarity=0.428  Sum_probs=54.3

Q ss_pred             CEEEEEecCCCCCCcccchhhhhccHHHHHHhhhcCceeeehhhhchhhHhhhhhcCcccCCCCCcCCHHHHHHHhCCCC
Q psy158            1 MFVFIYSMPGYSLPIKERMLYSSCKAPLLENLHHLGLTIDKKLKKKKKKKKKKKKKKKFPYNSGSELTEEFLLEELHPKK   80 (116)
Q Consensus         1 k~vFIys~P~~s~pIKeRMlYSS~K~~l~~~l~~~Gl~i~kkle~~~~~~~~~~~~~~~~~nd~sELtee~l~eel~P~~   80 (116)
                      ++|||||||+ ++|||+||||||||+.|.+.|.  |+  ...++                ++|.+||++++|.++|....
T Consensus       107 klvfI~W~Pd-~a~vk~KMlYAssk~~lk~~l~--gi--~~~i~----------------atd~~El~~e~i~~kl~~~~  165 (174)
T 1ak6_A          107 ELMFFLWAPE-LAPLKSKMIYASSKDAIKKKFQ--GI--KHECQ----------------ANGPEDLNRACIAEKLGGSL  165 (174)
T ss_dssp             CCCEEEECCS-SSCHHHHHSHHHHHHHHHHHCT--TC--SCCEE----------------ESSTTTTCHHHHHHHTTTTS
T ss_pred             cEEEEEECCC-CCCHHHhhHHHHHHHHHHHHhc--CC--eEEEE----------------ECChhhcCHHHHHHHhccCc
Confidence            5899999999 9999999999999999999998  64  56799                99999999999999999754


Q ss_pred             C
Q psy158           81 T   81 (116)
Q Consensus        81 ~   81 (116)
                      .
T Consensus       166 ~  166 (174)
T 1ak6_A          166 I  166 (174)
T ss_dssp             C
T ss_pred             e
Confidence            3

>1tvj_A Cofilin; ADF, actin binding protein, actin depolymerizing factor, actin-binding protein; NMR {Gallus gallus}

Probab=99.58  E-value=6.1e-16  Score=113.51  Aligned_cols=59  Identities=27%  Similarity=0.480  Sum_probs=53.5

Q ss_pred             CEEEEEecCCCCCCcccchhhhhccHHHHHHhhhcCceeeehhhhchhhHhhhhhcCcccCCCCCcC-CHHHHHHHhCCC
Q psy158            1 MFVFIYSMPGYSLPIKERMLYSSCKAPLLENLHHLGLTIDKKLKKKKKKKKKKKKKKKFPYNSGSEL-TEEFLLEELHPK   79 (116)
Q Consensus         1 k~vFIys~P~~s~pIKeRMlYSS~K~~l~~~l~~~Gl~i~kkle~~~~~~~~~~~~~~~~~nd~sEL-tee~l~eel~P~   79 (116)
                      ++|||+|||+ ++||++||||||||+.|.+.|.  |+  ...++                ++|.+|| ++++|.++|...
T Consensus        98 klvfI~W~Pd-~a~vr~KMlYAssk~~lk~~l~--gi--~~~i~----------------atd~~el~~~~~i~ekl~~~  156 (166)
T 1tvj_A           98 DLVFIFWAPE-SAPLKSKMIYASSKDAIKKKFT--GI--KHEWQ----------------VNGLDDIKDRSTLGEKLGGN  156 (166)
T ss_dssp             EEEEEEECCT-TSCHHHHHHHHHHHHHHHHTTT--TC--CCEEE----------------ESSGGGTCCHHHHHHHHTCT
T ss_pred             CEEEEEECCC-CCCHHHhhHHHHhHHHHHHHhc--CC--eEEEE----------------ECChHHcCCHHHHHHHhCCC
Confidence            5899999999 9999999999999999999998  64  44789                9999999 999999999864


Q ss_pred             C
Q psy158           80 K   80 (116)
Q Consensus        80 ~   80 (116)
                      .
T Consensus       157 ~  157 (166)
T 1tvj_A          157 V  157 (166)
T ss_dssp             T
T ss_pred             c
Confidence            3

>2vac_A Twinfilin-2; transferase, actin binding, phosphorylation, cofilin-like, cytoskeleton, actin-binding, protein tyrosine kinase-9; 1.70A {Homo sapiens}

Probab=99.58  E-value=2.9e-16  Score=110.62  Aligned_cols=55  Identities=20%  Similarity=0.328  Sum_probs=50.1

Q ss_pred             CEEEEEecCCCCCCcccchhhhhccHHHHHHhhhcCceeeehhhhchhhHhhhhhcCcccCCCCCcCCHHHHHH
Q psy158            1 MFVFIYSMPGYSLPIKERMLYSSCKAPLLENLHHLGLTIDKKLKKKKKKKKKKKKKKKFPYNSGSELTEEFLLE   74 (116)
Q Consensus         1 k~vFIys~P~~s~pIKeRMlYSS~K~~l~~~l~~~Gl~i~kkle~~~~~~~~~~~~~~~~~nd~sELtee~l~e   74 (116)
                      ++|||+|||+ ++|||+||||||||+.|.+.|.  |+.+...++                ++|.+||+++.+..
T Consensus        79 k~vfI~w~Pd-~a~vr~KMlYAssk~~lk~~l~--g~~~~~~i~----------------atd~~el~~~~~~~  133 (134)
T 2vac_A           79 EWLFLAWSPD-NSPVRLKMLYAATRATVKKEFG--GGHIKDELF----------------GTVKDDLSFAGYQK  133 (134)
T ss_dssp             EEEEEEECCT-TSCHHHHHHHHHHHHHHHHHHC--GGGEEEEEE----------------ESSHHHHSHHHHHH
T ss_pred             eEEEEEEcCC-CCCHHHHhHHHHHHHHHHHHcC--CCeeeEEEE----------------eCChHHcCHHHHhc
Confidence            5899999999 9999999999999999999998  766666799                99999999998764

>1x67_A Drebrin-like protein; cell-free protein synthesis, actin-binding protein, SH3P7, MABP1, T-cell lymphocyte signaling and regulation; NMR {Homo sapiens}

Probab=99.39  E-value=1.4e-13  Score=98.76  Aligned_cols=56  Identities=14%  Similarity=0.207  Sum_probs=51.8

Q ss_pred             CEEEEEecCCCCCCcccchhhhhccHHHHHHhhhcCceeeehhhhchhhHhhhhhcCcccCCCCCcCCHHHHHHHhC
Q psy158            1 MFVFIYSMPGYSLPIKERMLYSSCKAPLLENLHHLGLTIDKKLKKKKKKKKKKKKKKKFPYNSGSELTEEFLLEELH   77 (116)
Q Consensus         1 k~vFIys~P~~s~pIKeRMlYSS~K~~l~~~l~~~Gl~i~kkle~~~~~~~~~~~~~~~~~nd~sELtee~l~eel~   77 (116)
                      |+|||.|||+ ++|+++||+|||+++.|.+.|+  |+.+  .|+                ++|.+||+++.|.+++.
T Consensus        85 K~vfI~W~pd-~a~v~~Km~yas~k~~lk~~l~--g~~~--ei~----------------at~~~el~~~~i~~k~~  140 (146)
T 1x67_A           85 KFVLINWTGE-GVNDVRKGACASHVSTMASFLK--GAHV--TIN----------------ARAEEDVEPECIMEKVA  140 (146)
T ss_dssp             EEEEEEEECT-TSCHHHHHHHHHHHHHHHHHTT--TEEE--EEC----------------CCSGGGGCHHHHHHHHH
T ss_pred             eEEEEEECCC-CCChhheeeehhhHHHHHHhcC--CcEE--EEE----------------eCChHHCCHHHHHHHHH
Confidence            6899999999 9999999999999999999998  6654  689                99999999999999875

>1t3y_A Coactosin-like protein; beta sheet, protein binding; 1.15A {Homo sapiens} SCOP: d.109.1.2 PDB: 1t2l_A 1t3x_A 1vfq_A 1tmw_A 1wnj_A 1udm_A 1wm4_A

Probab=99.24  E-value=1.7e-12  Score=93.00  Aligned_cols=57  Identities=19%  Similarity=0.239  Sum_probs=52.1

Q ss_pred             CEEEEEecCCCCCCcccchhhhhccHHHHHHhhhcCceeeehhhhchhhHhhhhhcCcccCCCCCcCCHHHHHHHhCC
Q psy158            1 MFVFIYSMPGYSLPIKERMLYSSCKAPLLENLHHLGLTIDKKLKKKKKKKKKKKKKKKFPYNSGSELTEEFLLEELHP   78 (116)
Q Consensus         1 k~vFIys~P~~s~pIKeRMlYSS~K~~l~~~l~~~Gl~i~kkle~~~~~~~~~~~~~~~~~nd~sELtee~l~eel~P   78 (116)
                      |+|||.|||+ ++|++.||+|||+++.|.+.|+  |+.+  .|+                ++|.+||+++.|.+++..
T Consensus        74 K~vfI~W~pd-~~~~~~K~~~as~k~~vk~~l~--g~~~--~i~----------------a~d~~el~~~~I~~kv~~  130 (141)
T 1t3y_A           74 KFALITWIGE-NVSGLQRAKTGTDKTLVKEVVQ--NFAK--EFV----------------ISDRKELEEDFIKSELKK  130 (141)
T ss_dssp             EEEEEEEECT-TSCHHHHHHHHHHHHHHTTTSC--CCSE--EEE----------------ECSGGGGSHHHHHHHHHH
T ss_pred             eEEEEEECCC-CCCHHHhhhHHHHHHHHHHHhc--ccEE--EEE----------------eCChHHCCHHHHHHHHHh
Confidence            6899999999 9999999999999999999998  6544  589                999999999999998874

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	116
d1vkka_	137	d.109.1.2 (A:) Glia maturation factor gamma, GMF-g	4e-06
d1ak7a_	174	d.109.1.2 (A:) Destrin {Human and pig (Homo sapien	6e-04
d1f7sa_	124	d.109.1.2 (A:) Cofilin (actin depolymerizing facto	0.002
d1t3ya1	130	d.109.1.2 (A:2-131) Coactosin-like protein Cotl1 (	0.003

>d1vkka_ d.109.1.2 (A:) Glia maturation factor gamma, GMF-gamma {Mouse (Mus musculus) [TaxId: 10090]} Length = 137

class: Alpha and beta proteins (a+b)
fold: Gelsolin-like
superfamily: Actin depolymerizing proteins
family: Cofilin-like
domain: Glia maturation factor gamma, GMF-gamma
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 40.6 bits (95), Expect = 4e-06
 Identities = 16/75 (21%), Positives = 28/75 (37%), Gaps = 22/75 (29%)

Query: 2   FVFIYSMPGYSLPIKERMLYSSCKAPLLENLHHLGLTIDKKLKKKKKKKKKKKKKKKFPY 61
             FI+S P      +++M+Y+  K  L                      +  +  K F  
Sbjct: 81  LCFIFSSP-VGCKPEQQMMYAGSKNRL---------------------VQTAELTKVFEI 118

Query: 62  NSGSELTEEFLLEEL 76
            +  +LTE +L E+L
Sbjct: 119 RTTDDLTETWLKEKL 133

>d1ak7a_ d.109.1.2 (A:) Destrin {Human and pig (Homo sapiens) and (Sus scrofa) [TaxId: 9606]} Length = 174

class: Alpha and beta proteins (a+b)
fold: Gelsolin-like
superfamily: Actin depolymerizing proteins
family: Cofilin-like
domain: Destrin
species: Human and pig (Homo sapiens) and (Sus scrofa) [TaxId: 9606]

 Score = 35.4 bits (81), Expect = 6e-04
 Identities = 13/81 (16%), Positives = 26/81 (32%), Gaps = 21/81 (25%)

Query: 2   FVFIYSMPGYSLPIKERMLYSSCKAPLLENLHHLGLTIDKKLKKKKKKKKKKKKKKKFPY 61
            +F    P  + P+K +M+Y+S K  + +    +                    K +   
Sbjct: 108 LMFFLWAPELA-PLKSKMIYASSKDAIKKKFQGI--------------------KHECQA 146

Query: 62  NSGSELTEEFLLEELHPKKTA 82
           N   +L    + E+L      
Sbjct: 147 NGPEDLNRACIAEKLGGSLIV 167

>d1f7sa_ d.109.1.2 (A:) Cofilin (actin depolymerizing factor, ADF) {Plant (Arabidopsis thaliana), ADF1 [TaxId: 3702]} Length = 124

class: Alpha and beta proteins (a+b)
fold: Gelsolin-like
superfamily: Actin depolymerizing proteins
family: Cofilin-like
domain: Cofilin (actin depolymerizing factor, ADF)
species: Plant (Arabidopsis thaliana), ADF1 [TaxId: 3702]

 Score = 32.9 bits (75), Expect = 0.002
 Identities = 6/37 (16%), Positives = 16/37 (43%)

Query: 3   VFIYSMPGYSLPIKERMLYSSCKAPLLENLHHLGLTI 39
           +F  +       ++ +M+Y+S K      L  + + +
Sbjct: 81  IFFIAWCPDIAKVRSKMIYASSKDRFKRELDGIQVEL 117

>d1t3ya1 d.109.1.2 (A:2-131) Coactosin-like protein Cotl1 (Clp) {Human (Homo sapiens) [TaxId: 9606]} Length = 130

class: Alpha and beta proteins (a+b)
fold: Gelsolin-like
superfamily: Actin depolymerizing proteins
family: Cofilin-like
domain: Coactosin-like protein Cotl1 (Clp)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.9 bits (75), Expect = 0.003
 Identities = 13/75 (17%), Positives = 23/75 (30%), Gaps = 21/75 (28%)

Query: 2   FVFIYSMPGYSLPIKERMLYSSCKAPLLENLHHLGLTIDKKLKKKKKKKKKKKKKKKFPY 61
           F  I  +        +R    + K  + E + +                      K+F  
Sbjct: 75  FALITWIGENV-SGLQRAKTGTDKTLVKEVVQNF--------------------AKEFVI 113

Query: 62  NSGSELTEEFLLEEL 76
           +   EL E+F+  EL
Sbjct: 114 SDRKELEEDFIKSEL 128

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	116
d1vkka_	137	Glia maturation factor gamma, GMF-gamma {Mouse (Mu	99.68
d1m4ja_	133	Adf-H domain of twinfilin isoform-1 {Mouse (Mus mu	99.67
d1cfya_	133	Cofilin (actin depolymerizing factor, ADF) {Baker'	99.63
d1cnua_	134	Cofilin (actin depolymerizing factor, ADF) {Acanth	99.61
d1ak7a_	174	Destrin {Human and pig (Homo sapiens) and (Sus scr	99.57
d1q8ga_	166	Cofilin (actin depolymerizing factor, ADF) {Human	99.51
d1f7sa_	124	Cofilin (actin depolymerizing factor, ADF) {Plant	99.46
d1t3ya1	130	Coactosin-like protein Cotl1 (Clp) {Human (Homo sa	99.42
d1hqz1_	139	Cofilin-like domain of actin-binding protein abp1p	99.41

>d1vkka_ d.109.1.2 (A:) Glia maturation factor gamma, GMF-gamma {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Gelsolin-like
superfamily: Actin depolymerizing proteins
family: Cofilin-like
domain: Glia maturation factor gamma, GMF-gamma
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.68  E-value=6.3e-18  Score=120.09  Aligned_cols=55  Identities=27%  Similarity=0.491  Sum_probs=50.5

Q ss_pred             CEEEEEecCCCCCCcccchhhhhccHHHHHHhhhcCceeeehhhhchhhHhhhhhcCcccCCCCCcCCHHHHHHHhC
Q psy158            1 MFVFIYSMPGYSLPIKERMLYSSCKAPLLENLHHLGLTIDKKLKKKKKKKKKKKKKKKFPYNSGSELTEEFLLEELH   77 (116)
Q Consensus         1 k~vFIys~P~~s~pIKeRMlYSS~K~~l~~~l~~~Gl~i~kkle~~~~~~~~~~~~~~~~~nd~sELtee~l~eel~   77 (116)
                      ++|||||||+ ++|||+|||||||+++|++.|+     +.+.+|                ++|.+||++++|.++|.
T Consensus        80 k~vfi~w~Pd-~a~ik~kMlYassk~~l~~~l~-----~~k~ie----------------~~d~del~~e~l~ekl~  134 (137)
T d1vkka_          80 PLCFIFSSPV-GCKPEQQMMYAGSKNRLVQTAE-----LTKVFE----------------IRTTDDLTETWLKEKLA  134 (137)
T ss_dssp             CEEEEEECCT-TSCHHHHHHHHHHHHHHHHHTT-----CCCEEE----------------ESSGGGCCHHHHHHHHH
T ss_pred             cEEEEEECCC-CCChHHhhhhHHHHHHHHHHhC-----CeEEEE----------------eCChHHcCHHHHHHHhh
Confidence            5899999999 9999999999999999999985     456799                99999999999999874

>d1m4ja_ d.109.1.2 (A:) Adf-H domain of twinfilin isoform-1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Gelsolin-like
superfamily: Actin depolymerizing proteins
family: Cofilin-like
domain: Adf-H domain of twinfilin isoform-1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.67  E-value=4.6e-18  Score=119.33  Aligned_cols=57  Identities=19%  Similarity=0.299  Sum_probs=52.9

Q ss_pred             CEEEEEecCCCCCCcccchhhhhccHHHHHHhhhcCceeeehhhhchhhHhhhhhcCcccCCCCCcCCHHHHHHHh
Q psy158            1 MFVFIYSMPGYSLPIKERMLYSSCKAPLLENLHHLGLTIDKKLKKKKKKKKKKKKKKKFPYNSGSELTEEFLLEEL   76 (116)
Q Consensus         1 k~vFIys~P~~s~pIKeRMlYSS~K~~l~~~l~~~Gl~i~kkle~~~~~~~~~~~~~~~~~nd~sELtee~l~eel   76 (116)
                      ++|||||||+ ++|||+||||||||++|.+.|.  |..|.++++                ++|++|||++.+.+.|
T Consensus        76 k~vfI~w~Pd-~a~vk~KMlyASsk~~l~~~l~--g~~i~~~i~----------------a~~~~dl~~~~~~~~l  132 (133)
T d1m4ja_          76 EWIFIAWSPD-HSHVRQKMLYAATRATLKKEFG--GGHIKDEVF----------------GTVKEDVSLHGYKKYL  132 (133)
T ss_dssp             EEEEEEECCT-TSCHHHHHHHHHHHHHHHHHHC--GGGEEEEEE----------------ESSHHHHSHHHHHHHH
T ss_pred             eEEEEEECCC-CCCHHHHHHHHHHHHHHHHHcC--CceEEEEEE----------------eCChHHCCHHHHHHhh
Confidence            4899999999 9999999999999999999998  777889999                9999999999887765

>d1cfya_ d.109.1.2 (A:) Cofilin (actin depolymerizing factor, ADF) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Gelsolin-like
superfamily: Actin depolymerizing proteins
family: Cofilin-like
domain: Cofilin (actin depolymerizing factor, ADF)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.63  E-value=4.6e-17  Score=112.07  Aligned_cols=55  Identities=27%  Similarity=0.478  Sum_probs=50.7

Q ss_pred             CEEEEEecCCCCCCcccchhhhhccHHHHHHhhhcCceeeehhhhchhhHhhhhhcCcccCCCCCcCCHHHHHHHh
Q psy158            1 MFVFIYSMPGYSLPIKERMLYSSCKAPLLENLHHLGLTIDKKLKKKKKKKKKKKKKKKFPYNSGSELTEEFLLEEL   76 (116)
Q Consensus         1 k~vFIys~P~~s~pIKeRMlYSS~K~~l~~~l~~~Gl~i~kkle~~~~~~~~~~~~~~~~~nd~sELtee~l~eel   76 (116)
                      ++|||+|||+ ++|+|.||+||||+++|.+.|.  |+  ...++                ++|.+|||+++|.++|
T Consensus        77 k~vfI~w~Pd-~a~vk~Km~yassk~~l~~~l~--gi--~~~i~----------------~~d~~dl~~e~i~~kl  131 (133)
T d1cfya_          77 KIVFFTWSPD-TAPVRSKMVYASSKDALRRALN--GV--STDVQ----------------GTDFSEVSYDSVLERV  131 (133)
T ss_dssp             EEEEEEECCT-TSCHHHHHHHHHHHHHHHHHCT--TC--CEEEE----------------ESSGGGGSHHHHHHHH
T ss_pred             cEEEEEECCC-CCCHHHheehHhhHHHHHHhcc--Cc--eEEEE----------------ECChHHCCHHHHHHHh
Confidence            5899999999 9999999999999999999998  65  44789                9999999999999887

>d1cnua_ d.109.1.2 (A:) Cofilin (actin depolymerizing factor, ADF) {Acanthamoeba castellanii, actophorin [TaxId: 5755]}

class: Alpha and beta proteins (a+b)
fold: Gelsolin-like
superfamily: Actin depolymerizing proteins
family: Cofilin-like
domain: Cofilin (actin depolymerizing factor, ADF)
species: Acanthamoeba castellanii, actophorin [TaxId: 5755]

Probab=99.61  E-value=1e-16  Score=111.21  Aligned_cols=56  Identities=29%  Similarity=0.522  Sum_probs=51.3

Q ss_pred             CEEEEEecCCCCCCcccchhhhhccHHHHHHhhhcCceeeehhhhchhhHhhhhhcCcccCCCCCcCCHHHHHHHhC
Q psy158            1 MFVFIYSMPGYSLPIKERMLYSSCKAPLLENLHHLGLTIDKKLKKKKKKKKKKKKKKKFPYNSGSELTEEFLLEELH   77 (116)
Q Consensus         1 k~vFIys~P~~s~pIKeRMlYSS~K~~l~~~l~~~Gl~i~kkle~~~~~~~~~~~~~~~~~nd~sELtee~l~eel~   77 (116)
                      ++|||||||+ ++|++.||+||||+++|.+.|.  |+  ...++                ++|.+||+++.|.++|.
T Consensus        77 k~vfI~w~P~-~a~~k~Km~yassk~~l~~~l~--gi--~~~i~----------------~~d~~dL~~~~i~~kl~  132 (134)
T d1cnua_          77 KITFILWAPD-SAPIKSKMMYTSTKDSIKKKLV--GI--QVEVQ----------------ATDAAEISEDAVSERAK  132 (134)
T ss_dssp             EEEEEEECCT-TSCHHHHHHHHHHHHHHHHHST--TC--CEEEE----------------ECSTTTTSHHHHHHHHT
T ss_pred             eEEEEEECCC-CCChhheEEeeccHHHHhhhcc--Cc--eEEEE----------------eCChHHCCHHHHHHHHh
Confidence            5899999999 9999999999999999999998  65  44789                99999999999999874

>d1ak7a_ d.109.1.2 (A:) Destrin {Human and pig (Homo sapiens) and (Sus scrofa) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Gelsolin-like
superfamily: Actin depolymerizing proteins
family: Cofilin-like
domain: Destrin
species: Human and pig (Homo sapiens) and (Sus scrofa) [TaxId: 9606]

Probab=99.57  E-value=3.5e-16  Score=114.49  Aligned_cols=58  Identities=22%  Similarity=0.458  Sum_probs=53.1

Q ss_pred             CEEEEEecCCCCCCcccchhhhhccHHHHHHhhhcCceeeehhhhchhhHhhhhhcCcccCCCCCcCCHHHHHHHhCCC
Q psy158            1 MFVFIYSMPGYSLPIKERMLYSSCKAPLLENLHHLGLTIDKKLKKKKKKKKKKKKKKKFPYNSGSELTEEFLLEELHPK   79 (116)
Q Consensus         1 k~vFIys~P~~s~pIKeRMlYSS~K~~l~~~l~~~Gl~i~kkle~~~~~~~~~~~~~~~~~nd~sELtee~l~eel~P~   79 (116)
                      ++|||||||+ ++|||.|||||||++.|.+.|.  |+  ...+|                ++|.+||+++.|.++|.-.
T Consensus       107 k~vfI~w~Pd-~a~vk~KMlYassk~~lk~~l~--g~--~~~i~----------------a~d~~dl~~~~i~~klg~~  164 (174)
T d1ak7a_         107 ELMFFLWAPE-LAPLKSKMIYASSKDAIKKKFQ--GI--KHECQ----------------ANGPEDLNRACIAEKLGGS  164 (174)
T ss_dssp             CCCCEEECCS-SSCGGGTTTHHHHHHHHHHHCS--CC--SCCEE----------------ESSTTTTCHHHHHHHTTTT
T ss_pred             cEEEEEeCCC-CCChhHhhhhHhhHHHHHHHhc--Ce--eEEEE----------------eCChHHCCHHHHHHHHcCC
Confidence            5899999999 9999999999999999999998  65  45789                9999999999999999843

>d1q8ga_ d.109.1.2 (A:) Cofilin (actin depolymerizing factor, ADF) {Human (Homo sapiens), non-muscle isoform [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Gelsolin-like
superfamily: Actin depolymerizing proteins
family: Cofilin-like
domain: Cofilin (actin depolymerizing factor, ADF)
species: Human (Homo sapiens), non-muscle isoform [TaxId: 9606]

Probab=99.51  E-value=1.5e-15  Score=109.27  Aligned_cols=56  Identities=34%  Similarity=0.594  Sum_probs=48.9

Q ss_pred             CEEEEEecCCCCCCcccchhhhhccHHHHHHhhhcCceeeehhhhchhhHhhhhhcCcccCCCCCcCCHHHHH-HHhC
Q psy158            1 MFVFIYSMPGYSLPIKERMLYSSCKAPLLENLHHLGLTIDKKLKKKKKKKKKKKKKKKFPYNSGSELTEEFLL-EELH   77 (116)
Q Consensus         1 k~vFIys~P~~s~pIKeRMlYSS~K~~l~~~l~~~Gl~i~kkle~~~~~~~~~~~~~~~~~nd~sELtee~l~-eel~   77 (116)
                      ++|||||||+ ++|||+|||||||++.|.+.|.  |+  ...+|                ++|.+||+++.++ |.+.
T Consensus        98 klvfi~w~Pd-~a~ik~KMlYassk~~l~~~l~--g~--~~~i~----------------a~d~~el~~~~~~~eklg  154 (166)
T d1q8ga_          98 DLVFIFWAPE-SAPLKSKMIYASSKDAIKKKLT--GI--KHELQ----------------ANCYEEVKDRCTLAEKLG  154 (166)
T ss_dssp             CEEEEEECCT-TSCGGGTHHHHHHHHHHHHHHT--SC--SEEEE----------------ESSHHHHSCHHHHTTTTT
T ss_pred             cEEEEEEcCC-CCChhheeeeHhhHHHHHHHhc--Cc--cEEEE----------------eCChHHhChhHHHHHHhC
Confidence            5899999999 9999999999999999999998  65  45789                9999999987755 5554

>d1f7sa_ d.109.1.2 (A:) Cofilin (actin depolymerizing factor, ADF) {Plant (Arabidopsis thaliana), ADF1 [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Gelsolin-like
superfamily: Actin depolymerizing proteins
family: Cofilin-like
domain: Cofilin (actin depolymerizing factor, ADF)
species: Plant (Arabidopsis thaliana), ADF1 [TaxId: 3702]

Probab=99.46  E-value=4.4e-15  Score=101.71  Aligned_cols=45  Identities=24%  Similarity=0.450  Sum_probs=40.8

Q ss_pred             CEEEEEecCCCCCCcccchhhhhccHHHHHHhhhcCceeeehhhhchhhHhhhhhcCcccCCCCCc
Q psy158            1 MFVFIYSMPGYSLPIKERMLYSSCKAPLLENLHHLGLTIDKKLKKKKKKKKKKKKKKKFPYNSGSE   66 (116)
Q Consensus         1 k~vFIys~P~~s~pIKeRMlYSS~K~~l~~~l~~~Gl~i~kkle~~~~~~~~~~~~~~~~~nd~sE   66 (116)
                      ++|||||||+ ++|||+||||||||+.|.+.|.  |+  ...+|                +||++|
T Consensus        80 k~vfI~w~Pd-~a~vk~KMlyAssk~~l~~~l~--gi--~~~i~----------------a~d~~E  124 (124)
T d1f7sa_          80 KIFFIAWCPD-IAKVRSKMIYASSKDRFKRELD--GI--QVELQ----------------ATDPTE  124 (124)
T ss_dssp             EEEEEEECCT-TSCHHHHHHHHHHHHHHHTTCT--TC--CEEEE----------------ECCTTC
T ss_pred             cEEEEEECCC-CCCHhHeeeeHhHHHHHHHHhc--Cc--cEEEE----------------eCCCCC
Confidence            5899999999 9999999999999999999998  65  45789                999886

>d1t3ya1 d.109.1.2 (A:2-131) Coactosin-like protein Cotl1 (Clp) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Gelsolin-like
superfamily: Actin depolymerizing proteins
family: Cofilin-like
domain: Coactosin-like protein Cotl1 (Clp)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.42  E-value=1.5e-14  Score=100.54  Aligned_cols=55  Identities=22%  Similarity=0.280  Sum_probs=50.1

Q ss_pred             CEEEEEecCCCCCCcccchhhhhccHHHHHHhhhcCceeeehhhhchhhHhhhhhcCcccCCCCCcCCHHHHHHHh
Q psy158            1 MFVFIYSMPGYSLPIKERMLYSSCKAPLLENLHHLGLTIDKKLKKKKKKKKKKKKKKKFPYNSGSELTEEFLLEEL   76 (116)
Q Consensus         1 k~vFIys~P~~s~pIKeRMlYSS~K~~l~~~l~~~Gl~i~kkle~~~~~~~~~~~~~~~~~nd~sELtee~l~eel   76 (116)
                      |+|||+|||+ ++|++.||+|||+++.|.+.|.  |+.  ..++                ++|.+|||++.|.++|
T Consensus        74 K~vfI~w~p~-~~~~~~Km~~ss~~~~ik~~l~--~~~--~~i~----------------a~~~~el~~~~i~~kl  128 (130)
T d1t3ya1          74 KFALITWIGE-NVSGLQRAKTGTDKTLVKEVVQ--NFA--KEFV----------------ISDRKELEEDFIKSEL  128 (130)
T ss_dssp             EEEEEEEECT-TSCHHHHHHHHHHHHHHTTTSC--CCS--EEEE----------------ECSGGGGSHHHHHHHH
T ss_pred             cEEEEEeCCC-cCCHhHeeehHHhHHHHHHhcC--Cce--EEEE----------------ECChHHCCHHHHHHHh
Confidence            5899999999 9999999999999999999998  543  3689                9999999999999886

>d1hqz1_ d.109.1.2 (1:) Cofilin-like domain of actin-binding protein abp1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Gelsolin-like
superfamily: Actin depolymerizing proteins
family: Cofilin-like
domain: Cofilin-like domain of actin-binding protein abp1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.41  E-value=3.7e-14  Score=100.20  Aligned_cols=58  Identities=24%  Similarity=0.353  Sum_probs=51.0

Q ss_pred             CEEEEEecCCCCCCcccchhhhhccHHHHHHh-hhcCceeeehhhhchhhHhhhhhcCcccCCCCCcCCHHHHHHHhCCC
Q psy158            1 MFVFIYSMPGYSLPIKERMLYSSCKAPLLENL-HHLGLTIDKKLKKKKKKKKKKKKKKKFPYNSGSELTEEFLLEELHPK   79 (116)
Q Consensus         1 k~vFIys~P~~s~pIKeRMlYSS~K~~l~~~l-~~~Gl~i~kkle~~~~~~~~~~~~~~~~~nd~sELtee~l~eel~P~   79 (116)
                      |+|||+|||+ ++|++.||+|||+++.+.+++ +  |+  ...|+                ++|.+|||++.|+++|...
T Consensus        78 K~vfI~W~pd-~a~~~~Km~yas~~~~v~k~~l~--~~--~~~i~----------------a~~~~dl~~e~i~~kl~~a  136 (139)
T d1hqz1_          78 KIIIIGWCPD-SAPLKTRASFAANFAAVANNLFK--GY--HVQVT----------------ARDEDDLDENELLMKISNA  136 (139)
T ss_dssp             EEEEEEECCT-TSCHHHHHHHHHHHHHHHHHTSC--SC--SEEEE----------------ESSGGGGCHHHHHHHHHTC
T ss_pred             cEEEEEEcCC-CCCHhHhhheeccHHHHHHHhcC--Cc--eEEEE----------------eCChHHCCHHHHHHHHHhc
Confidence            6899999999 999999999999999998774 5  43  44689                9999999999999998753