Psyllid ID: psy16816

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470
Protein Sequence
MTKSECNTVNICSFLNVLLSRFQRHALGCFVLILVDILWALSSEIVKKVDQHVEDESYFTDQTEPPGELKFPLHNLFIQVFLLVSIKKLQSASRGLHGKVLFSGRSSGTESETENSMRKHVRFSKLTERPQVLGVPASFLMEAPVRHLSDKEANEALLARLSYQATLRTADFTFIQSTKYNIPQVAKVAFVFSFLRFGAEYTFTLLGAEAGTVALIYSSSSVLTLLICAFFPSSSSDKFSLSKCVTVCISVCGLILVTISDVYMEHLHIPSGSFLSLVSALFYSLYIVFLRRLEHEEKLDIVLFYGFVGLYNCLLLWPLFFLLHYNSWEVFSLPDRDQWVILLIEGLIGSVLTETLWLWGMLLTSPLIATLGLGLIVPLSMIANTSLYHVTYPRLFYVGAVPVVFAFVASILLAQMASRDPVLEILLSCVTSLSGPSLGRTSKKISDADSEQRESLININMCDQEVDHEA
Secondary Structure (PSIPRED)
cccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccEEEEcccHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHccHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHcEEEEEccccccccccccHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHccHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHccccccccccccccccHHHHHHccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccEEccccccEEEEEEcccEEEEEHHHHHHHHHHHHHccccccHHHHcccccccccccccccccccccccccccccccccccccccccHccccccHHHHHHHccccccccHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHcHccccccEcHHHHHHHHHHHHcEEEEEcccccccccccHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHEEEEHHHHHHHHHHHHHHHHHHHcccHHEEEHHHEHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHcccccEEEEEcccccHHHHccHcccccccccccccc
Coil and Loop (DISEMBL)
mtksecntvNICSFLNVLLSRFQRHALGCFVLILVDILWALSSEIVKKVDqhvedesyftdqteppgelkfplhnLFIQVFLLVSIKKLQsasrglhgkvlfsgrssgtesetensmrkhvrfsklterpqvlgvpasflmeapvrhlsdKEANEALLARLSYQATLRTADFTFiqstkynipqvAKVAFVFSFLRFGAEYTFTLLGAEAGTVALIYSSSSVLTLLICaffpssssdkfslskCVTVCISVCGLILVTISDVymehlhipsgSFLSLVSALFYSLYIVFLRRLEHEEKLDIVLFYGFVGLYNCLLLWPLFFLLHynswevfslpdrDQWVILLIEGLIGSVLTETLWLWGMLLTSPLIATLGLGLivplsmiantslyhvtyprlfyvGAVPVVFAFVASILLAQMASRDPVLEILLSCVtslsgpslgrtskkisdadSEQRESLINInmcdqevdhea
Flexible Loop (DISEMBL)
MTKSECNTVNICSFLNVLLSRFQRHALGCFVLILVDILWALSSEIVKKVDQHVEDESYFTDQTEPPGELKFPLHNLFIQVFLLVSIKKLQsasrglhgkvlfsgrssgtesetensmrkhvrfsklterpqvlgvpASFLMEAPVRHLSDKEANEALLARLSYQATLRTADFTFIQSTKYNIPQVAKVAFVFSFLRFGAEYTFTLLGAEAGTVALIYSSSSVLTLLICAFFPSSSSDKFSLSKCVTVCISVCGLILVTISDVYMEHLHIPSGSFLSLVSALFYSLYIVFLRRLEHEEKLDIVLFYGFVGLYNCLLLWPLFFLLHYNSWEVFSLPDRDQWVILLIEGLIGSVLTETLWLWGMLLTSPLIATLGLGLIVPLSMIANTSLYHVTYPRLFYVGAVPVVFAFVASILLAQMASRDPVLEILLSCVtslsgpslgrtskkisdadseqreslininmcdqevdhea
Low Complexity Region (SEG)
MTKSECNTVNICSFLNVLLSRFQRHALGCFVLILVDILWALSSEIVKKVDQHVEDESYFTDQTEPPGELKFPLHNLFIQVFLLVSIKKLQSASRGLHGKVLFsgrssgtesetensMRKHVRFSKLTERPQVLGVPASFLMEAPVRHLSDKEANEALLARLSYQATLRTADFTFIQSTKYNIPQVAKVAFVFSFLRFGAEYTFTLLGAEAGTVALIYSSSSVLTLLICAffpssssdkfslsKCVTVCISVCGLILVTISDVYMEHLHIPSGSFLSLVSALFYSLYIVFLRRLEHEEKLDIVLFYGFVGLYNClllwplffllHYNSWEVFSLPDRDQWVILLIEGLIGSVLTETLWLWGMLLTSPLIATLGLGLIVPLSMIANTSLYHVTYPRLfyvgavpvvfafvaSILLAQMASRDPVLEILLSCVTSLSGPSLGRTSKKISDADSEQRESLININMCDQEVDHEA
Disordered region (IsUnstruct)
*****CNTVNICSFLNVLLSRFQRHALGCFVLILVDILWALSSEIVKKVDQHVEDESYFTD*****GELKFPLHNLFIQVFLLVSIKKLQSASRGLHGKVL******************************VLGVPASFLMEAPVRHL***EANEALLARLSYQATLRTADFTFIQSTKYNIPQVAKVAFVFSFLRFGAEYTFTLLGAEAGTVALIYSSSSVLTLLICAFFPSSSSDKFSLSKCVTVCISVCGLILVTISDVYMEHLHIPSGSFLSLVSALFYSLYIVFLRRLEHEEKLDIVLFYGFVGLYNCLLLWPLFFLLHYNSWEVFSLPDRDQWVILLIEGLIGSVLTETLWLWGMLLTSPLIATLGLGLIVPLSMIANTSLYHVTYPRLFYVGAVPVVFAFVASILLAQMASRDPVLEILLSCVTSL*************************************
Disordered Region (DISOPRED)
************SFLNVLLSRFQRHALGCFVLILVDILWALSSEIVKKVDQHVEDESYFTDQTEPPGELKFPLHNLFIQVFLLVSIKKLQSASRGLHGKVLF************************************************************************IQSTKYNIPQVAKVAFVFSFLRFGAEYTFTLLGAEAGTVALIYSSSSVLTLLICAFFPSSSSDKFSLSKCVTVCISVCGLILVTISDVYMEHLHIPSGSFLSLVSALFYSLYIVFLRRLEHEEKLDIVLFYGFVGLYNCLLLWPLFFLLHYNSWEVFSLPDRDQWVILLIEGLIGSVLTETLWLWGMLLTSPLIATLGLGLIVPLSMIANTSLYHVTYPRLFYVGAVPVVFAFVASILLAQMASRDPVLEILLSCVTSLSG***********************************
Disordered Region (DISEMBL)
MTKSECNTVNICSFLNVLLSRFQRHALGCFVLILVDILWALSSEIVKKVDQHVEDESYFTDQTEPPGELKFPLHNLFIQVFLLVSIKKLQSASRGLHGKVLFSG**************KHVRFSKLTERPQVLGVPASFLMEAPVRHLSDKEANEALLARLSYQATLRTADFTFIQSTKYNIPQVAKVAFVFSFLRFGAEYTFTLLGAEAGTVALIYSSSSVLTLLICAFFPSSSSDKFSLSKCVTVCISVCGLILVTISDVYMEHLHIPSGSFLSLVSALFYSLYIVFLRRLEHEEKLDIVLFYGFVGLYNCLLLWPLFFLLHYNSWEVFSLPDRDQWVILLIEGLIGSVLTETLWLWGMLLTSPLIATLGLGLIVPLSMIANTSLYHVTYPRLFYVGAVPVVFAFVASILLAQMASRDPVLEILLSCVTSLS******************RESLININMCDQEVDHEA
Disordered Region (DISPRO)
******************LSRFQRHALGCFVLILVDILWALSSEIVKKVDQHVEDESYFTDQTEPPGELKFPLHNLFIQVFLLVSIKKLQSASRGL*********************************************************************************TKYNIPQVAKVAFVFSFLRFGAEYTFTLLGAEAGTVALIYSSSSVLTLLICAFFPSSSSDKFSLSKCVTVCISVCGLILVTISDVYMEHLHIPSGSFLSLVSALFYSLYIVFLRRLEHEEKLDIVLFYGFVGLYNCLLLWPLFFLLHYNSWEVFSLPDRDQWVILLIEGLIGSVLTETLWLWGMLLTSPLIATLGLGLIVPLSMIANTSLYHVTYPRLFYVGAVPVVFAFVASILLAQMASRDPVLEILLSCVTSLSGPSLGRTSKKISDAD*********************
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MTKSECNTVNICSFLNVLLSRFQRHALGCFVLILVDILWALSSEIVKKVDQHVEDESYFTDQTEPPGELKFPLHNLFIQVFLLVSIKKLQSASRGLHGKVLFSGRSSGTESETENSMRKHVRFSKLTERPQVLGVPASFLMEAPVRHLSDKEANEALLARLSYQATLRTADFTFIQSTKYNIPQVAKVAFVFSFLRFGAEYTFTLLGAEAGTVALIYSSSSVLTLLICAFFPSSSSDKFSLSKCVTVCISVCGLILVTISDVYMEHLHIPSGSFLSLVSALFYSLYIVFLRRLEHEEKLDIVLFYGFVGLYNCLLLWPLFFLLHYNSWEVFSLPDRDQWVILLIEGLIGSVLTETLWLWGMLLTSPLIATLGLGLIVPLSMIANTSLYHVTYPRLFYVGAVPVVFAFVASILLAQMASRDPVLEILLSCVTSLSGPSLGRTSKKISDADSEQRESLININMCDQEVDHEA
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	470	2.2.26 [Sep-21-2011]
A6QL92	524	Solute carrier family 35	yes	N/A	0.906	0.812	0.360	3e-63
Q8R314	524	Solute carrier family 35	yes	N/A	0.914	0.820	0.364	5e-63
Q8WV83	523	Solute carrier family 35	yes	N/A	0.919	0.826	0.355	7e-62
Q5R6J3	523	Solute carrier family 35	yes	N/A	0.908	0.816	0.351	1e-61
Q4R794	432	Solute carrier family 35	N/A	N/A	0.714	0.777	0.379	6e-57
Q03730	393	Uncharacterized vacuolar	yes	N/A	0.704	0.842	0.263	4e-23
O94654	341	Uncharacterized transport	yes	N/A	0.485	0.668	0.298	3e-13
Q04083	370	Thiamine-repressible mito	no	N/A	0.368	0.467	0.282	8e-12

>sp|A6QL92|S35F5_BOVIN Solute carrier family 35 member F5 OS=Bos taurus GN=SLC35F5 PE=2 SV=1

 Score =  243 bits (619), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 170/471 (36%), Positives = 254/471 (53%), Gaps = 45/471 (9%)

Query: 23  QRHALGCFVLILVDILWALSSEIVKKVDQHVEDESYFTDQTEPPGELKFPLHNLFIQVFL 82
           +R ALG  +L+LVD++W  SSE+           SY   Q   P    F   ++F+   L
Sbjct: 67  KRMALGIVILLLVDVIWVASSELT----------SYVFTQYNKPFFSTFAKTSMFVLYLL 116

Query: 83  LVSIKK--LQSASRGLHGK-VLFSGRSSG-----TESETENS-----MRKHVRFSKL-TE 128
              + K   Q  +RG  GK   F   + G     T   T NS     +   V+F  L +E
Sbjct: 117 GFIVWKPWRQQCTRGFRGKHATFFADAEGYFAACTTDTTMNSSLSEPLYVPVKFHDLPSE 176

Query: 129 RPQVLGVPA-----------SFLMEAPVRHLSDKEANEALLARLSYQATLRTADFTFIQS 177
           +P+   +             S +ME  +R L    A EA L+R+SY  T++  +      
Sbjct: 177 KPENTNIDTEKIPKKSRVRFSNIME--IRQLPSSHALEAKLSRMSY-PTVKEQESLLKTV 233

Query: 178 TKYNIPQVAKVAFVFSFLRFGAEYTF--TLLGAEAGTVALIYSSSSVLTLLICAFFPSSS 235
            K    QVAK++F F F+ F A +++   L   +   V ++ S+S + TL++ A FPS+S
Sbjct: 234 GKLTATQVAKISFFFCFVWFLANFSYQEALSDTQVAIVNILSSTSGLFTLILAAMFPSNS 293

Query: 236 SDKFSLSKCVTVCISVCGLILVTISDVYMEHLHIPSGSFLSLVSALFYSLYIVFLRR-LE 294
            D+F+LSK + V +S+ G++LV +S           GS  SLV A+ Y++YIV ++R ++
Sbjct: 294 GDRFTLSKLLAVILSIGGVVLVNLSGSEKSPGRNTIGSIWSLVGAMLYAVYIVMIKRKVD 353

Query: 295 HEEKLDIVLFYGFVGLYNCLLLWPLFFLLHYNSWEVFSLPDRDQWVILLIEGLIGSVLTE 354
            E+KLDI +F+GFVGL+N LLLWP FFLLHY  +E F  P++   + ++I GLIG+VL+E
Sbjct: 354 REDKLDIPMFFGFVGLFNLLLLWPGFFLLHYTGFEDFEFPNKVVLMCIVINGLIGTVLSE 413

Query: 355 TLWLWGMLLTSPLIATLGLGLIVPLSMIANTSLYHVTYPRLFYVGAVPVVFAFVASILLA 414
            LWLWG  LTS LI TL L L +PLS+IA+  +  V +  LF+ GA+PV F+F  + LL 
Sbjct: 414 FLWLWGCFLTSSLIGTLALSLTIPLSIIADMCMQKVQFSWLFFAGAIPVFFSFFIATLLC 473

Query: 415 QMASRDPVLEILLSCVTSLSGPSLGRTSKKISDADSEQRESLININMCDQE 465
              + DPV+  +      +         +K+ + DSEQ ESLI ++   QE
Sbjct: 474 HYNNWDPVMVGIRRIFAFICRK---HRIQKVPE-DSEQCESLIPMHGVSQE 520

Putative solute transporter.
Bos taurus (taxid: 9913)

>sp|Q8R314|S35F5_MOUSE Solute carrier family 35 member F5 OS=Mus musculus GN=Slc35f5 PE=2 SV=1

 Score =  242 bits (617), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 173/475 (36%), Positives = 253/475 (53%), Gaps = 45/475 (9%)

Query: 19  LSRFQRHALGCFVLILVDILWALSSEIVKKVDQHVEDESYFTDQTEPPGELKFPLHNLFI 78
            S+ +R ALG  +L+LVD++W  SSE+           SY   Q   P    F   ++F+
Sbjct: 63  FSQRRRMALGIVILLLVDVIWVASSELT----------SYVFTQYNKPFFSTFAKTSMFV 112

Query: 79  QVFLLVSIKK--LQSASRGLHGK-VLFSGRSSG--TESETENSMRKH--------VRFSK 125
              L   I K   Q  +RG  GK   F   + G      T+ SM           V+F  
Sbjct: 113 LYLLGFIIWKPWRQQCTRGFRGKPAAFFADAEGYFAACTTDTSMSSSLSEPLYVPVKFHD 172

Query: 126 L-----------TER-PQVLGVPASFLMEAPVRHLSDKEANEALLARLSYQATLRTADFT 173
           L           TE+ P+   V  S +ME  +R L    A EA L+R+SY  T++  +  
Sbjct: 173 LPSEKLESTNIGTEKTPKKSRVRFSNIME--IRQLPSSHALEAKLSRMSY-PTVKDQESI 229

Query: 174 FIQSTKYNIPQVAKVAFVFSFLRFGAE--YTFTLLGAEAGTVALIYSSSSVLTLLICAFF 231
                K    QVAK++F F F+ F A   Y   L   +   V ++ S+S + TL++ A F
Sbjct: 230 LKTVGKLTATQVAKISFFFCFVWFLANLSYQEALSDTQVAIVNILSSTSGLFTLILAAVF 289

Query: 232 PSSSSDKFSLSKCVTVCISVCGLILVTISDVYMEHLHIPSGSFLSLVSALFYSLYIVFLR 291
           PS+S D+F+LSK + V +S+ G++LV +S           GS  SL  A+FY++YIV ++
Sbjct: 290 PSNSGDRFTLSKLLAVILSIGGVVLVNLSGSEKSAGRDTIGSIWSLAGAMFYAVYIVMIK 349

Query: 292 R-LEHEEKLDIVLFYGFVGLYNCLLLWPLFFLLHYNSWEVFSLPDRDQWVILLIEGLIGS 350
           R ++ E+KLDI +F+GFVGL+N LLLWP FFLLHY  +E F  P++   + ++I GLIG+
Sbjct: 350 RKVDREDKLDIPMFFGFVGLFNLLLLWPGFFLLHYTGFEDFEFPNKVVLLCIIINGLIGT 409

Query: 351 VLTETLWLWGMLLTSPLIATLGLGLIVPLSMIANTSLYHVTYPRLFYVGAVPVVFAFVAS 410
           VL+E LWLWG  LTS LI TL L L +PLS+IA+  +  V +  LF+ GA+PV F+F   
Sbjct: 410 VLSEFLWLWGCFLTSSLIGTLALSLTIPLSIIADMCMQKVQFSWLFFAGAIPVFFSFFIV 469

Query: 411 ILLAQMASRDPVLEILLSCVTSLSGPSLGRTSKKISDADSEQRESLININMCDQE 465
            LL    + DPV+  +      +         +++ + DSEQ ESLI+++   QE
Sbjct: 470 TLLCHYNNWDPVMVGVRRVFAFICRK---HRIQRVPE-DSEQCESLISMHSVSQE 520

Putative solute transporter.

Mus musculus (taxid: 10090)

>sp|Q8WV83|S35F5_HUMAN Solute carrier family 35 member F5 OS=Homo sapiens GN=SLC35F5 PE=2 SV=1

 Score =  238 bits (607), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 170/478 (35%), Positives = 254/478 (53%), Gaps = 46/478 (9%)

Query: 16  NVLLSRFQRHALGCFVLILVDILWALSSEIVKKVDQHVEDESYFTDQTEPPGELKFPLHN 75
           N   ++ +R ALG  +L+LVD++W  SSE+           SY   Q   P    F   +
Sbjct: 60  NSGFTQRRRMALGIVILLLVDVIWVASSELT----------SYVFTQYNKPFFSTFAKTS 109

Query: 76  LFIQVFLLVSIKK--LQSASRGLHGK-VLFSGRSSG-----TESETENS-----MRKHVR 122
           +F+   L   I K   Q  +RGL GK   F   + G     T   T NS     +   V+
Sbjct: 110 MFVLYLLGFIIWKPWRQQCTRGLRGKHAAFFADAEGYFAACTTDTTMNSSLSEPLYVPVK 169

Query: 123 FSKL-TERPQVLGVPA-----------SFLMEAPVRHLSDKEANEALLARLSYQATLRTA 170
           F  L +E+P+   +             S +ME  +R L    A EA L+R+SY   ++  
Sbjct: 170 FHDLPSEKPESTNIDTEKTPKKSRVRFSNIME--IRQLPSSHALEAKLSRMSY--PVKEQ 225

Query: 171 DFTFIQSTKYNIPQVAKVAFVFSFLRFGAE--YTFTLLGAEAGTVALIYSSSSVLTLLIC 228
           +       K    QVAK++F F F+ F A   Y   L   +   V ++ S+S + TL++ 
Sbjct: 226 ESILKTVGKLTATQVAKISFFFCFVWFLANLSYQEALSDTQVAIVNILSSTSGLFTLILA 285

Query: 229 AFFPSSSSDKFSLSKCVTVCISVCGLILVTISDVYMEHLHIPSGSFLSLVSALFYSLYIV 288
           A FPS+S D+F+LSK + V +S+ G++LV ++           GS  SL  A+ Y++YIV
Sbjct: 286 AVFPSNSGDRFTLSKLLAVILSIGGVVLVNLAGSEKPAGRDTVGSIWSLAGAMLYAVYIV 345

Query: 289 FLRR-LEHEEKLDIVLFYGFVGLYNCLLLWPLFFLLHYNSWEVFSLPDRDQWVILLIEGL 347
            ++R ++ E+KLDI +F+GFVGL+N LLLWP FFLLHY  +E F  P++   + ++I GL
Sbjct: 346 MIKRKVDREDKLDIPMFFGFVGLFNLLLLWPGFFLLHYTGFEDFEFPNKVVLMCIIINGL 405

Query: 348 IGSVLTETLWLWGMLLTSPLIATLGLGLIVPLSMIANTSLYHVTYPRLFYVGAVPVVFAF 407
           IG+VL+E LWLWG  LTS LI TL L L +PLS+IA+  +  V +  LF+ GA+PV F+F
Sbjct: 406 IGTVLSEFLWLWGCFLTSSLIGTLALSLTIPLSIIADMCMQKVQFSWLFFAGAIPVFFSF 465

Query: 408 VASILLAQMASRDPVLEILLSCVTSLSGPSLGRTSKKISDADSEQRESLININMCDQE 465
               LL    + DPV+  +      +         +++ + DSEQ ESLI+++   QE
Sbjct: 466 FIVTLLCHYNNWDPVMVGIRRIFAFICRK---HRIQRVPE-DSEQCESLISMHSVSQE 519

Putative solute transporter.

Homo sapiens (taxid: 9606)

>sp|Q5R6J3|S35F5_PONAB Solute carrier family 35 member F5 OS=Pongo abelii GN=SLC35F5 PE=2 SV=1

 Score =  238 bits (606), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 170/483 (35%), Positives = 258/483 (53%), Gaps = 56/483 (11%)

Query: 16  NVLLSRFQRHALGCFVLILVDILWALSSEIVKKVDQHVEDESYFTDQTEPPGELKFPLHN 75
           N   ++ +R ALG  +L+LVD++W  SSE+           SY   Q   P    F   +
Sbjct: 60  NSGFTQRRRMALGIVILLLVDVIWVASSELT----------SYVFTQYNKPFFSTFAKTS 109

Query: 76  LFIQVFLLVSIKK--LQSASRGLHGK-VLFSGRSSG------TESETENSMRKH----VR 122
           +F+   L   I K   Q  +RGL GK   F   + G      T++   +S+ +     V+
Sbjct: 110 MFVLYLLGFIIWKPWRQQCTRGLRGKHAAFFADAEGYFAACATDTTMNSSLSEPLYVPVK 169

Query: 123 FSKL-TERPQVLGVPA-----------SFLMEAPVRHLSDKEANEALLARLSY-----QA 165
           F  L +E+P+   +             S +ME  +R L    A E+ L+R+SY     ++
Sbjct: 170 FHDLPSEKPESTNIDTEKTPKKSRVRFSNIME--IRQLPSNHALESKLSRMSYPVKEQES 227

Query: 166 TLRTADFTFIQSTKYNIPQVAKVAFVFSFLRFGAE--YTFTLLGAEAGTVALIYSSSSVL 223
            L+T         K    QVAK++F F F+ F A   Y   L   +   V ++ S+S + 
Sbjct: 228 ILKTVG-------KLTATQVAKISFFFCFVWFLANLSYQEALSDTQVAIVNILSSTSGLF 280

Query: 224 TLLICAFFPSSSSDKFSLSKCVTVCISVCGLILVTISDVYMEHLHIPSGSFLSLVSALFY 283
           TL++ A FPS+S D+F+LSK + V +S+ G++LV +S           GS  SL  A+ Y
Sbjct: 281 TLILAAVFPSNSGDRFTLSKLLAVILSIGGVVLVNLSGSEKSAGRDTIGSIWSLAGAMLY 340

Query: 284 SLYIVFLRR-LEHEEKLDIVLFYGFVGLYNCLLLWPLFFLLHYNSWEVFSLPDRDQWVIL 342
           ++YIV ++R ++ E+KLDI +F+GFVGL+N LLLWP FFLLHY  +E F  P++   + +
Sbjct: 341 AVYIVMIKRKVDREDKLDIPMFFGFVGLFNLLLLWPGFFLLHYTGFEDFEFPNKVVLMCI 400

Query: 343 LIEGLIGSVLTETLWLWGMLLTSPLIATLGLGLIVPLSMIANTSLYHVTYPRLFYVGAVP 402
           +I GLIG+VL+E LWLWG  LTS LI TL L L +PLS+IA+  +  V +  LF+ GA+P
Sbjct: 401 IINGLIGTVLSEFLWLWGCFLTSSLIGTLALSLTIPLSIIADMCMQKVQFSWLFFAGAIP 460

Query: 403 VVFAFVASILLAQMASRDPVLEILLSCVTSLSGPSLGRTSKKISDADSEQRESLININMC 462
           V F+F    LL    + DPV+  +      +         +++ + DSEQ ESLI+++  
Sbjct: 461 VFFSFFIVTLLCHYNNWDPVMVGIRRIFAFICRK---HRIQRVPE-DSEQCESLISMHSV 516

Query: 463 DQE 465
            QE
Sbjct: 517 SQE 519

Putative solute transporter.

Pongo abelii (taxid: 9601)

>sp|Q4R794|S35F5_MACFA Solute carrier family 35 member F5 OS=Macaca fascicularis GN=SLC35F5 PE=2 SV=1

 Score =  222 bits (565), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 141/372 (37%), Positives = 209/372 (56%), Gaps = 36/372 (9%)

Query: 103 SGRSSGTESETENSMRK-HVRFSKLTERPQVLGVPASFLMEAPVRHLSDKEANEALLARL 161
           S +   T  +TE + +K  VRFS + E                +R L    A EA L+R+
Sbjct: 84  SEKPESTNIDTEKTPKKSRVRFSNIME----------------IRQLPSSHALEAKLSRM 127

Query: 162 SY-----QATLRTADFTFIQSTKYNIPQVAKVAFVFSFLRFGAE--YTFTLLGAEAGTVA 214
           SY     ++ L+T         K    QVAK++F F F+ F A   Y   L   +   V 
Sbjct: 128 SYPVKEQESILKTVG-------KLTATQVAKISFFFCFVWFLANLSYQEALSDTQVAIVN 180

Query: 215 LIYSSSSVLTLLICAFFPSSSSDKFSLSKCVTVCISVCGLILVTISDVYMEHLHIPSGSF 274
           ++ S+S + TL++ A FPS+S D+F+LSK + V +S+ G++LV +S           GS 
Sbjct: 181 ILSSTSGLFTLILAAVFPSNSGDRFTLSKLLAVILSIGGVVLVNLSGSEKSAGRNTIGSI 240

Query: 275 LSLVSALFYSLYIVFLRR-LEHEEKLDIVLFYGFVGLYNCLLLWPLFFLLHYNSWEVFSL 333
            SL  A+ Y++YIV ++R ++ E+KLDI +F+GFVGL+N LLLWP FFLLHY  +E F  
Sbjct: 241 WSLAGAMLYAVYIVMIKRKVDREDKLDIPMFFGFVGLFNLLLLWPGFFLLHYTGFEDFEF 300

Query: 334 PDRDQWVILLIEGLIGSVLTETLWLWGMLLTSPLIATLGLGLIVPLSMIANTSLYHVTYP 393
           P++   + ++I GLIG+VL+E LWLWG  LTS LI TL L L +PLS+IA+  +  V + 
Sbjct: 301 PNKVVLMCIIINGLIGTVLSEFLWLWGCFLTSSLIGTLALSLTIPLSIIADMCMQKVQFS 360

Query: 394 RLFYVGAVPVVFAFVASILLAQMASRDPVLEILLSCVTSLSGPSLGRTSKKISDADSEQR 453
            LF+ GA+PV F+F    LL    + DPV+  +      +         +++ + DSEQ 
Sbjct: 361 WLFFAGAIPVFFSFFIVTLLCHYNNWDPVMVGIRRIFAFICRK---HRIQRVPE-DSEQC 416

Query: 454 ESLININMCDQE 465
           ESLI+++   QE
Sbjct: 417 ESLISMHSVSQE 428

Putative solute transporter.

Macaca fascicularis (taxid: 9541)

>sp|Q03730|YMB8_YEAST Uncharacterized vacuolar membrane protein YML018C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YML018C PE=1 SV=1

 Score =  109 bits (273), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 107/406 (26%), Positives = 181/406 (44%), Gaps = 75/406 (18%)

Query: 23  QRHALGCFVLILVDILWALSSEIVKKVDQHVEDESYFTDQTEPPGELKFPLHNLFIQVFL 82
           +R  LG  +L LV ILW LSS ++  +    ED+SY       P  + +     FI  +L
Sbjct: 11  KRWTLGLLMLGLVIILWVLSSFLINLI---FEDDSY-----RKPFFITYTNTAAFI-FYL 61

Query: 83  LVSIKKL-----QSASRGLHGKVLFSGRSSGTESETENSMRKHVRFSKLTERPQVLGVPA 137
             + K +      +    +H +++     +G++S     M            P +  + A
Sbjct: 62  FPTAKAVVVNYKDTGRANVHRELIMEEEGTGSDSNRSVDMTS----------PLLTNLEA 111

Query: 138 SFLMEAPVRHLSDKEANEALLARLSYQATLR-TADFTFIQSTKYNIPQVAKVAFVFSFLR 196
                    H + K+       RL+   T++ +A+F  +  T  N+   A +AF      
Sbjct: 112 G-------THANQKK-------RLTLYETIKLSAEFCILWFTA-NLVTNASLAF------ 150

Query: 197 FGAEYTFTLLGAEAGTVALIYSSSSVLTLLICAFFPSSSSDKFSLSKCVTVCISVCGLIL 256
                          +  ++ ++SS  TL I A     S  K   SK +   IS  G+I+
Sbjct: 151 -----------TSVASQTILSTTSSFFTLFIGAICHVESLSK---SKVLGSFISFVGIIM 196

Query: 257 VTISDV---YMEHL-----------HIPSGSFLSLVSALFYSLYIVFLRR-LEHEEKLDI 301
           VT SD    Y  H+            +  G+ L+L  A+ Y +Y   L+R +  E ++++
Sbjct: 197 VTKSDSHQRYQRHIADVSGDDNDAVQVLIGNLLALAGAVLYGVYSTLLKREVGDETRVNM 256

Query: 302 VLFYGFVGLYNCLLLWPLFFLLHYNSWEVFSLPDRDQWVILLIEGLIGSVLTETLWLWGM 361
            +F+GFVGL+N L LWP   +L +  WE FSLP   + V+++    + + +++  W   M
Sbjct: 257 KIFFGFVGLFNLLFLWPSLIVLDFFGWEPFSLPKDPKVVVIIFVNCLITFVSDFCWAKAM 316

Query: 362 LLTSPLIATLGLGLIVPLSMIANTSLYHVTYPRLFYVGAVPVVFAF 407
           LLTSPL  T+GL + +PL+M  +    H T   L+  GA  ++ +F
Sbjct: 317 LLTSPLTVTVGLSITIPLAMFGDVIFKHKTMSALYLFGATLILGSF 362

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

>sp|O94654|YGF3_SCHPO Uncharacterized transporter C405.03c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC405.03c PE=3 SV=1

 Score = 77.0 bits (188), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 75/251 (29%), Positives = 125/251 (49%), Gaps = 23/251 (9%)

Query: 147 HLSDKEANE-ALLARLSYQATLRTADFTFIQSTKYNIP----QVAKVAFVFSFLRFGAEY 201
           + S+K+  +  L++ LS   ++  + F     T+ N P    Q A ++  F  + F A Y
Sbjct: 61  YFSEKKTRKHRLMSELSMYESVHDSSFNL--GTRPNSPLGFRQTAYLSLGFCIIWFAANY 118

Query: 202 -TFTLLG-AEAGTVALIYSSSSVLTLLICAFFPSSSSDKFSLSKCVTVCISVCGLILVTI 259
            + + LG     +  +I S S   TL +       + ++F+LSK + +  SV G+I+V  
Sbjct: 119 FSNSSLGFTNVASFTIISSMSGFFTLGLGTIV---NVERFTLSKLLALMASVGGVIIVVT 175

Query: 260 SDVYMEHLH--IPSGSFLSLVSALF-------YSLYIVFLRRLEHEEKLDIVLFYGFVGL 310
            D     L+   PS   L    AL        YS+ + F   +  E  +   LF+G VGL
Sbjct: 176 QDAKQADLNDSPPSRPALGNAYALLAALLYGCYSVMVKF--HITEESCVSTRLFFGLVGL 233

Query: 311 YNCLLLWPLFFLLHYNSWEVFSLPDRDQWVILLIEGLIGSVLTETLWLWGMLLTSPLIAT 370
           ++ +LLWP   +LH    E FSLP     +I+LI     + +++ LW+  ML+TSPL+ T
Sbjct: 234 FDLILLWPFLIILHLYGVERFSLPSTTAGLIVLIINASITFVSDYLWVIAMLMTSPLLVT 293

Query: 371 LGLGLIVPLSM 381
           +G+ L +PL++
Sbjct: 294 VGMSLSIPLAL 304

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

>sp|Q04083|THI74_YEAST Thiamine-repressible mitochondrial transport protein THI74 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=THI74 PE=1 SV=1

 Score = 72.4 bits (176), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 52/184 (28%), Positives = 94/184 (51%), Gaps = 11/184 (5%)

Query: 237 DKFSLSKCVTVCISVCGLILVTISDVYMEHLHIPSGSFL-----SLVSALFYSLYIVFLR 291
           + FS  K + + +S+ G+IL+ +     +   + + SFL     +L+ +L YS+Y   L+
Sbjct: 168 ETFSTKKLLGLFVSLFGIILIVMQSSKQQD-SVSASSFLVGNTLALLGSLGYSVYTTLLK 226

Query: 292 RLEHEE--KLDIVLFYGFVGLYNCLLLWPLFFLLHYNSWEVFSLPDRDQWVILLIEGLIG 349
                +  +LDI +F G+VG++  LL WP+  +L     E F LP       L++   I 
Sbjct: 227 YEISSKGLRLDIQMFLGYVGIFTFLLFWPILIILDITHMETFELPSNFHISFLVMLNCII 286

Query: 350 SVLTETLWLWGMLLTSPLIATLGLGLIVPLSMIANTSLYHVTYPRLFYVGAVPVVFAFVA 409
             +++  W   ++LTSPL+ T+ L   +PL+M A+       +   + +G   V+F FV+
Sbjct: 287 IFVSDYFWCKALILTSPLVVTVALTFTIPLAMFADFVWREAFFTPWYIIG---VIFIFVS 343

Query: 410 SILL 413
             L+
Sbjct: 344 FFLV 347

May be involved in thiaminediphosphate transport across the mitochondrial membrane.

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	470
328781726	478	PREDICTED: solute carrier family 35 memb	0.914	0.899	0.427	1e-87
383863703	478	PREDICTED: solute carrier family 35 memb	0.914	0.899	0.417	5e-87
380025091	479	PREDICTED: solute carrier family 35 memb	0.914	0.897	0.426	2e-86
345492685	478	PREDICTED: solute carrier family 35 memb	0.914	0.899	0.404	4e-86
350417359	478	PREDICTED: solute carrier family 35 memb	0.914	0.899	0.412	4e-85
340714349	478	PREDICTED: solute carrier family 35 memb	0.914	0.899	0.410	5e-85
307184256	432	Solute carrier family 35 member F5 [Camp	0.868	0.944	0.415	2e-82
307207034	479	Solute carrier family 35 member F5 [Harp	0.727	0.713	0.457	8e-82
332027367	479	Solute carrier family 35 member F5 [Acro	0.727	0.713	0.443	2e-79
282158075	463	solute carrier family 35, member F5 [Tri	0.857	0.870	0.378	2e-76

>gi|328781726|ref|XP_396204.4| PREDICTED: solute carrier family 35 member F5-like [Apis mellifera]

 Score =  330 bits (845), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 204/477 (42%), Positives = 285/477 (59%), Gaps = 47/477 (9%)

Query: 15  LNVLLSRFQRHALGCFVLILVDILWALSSEIVKKVDQHVEDE----------SYFT---- 60
           L  ++++ QR  LG  VL+LVDI+W  SSE+ K + +    E          S FT    
Sbjct: 22  LAAMMNKSQRLVLGLLVLLLVDIIWVSSSELTKYIYREAAFEKPFFSTYVKTSMFTFYLL 81

Query: 61  ---------DQTEPPGELKFPLHNLFIQVFLLVSIKKLQSASRGLHGKVLFSGRSSGTES 111
                    DQ   P    F   N+    F   +   L   +           RSSGTES
Sbjct: 82  GLCFWPPWRDQCNKPATYMFIDPNVEDDNFYSEANTSLSDPTFVPIKTSDHCDRSSGTES 141

Query: 112 ETENSMRKHVRFSKLTERPQVLGVPASFLMEAPVRHLSDKEANEALLARLSYQATLRTAD 171
           + ++S+R  VRFSKL E                VRH+S+ +A EALLARLSYQA+LR  +
Sbjct: 142 D-DSSIRS-VRFSKLAE----------------VRHMSESDATEALLARLSYQASLRAGE 183

Query: 172 FTFIQSTKYNIPQVAKVAFVFSFLRFGAEYTF--TLLGAEAGTVALIYSSSSVLTLLICA 229
               Q+ K+++ +VAK+A +F  L F A YT+  +L   EAG V ++ S+SS+ TL + A
Sbjct: 184 HARRQANKFSVQKVAKIALMFCLLWFMANYTYQISLARTEAGIVTVLTSTSSLFTLFLAA 243

Query: 230 FFPSSSSDKFSLSKCVTVCISVCGLILVTISDVYMEHLHIPSGSFLSLVSALFYSLYIVF 289
           FFPS+  DKF+LSK V V IS+ GL+LV +SD+ +E   IP+G  L+LVSA FY+ YIVF
Sbjct: 244 FFPSNGGDKFTLSKLVAVSISILGLVLVGLSDLTIETSRIPTGIILALVSAFFYAAYIVF 303

Query: 290 LRR-LEHEEKLDIVLFYGFVGLYNCLLLWPLFFLLHYNSWEVFSLPDRDQWVILLIEGLI 348
           L+R ++HE+K+DI +F+GFVGL+N  LLWP+FF+LHY  WE F  PD  QW  L+I GLI
Sbjct: 304 LKRKVDHEDKMDIPMFFGFVGLFNLTLLWPVFFILHYGHWEEFEWPDTHQWTFLIINGLI 363

Query: 349 GSVLTETLWLWGMLLTSPLIATLGLGLIVPLSMIANTSLYHVTYPRLFYVGAVPVVFAFV 408
           G+VL+E LWLWG  LTS LIATL + L++P+SMIA+  L  V YP +FY+G +P++ AF+
Sbjct: 364 GTVLSEVLWLWGCFLTSSLIATLAVSLLMPMSMIADVLLKKVEYPCIFYLGTIPMLLAFL 423

Query: 409 ASILLAQMASRDPVLEILLSCVTSLSGPSLGRTSKKISDADSEQRESLININMCDQE 465
              LL+   + DPV++++      +   +    S +I D ++EQ ESLI IN  + E
Sbjct: 424 TVSLLSYYDNWDPVMDLIKRIYIWICRKN---RSIRIPDLEAEQTESLIGINSGEHE 477

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383863703|ref|XP_003707319.1| PREDICTED: solute carrier family 35 member F5-like [Megachile rotundata]

 Score =  328 bits (840), Expect = 5e-87,   Method: Compositional matrix adjust.
 Identities = 199/477 (41%), Positives = 285/477 (59%), Gaps = 47/477 (9%)

Query: 15  LNVLLSRFQRHALGCFVLILVDILWALSSEIVKKVDQHVE-DESYFT------------- 60
           L  ++++ QR  LG  VL+LVDI+W  SSE+ K + +    ++ +FT             
Sbjct: 22  LAAMMNKSQRLVLGLLVLLLVDIIWVSSSELTKYIYREAAFEKPFFTTYVKTSMFTLYLL 81

Query: 61  ---------DQTEPPGELKFPLHNLFIQVFLLVSIKKLQSASRGLHGKVLFSGRSSGTES 111
                    DQ   P    F   N+    F       L   +           RSSGTES
Sbjct: 82  GLCFWPPWRDQCNTPATYMFIDPNVEDDNFYSEGNTSLSDPTFVPIKTPDHCDRSSGTES 141

Query: 112 ETENSMRKHVRFSKLTERPQVLGVPASFLMEAPVRHLSDKEANEALLARLSYQATLRTAD 171
           + ++S+R  VRFSKL E                VRH+S+ +A EALLARLSYQA+LR  +
Sbjct: 142 D-DSSIRS-VRFSKLAE----------------VRHMSETDATEALLARLSYQASLRAGE 183

Query: 172 FTFIQSTKYNIPQVAKVAFVFSFLRFGAEYTF--TLLGAEAGTVALIYSSSSVLTLLICA 229
               Q+ K+++ +VAK+A +F  L F A YT+  +L+  EAG V ++ S+SS+ TL + A
Sbjct: 184 HARRQANKFSVQKVAKIALMFCLLWFMANYTYQISLVKTEAGVVTVLSSTSSLFTLFLAA 243

Query: 230 FFPSSSSDKFSLSKCVTVCISVCGLILVTISDVYMEHLHIPSGSFLSLVSALFYSLYIVF 289
           FFPS+  DKF+LSK V V +S+ GL+LV +SD+ +E   +P+G  L+LVSA FY+ YIVF
Sbjct: 244 FFPSNGGDKFTLSKLVAVSVSILGLVLVGLSDLTIETSRVPTGIILALVSAFFYAAYIVF 303

Query: 290 LRR-LEHEEKLDIVLFYGFVGLYNCLLLWPLFFLLHYNSWEVFSLPDRDQWVILLIEGLI 348
           L+R ++HE+K+DI + +GFVGL+N  LLWPLFF+LHY  WE F  PD  QW  ++I GL+
Sbjct: 304 LKRKVDHEDKMDIPMLFGFVGLFNLTLLWPLFFILHYGHWEEFEWPDSHQWTFIVINGLV 363

Query: 349 GSVLTETLWLWGMLLTSPLIATLGLGLIVPLSMIANTSLYHVTYPRLFYVGAVPVVFAFV 408
           G+VL+E LWLWG  LTS LIATL + LI+P+SMIA+  L +V YP +FY+G +P++ AF 
Sbjct: 364 GTVLSEVLWLWGCFLTSSLIATLAVSLIMPMSMIADVLLKNVEYPCIFYLGTIPMLLAFF 423

Query: 409 ASILLAQMASRDPVLEILLSCVTSLSGPSLGRTSKKISDADSEQRESLININMCDQE 465
              LL+   + DPV++++      +   +    S +I D ++EQ ESLI IN  + E
Sbjct: 424 TVSLLSYYDNWDPVMDLIKKIYIWICKKN---RSIRIPDLEAEQTESLIGINSGEHE 477

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380025091|ref|XP_003696313.1| PREDICTED: solute carrier family 35 member F5-like [Apis florea]

 Score =  325 bits (834), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 204/478 (42%), Positives = 285/478 (59%), Gaps = 48/478 (10%)

Query: 15  LNVLLSRFQRHALGCFVLILVDILWALSSEIVKKVDQHVEDE----------SYFT---- 60
           L  ++++ QR  LG  VL+LVDI+W  SSE+ K + +    E          S FT    
Sbjct: 22  LAAMMNKSQRLVLGLLVLLLVDIIWVSSSELTKYIYREAAFEKPFFSTYVKTSMFTFYLL 81

Query: 61  ---------DQTEPPGELKFPLHNLFIQVFLLVSIKKLQSASRGLHGKVLFSGRSSGTES 111
                    DQ   P    F   N+    F   +   L   +           RSSGTES
Sbjct: 82  GLCFWPPWRDQCNKPATYMFIDPNVEDDNFYSEANTSLSDPTFVPIKTSDHCDRSSGTES 141

Query: 112 ETENSMRKHVRFSKLTERPQVLGVPASFLMEAPVRHLSDKEANEALLARLSYQATLRTAD 171
           + ++S+R  VRFSKL E                VRH+S+ +A EALLARLSYQA+LR  +
Sbjct: 142 D-DSSIRS-VRFSKLAE----------------VRHMSESDATEALLARLSYQASLRAGE 183

Query: 172 FTFIQSTKYNIPQVAKVAFVFSFLRFGAEYTF--TLLGAEAGTVALIYSSSSVLTLLICA 229
               Q+ K+++ +VAK+A +F  L F A YT+  +L   EAG V ++ S+SS+ TL + A
Sbjct: 184 HARRQANKFSVQKVAKIALMFCLLWFMANYTYQISLARTEAGIVTVLTSTSSLFTLFLAA 243

Query: 230 FFPSSSSDKFSLSKCVTVCISVCGLILVTISDVYMEHLHIPSGSFLSLVSALFYSLYIVF 289
           FFPS+  DKF+LSK V V IS+ GL+LV +SD+ +E   IP+G  L+LVSA FY+ YIVF
Sbjct: 244 FFPSNGGDKFTLSKLVAVSISILGLVLVGLSDLTIETSRIPTGIILALVSAFFYAAYIVF 303

Query: 290 LRR-LEHEEKLDIVLFYGFVGLYNCLLLWPLFFLLHYNSWEVFSLPDRDQWVILLIEGLI 348
           L+R ++HE+K+DI +F+GFVGL+N  LLWP+FF+LHY  WE F  PD  QW  L+I GLI
Sbjct: 304 LKRKVDHEDKMDIPMFFGFVGLFNLTLLWPVFFILHYGHWEEFEWPDTHQWTFLIINGLI 363

Query: 349 GSVLTETLWLW-GMLLTSPLIATLGLGLIVPLSMIANTSLYHVTYPRLFYVGAVPVVFAF 407
           G+VL+E LWLW G  LTS LIATL + L++P+SMIA+  L  V YP +FY+G +P++ AF
Sbjct: 364 GTVLSEVLWLWYGFFLTSSLIATLAVSLLMPMSMIADVLLKKVEYPCIFYLGTIPMLLAF 423

Query: 408 VASILLAQMASRDPVLEILLSCVTSLSGPSLGRTSKKISDADSEQRESLININMCDQE 465
           +   LL+   + DPV++++      +   +    S +I D ++EQ ESLI IN  + E
Sbjct: 424 LTVSLLSYYDNWDPVMDLIKRIYIWICRKN---RSIRIPDLEAEQTESLIGINSGEHE 478

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|345492685|ref|XP_001601634.2| PREDICTED: solute carrier family 35 member F5-like [Nasonia vitripennis]

 Score =  325 bits (832), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 193/477 (40%), Positives = 277/477 (58%), Gaps = 47/477 (9%)

Query: 15  LNVLLSRFQRHALGCFVLILVDILWALSSEIVKKVDQH-VEDESYFT------------- 60
           L  ++++ QR  LG  +L+LVDI+W  S+E+ K + Q    D+ +F+             
Sbjct: 22  LAAMMNKSQRLVLGISILLLVDIIWVSSNELTKYIYQEDTFDKPFFSTYIKTSMFTLYLL 81

Query: 61  ---------DQTEPPGELKFPLHNLFIQVFLLVSIKKLQSASRGLHGKVLFSGRSSGTES 111
                    DQ   P    F   N+    F       L   +           RSSGTES
Sbjct: 82  GLCFWPPWRDQCNKPATYMFIDPNIEDDHFYSEGTTSLSDPTFVPIKTPEQCDRSSGTES 141

Query: 112 ETENSMRKHVRFSKLTERPQVLGVPASFLMEAPVRHLSDKEANEALLARLSYQATLRTAD 171
           +  +S  + VRFSKL E                VRH+S+ +A EAL+ARLSYQA++R  +
Sbjct: 142 D--DSSVRSVRFSKLAE----------------VRHMSENDATEALIARLSYQASVRAGE 183

Query: 172 FTFIQSTKYNIPQVAKVAFVFSFLRFGAEYT--FTLLGAEAGTVALIYSSSSVLTLLICA 229
               Q+ K+++ +VAK+A +F FL F A YT   +L   EA  V ++ S+S + TL + A
Sbjct: 184 HARRQANKFSVQKVAKIALMFCFLWFIANYTHQMSLAVTEARIVTVLSSTSCLFTLFLAA 243

Query: 230 FFPSSSSDKFSLSKCVTVCISVCGLILVTISDVYMEHLHIPSGSFLSLVSALFYSLYIVF 289
            +PS++ DKF+LSK V + IS+ GL+LV +SD+ +E   +P+G  L+LVSA FY+ YIVF
Sbjct: 244 VYPSNNGDKFTLSKLVAITISIFGLVLVGLSDLSIEASRLPTGIILALVSAFFYATYIVF 303

Query: 290 LRR-LEHEEKLDIVLFYGFVGLYNCLLLWPLFFLLHYNSWEVFSLPDRDQWVILLIEGLI 348
           L++ ++HE+K+DI +F+GFVGL+N  LLWPLFF+LHY  WE F  P+  QW  L+I GLI
Sbjct: 304 LKKKVDHEDKMDIPMFFGFVGLFNLTLLWPLFFILHYGQWEEFEWPNPHQWTFLIINGLI 363

Query: 349 GSVLTETLWLWGMLLTSPLIATLGLGLIVPLSMIANTSLYHVTYPRLFYVGAVPVVFAFV 408
           G+VL+E LWLWG  LTS LIATL + L +P+SMI +  L  V YP +FY+G +P++ AF 
Sbjct: 364 GTVLSEVLWLWGCFLTSSLIATLAISLTMPISMIVDVLLKKVEYPCIFYLGTIPMILAFF 423

Query: 409 ASILLAQMASRDPVLEILLSCVTSLSGPSLGRTSKKISDADSEQRESLININMCDQE 465
              LL+   + DPVL+++      +   S    S +I D + EQ ESLI IN  + E
Sbjct: 424 TVSLLSHFDNWDPVLDLVKKLYKWICRRS---RSIRIPDLEVEQTESLIGINSGEHE 477

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350417359|ref|XP_003491384.1| PREDICTED: solute carrier family 35 member F5-like [Bombus impatiens]

 Score =  321 bits (823), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 197/477 (41%), Positives = 284/477 (59%), Gaps = 47/477 (9%)

Query: 15  LNVLLSRFQRHALGCFVLILVDILWALSSEIVKKVDQHVE-DESYFT------------- 60
           L  ++++ QR  LG  VL+LVDI+W  S+E+ K + +    ++ +FT             
Sbjct: 22  LAAMMNKSQRLVLGLLVLLLVDIIWVSSTELTKYIYREAAFEKPFFTTYIKTSMFTFYLL 81

Query: 61  ---------DQTEPPGELKFPLHNLFIQVFLLVSIKKLQSASRGLHGKVLFSGRSSGTES 111
                    DQ   P    F   N+    F   +   L   +           RSSGTES
Sbjct: 82  GLCFWPPWRDQCNKPATYMFIDPNVEDDNFYSEANTSLSDPTFVPIKTPDHCDRSSGTES 141

Query: 112 ETENSMRKHVRFSKLTERPQVLGVPASFLMEAPVRHLSDKEANEALLARLSYQATLRTAD 171
           + ++S+R  VRFSKL E                VRH+S+ +A EALLARLSYQA+LR  +
Sbjct: 142 D-DSSIRS-VRFSKLAE----------------VRHMSESDATEALLARLSYQASLRAGE 183

Query: 172 FTFIQSTKYNIPQVAKVAFVFSFLRFGAEYTF--TLLGAEAGTVALIYSSSSVLTLLICA 229
               Q+ K+++ +VAK+A +F  L F A YT+  +L+  E+G V ++ S SS+ TL + A
Sbjct: 184 HARRQANKFSVQKVAKIALMFCLLWFMANYTYQISLVKTESGVVTVLTSISSLFTLFLAA 243

Query: 230 FFPSSSSDKFSLSKCVTVCISVCGLILVTISDVYMEHLHIPSGSFLSLVSALFYSLYIVF 289
           FFPS+  DKF+LSK V V IS+ GL+LV +SD+ +E   IP+   L+LVSA FY+ YIVF
Sbjct: 244 FFPSNGGDKFTLSKLVAVSISILGLVLVGLSDLTVETSRIPTAIILALVSAFFYAAYIVF 303

Query: 290 LRR-LEHEEKLDIVLFYGFVGLYNCLLLWPLFFLLHYNSWEVFSLPDRDQWVILLIEGLI 348
           L+R ++HE+K+DI +F+GFVGL+N  LLWP+FF+LHY  WE F  PD  QW  L+I GLI
Sbjct: 304 LKRKVDHEDKMDIPMFFGFVGLFNLTLLWPVFFILHYGHWEEFEWPDTHQWTFLIINGLI 363

Query: 349 GSVLTETLWLWGMLLTSPLIATLGLGLIVPLSMIANTSLYHVTYPRLFYVGAVPVVFAFV 408
           G+VL+E LWLWG  LTS LIATL + L++P+SMIA+  L  V YP +FY+G +P++ AF+
Sbjct: 364 GTVLSEVLWLWGCFLTSSLIATLAISLLMPMSMIADVLLKKVEYPCIFYLGTIPMLLAFL 423

Query: 409 ASILLAQMASRDPVLEILLSCVTSLSGPSLGRTSKKISDADSEQRESLININMCDQE 465
               L+   + DPV++++      +   +    S +I D ++EQ ESLI I+  + E
Sbjct: 424 TVSFLSYYDNWDPVMDLIKRIYIWICRKN---RSIRIPDLEAEQTESLIGISSGEHE 477

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340714349|ref|XP_003395692.1| PREDICTED: solute carrier family 35 member F5-like isoform 1 [Bombus terrestris] gi|340714351|ref|XP_003395693.1| PREDICTED: solute carrier family 35 member F5-like isoform 2 [Bombus terrestris]

 Score =  321 bits (823), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 196/477 (41%), Positives = 283/477 (59%), Gaps = 47/477 (9%)

Query: 15  LNVLLSRFQRHALGCFVLILVDILWALSSEIVKKVDQHVE-DESYFT------------- 60
           L  ++++ QR  LG  VL+LVDI+W  S+E+ K + +    ++ +FT             
Sbjct: 22  LAAMMNKSQRLVLGLLVLLLVDIIWVSSTELTKYIYREAAFEKPFFTTYIKTSMFTFYLL 81

Query: 61  ---------DQTEPPGELKFPLHNLFIQVFLLVSIKKLQSASRGLHGKVLFSGRSSGTES 111
                    DQ   P    F   N+    F   +   L   +           RSSGTES
Sbjct: 82  GLCFWPPWRDQCNKPATYMFIDPNVEDDNFYSEANTSLSDPTFVPIKTPDHCDRSSGTES 141

Query: 112 ETENSMRKHVRFSKLTERPQVLGVPASFLMEAPVRHLSDKEANEALLARLSYQATLRTAD 171
           +  +S  + VRFSKL E                VRH+S+ +A EALLARLSYQA+LR  +
Sbjct: 142 D--DSSIRSVRFSKLAE----------------VRHMSESDATEALLARLSYQASLRAGE 183

Query: 172 FTFIQSTKYNIPQVAKVAFVFSFLRFGAEYTF--TLLGAEAGTVALIYSSSSVLTLLICA 229
               Q+ K+++ +VAK+A +F  L F A YT+  +L+  E+G V ++ S SS+ TL + A
Sbjct: 184 HARRQANKFSVQKVAKIALMFCLLWFMANYTYQISLVKTESGLVTVLTSISSLFTLFLAA 243

Query: 230 FFPSSSSDKFSLSKCVTVCISVCGLILVTISDVYMEHLHIPSGSFLSLVSALFYSLYIVF 289
           FFPS+  DKF+LSK V V IS+ GL+LV +SD+ +E   IP+   L+LVSA FY+ YIVF
Sbjct: 244 FFPSNGGDKFTLSKLVAVSISILGLVLVGLSDLTVETNRIPTAIILALVSAFFYAAYIVF 303

Query: 290 LRR-LEHEEKLDIVLFYGFVGLYNCLLLWPLFFLLHYNSWEVFSLPDRDQWVILLIEGLI 348
           L+R ++HE+K+DI +F+GFVGL+N  LLWP+FF+LHY  WE F  PD +QW  L+I GLI
Sbjct: 304 LKRKVDHEDKMDIPMFFGFVGLFNLTLLWPVFFILHYGHWEEFEWPDTNQWTYLIINGLI 363

Query: 349 GSVLTETLWLWGMLLTSPLIATLGLGLIVPLSMIANTSLYHVTYPRLFYVGAVPVVFAFV 408
           G+VL+E LWLWG  LTS LIATL + L++P+SMIA+  L  V YP +FY+G +P++ AF+
Sbjct: 364 GTVLSEVLWLWGCFLTSSLIATLAVSLLMPMSMIADVLLKKVEYPCIFYLGTIPMLLAFL 423

Query: 409 ASILLAQMASRDPVLEILLSCVTSLSGPSLGRTSKKISDADSEQRESLININMCDQE 465
               L+   + DPV++++      +   +    S +I D ++EQ ESLI I+  + E
Sbjct: 424 TVSFLSYYDNWDPVMDLIKRIYIWICRKN---RSIRIPDIEAEQTESLIGISSGEHE 477

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307184256|gb|EFN70729.1| Solute carrier family 35 member F5 [Camponotus floridanus]

 Score =  313 bits (801), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 189/455 (41%), Positives = 273/455 (60%), Gaps = 47/455 (10%)

Query: 15  LNVLLSRFQRHALGCFVLILVDILWALSSEIVKKVDQHVEDESYFTDQTEPPGELKFPLH 74
           L  ++++ QR  LG  +L+LVDI+W  SSE+ K +D ++ED++++ +      +  F   
Sbjct: 22  LAAMMNKSQRLILGLLILLLVDIIWVSSSELTKFIDPNIEDDNFYAEANTSLSDPTF--- 78

Query: 75  NLFIQVFLLVSIKKLQSASRGLHGKVLFSGRSSGTESETENSMRKHVRFSKLTERPQVLG 134
                    V IK                 RSSGTES+ ++S+R  VRFSKL E      
Sbjct: 79  ---------VPIKTPDHCD-----------RSSGTESD-DSSIRS-VRFSKLAE------ 110

Query: 135 VPASFLMEAPVRHLSDKEANEALLARLSYQATLRTADFTFIQSTKYNIPQVAKVAFVFSF 194
                     VRH+S+ +A EALLARLSYQA++R  +    Q+ K+++ +VAK+A +F  
Sbjct: 111 ----------VRHMSESDATEALLARLSYQASVRAGEHARRQANKFSVQKVAKIALMFCL 160

Query: 195 LRFGAEYTF--TLLGAEAGTVALIYSSSSVLTLLICAFFPSSSSDKFSLSKCVTVCISVC 252
             F A YT+  +L   E   V ++ S+SS+ TL + AFFPS+  DK +LSK   V +S  
Sbjct: 161 FWFIANYTYQISLEQIEDKIVIVLASTSSLFTLFLAAFFPSNGGDKLTLSKLAAVFVSFF 220

Query: 253 GLILVTISDVYMEHLHIPSGSFLSLVSALFYSLYIVFL-RRLEHEEKLDIVLFYGFVGLY 311
           GLILV ISD+ +E+     G  L+LVSA FY+ YIVFL R+++HEEK+DI +F+GFVG++
Sbjct: 221 GLILVGISDLTVENNSKSMGIILALVSAFFYAAYIVFLKRKVDHEEKMDIPMFFGFVGIF 280

Query: 312 NCLLLWPLFFLLHYNSWEVFSLPDRDQWVILLIEGLIGSVLTETLWLWGMLLTSPLIATL 371
           N  LLWPLFF+LHY  WE F  P+  QW  L+I GLIG+VL E LWLWG  LTS L+AT+
Sbjct: 281 NLTLLWPLFFILHYGHWEEFEWPNSHQWTFLIINGLIGTVLNEVLWLWGCFLTSSLVATM 340

Query: 372 GLGLIVPLSMIANTSLYHVTYPRLFYVGAVPVVFAFVASILLAQMASRDPVLEILLSCVT 431
            + L +P+SM+A+  L  V YP +FY G++P+  AF+A  L +   + DPV+ ++     
Sbjct: 341 AVSLTMPMSMVADVLLKKVEYPYIFYFGSIPMFLAFLAVSLFSYYDNWDPVMNLMKRFFI 400

Query: 432 SLSGPSLGRTSKKISDADSEQRESLININMCDQEV 466
            +   +    S +I D ++EQ ESLI I+  D E 
Sbjct: 401 WICRKN---RSTRIPDLEAEQTESLIGIDSGDHEA 432

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307207034|gb|EFN84857.1| Solute carrier family 35 member F5 [Harpegnathos saltator]

 Score =  310 bits (795), Expect = 8e-82,   Method: Compositional matrix adjust.
 Identities = 167/365 (45%), Positives = 240/365 (65%), Gaps = 23/365 (6%)

Query: 105 RSSGTESETENSMRKHVRFSKLTERPQVLGVPASFLMEAPVRHLSDKEANEALLARLSYQ 164
           RSSGTES+ ++S+R  VRFSKL E                VRH+S+ +A EALLARLSYQ
Sbjct: 135 RSSGTESD-DSSIRS-VRFSKLAE----------------VRHMSESDATEALLARLSYQ 176

Query: 165 ATLRTADFTFIQSTKYNIPQVAKVAFVFSFLRFGAEYTF--TLLGAEAGTVALIYSSSSV 222
           A++R  +    Q+ K+++ +VAK+A +F    F A YT+  +L   EA  V ++ S+SS+
Sbjct: 177 ASVRAGEHARRQANKFSVQKVAKIALMFCLFWFMANYTYQISLEQTEARIVTILSSTSSL 236

Query: 223 LTLLICAFFPSSSSDKFSLSKCVTVCISVCGLILVTISDVYMEHLHIPSGSFLSLVSALF 282
            TL + AFFPS+  DKF+LSK   V IS+ GL+LV +SD+ ++   + +G  L+LVSA F
Sbjct: 237 FTLFLAAFFPSNGGDKFTLSKLAAVVISISGLVLVGLSDLNVKSNSMSTGIILALVSAFF 296

Query: 283 YSLYIVFLRR-LEHEEKLDIVLFYGFVGLYNCLLLWPLFFLLHYNSWEVFSLPDRDQWVI 341
           Y+ YIVFL+R ++HE+K+DI +F+GFVG++N  LLWPLFF+LHY  WE F  P+  QW  
Sbjct: 297 YAAYIVFLKRKVDHEDKMDIPMFFGFVGIFNLTLLWPLFFILHYGHWEEFEWPNSHQWTF 356

Query: 342 LLIEGLIGSVLTETLWLWGMLLTSPLIATLGLGLIVPLSMIANTSLYHVTYPRLFYVGAV 401
           L+I GLIG+VL E LWLWG  LTS L+ATL + L +P+SM+A+  L  V YP +FY+G++
Sbjct: 357 LIINGLIGTVLGEVLWLWGCFLTSSLVATLAVSLTMPMSMVADVLLKKVEYPCIFYLGSI 416

Query: 402 PVVFAFVASILLAQMASRDPVLEILLSCVTSLSGPSLGRTSKKISDADSEQRESLININM 461
           P++ AF+   LL+   + DPV++++      +        S +I D ++EQ ESLI I+ 
Sbjct: 417 PMLLAFLTVSLLSYYDNWDPVMDLMKRFYIWIC--RRNNRSTRIPDLEAEQTESLIGIDS 474

Query: 462 CDQEV 466
            D E 
Sbjct: 475 GDHEA 479

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332027367|gb|EGI67450.1| Solute carrier family 35 member F5 [Acromyrmex echinatior]

 Score =  303 bits (775), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 162/365 (44%), Positives = 238/365 (65%), Gaps = 23/365 (6%)

Query: 105 RSSGTESETENSMRKHVRFSKLTERPQVLGVPASFLMEAPVRHLSDKEANEALLARLSYQ 164
           RSSGTES+  +S  + VRFSKL E                VRH+S+ +A EALLARLSYQ
Sbjct: 135 RSSGTESD--DSSIRSVRFSKLAE----------------VRHMSESDATEALLARLSYQ 176

Query: 165 ATLRTADFTFIQSTKYNIPQVAKVAFVFSFLRFGAEYTF--TLLGAEAGTVALIYSSSSV 222
           A++R  +    Q+ K+++ +VAK+A +F    F A YT+  +L    A  V ++ S+SS+
Sbjct: 177 ASVRAGEQARRQANKFSVQKVAKIALMFCLFWFMANYTYQMSLEQTPARIVTVLSSTSSL 236

Query: 223 LTLLICAFFPSSSSDKFSLSKCVTVCISVCGLILVTISDVYMEHLHIPSGSFLSLVSALF 282
            TL + A FP +  DKF+LSK   V +S+ GL+LV ISD+ +E  ++ +G  L+LVSA F
Sbjct: 237 FTLFLAASFPCNGGDKFTLSKLAAVIVSIFGLVLVGISDLTIESNNMSTGIILALVSAFF 296

Query: 283 YSLYIVFLRR-LEHEEKLDIVLFYGFVGLYNCLLLWPLFFLLHYNSWEVFSLPDRDQWVI 341
           Y+ YIVFL+R ++HE+K+DI +F+GFVG++N  LLWPLFF+LHY  WE F  P+  QW  
Sbjct: 297 YAAYIVFLKRKVDHEDKMDIPMFFGFVGIFNLTLLWPLFFILHYGHWEEFEWPNSHQWTF 356

Query: 342 LLIEGLIGSVLTETLWLWGMLLTSPLIATLGLGLIVPLSMIANTSLYHVTYPRLFYVGAV 401
           L+I GLIG+VL++ LWLWG  LTS L+AT+ + L +P+SM+A+  L  V YP +FY+G++
Sbjct: 357 LIINGLIGTVLSQVLWLWGCFLTSSLVATMAVSLTMPMSMVADVLLKKVEYPCIFYLGSI 416

Query: 402 PVVFAFVASILLAQMASRDPVLEILLSCVTSLSGPSLGRTSKKISDADSEQRESLININM 461
           P++ AF+   LL+   + DPV++++      +   +    S +I D ++EQ ESLI I+ 
Sbjct: 417 PMLLAFLTVSLLSYYDNWDPVMDLIKRFFIWICRKN--NRSTRIPDLEAEQTESLIGIDS 474

Query: 462 CDQEV 466
            D E 
Sbjct: 475 GDHEA 479

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|282158075|ref|NP_001164081.1| solute carrier family 35, member F5 [Tribolium castaneum] gi|270010901|gb|EFA07349.1| hypothetical protein TcasGA2_TC015947 [Tribolium castaneum]

 Score =  293 bits (749), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 188/497 (37%), Positives = 275/497 (55%), Gaps = 94/497 (18%)

Query: 19  LSRFQRHALGCFVLILVDILWALSSEIVK------------------------------- 47
           L++ QR  LG FVLILVD++W  SSE+ K                               
Sbjct: 10  LTKTQRLILGSFVLILVDVIWVASSELTKFIYSNETFEKPFFCTYVKTSMFAIYLLGFLF 69

Query: 48  ---------------KVDQHVEDESYFTDQTEPPGELKFPLHNLFIQVFLLVSIKKLQSA 92
                           VD   EDE+Y+ D       L  P       V++ V   +L   
Sbjct: 70  WQPWKDNCSRPANYIHVDTEQEDENYYNDTNTTNSRLSNP-------VYVPVKTPELD-- 120

Query: 93  SRGLHGKVLFSGRSSGTESETENSMRKHVRFSKLTERPQVLGVPASFLMEAPVRHLSDKE 152
                       R+SGTES+  +S  + VRF+KL E                VRH+S+ +
Sbjct: 121 ------------RNSGTESD--DSSVRSVRFNKLAE----------------VRHMSETD 150

Query: 153 ANEALLARLSYQATLRTADFTFIQSTKYNIPQVAKVAFVFSFLRFGAEYTF--TLLGAEA 210
           A EALLARLSYQATLR  +     + K  + +VAK++ +F  L F A Y++   L   EA
Sbjct: 151 ATEALLARLSYQATLRAGEIAKRAAIKLPVLRVAKISLIFCLLWFLANYSYQVALAQTEA 210

Query: 211 GTVALIYSSSSVLTLLICAFFPSSSSDKFSLSKCVTVCISVCGLILVTISDVYMEHLHIP 270
             V ++ S+SS  TL++ A FPS+ +DKF+LSK + V +S+ G  LV+ SD+ +E   +P
Sbjct: 211 AMVNVLSSTSSFFTLVLAAIFPSNQNDKFTLSKFLAVLLSLLGTTLVSFSDISLES-SVP 269

Query: 271 SGSFLSLVSALFYSLYIVFLRR-LEHEEKLDIVLFYGFVGLYNCLLLWPLFFLLHYNSWE 329
            G+FLSL+SA FY+ Y+VFL+R ++HE+K+DI LF+GFVG +N +LLWP FF LH++  E
Sbjct: 270 LGAFLSLLSAFFYATYLVFLKRKVDHEDKIDIPLFFGFVGFFNLILLWPCFFFLHFSGLE 329

Query: 330 VFSLPDRDQWVILLIEGLIGSVLTETLWLWGMLLTSPLIATLGLGLIVPLSMIANTSLYH 389
           VF  P R Q ++LL+ G++G+V++E LWLWG  LTS L+AT+ + L +P++M+ +  L  
Sbjct: 330 VFEWPSRQQVLLLLLNGVLGTVISEALWLWGCFLTSSLMATMSMSLTIPMTMLMDVFLKK 389

Query: 390 VTYPRLFYVGAVPVVFAFVASILLAQMASRDPVLEILLSCVTSLSGPSLGRTS-KKISDA 448
           + YP LFY G++P+V AF A  LL+   + DPVL+++     S+      RT   + ++ 
Sbjct: 390 IVYPSLFYTGSIPMVVAFFAVTLLSHYDNWDPVLDVIRCAYLSIC----RRTRFMRFAEM 445

Query: 449 DSEQRESLININMCDQE 465
            SEQ E+LI IN  + E
Sbjct: 446 PSEQTEALIGINSNEHE 462

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	470
FB|FBgn0034032	449	CG8195 [Drosophila melanogaste	0.648	0.679	0.340	1.4e-46
RGD|1308125	524	Slc35f5 "solute carrier family	0.912	0.818	0.308	3.2e-42
UNIPROTKB|A6QL92	524	SLC35F5 "Solute carrier family	0.906	0.812	0.301	6.6e-42
UNIPROTKB|F1RY25	524	SLC35F5 "Uncharacterized prote	0.906	0.812	0.301	8.4e-42
MGI|MGI:1921400	524	Slc35f5 "solute carrier family	0.912	0.818	0.305	1.1e-41
UNIPROTKB|E2RAG9	524	SLC35F5 "Uncharacterized prote	0.906	0.812	0.301	1.4e-41
UNIPROTKB|F1NEN4	482	SLC35F5 "Uncharacterized prote	0.917	0.894	0.300	4.6e-41
UNIPROTKB|B8ZZY4	517	SLC35F5 "Solute carrier family	0.904	0.822	0.297	1.6e-40
UNIPROTKB|Q8WV83	523	SLC35F5 "Solute carrier family	0.904	0.812	0.297	1.6e-40
UNIPROTKB|H7C0S5	242	SLC35F5 "Solute carrier family	0.470	0.913	0.310	1e-24

FB|FBgn0034032 CG8195 [Drosophila melanogaster (taxid:7227)]

 Score = 425 (154.7 bits), Expect = 1.4e-46, Sum P(2) = 1.4e-46
 Identities = 111/326 (34%), Positives = 169/326 (51%)

Query:   139 FLMEAPVRHLSDKEANEALLARLSYQATLRTADFTFIQSTKYNIPQVAKVAFVFSFLRFG 198
             F   A VR +S  EA +AL+ARLSY A+LR       Q T +   + AK A +F  L F 
Sbjct:   136 FSKMAEVREMSAHEATDALMARLSYAASLRIRR----QKTHH---KTAKTALLFCLLWFA 188

Query:   199 AEYTFTLLGA--EAGTVALIYSSSSVLTLLICAXXXXXXXXXXXXXKCVTVCISVCGLIL 256
             A Y F L     EA  + L+ S+SS   + + A             K + V +++ G++ 
Sbjct:   189 ANYFFQLALEMDEAAMITLVSSTSSFFIICLAAVFPSATGDKLTITKVIAVAMNIGGVVA 248

Query:   257 VTISDVYMEHLHIPSGSFLSLVSALFYSLYIVFLRRL-EHEEKLDIVLFYGFVGLYNCXX 315
             +T++D++     +  G  L+L SA FY+ Y+VF++R  + EEK+DI LF+GFVGL+N   
Sbjct:   249 ITMNDLH--DTKMTRGVLLALFSAFFYAAYLVFVKRKSDTEEKVDIPLFFGFVGLWNMLL 306

Query:   316 XXXXXXXXHYNSWEVFSLPDRDQWVILLIEGLIGSVLTETLWLWGMLLTSPLIATLGLGL 375
                     H+   E F LP + Q+ +L + GL+G+VL+E LWLWG  LTS LI TL + L
Sbjct:   307 LWPIFFILHFTKIETFELPSQGQFALLFLNGLVGTVLSEALWLWGCFLTSSLIGTLAMSL 366

Query:   376 IVPLSMIANTSLYHVTYPRLXXXXXXXXXXXXXXSILLAQMASRDPVLE---ILLSCVTS 432
              +PL+++ +  L +  Y  +                LL +    DP+++   I+   V  
Sbjct:   367 QIPLAILFDVLLKNKPYSPMFYMGSIPIFVALVFVSLLMRNDDSDPLMKLFRIVYRKVCR 426

Query:   433 LSGPSLGRTSKKISDADSEQRESLIN 458
                PS+ R +      D EQ+ESLI+
Sbjct:   427 CHKPSIVRVN------DDEQQESLIS 446

GO:0016020 "membrane" evidence=IEA

RGD|1308125 Slc35f5 "solute carrier family 35, member F5" [Rattus norvegicus (taxid:10116)]

 Score = 447 (162.4 bits), Expect = 3.2e-42, P = 3.2e-42
 Identities = 146/474 (30%), Positives = 219/474 (46%)

Query:    20 SRFQRHALGCFVLILVDILWALSSEIVKKVDQHVEDESYFTDQTEPPGELKFPLHNLFIQ 79
             S+ +R ALG  +L+LVD++W  SSE+           SY   Q   P    F   ++F+ 
Sbjct:    64 SQRRRMALGIVILLLVDVIWVASSELT----------SYVFTQYNKPFFSTFAKTSMFVL 113

Query:    80 VFLLVSIKK--LQSASRGLHGK--VLFXXXXXXXXX-XXXXXMRKH--------VRFSKL 126
               L   I K   Q  +RG  GK    F               M           V+F  L
Sbjct:   114 YLLGFIIWKPWRQQCTRGFRGKPAAFFADAEGYFAACTTDSSMSSSLSEPLYVPVKFHDL 173

Query:   127 -----------TERPQVLG-VPASFLMEAPVRHLSDKEANEALLARLSYQATLRTADFTF 174
                        TE+P     V  S +ME  +R L    A EA L+R+SY  T++  +   
Sbjct:   174 PSEKLESTNIGTEKPPKKSRVRFSNIME--IRQLPSSHALEAKLSRMSYP-TVKDQESIL 230

Query:   175 IQSTKYNIPQVAKVAFVFSFLRFGAEYTF--TLLGAEAGTVALIYSSSSVLTLLICAXXX 232
                 K    QVAK++F F F+ F A  ++   L   +   V ++ S+S + TL++ A   
Sbjct:   231 KTVGKLTATQVAKISFFFCFVWFLANLSYQEALSDTQVAIVNILSSTSGLFTLILAAVFP 290

Query:   233 XXXXXXXXXXKCVTVCISVCGLILVTISDVYMEHLHIPSGSFLSLVSALFYSLYIVFLRR 292
                       K + V +S+ G++LV +S           GS  SL  A+FY++YIV ++R
Sbjct:   291 SNSGDRFTLSKLLAVILSIGGVVLVNLSGSEKSAGRDTIGSIWSLAGAMFYAVYIVMIKR 350

Query:   293 -LEHEEKLDIVLFYGFVGLYNCXXXXXXXXXXHYNSWEVFSLPDRDQWVILLIEGLIGSV 351
              ++ E+KLDI +F+GFVGL+N           HY  +E F  P++   + ++I GLIG+V
Sbjct:   351 KVDREDKLDIPMFFGFVGLFNLLLLWPGFFLLHYTGFEDFEFPNKVVLLCIIINGLIGTV 410

Query:   352 LTETLWLWGMLLTSPLIATLGLGLIVPLSMIANTSLYHVTYPRLXXXXXXXXXXXXXXSI 411
             L+E LWLWG  LTS LI TL L L +PLS+IA+  +  V +  L                
Sbjct:   411 LSEFLWLWGCFLTSSLIGTLALSLTIPLSIIADMCMQKVQFSWLFFAGAIPVFFSFFIVT 470

Query:   412 LLAQMASRDPVLEILLSCVTSLSGPSLGRTSKKISDADSEQRESLININMCDQE 465
             LL    + DPV+  +      +         +++S+ DSEQ ESLI+++   QE
Sbjct:   471 LLCHYNNWDPVMVGVRRVFAFICRK---HRIQRVSE-DSEQCESLISMHSVSQE 520

GO:0016020 "membrane" evidence=IEA

UNIPROTKB|A6QL92 SLC35F5 "Solute carrier family 35 member F5" [Bos taurus (taxid:9913)]

 Score = 444 (161.4 bits), Expect = 6.6e-42, P = 6.6e-42
 Identities = 142/471 (30%), Positives = 218/471 (46%)

Query:    23 QRHALGCFVLILVDILWALSSEIVKKVDQHVEDESYFTDQTEPPGELKFPLHNLFIQVFL 82
             +R ALG  +L+LVD++W  SSE+           SY   Q   P    F   ++F+   L
Sbjct:    67 KRMALGIVILLLVDVIWVASSELT----------SYVFTQYNKPFFSTFAKTSMFVLYLL 116

Query:    83 LVSIKK--LQSASRGLHGK--VLFXXXXXXXXX-XXXXXMRKH--------VRFSKL-TE 128
                + K   Q  +RG  GK    F               M           V+F  L +E
Sbjct:   117 GFIVWKPWRQQCTRGFRGKHATFFADAEGYFAACTTDTTMNSSLSEPLYVPVKFHDLPSE 176

Query:   129 RPQVLGVPA-----------SFLMEAPVRHLSDKEANEALLARLSYQATLRTADFTFIQS 177
             +P+   +             S +ME  +R L    A EA L+R+SY  T++  +      
Sbjct:   177 KPENTNIDTEKIPKKSRVRFSNIME--IRQLPSSHALEAKLSRMSYP-TVKEQESLLKTV 233

Query:   178 TKYNIPQVAKVAFVFSFLRFGAEYTF--TLLGAEAGTVALIYSSSSVLTLLICAXXXXXX 235
              K    QVAK++F F F+ F A +++   L   +   V ++ S+S + TL++ A      
Sbjct:   234 GKLTATQVAKISFFFCFVWFLANFSYQEALSDTQVAIVNILSSTSGLFTLILAAMFPSNS 293

Query:   236 XXXXXXXKCVTVCISVCGLILVTISDVYMEHLHIPSGSFLSLVSALFYSLYIVFLRR-LE 294
                    K + V +S+ G++LV +S           GS  SLV A+ Y++YIV ++R ++
Sbjct:   294 GDRFTLSKLLAVILSIGGVVLVNLSGSEKSPGRNTIGSIWSLVGAMLYAVYIVMIKRKVD 353

Query:   295 HEEKLDIVLFYGFVGLYNCXXXXXXXXXXHYNSWEVFSLPDRDQWVILLIEGLIGSVLTE 354
              E+KLDI +F+GFVGL+N           HY  +E F  P++   + ++I GLIG+VL+E
Sbjct:   354 REDKLDIPMFFGFVGLFNLLLLWPGFFLLHYTGFEDFEFPNKVVLMCIVINGLIGTVLSE 413

Query:   355 TLWLWGMLLTSPLIATLGLGLIVPLSMIANTSLYHVTYPRLXXXXXXXXXXXXXXSILLA 414
              LWLWG  LTS LI TL L L +PLS+IA+  +  V +  L              + LL 
Sbjct:   414 FLWLWGCFLTSSLIGTLALSLTIPLSIIADMCMQKVQFSWLFFAGAIPVFFSFFIATLLC 473

Query:   415 QMASRDPVLEILLSCVTSLSGPSLGRTSKKISDADSEQRESLININMCDQE 465
                + DPV+  +      +         +K+ + DSEQ ESLI ++   QE
Sbjct:   474 HYNNWDPVMVGIRRIFAFICRK---HRIQKVPE-DSEQCESLIPMHGVSQE 520

GO:0016021 "integral to membrane" evidence=IEA

GO:0006810 "transport" evidence=IEA

UNIPROTKB|F1RY25 SLC35F5 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 443 (161.0 bits), Expect = 8.4e-42, P = 8.4e-42
 Identities = 142/471 (30%), Positives = 217/471 (46%)

Query:    23 QRHALGCFVLILVDILWALSSEIVKKVDQHVEDESYFTDQTEPPGELKFPLHNLFIQVFL 82
             +R ALG  +L+LVD++W  SSE+           SY   Q   P    F   ++F+   L
Sbjct:    67 RRLALGIVILLLVDVIWVASSELT----------SYVFTQYNKPFFSTFAKTSMFVLYLL 116

Query:    83 LVSIKK--LQSASRGLHGK--VLFXXXXXXXXX-XXXXXMRKH--------VRFSKL-TE 128
                I K   Q  +RG  GK    F               M           V+F  L +E
Sbjct:   117 GFIIWKPWRQQCTRGFRGKHAAFFADAEGYFAACTTDTTMNSSLSEPLYVPVKFHDLPSE 176

Query:   129 RPQVLGVPA-----------SFLMEAPVRHLSDKEANEALLARLSYQATLRTADFTFIQS 177
             +P+   +             S +ME  +R L    A EA L+R+SY  T++  +  F   
Sbjct:   177 KPENTNIDTEKAPKKSRVRFSNIME--IRQLPSSHALEAKLSRMSYP-TVKEQESLFKTV 233

Query:   178 TKYNIPQVAKVAFVFSFLRFGAEYTF--TLLGAEAGTVALIYSSSSVLTLLICAXXXXXX 235
              K    QVAK++F F F+ F A  ++   L   +   V ++ S+S + TL++ A      
Sbjct:   234 GKLTATQVAKISFFFCFVWFLANLSYQEALSDTQVAIVNILSSTSGLFTLILAAVFPSNS 293

Query:   236 XXXXXXXKCVTVCISVCGLILVTISDVYMEHLHIPSGSFLSLVSALFYSLYIVFLRR-LE 294
                    K + V +S+ G++LV +S           GS  SLV A+ Y++YIV ++R ++
Sbjct:   294 GDRFTLSKLLAVILSIGGVVLVNLSGSEKSAGRDTIGSIWSLVGAMLYAVYIVMIKRKVD 353

Query:   295 HEEKLDIVLFYGFVGLYNCXXXXXXXXXXHYNSWEVFSLPDRDQWVILLIEGLIGSVLTE 354
              E+KLDI +F+GFVGL+N           HY  +E F  P++   + +++ GLIG+VL+E
Sbjct:   354 REDKLDIPMFFGFVGLFNLLLLWPGFFLLHYTGFEDFEFPNKVVLMCIIVNGLIGTVLSE 413

Query:   355 TLWLWGMLLTSPLIATLGLGLIVPLSMIANTSLYHVTYPRLXXXXXXXXXXXXXXSILLA 414
              LWLWG  LTS LI TL L L +PLS+IA+  +  V +  L                LL 
Sbjct:   414 FLWLWGCFLTSSLIGTLALSLTIPLSIIADMCMQKVQFSWLFFAGAIHVFFSFFIVTLLC 473

Query:   415 QMASRDPVLEILLSCVTSLSGPSLGRTSKKISDADSEQRESLININMCDQE 465
                + DPV+  +      +         +++ + DSEQ ESLI ++   QE
Sbjct:   474 HYNNWDPVMVGIRRIFVFICRK---HRIQRVPE-DSEQCESLIPMHSVSQE 520

GO:0016020 "membrane" evidence=IEA

MGI|MGI:1921400 Slc35f5 "solute carrier family 35, member F5" [Mus musculus (taxid:10090)]

 Score = 442 (160.7 bits), Expect = 1.1e-41, P = 1.1e-41
 Identities = 145/474 (30%), Positives = 219/474 (46%)

Query:    20 SRFQRHALGCFVLILVDILWALSSEIVKKVDQHVEDESYFTDQTEPPGELKFPLHNLFIQ 79
             S+ +R ALG  +L+LVD++W  SSE+           SY   Q   P    F   ++F+ 
Sbjct:    64 SQRRRMALGIVILLLVDVIWVASSELT----------SYVFTQYNKPFFSTFAKTSMFVL 113

Query:    80 VFLLVSIKK--LQSASRGLHGK--VLFXXXXXXXXX-XXXXXMRKH--------VRFSKL 126
               L   I K   Q  +RG  GK    F               M           V+F  L
Sbjct:   114 YLLGFIIWKPWRQQCTRGFRGKPAAFFADAEGYFAACTTDTSMSSSLSEPLYVPVKFHDL 173

Query:   127 -----------TER-PQVLGVPASFLMEAPVRHLSDKEANEALLARLSYQATLRTADFTF 174
                        TE+ P+   V  S +ME  +R L    A EA L+R+SY  T++  +   
Sbjct:   174 PSEKLESTNIGTEKTPKKSRVRFSNIME--IRQLPSSHALEAKLSRMSYP-TVKDQESIL 230

Query:   175 IQSTKYNIPQVAKVAFVFSFLRFGAEYTF--TLLGAEAGTVALIYSSSSVLTLLICAXXX 232
                 K    QVAK++F F F+ F A  ++   L   +   V ++ S+S + TL++ A   
Sbjct:   231 KTVGKLTATQVAKISFFFCFVWFLANLSYQEALSDTQVAIVNILSSTSGLFTLILAAVFP 290

Query:   233 XXXXXXXXXXKCVTVCISVCGLILVTISDVYMEHLHIPSGSFLSLVSALFYSLYIVFLRR 292
                       K + V +S+ G++LV +S           GS  SL  A+FY++YIV ++R
Sbjct:   291 SNSGDRFTLSKLLAVILSIGGVVLVNLSGSEKSAGRDTIGSIWSLAGAMFYAVYIVMIKR 350

Query:   293 -LEHEEKLDIVLFYGFVGLYNCXXXXXXXXXXHYNSWEVFSLPDRDQWVILLIEGLIGSV 351
              ++ E+KLDI +F+GFVGL+N           HY  +E F  P++   + ++I GLIG+V
Sbjct:   351 KVDREDKLDIPMFFGFVGLFNLLLLWPGFFLLHYTGFEDFEFPNKVVLLCIIINGLIGTV 410

Query:   352 LTETLWLWGMLLTSPLIATLGLGLIVPLSMIANTSLYHVTYPRLXXXXXXXXXXXXXXSI 411
             L+E LWLWG  LTS LI TL L L +PLS+IA+  +  V +  L                
Sbjct:   411 LSEFLWLWGCFLTSSLIGTLALSLTIPLSIIADMCMQKVQFSWLFFAGAIPVFFSFFIVT 470

Query:   412 LLAQMASRDPVLEILLSCVTSLSGPSLGRTSKKISDADSEQRESLININMCDQE 465
             LL    + DPV+  +      +         +++ + DSEQ ESLI+++   QE
Sbjct:   471 LLCHYNNWDPVMVGVRRVFAFICRK---HRIQRVPE-DSEQCESLISMHSVSQE 520

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0006810 "transport" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|E2RAG9 SLC35F5 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 441 (160.3 bits), Expect = 1.4e-41, P = 1.4e-41
 Identities = 142/471 (30%), Positives = 218/471 (46%)

Query:    23 QRHALGCFVLILVDILWALSSEIVKKVDQHVEDESYFTDQTEPPGELKFPLHNLFIQVFL 82
             +R ALG  +L+LVD++W  SSE+           SY   Q   P    F   ++F+   L
Sbjct:    67 RRMALGIVILLLVDVIWVASSELT----------SYVFTQYNKPFFSTFAKTSMFVLYLL 116

Query:    83 LVSIKK--LQSASRGLHGK--VLFXXXXXXXXX-XXXXXMRKH--------VRFSKL-TE 128
                I K   Q  +RG  GK    F               M           V+F  + +E
Sbjct:   117 GFIIWKPWRQQCTRGFRGKHAAFFADAEGYFAACTTDTTMNSSLSEPLYVPVKFHDIPSE 176

Query:   129 RPQVLGVPA-----------SFLMEAPVRHLSDKEANEALLARLSYQATLRTADFTFIQS 177
             +P+   + A           S +ME  +R L    A EA L+R+SY  T++  +      
Sbjct:   177 KPENTNIDAEKTPKKSRVRFSNIME--IRQLPSSHALEAKLSRMSYP-TVKEQESLLKTV 233

Query:   178 TKYNIPQVAKVAFVFSFLRFGAEYTF--TLLGAEAGTVALIYSSSSVLTLLICAXXXXXX 235
              K    QVAK++F F F+ F A  ++   L   +   V ++ S+S + TL++ A      
Sbjct:   234 GKLTTTQVAKISFFFCFVWFLANLSYQEALSDTQVAIVNILSSTSGLFTLILAAVFPSNS 293

Query:   236 XXXXXXXKCVTVCISVCGLILVTISDVYMEHLHIPSGSFLSLVSALFYSLYIVFLRR-LE 294
                    K + V +S+ G++LV +S           GS  SLV A+ Y++YIV ++R ++
Sbjct:   294 GDRFTLSKLLAVILSIGGVVLVNLSGSEKSAGRDTIGSIWSLVGAMLYAVYIVMIKRKVD 353

Query:   295 HEEKLDIVLFYGFVGLYNCXXXXXXXXXXHYNSWEVFSLPDRDQWVILLIEGLIGSVLTE 354
              E+KLDI +F+GFVGL+N           HY  +E F  P++   + ++I GLIG+VL+E
Sbjct:   354 REDKLDIPMFFGFVGLFNLLLLWPGFFLLHYTGFEDFEFPNKVVLMCIIINGLIGTVLSE 413

Query:   355 TLWLWGMLLTSPLIATLGLGLIVPLSMIANTSLYHVTYPRLXXXXXXXXXXXXXXSILLA 414
              LWLWG  LTS LI TL L L +PLS+IA+  +  V +  L              + LL 
Sbjct:   414 FLWLWGCFLTSSLIGTLALSLTIPLSIIADMCMQKVQFSWLFFAGAIPVFFSFFIATLLC 473

Query:   415 QMASRDPVLEILLSCVTSLSGPSLGRTSKKISDADSEQRESLININMCDQE 465
                + DPV+  +      +         +++ + DSEQ ESLI ++   QE
Sbjct:   474 HYNNWDPVMVGIRRIFAFICRK---HRIQRVPE-DSEQCESLIPMHGVSQE 520

GO:0016020 "membrane" evidence=IEA

UNIPROTKB|F1NEN4 SLC35F5 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 436 (158.5 bits), Expect = 4.6e-41, P = 4.6e-41
 Identities = 143/476 (30%), Positives = 219/476 (46%)

Query:    20 SRFQRHALGCFVLILVDILWALSSEIVKKVDQHVEDESYFTDQTEPPGELKFPLHNLFIQ 79
             S+ +R ALG  +L+LVD++W  SSE+   V         FT   +P     F   ++F+ 
Sbjct:    20 SQRRRMALGIVILLLVDVIWVASSELTSYV---------FTKYNKPFFST-FAKTSMFVL 69

Query:    80 VFLLVSIKK--LQSASRGLHGK--VLFX---------XXXXXXXXXXXXXMRKHVRFSKL 126
               L   + K   Q  +RG  G+    F                       +   V+F  L
Sbjct:    70 YLLGFIVWKPWRQQCTRGFRGRHAAFFADAEGYFAACTTDNAVNSSLSEPLYVPVKFHDL 129

Query:   127 -TER-----------PQVLGVPASFLMEAPVRHLSDKEANEALLARLSYQATLRTADFTF 174
              TE+           P+   V  S +ME  +R L    A EA L+R+SY A ++  +   
Sbjct:   130 PTEKSGSNNNDTEKTPKKPRVRFSNIME--IRQLPSSHALEAKLSRMSYPA-VKEQESIL 186

Query:   175 IQSTKYNIPQVAKVAFVFSFLRFGAEYTF--TLLGAEAGTVALIYSSSSVLTLLICAXXX 232
                 K    QVAK++F F F+ F A +++   L   +   V ++ S+S + TL++ A   
Sbjct:   187 KTVGKLTATQVAKISFFFCFVWFLANFSYQEALSDTQVAIVNILSSTSGLFTLILAAVFP 246

Query:   233 XXXXXXXXXXKCVTVCISVCGLILVTISDVYMEHLHIPSGSFLSLVSALFYSLYIVFLRR 292
                       K + V +S+ G++LV +S           GS  SLV A+ Y++YIV ++R
Sbjct:   247 SNSGDRFTLSKLLAVFLSIGGVVLVNLSGSEKSPGRDTIGSLWSLVGAMLYAVYIVMIKR 306

Query:   293 -LEHEEKLDIVLFYGFVGLYNCXXXXXXXXXXHYNSWEVFSLPDRDQWVILLIEGLIGSV 351
              ++ E+KLDI +F+GFVGL+N           HY  +E F  P +  W+ ++I GLIG+V
Sbjct:   307 KVDREDKLDIPMFFGFVGLFNLLLLWPGFFLLHYTGFEAFEFPSKLIWMCIVINGLIGTV 366

Query:   352 LTETLWLWGMLLTSPLIATLGLGLIVPLSMIANTSLYHVTYPRLXXXXXXXXXXXXXXSI 411
             L+E LWLWG  LTS LI TL L L +PLS+IA+  +  V +  L                
Sbjct:   367 LSEFLWLWGCFLTSSLIGTLALSLTIPLSIIADMCMQKVQFSWLFFAGAVPVFFSFFIVT 426

Query:   412 LLAQMASRDPVLEILLSCVTSLSGPSLGRTSKKISDADSEQRESLININMCDQEVD 467
             LL    + DPV+  +      +      R  +     +SEQ ESLI ++   Q+ D
Sbjct:   427 LLCHYNNWDPVMVGIRRVFAFICRKH--RIQRM--PEESEQCESLIPMHSVSQDGD 478

GO:0016020 "membrane" evidence=IEA

UNIPROTKB|B8ZZY4 SLC35F5 "Solute carrier family 35 member F5" [Homo sapiens (taxid:9606)]

 Score = 431 (156.8 bits), Expect = 1.6e-40, P = 1.6e-40
 Identities = 140/471 (29%), Positives = 216/471 (45%)

Query:    23 QRHALGCFVLILVDILWALSSEIVKKVDQHVEDESYFTDQTEPPGELKFPLHNLFIQVFL 82
             +R ALG  +L+LVD++W  SSE+           SY   Q   P    F   ++F+   L
Sbjct:    61 RRMALGIVILLLVDVIWVASSELT----------SYVFTQYNKPFFSTFAKTSMFVLYLL 110

Query:    83 LVSIKK--LQSASRGLHGK--VLFXXXXXXXXX-XXXXXMRKH--------VRFSKL-TE 128
                I K   Q  +RGL GK    F               M           V+F  L +E
Sbjct:   111 GFIIWKPWRQQCTRGLRGKHAAFFADAEGYFAACTTDTTMNSSLSEPLYVPVKFHDLPSE 170

Query:   129 RPQVLGVPA-----------SFLMEAPVRHLSDKEANEALLARLSYQATLRTADFTFIQS 177
             +P+   +             S +ME  +R L    A EA L+R+SY    + +    +  
Sbjct:   171 KPESTNIDTEKTPKKSRVRFSNIME--IRQLPSSHALEAKLSRMSYPVKEQESILKTVG- 227

Query:   178 TKYNIPQVAKVAFVFSFLRFGAEYTF--TLLGAEAGTVALIYSSSSVLTLLICAXXXXXX 235
              K    QVAK++F F F+ F A  ++   L   +   V ++ S+S + TL++ A      
Sbjct:   228 -KLTATQVAKISFFFCFVWFLANLSYQEALSDTQVAIVNILSSTSGLFTLILAAVFPSNS 286

Query:   236 XXXXXXXKCVTVCISVCGLILVTISDVYMEHLHIPSGSFLSLVSALFYSLYIVFLRR-LE 294
                    K + V +S+ G++LV ++           GS  SL  A+ Y++YIV ++R ++
Sbjct:   287 GDRFTLSKLLAVILSIGGVVLVNLAGSEKPAGRDTVGSIWSLAGAMLYAVYIVMIKRKVD 346

Query:   295 HEEKLDIVLFYGFVGLYNCXXXXXXXXXXHYNSWEVFSLPDRDQWVILLIEGLIGSVLTE 354
              E+KLDI +F+GFVGL+N           HY  +E F  P++   + ++I GLIG+VL+E
Sbjct:   347 REDKLDIPMFFGFVGLFNLLLLWPGFFLLHYTGFEDFEFPNKVVLMCIIINGLIGTVLSE 406

Query:   355 TLWLWGMLLTSPLIATLGLGLIVPLSMIANTSLYHVTYPRLXXXXXXXXXXXXXXSILLA 414
              LWLWG  LTS LI TL L L +PLS+IA+  +  V +  L                LL 
Sbjct:   407 FLWLWGCFLTSSLIGTLALSLTIPLSIIADMCMQKVQFSWLFFAGAIPVFFSFFIVTLLC 466

Query:   415 QMASRDPVLEILLSCVTSLSGPSLGRTSKKISDADSEQRESLININMCDQE 465
                + DPV+  +      +         +++ + DSEQ ESLI+++   QE
Sbjct:   467 HYNNWDPVMVGIRRIFAFICRK---HRIQRVPE-DSEQCESLISMHSVSQE 513

GO:0016020 "membrane" evidence=IEA

UNIPROTKB|Q8WV83 SLC35F5 "Solute carrier family 35 member F5" [Homo sapiens (taxid:9606)]

 Score = 431 (156.8 bits), Expect = 1.6e-40, P = 1.6e-40
 Identities = 140/471 (29%), Positives = 216/471 (45%)

Query:    23 QRHALGCFVLILVDILWALSSEIVKKVDQHVEDESYFTDQTEPPGELKFPLHNLFIQVFL 82
             +R ALG  +L+LVD++W  SSE+           SY   Q   P    F   ++F+   L
Sbjct:    67 RRMALGIVILLLVDVIWVASSELT----------SYVFTQYNKPFFSTFAKTSMFVLYLL 116

Query:    83 LVSIKK--LQSASRGLHGK--VLFXXXXXXXXX-XXXXXMRKH--------VRFSKL-TE 128
                I K   Q  +RGL GK    F               M           V+F  L +E
Sbjct:   117 GFIIWKPWRQQCTRGLRGKHAAFFADAEGYFAACTTDTTMNSSLSEPLYVPVKFHDLPSE 176

Query:   129 RPQVLGVPA-----------SFLMEAPVRHLSDKEANEALLARLSYQATLRTADFTFIQS 177
             +P+   +             S +ME  +R L    A EA L+R+SY    + +    +  
Sbjct:   177 KPESTNIDTEKTPKKSRVRFSNIME--IRQLPSSHALEAKLSRMSYPVKEQESILKTVG- 233

Query:   178 TKYNIPQVAKVAFVFSFLRFGAEYTF--TLLGAEAGTVALIYSSSSVLTLLICAXXXXXX 235
              K    QVAK++F F F+ F A  ++   L   +   V ++ S+S + TL++ A      
Sbjct:   234 -KLTATQVAKISFFFCFVWFLANLSYQEALSDTQVAIVNILSSTSGLFTLILAAVFPSNS 292

Query:   236 XXXXXXXKCVTVCISVCGLILVTISDVYMEHLHIPSGSFLSLVSALFYSLYIVFLRR-LE 294
                    K + V +S+ G++LV ++           GS  SL  A+ Y++YIV ++R ++
Sbjct:   293 GDRFTLSKLLAVILSIGGVVLVNLAGSEKPAGRDTVGSIWSLAGAMLYAVYIVMIKRKVD 352

Query:   295 HEEKLDIVLFYGFVGLYNCXXXXXXXXXXHYNSWEVFSLPDRDQWVILLIEGLIGSVLTE 354
              E+KLDI +F+GFVGL+N           HY  +E F  P++   + ++I GLIG+VL+E
Sbjct:   353 REDKLDIPMFFGFVGLFNLLLLWPGFFLLHYTGFEDFEFPNKVVLMCIIINGLIGTVLSE 412

Query:   355 TLWLWGMLLTSPLIATLGLGLIVPLSMIANTSLYHVTYPRLXXXXXXXXXXXXXXSILLA 414
              LWLWG  LTS LI TL L L +PLS+IA+  +  V +  L                LL 
Sbjct:   413 FLWLWGCFLTSSLIGTLALSLTIPLSIIADMCMQKVQFSWLFFAGAIPVFFSFFIVTLLC 472

Query:   415 QMASRDPVLEILLSCVTSLSGPSLGRTSKKISDADSEQRESLININMCDQE 465
                + DPV+  +      +         +++ + DSEQ ESLI+++   QE
Sbjct:   473 HYNNWDPVMVGIRRIFAFICRK---HRIQRVPE-DSEQCESLISMHSVSQE 519

GO:0006810 "transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|H7C0S5 SLC35F5 "Solute carrier family 35 member F5" [Homo sapiens (taxid:9606)]

 Score = 282 (104.3 bits), Expect = 1.0e-24, P = 1.0e-24
 Identities = 73/235 (31%), Positives = 112/235 (47%)

Query:   201 YTFTLLGAEAGTVALIYSSSSVLTLLICAXXXXXXXXXXXXXKCVTVCIS---------- 250
             Y   L   +   V ++ S+S + TL++ A             K + V +           
Sbjct:     8 YQEALSDTQVAIVNILSSTSGLFTLILAAVFPSNSGDRFTLSKLLAVILRLDKEGNGYKI 67

Query:   251 ---VCGLILVTISDVYMEHLHIPSGSFLSLVSALFYSLYIVFLRR-LEHEEKLDIVLFYG 306
                + G++LV ++           GS  SL  A+ Y++YIV ++R ++ E+KLDI +F+G
Sbjct:    68 LNFIGGVVLVNLAGSEKPAGRDTVGSIWSLAGAMLYAVYIVMIKRKVDREDKLDIPMFFG 127

Query:   307 FVGLYNCXXXXXXXXXXHYNSWEVFSLPDRDQWVILLIEGLIGSVLTETLWLWGMLLTSP 366
             FVGL+N           HY  +E F  P++   + ++I GLIG+VL+E LWLWG  LTS 
Sbjct:   128 FVGLFNLLLLWPGFFLLHYTGFEDFEFPNKVVLMCIIINGLIGTVLSEFLWLWGCFLTSS 187

Query:   367 LIATLGLGLIVPLSMIANTSLYHVTYPRLXXXXXXXXXXXXXXSILLAQMASRDP 421
             LI TL L L +PLS+IA+  +  V +  L                LL    + DP
Sbjct:   188 LIGTLALSLTIPLSIIADMCMQKVQFSWLFFAGAIPVFFSFFIVTLLCHYNNWDP 242

GO:0016020 "membrane" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q5R6J3	S35F5_PONAB	No assigned EC number	0.3519	0.9085	0.8164	yes	N/A
A6QL92	S35F5_BOVIN	No assigned EC number	0.3609	0.9063	0.8129	yes	N/A
Q8WV83	S35F5_HUMAN	No assigned EC number	0.3556	0.9191	0.8260	yes	N/A
Q8R314	S35F5_MOUSE	No assigned EC number	0.3642	0.9148	0.8206	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	470
COG0697	292	COG0697, RhaT, Permeases of the drug/metabolite tr	9e-10
TIGR00950	260	TIGR00950, 2A78, Carboxylate/Amino Acid/Amine Tran	7e-07

>gnl|CDD|223769 COG0697, RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

 Score = 59.5 bits (144), Expect = 9e-10
 Identities = 41/228 (17%), Positives = 82/228 (35%), Gaps = 11/228 (4%)

Query: 188 VAFVFSFLRFGAEYTFTLLGAEAGTVALIYSSSSVLTLLICAFFPSSSSDKFSLSKCVTV 247
           +  +             L    A   +LI     + T L+         ++ SL + + +
Sbjct: 74  LLALLGLALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLL--LLGERLSLLQILGI 131

Query: 248 CISVCGLILVTISDVYMEHLHIPSGSFLSLVSALFYSLYIVFLRRLEHEEKLDIVLFYGF 307
            +++ G++L+ +       +    G  L+L +AL ++LY   ++RL     + + L    
Sbjct: 132 LLALAGVLLILLGGGG-GGILSLLGLLLALAAALLWALYTALVKRLSRLGPVTLALLLQL 190

Query: 308 VGLYNCLLLWPLFFLLHYNSWEVFSLPDRDQWVILLIEGLIGSVLTETLWLWGMLLTSPL 367
           +     LLL   F           +      W++LL  G+  + L   LW + + L    
Sbjct: 191 LLA--LLLLLLFFLSGFGAPILSRA------WLLLLYLGVFSTGLAYLLWYYALRLLGAS 242

Query: 368 IATLGLGLIVPLSMIANTSLYHVTYPRLFYVGAVPVVFAFVASILLAQ 415
           +  L   L    + +    L          +GA  VV   + + L A+
Sbjct: 243 LVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASLRAR 290

Length = 292

>gnl|CDD|233205 TIGR00950, 2A78, Carboxylate/Amino Acid/Amine Transporter

 Score = 50.0 bits (120), Expect = 7e-07
 Identities = 52/230 (22%), Positives = 89/230 (38%), Gaps = 16/230 (6%)

Query: 181 NIPQVAKVAFVFSFLRFG---AEYTFTLLGAEAGTVALIYSSSSVLTLLICAFFPSSSSD 237
              +      +   L+ G     Y   +     G  AL+   + +   L          +
Sbjct: 41  PPLKRLLRLLLLGALQIGVFYVLYFVAVKRLPVGEAALLLYLAPLYVTL---LSDLMGKE 97

Query: 238 KFSLSKCVTVCISVCGLILVTISDVYMEHLHIPSGSFLSLVSALFYSLYIVFLRRLEHEE 297
           +      +   + + G +L+            P+G  L L S + ++L  V  +RL  +E
Sbjct: 98  RPRKLVLLAAVLGLAGAVLLLSDGNLS---INPAGLLLGLGSGISFALGTVLYKRLVKKE 154

Query: 298 KLDIVLFYGFVGLYNCLLLWPLFFLLHYNSWEVFSLPDRDQWVILLIEGLIGSVLTETLW 357
             +++ F G+V L   LLL P F      + +  SL    QW  LL  GLIG+ L   LW
Sbjct: 155 GPELLQFTGWVLLLGALLLLP-FAWFLGPNPQALSL----QWGALLYLGLIGTALAYFLW 209

Query: 358 LWGMLLTSPLIATLGLGLIVPL-SMIANTSLYHVTYPRLFYVGAVPVVFA 406
             G+ L  P  A++ L L  PL +++    +   T      +G   ++ A
Sbjct: 210 NKGLTLVDPSAASI-LALAEPLVALLLGLLILGETLSLPQLIGGALIIAA 258

[Transport and binding proteins, Amino acids, peptides and amines]. Length = 260

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	470
KOG2765|consensus	416		100.0
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	99.94
PLN00411	358	nodulin MtN21 family protein; Provisional	99.91
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	99.88
KOG4314|consensus	290		99.88
PRK11272	292	putative DMT superfamily transporter inner membran	99.88
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	99.88
PRK11689	295	aromatic amino acid exporter; Provisional	99.87
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	99.87
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	99.85
PRK10532	293	threonine and homoserine efflux system; Provisiona	99.83
PRK15430	296	putative chloramphenical resistance permease RarD;	99.83
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	99.79
COG0697	292	RhaT Permeases of the drug/metabolite transporter	99.78
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	99.75
KOG4510|consensus	346		99.7
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	99.67
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	99.64
KOG1441|consensus	316		99.55
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	99.44
KOG3912|consensus	372		99.31
KOG1443|consensus	349		99.29
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	99.28
KOG2766|consensus	336		99.26
KOG2234|consensus	345		99.24
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	99.09
COG2962	293	RarD Predicted permeases [General function predict	99.09
KOG1580|consensus	337		99.05
KOG1444|consensus	314		98.98
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	98.89
KOG1442|consensus	347		98.75
COG2510	140	Predicted membrane protein [Function unknown]	98.74
KOG1582|consensus	367		98.69
KOG1581|consensus	327		98.63
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	98.6
KOG1583|consensus	330		98.56
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	98.45
PF13536	113	EmrE: Multidrug resistance efflux transporter	98.4
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	98.27
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	98.26
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	98.23
PRK13499	345	rhamnose-proton symporter; Provisional	98.15
PRK15430	296	putative chloramphenical resistance permease RarD;	98.1
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	98.03
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	97.99
COG5070	309	VRG4 Nucleotide-sugar transporter [Carbohydrate tr	97.97
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	97.9
PF13536	113	EmrE: Multidrug resistance efflux transporter	97.79
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	97.71
PRK11272	292	putative DMT superfamily transporter inner membran	97.47
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	97.46
COG2510	140	Predicted membrane protein [Function unknown]	97.43
PLN00411	358	nodulin MtN21 family protein; Provisional	97.41
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	97.34
KOG2922|consensus	335		97.15
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	97.06
COG2962	293	RarD Predicted permeases [General function predict	97.04
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	97.03
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	97.03
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	96.98
COG0697	292	RhaT Permeases of the drug/metabolite transporter	96.95
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	96.94
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	96.84
PRK11689	295	aromatic amino acid exporter; Provisional	96.83
PRK09541	110	emrE multidrug efflux protein; Reviewed	96.79
PRK13499	345	rhamnose-proton symporter; Provisional	96.48
PRK11431	105	multidrug efflux system protein; Provisional	96.45
PRK10532	293	threonine and homoserine efflux system; Provisiona	96.45
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	96.44
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	96.41
COG2076	106	EmrE Membrane transporters of cations and cationic	96.34
COG4975	288	GlcU Putative glucose uptake permease [Carbohydrat	96.24
PRK10650	109	multidrug efflux system protein MdtI; Provisional	95.99
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	95.92
PRK09541	110	emrE multidrug efflux protein; Reviewed	95.86
PF06379	344	RhaT: L-rhamnose-proton symport protein (RhaT); In	95.81
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	95.76
PRK10650	109	multidrug efflux system protein MdtI; Provisional	95.19
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	95.04
PRK11431	105	multidrug efflux system protein; Provisional	94.93
PF06379	344	RhaT: L-rhamnose-proton symport protein (RhaT); In	94.77
COG2076	106	EmrE Membrane transporters of cations and cationic	94.71
PF04657	138	DUF606: Protein of unknown function, DUF606; Inter	94.54
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	94.03
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	94.03
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	92.8
COG3238	150	Uncharacterized protein conserved in bacteria [Fun	91.75
PF07857	254	DUF1632: CEO family (DUF1632); InterPro: IPR012435	91.24
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	89.26
KOG2765|consensus	416		88.25
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	84.64
KOG1444|consensus	314		84.0
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	82.61
KOG4314|consensus	290		81.33
KOG3912|consensus	372		80.28
PF11742	78	DUF3302: Protein of unknown function (DUF3302); In	80.14

>KOG2765|consensus

Probab=100.00  E-value=1.9e-62  Score=484.43  Aligned_cols=397  Identities=28%  Similarity=0.460  Sum_probs=303.2

Q ss_pred             hhhhhhhhHHHhhHHHHHHHHHhhhhhHHHHHHHhcc-CCCCCccccCCCCCCcccccchhhhhhhhhhhhhhhhhhhcc
Q psy16816         16 NVLLSRFQRHALGCFVLILVDILWALSSEIVKKVDQH-VEDESYFTDQTEPPGELKFPLHNLFIQVFLLVSIKKLQSASR   94 (470)
Q Consensus        16 ~~~~~~~~r~~~G~~ll~~v~~~Wv~S~~l~~~if~~-~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~   94 (470)
                      +.+.+++|||++|+++|++|+++||+||||||+||++ .|++|||.||.           |+++|.+++.|.. .+++.+
T Consensus         3 ~~~~~~~~r~~lGl~lL~~V~viWV~SSeLT~~if~~~~f~kPFfiTY~-----------~ts~fivYL~~~~-~~d~~~   70 (416)
T KOG2765|consen    3 RSGFTKRWRWTLGLVLLLLVVVIWVASSELTQSIFEDYNFRKPFFITYL-----------KTSLFIVYLPPFI-LIDAPW   70 (416)
T ss_pred             cchhhhhhHHHHHHHHHHHHHHHHHhHHHHHHHHHhhcccCCceeEeee-----------cccceehhhhhhh-hhcchh
Confidence            4567788999999999999999999999999999998 88999999982           3334555555433 232211


Q ss_pred             cCcccc-c-cccCCCC-CCCccccccchhccccccccCccccCCCcccccccccccCChhhHHHHHHHhhhHHHhhhhcc
Q psy16816         95 GLHGKV-L-FSGRSSG-TESETENSMRKHVRFSKLTERPQVLGVPASFLMEAPVRHLSDKEANEALLARLSYQATLRTAD  171 (470)
Q Consensus        95 ~~~~~~-~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  171 (470)
                      ...-.+ + ..++... .+++++-+..-   -.|..|    .+.++....++..++++..++....  ...-+.+...+.
T Consensus        71 ~~~~~R~~~~~~~~~~e~d~e~y~~~~~---~~~~~~----~~l~~~~~~~~~~~~l~s~~~~~~~--s~~~e~~~~~~~  141 (416)
T KOG2765|consen   71 RILETRSKRSNHAIMEEADAEGYFSACT---TDKTME----SGLSGPESVPDKSPLLGSGEEEKPE--STNLEVREKANT  141 (416)
T ss_pred             hhhhhhccccchhhhhhhhhhccccccc---cccccc----cccCCceeeeccccccccccccCCC--CccccccccCCc
Confidence            110000 0 0000000 00000000000   001111    1222222222222222211100000  000000000000


Q ss_pred             ---cccccCCCCChHHHHHHHHHHHHHHHHHHHHHH--hhccchHHHHHHHhhHHHHHHHHHHHhcCCCCCccchhhHHH
Q psy16816        172 ---FTFIQSTKYNIPQVAKVAFVFSFLRFGAEYTFT--LLGAEAGTVALIYSSSSVLTLLICAFFPSSSSDKFSLSKCVT  246 (470)
Q Consensus       172 ---~~~~~~~~l~~~~~~~l~~~~~~l~~~~n~~~~--L~~tsvs~atiL~stsPvft~lla~lf~~~~~ek~s~~k~ig  246 (470)
                         +..+.+++++.++++++++.||++||++||+|+  |+||++++.+++++|+.+||++++.+|.   .||+++.|+++
T Consensus       142 ~~rs~l~~~~~~t~~~~ak~sl~fc~lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~---~e~ft~sKlla  218 (416)
T KOG2765|consen  142 KKRSNLKERGKLTATQTAKLSLFFCPLWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFP---VERFTLSKLLA  218 (416)
T ss_pred             ccccchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcC---cchhhHHHHHH
Confidence               123446789999999999999999999999999  9999999999999999999999999998   99999999999


Q ss_pred             HHHHHHHhheeeecCccc----ccccchHHHHHHHHHHHHHHHHHHHH-HHhccC-CchhHHHHHHHHHHHHHHHHHHHH
Q psy16816        247 VCISVCGLILVTISDVYM----EHLHIPSGSFLSLVSALFYSLYIVFL-RRLEHE-EKLDIVLFYGFVGLYNCLLLWPLF  320 (470)
Q Consensus       247 vll~~~GVvli~~~~~~~----~~~~~~~G~llaL~sAl~~Al~~vl~-r~l~~~-~~~~~~~~~g~vglf~l~~l~p~~  320 (470)
                      ++++++||++++.+|...    .+.+..+|++++++||+.||+|.++. |+.++| +++|+++|||++|+|+++++||.+
T Consensus       219 v~~si~GViiVt~~~s~~~~~~~a~~~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l  298 (416)
T KOG2765|consen  219 VFVSIAGVIIVTMGDSKQNSDLPASRPLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPL  298 (416)
T ss_pred             HHHhhccEEEEEeccccccccCCccchhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHH
Confidence            999999999999997643    24567999999999999999999999 777777 699999999999999999999999


Q ss_pred             HHHhhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHhHHHHHHHHHHHHhCCCCCHHHHhHH
Q psy16816        321 FLLHYNSWEVFSLPDRDQWVILLIEGLIGSVLTETLWLWGMLLTSPLIATLGLGLIVPLSMIANTSLYHVTYPRLFYVGA  400 (470)
Q Consensus       321 ~~l~~~~~e~~~~p~~~~~~~ll~~gil~s~ls~~l~~~ai~~tspl~~tv~~~l~iPla~i~~~l~~ge~~s~~~iiG~  400 (470)
                      +++++++.|+|+.|+..+...++.++++++++++|+|.+|+.+|+|++++++++++||+|+++|+++.|.++++.+++|+
T Consensus       299 ~iL~~~~~e~F~lP~~~q~~~vv~~~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGs  378 (416)
T KOG2765|consen  299 IILDFFGEERFELPSSTQFSLVVFNNLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGS  378 (416)
T ss_pred             HHHHHhccCcccCCCCceeEeeeHhhHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHH
Confidence            99999999999999988888899999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhhhccccCChhhhhhhhhh-hccCCC
Q psy16816        401 VPVVFAFVASILLAQMASRDPVLEILLSCV-TSLSGP  436 (470)
Q Consensus       401 ~lIl~g~~l~~~~~~~~~~d~~~~~~~~~~-~~~~k~  436 (470)
                      +.|++|++++|+.++.+.+||.+...++++ ..||.+
T Consensus       379 i~Ifv~Fv~vn~~~~~~~~~~~~~~~r~~~~~~~~~~  415 (416)
T KOG2765|consen  379 IPIFVGFVIVNISSENSKKDPLMAIEREPGVEVCRPH  415 (416)
T ss_pred             HHHHHHHhheeccccccccccchheeeccceecCCCC
Confidence            999999999999999999999988887776 566654

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=99.94  E-value=3.5e-25  Score=223.96  Aligned_cols=220  Identities=20%  Similarity=0.280  Sum_probs=189.3

Q ss_pred             HHHHHHHHHHHHHHH--hhccchHHHHHHHhhHHHHHHHHHHHhcCCCCCccchhhHHHHHHHHHHhheeeecCccc---
Q psy16816        190 FVFSFLRFGAEYTFT--LLGAEAGTVALIYSSSSVLTLLICAFFPSSSSDKFSLSKCVTVCISVCGLILVTISDVYM---  264 (470)
Q Consensus       190 ~~~~~l~~~~n~~~~--L~~tsvs~atiL~stsPvft~lla~lf~~~~~ek~s~~k~igvll~~~GVvli~~~~~~~---  264 (470)
                      +..++++..+||+..  ++||+++++++|.+++-+|+++++++++   ++|+++.|++|++++++|++++...|...   
T Consensus        83 ~lla~~Dv~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL---~~ry~~~~~~gv~i~i~Gv~lv~~sD~~~~~~  159 (334)
T PF06027_consen   83 FLLALLDVEANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFL---KRRYSWFHILGVLICIAGVVLVVVSDVLSGSD  159 (334)
T ss_pred             HHHHHHHHHHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHH---HhhhhHHHHHHHHHHHhhhhheeeeccccccc
Confidence            345789999999999  9999999999999999999999999999   99999999999999999999999887543   


Q ss_pred             --ccccchHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhcccccccCCCHHHHHHH
Q psy16816        265 --EHLHIPSGSFLSLVSALFYSLYIVFLRRLEHEEKLDIVLFYGFVGLYNCLLLWPLFFLLHYNSWEVFSLPDRDQWVIL  342 (470)
Q Consensus       265 --~~~~~~~G~llaL~sAl~~Al~~vl~r~l~~~~~~~~~~~~g~vglf~l~~l~p~~~~l~~~~~e~~~~p~~~~~~~l  342 (470)
                        +.++...||+++++||++||+++|+.++.-+  +.+...++|++|+|+.++.++...+++..+++.++++.. .+.++
T Consensus       160 ~~~~~~~i~GDll~l~~a~lya~~nV~~E~~v~--~~~~~~~lg~~Glfg~ii~~iq~~ile~~~i~~~~w~~~-~~~~~  236 (334)
T PF06027_consen  160 SSSGSNPILGDLLALLGAILYAVSNVLEEKLVK--KAPRVEFLGMLGLFGFIISGIQLAILERSGIESIHWTSQ-VIGLL  236 (334)
T ss_pred             CCCCCccchhHHHHHHHHHHHHHHHHHHHHhcc--cCCHHHHHHHHHHHHHHHHHHHHHheehhhhhccCCChh-hHHHH
Confidence              2356799999999999999999999955544  234567889999999999998888888888887766543 33443


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHhHHHHHHHHHHHHhCCCCCHHHHhHHHHHHHHHHHHHhhhcc
Q psy16816        343 LIEGLIGSVLTETLWLWGMLLTSPLIATLGLGLIVPLSMIANTSLYHVTYPRLFYVGAVPVVFAFVASILLAQM  416 (470)
Q Consensus       343 l~~gil~s~ls~~l~~~ai~~tspl~~tv~~~l~iPla~i~~~l~~ge~~s~~~iiG~~lIl~g~~l~~~~~~~  416 (470)
                      +..++ +..+.|.++...+++++|+..++++....|.++++|++++|++++|.+++|.++|++|+++++..+++
T Consensus       237 v~~~~-~lf~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~~~~~~  309 (334)
T PF06027_consen  237 VGYAL-CLFLFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVYNLAESP  309 (334)
T ss_pred             HHHHH-HHHHHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheEEccCCc
Confidence            43333 46677888899999999999999988889999999999999999999999999999999999976544

Some of the sequences in this family are annotated as putative membrane proteins.

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=99.91  E-value=1.4e-22  Score=208.25  Aligned_cols=230  Identities=11%  Similarity=0.124  Sum_probs=161.6

Q ss_pred             CChHHHHHHHHHHHHHHHHHHHHHH--hhccchHHHHHHHhhHHHHHHHHHHHh------cCCCCCccchhhHHHHHHHH
Q psy16816        180 YNIPQVAKVAFVFSFLRFGAEYTFT--LLGAEAGTVALIYSSSSVLTLLICAFF------PSSSSDKFSLSKCVTVCISV  251 (470)
Q Consensus       180 l~~~~~~~l~~~~~~l~~~~n~~~~--L~~tsvs~atiL~stsPvft~lla~lf------~~~~~ek~s~~k~igvll~~  251 (470)
                      .++++..++.+..... ++.+.+++  ++|++++.++++.++.|+||+++++++      +   +||++++|++|+++++
T Consensus        73 ~~~~~~~~l~l~g~~g-~~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~---~er~~~~~~~G~~l~~  148 (358)
T PLN00411         73 LSVSILSKIGLLGFLG-SMYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSF---KERSSVAKVMGTILSL  148 (358)
T ss_pred             chHHHHHHHHHHHHHH-HHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhh---cccccHHHHHHHHHHH
Confidence            4455556665544433 23333333  999999999999999999999999999      7   8999999999999999


Q ss_pred             HHhheeeecCcc---------------------cccccchHHHHHHHHHHHHHHHHHHHHHHhcc-CCch-hHHHHHHHH
Q psy16816        252 CGLILVTISDVY---------------------MEHLHIPSGSFLSLVSALFYSLYIVFLRRLEH-EEKL-DIVLFYGFV  308 (470)
Q Consensus       252 ~GVvli~~~~~~---------------------~~~~~~~~G~llaL~sAl~~Al~~vl~r~l~~-~~~~-~~~~~~g~v  308 (470)
                      +|++++..+++.                     ....+..+|++++++|+++||+|+++.|+..+ .+.. ....+.+.+
T Consensus       149 ~Gv~ll~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~l~l~aa~~wa~~~il~~~~~~~~~~~~~~t~~~~~~  228 (358)
T PLN00411        149 IGALVVIFYHGPRVFVASSPPYLNFRQLSPPLSSSNSDWLIGGALLTIQGIFVSVSFILQAHIMSEYPAAFTVSFLYTVC  228 (358)
T ss_pred             HHHHHHHHccCcccccccccccccccccccccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHhHHHHHHHHH
Confidence            999987753221                     01122366999999999999999999976644 2222 222222222


Q ss_pred             HHHHHHHHHHHHHHHhhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHhHHHHHHHHHHHHh
Q psy16816        309 GLYNCLLLWPLFFLLHYNSWEVFSLPDRDQWVILLIEGLIGSVLTETLWLWGMLLTSPLIATLGLGLIVPLSMIANTSLY  388 (470)
Q Consensus       309 glf~l~~l~p~~~~l~~~~~e~~~~p~~~~~~~ll~~gil~s~ls~~l~~~ai~~tspl~~tv~~~l~iPla~i~~~l~~  388 (470)
                      +.  +.+..+.. .........+.......+..+++.|+. +.+++.+|++++++.+|..+++...+...++++++++++
T Consensus       229 ~~--~~~~~~~l-~~~~~~~~~~~~~~~~~~~~i~y~~i~-t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~L  304 (358)
T PLN00411        229 VS--IVTSMIGL-VVEKNNPSVWIIHFDITLITIVTMAII-TSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFL  304 (358)
T ss_pred             HH--HHHHHHHH-HHccCCcccceeccchHHHHHHHHHHH-HHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHh
Confidence            22  11111211 111111111211111223447777876 678999999999999999999877655444999999999


Q ss_pred             CCCCCHHHHhHHHHHHHHHHHHHhhhccc
Q psy16816        389 HVTYPRLFYVGAVPVVFAFVASILLAQMA  417 (470)
Q Consensus       389 ge~~s~~~iiG~~lIl~g~~l~~~~~~~~  417 (470)
                      ||++++.+++|+++|++|++++++.+++|
T Consensus       305 gE~lt~~~~iG~~LIl~Gv~l~~~~~~~~  333 (358)
T PLN00411        305 NDSLYLGCLIGGILITLGFYAVMWGKANE  333 (358)
T ss_pred             CCCCcHHHHHHHHHHHHHHHHHHhhhhhh
Confidence            99999999999999999999999876654

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=99.88  E-value=1.2e-20  Score=184.76  Aligned_cols=215  Identities=20%  Similarity=0.256  Sum_probs=164.4

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHH--hhccchHHHHHHHhhHHHHHHHHHHHhcCCCCCccchhhHHHHHHHHHHhheeee
Q psy16816        182 IPQVAKVAFVFSFLRFGAEYTFT--LLGAEAGTVALIYSSSSVLTLLICAFFPSSSSDKFSLSKCVTVCISVCGLILVTI  259 (470)
Q Consensus       182 ~~~~~~l~~~~~~l~~~~n~~~~--L~~tsvs~atiL~stsPvft~lla~lf~~~~~ek~s~~k~igvll~~~GVvli~~  259 (470)
                      .++..+..........+.+.+++  ++|++++.++++.++.|+++++++++++   |||+++++++|++++++|++++..
T Consensus        43 ~~~~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~ii~~~~P~~~~~~~~l~~---~e~~~~~~~~gi~i~~~Gv~li~~  119 (260)
T TIGR00950        43 LKRLLRLLLLGALQIGVFYVLYFVAVKRLPVGEAALLLYLAPLYVTLLSDLMG---KERPRKLVLLAAVLGLAGAVLLLS  119 (260)
T ss_pred             HhHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHhhhHHHHHHHHHHHc---cCCCcHHHHHHHHHHHHhHHhhcc
Confidence            34444444444444455555555  9999999999999999999999999999   999999999999999999999876


Q ss_pred             cCcccccccchHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhcccccccCCCHHHH
Q psy16816        260 SDVYMEHLHIPSGSFLSLVSALFYSLYIVFLRRLEHEEKLDIVLFYGFVGLYNCLLLWPLFFLLHYNSWEVFSLPDRDQW  339 (470)
Q Consensus       260 ~~~~~~~~~~~~G~llaL~sAl~~Al~~vl~r~l~~~~~~~~~~~~g~vglf~l~~l~p~~~~l~~~~~e~~~~p~~~~~  339 (470)
                      ++..   +....|++++++|+++|+.+.+..|+..++.+.+...+..+...++.+++.|....   .+ ++. .++...|
T Consensus       120 ~~~~---~~~~~G~~~~l~a~~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~-~~~-~~~~~~~  191 (260)
T TIGR00950       120 DGNL---SINPAGLLLGLGSGISFALGTVLYKRLVKKEGPELLQFTGWVLLLGALLLLPFAWF---LG-PNP-QALSLQW  191 (260)
T ss_pred             CCcc---cccHHHHHHHHHHHHHHHHHHHHHhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHh---cC-CCC-CcchHHH
Confidence            5422   34578999999999999999999988765322222222212222333444444321   11 111 2245677


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHhHHHHHHHHHHHHhCCCCCHHHHhHHHHHHHHH
Q psy16816        340 VILLIEGLIGSVLTETLWLWGMLLTSPLIATLGLGLIVPLSMIANTSLYHVTYPRLFYVGAVPVVFAF  407 (470)
Q Consensus       340 ~~ll~~gil~s~ls~~l~~~ai~~tspl~~tv~~~l~iPla~i~~~l~~ge~~s~~~iiG~~lIl~g~  407 (470)
                      ..+++.|++++.+++.+|++++++.++..+++...+..+++++++++++||++++.+++|.++++.|+
T Consensus       192 ~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~  259 (260)
T TIGR00950       192 GALLYLGLIGTALAYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAV  259 (260)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence            78899999999999999999999999999998776666669999999999999999999999999986

>KOG4314|consensus

Probab=99.88  E-value=5.5e-23  Score=188.26  Aligned_cols=236  Identities=17%  Similarity=0.275  Sum_probs=210.9

Q ss_pred             ccCCCCChHHHHHHHHHHHHHHHHHHHHHH--hhccchHHHHHHHhhHHHHHHHHHHHhcCCCCCccchhhHHHHHHHHH
Q psy16816        175 IQSTKYNIPQVAKVAFVFSFLRFGAEYTFT--LLGAEAGTVALIYSSSSVLTLLICAFFPSSSSDKFSLSKCVTVCISVC  252 (470)
Q Consensus       175 ~~~~~l~~~~~~~l~~~~~~l~~~~n~~~~--L~~tsvs~atiL~stsPvft~lla~lf~~~~~ek~s~~k~igvll~~~  252 (470)
                      .+++.++.|..++...+|.++|..+||.|.  |+..+++.++.+..++-.|+++++++.+   +||+...|++++++++.
T Consensus        42 Ge~kG~nik~~~~~taPF~i~Wt~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL---~D~~~~~kIlaailAI~  118 (290)
T KOG4314|consen   42 GEDKGFNIKLFFIRTAPFSIFWTGANYLYLLALKKISASDASAIFACNAAFVFILAIIVL---GDRFMGFKILAAILAIG  118 (290)
T ss_pred             ccccCceeeeeeeeecceEEEEecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHh---ccchhhhhHHHHHHHhC
Confidence            345678888899999999999999999999  9999999999999999999999999999   99999999999999999


Q ss_pred             HhheeeecCcccccccchHHHHHHHHHHHHHHHHHHHHHHh-ccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhcccccc
Q psy16816        253 GLILVTISDVYMEHLHIPSGSFLSLVSALFYSLYIVFLRRL-EHEEKLDIVLFYGFVGLYNCLLLWPLFFLLHYNSWEVF  331 (470)
Q Consensus       253 GVvli~~~~~~~~~~~~~~G~llaL~sAl~~Al~~vl~r~l-~~~~~~~~~~~~g~vglf~l~~l~p~~~~l~~~~~e~~  331 (470)
                      |++++++.|...  ...++|+.+++.||...|+|.|+.|+. ++..--+...|++..|.+++.+.|....+++++|+|.+
T Consensus       119 GiVmiay~DN~~--a~e~iGi~~AV~SA~~aAlYKV~FK~~iGnAn~Gdaa~FmS~LGF~NL~~~~~~~lIL~~T~VE~~  196 (290)
T KOG4314|consen  119 GIVMIAYADNEH--ADEIIGIACAVGSAFMAALYKVLFKMFIGNANFGDAAHFMSCLGFFNLCFISFPALILAFTGVEHL  196 (290)
T ss_pred             cEEEEEeccchh--hhhhhhHHHHHHHHHHHHHHHHHHHHHhccCcchhHHHHHHHHHHHHHHHHhhhHHHHHHhchHHH
Confidence            999999988763  567999999999999999999999554 44444478899999999999999988888999999987


Q ss_pred             cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHhHHHHHHHHHHHHhCCCCCHHHHhHHHHHHHHHHHHH
Q psy16816        332 SLPDRDQWVILLIEGLIGSVLTETLWLWGMLLTSPLIATLGLGLIVPLSMIANTSLYHVTYPRLFYVGAVPVVFAFVASI  411 (470)
Q Consensus       332 ~~p~~~~~~~ll~~gil~s~ls~~l~~~ai~~tspl~~tv~~~l~iPla~i~~~l~~ge~~s~~~iiG~~lIl~g~~l~~  411 (470)
                      +......|..++..+.+ +...+++.+.++.++.|+..++++.+.+|.....|.++.+-.++...+.|..+|++|++++.
T Consensus       197 qsFA~~PWG~l~G~A~L-~lAFN~~iN~GiaL~~PilISiG~l~~iP~NaaiDiL~q~l~~ntl~La~T~iI~i~FiLii  275 (290)
T KOG4314|consen  197 QSFAAAPWGCLCGAAGL-SLAFNFLINFGIALLNPILISIGMLCGIPGNAAIDILFQELEFNTLFLAATCIICIGFILII  275 (290)
T ss_pred             HHHhhCCchhhhhHHHH-HHHHhhheeehhhhhchhhheehheecCcchhHHHHHHHHHHHHHHHHHHHHHHHHhHHhee
Confidence            64444567788888877 55568999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhcc
Q psy16816        412 LLAQM  416 (470)
Q Consensus       412 ~~~~~  416 (470)
                      .+..+
T Consensus       276 iP~d~  280 (290)
T KOG4314|consen  276 IPEDK  280 (290)
T ss_pred             cccch
Confidence            88544

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=99.88  E-value=4.5e-20  Score=184.83  Aligned_cols=196  Identities=17%  Similarity=0.190  Sum_probs=153.4

Q ss_pred             h-hccchHHHHHHHhhHHHHHHHHHHHhcCCCCCccchhhHHHHHHHHHHhheeeecCcccccccchHHHHHHHHHHHHH
Q psy16816        205 L-LGAEAGTVALIYSSSSVLTLLICAFFPSSSSDKFSLSKCVTVCISVCGLILVTISDVYMEHLHIPSGSFLSLVSALFY  283 (470)
Q Consensus       205 L-~~tsvs~atiL~stsPvft~lla~lf~~~~~ek~s~~k~igvll~~~GVvli~~~~~~~~~~~~~~G~llaL~sAl~~  283 (470)
                      + ++++++.++++.++.|+|+.+++++ +   |||+++++++|++++++|+.++..++..   +....|++++++|+++|
T Consensus        90 ~~~~~~a~~a~~l~~~~Pl~~~lla~~-~---~e~~~~~~~~~~~la~~Gv~ll~~~~~~---~~~~~G~l~~l~a~~~~  162 (292)
T PRK11272         90 EHQNVPSGIAAVVVATVPLFTLCFSRL-F---GIRTRKLEWLGIAIGLAGIVLLNSGGNL---SGNPWGAILILIASASW  162 (292)
T ss_pred             HHccCcHHHHHHHHHHHHHHHHHHHHH-h---cccCchhHHHHHHHHHHhHHHHhcCccc---ccchHHHHHHHHHHHHH
Confidence            6 9999999999999999999999985 6   8999999999999999999988654322   23467999999999999


Q ss_pred             HHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhcccccc-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy16816        284 SLYIVFLRRLEHEEKLDIVLFYGFVGLYNCLLLWPLFFLLHYNSWEVF-SLPDRDQWVILLIEGLIGSVLTETLWLWGML  362 (470)
Q Consensus       284 Al~~vl~r~l~~~~~~~~~~~~g~vglf~l~~l~p~~~~l~~~~~e~~-~~p~~~~~~~ll~~gil~s~ls~~l~~~ai~  362 (470)
                      |.|.+..|+..+.+......+...++   .+.+.+....   .+ +++ ..++...|..+++.|++++++++.+|+++++
T Consensus       163 a~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~---~~-~~~~~~~~~~~~~~i~~l~i~~s~~~~~l~~~~~~  235 (292)
T PRK11272        163 AFGSVWSSRLPLPVGMMAGAAEMLAA---GVVLLIASLL---SG-ERLTALPTLSGFLALGYLAVFGSIIAISAYMYLLR  235 (292)
T ss_pred             HHHHHHHHhcCCCcchHHHHHHHHHH---HHHHHHHHHH---cC-CcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            99999998876533322222221222   2222222211   11 122 2245578889999999999999999999999


Q ss_pred             hhchhHHHHHHHhHHHHHHHHHHHHhCCCCCHHHHhHHHHHHHHHHHHHhhh
Q psy16816        363 LTSPLIATLGLGLIVPLSMIANTSLYHVTYPRLFYVGAVPVVFAFVASILLA  414 (470)
Q Consensus       363 ~tspl~~tv~~~l~iPla~i~~~l~~ge~~s~~~iiG~~lIl~g~~l~~~~~  414 (470)
                      +.++..+++...+..+++++++++++||++++.+++|+++|+.|+++.++.+
T Consensus       236 ~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~~~  287 (292)
T PRK11272        236 NVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTLGK  287 (292)
T ss_pred             hcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999887655545599999999999999999999999999999988653

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=99.88  E-value=4.4e-20  Score=185.50  Aligned_cols=204  Identities=12%  Similarity=0.183  Sum_probs=153.9

Q ss_pred             hhc-cchHHHHHHHhhHHHHHHHHHHHhcCCCCCccchhhHHHHHHHHHHhheeeecCcccccccchHHHHHHHHHHHHH
Q psy16816        205 LLG-AEAGTVALIYSSSSVLTLLICAFFPSSSSDKFSLSKCVTVCISVCGLILVTISDVYMEHLHIPSGSFLSLVSALFY  283 (470)
Q Consensus       205 L~~-tsvs~atiL~stsPvft~lla~lf~~~~~ek~s~~k~igvll~~~GVvli~~~~~~~~~~~~~~G~llaL~sAl~~  283 (470)
                      ++| .+++.++++.+++|+|+.+++++++   |||++.+++++++++++|+.++..++.... .....|++++++++++|
T Consensus        80 ~~~~~~a~~a~~l~~~~pi~~~ll~~~~l---~e~~~~~~~~~~~l~~~Gv~ll~~~~~~~~-~~~~~G~~l~l~aal~~  155 (299)
T PRK11453         80 INFGMPAGLASLVLQAQAFFTIVLGAFTF---GERLQGKQLAGIALAIFGVLVLIEDSLNGQ-HVAMLGFMLTLAAAFSW  155 (299)
T ss_pred             HHhcCCHHHHHHHHHhHHHHHHHHHHHHh---cCcCcHHHHHHHHHHHHhHHHhccccCCCc-chhHHHHHHHHHHHHHH
Confidence            777 5889999999999999999999999   999999999999999999999986543221 23457999999999999


Q ss_pred             HHHHHHHHHhccC-CchhHHHHHHHHHHHHHHHHHHHHHHHhhccc---ccccCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q psy16816        284 SLYIVFLRRLEHE-EKLDIVLFYGFVGLYNCLLLWPLFFLLHYNSW---EVFSLPDRDQWVILLIEGLIGSVLTETLWLW  359 (470)
Q Consensus       284 Al~~vl~r~l~~~-~~~~~~~~~g~vglf~l~~l~p~~~~l~~~~~---e~~~~p~~~~~~~ll~~gil~s~ls~~l~~~  359 (470)
                      |+|.++.|+..+. +......+..+..+...+.+....... ..+.   +++...+...|..++++|++++++++++|++
T Consensus       156 a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~l~i~~t~~~~~l~~~  234 (299)
T PRK11453        156 ACGNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLIL-DGSATMIHSLVTIDMTTILSLMYLAFVATIVGYGIWGT  234 (299)
T ss_pred             HHHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHh-cCchhhhhhhccCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999876542 222222211122221111111111111 0000   1122334578999999999999999999999


Q ss_pred             HHHhhchhHHHHHHHhHHHH-HHHHHHHHhCCCCCHHHHhHHHHHHHHHHHHHhhh
Q psy16816        360 GMLLTSPLIATLGLGLIVPL-SMIANTSLYHVTYPRLFYVGAVPVVFAFVASILLA  414 (470)
Q Consensus       360 ai~~tspl~~tv~~~l~iPl-a~i~~~l~~ge~~s~~~iiG~~lIl~g~~l~~~~~  414 (470)
                      ++++.++..++.... ..|+ +++++++++||++++.+++|+++|+.|+++..+++
T Consensus       235 ~l~~~~a~~~s~~~~-l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~~~  289 (299)
T PRK11453        235 LLGRYETWRVAPLSL-LVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVFGL  289 (299)
T ss_pred             HHHhCCHHHHHHHHH-HHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhcch
Confidence            999999988887554 5566 99999999999999999999999999999988764

>PRK11689 aromatic amino acid exporter; Provisional

Probab=99.87  E-value=5.9e-20  Score=184.31  Aligned_cols=195  Identities=17%  Similarity=0.206  Sum_probs=150.3

Q ss_pred             hccchHHHHHHHhhHHHHHHHHHHHhcCCCCCccchhhHHHHHHHHHHhheeeecCcccc-------cccchHHHHHHHH
Q psy16816        206 LGAEAGTVALIYSSSSVLTLLICAFFPSSSSDKFSLSKCVTVCISVCGLILVTISDVYME-------HLHIPSGSFLSLV  278 (470)
Q Consensus       206 ~~tsvs~atiL~stsPvft~lla~lf~~~~~ek~s~~k~igvll~~~GVvli~~~~~~~~-------~~~~~~G~llaL~  278 (470)
                      ++++++.++++.++.|+|+.+++++++   |||+++++++|++++++|++++..++...+       ......|++++++
T Consensus        87 ~~~~a~~a~~l~~~~Pi~~~ll~~~~~---~e~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~G~~~~l~  163 (295)
T PRK11689         87 TRRQAIEVGMVNYLWPSLTILFAVLFN---GQKANWLLIPGLLLALAGVAWVLGGDNGLSLAELINNIASNPLSYGLAFI  163 (295)
T ss_pred             ccccchHHHHHHHHhHHHHHHHHHHHh---cCCccHHHHHHHHHHHHhHhheecCCccchhhhhhhccccChHHHHHHHH
Confidence            457888999999999999999999999   999999999999999999999987653211       0123579999999


Q ss_pred             HHHHHHHHHHHHHHhccC-CchhHHHHHHHHHHHHHHHHHHHHHHHhhcccccccCCCHHHHHHHHHHHHHHHHHHHHHH
Q psy16816        279 SALFYSLYIVFLRRLEHE-EKLDIVLFYGFVGLYNCLLLWPLFFLLHYNSWEVFSLPDRDQWVILLIEGLIGSVLTETLW  357 (470)
Q Consensus       279 sAl~~Al~~vl~r~l~~~-~~~~~~~~~g~vglf~l~~l~p~~~~l~~~~~e~~~~p~~~~~~~ll~~gil~s~ls~~l~  357 (470)
                      |+++||+|.++.|+..++ +...  .++...+    +++++....   .+ ++....+...|..+++.|+ ++.+++++|
T Consensus       164 aa~~~A~~~v~~k~~~~~~~~~~--~~~~~~~----~~l~~~~~~---~~-~~~~~~~~~~~~~l~~~~~-~t~~~~~l~  232 (295)
T PRK11689        164 GAFIWAAYCNVTRKYARGKNGIT--LFFILTA----LALWIKYFL---SP-QPAMVFSLPAIIKLLLAAA-AMGFGYAAW  232 (295)
T ss_pred             HHHHHHHHHHHHhhccCCCCchh--HHHHHHH----HHHHHHHHH---hc-CccccCCHHHHHHHHHHHH-HHHHHHHHH
Confidence            999999999999887653 2222  2221111    122222211   11 1112234467888888885 689999999


Q ss_pred             HHHHHhhchhHHHHHHHhHHHHHHHHHHHHhCCCCCHHHHhHHHHHHHHHHHHHhhh
Q psy16816        358 LWGMLLTSPLIATLGLGLIVPLSMIANTSLYHVTYPRLFYVGAVPVVFAFVASILLA  414 (470)
Q Consensus       358 ~~ai~~tspl~~tv~~~l~iPla~i~~~l~~ge~~s~~~iiG~~lIl~g~~l~~~~~  414 (470)
                      ++++++.+|..++...++..+++++++++++||++++.+++|+++|+.|+++..+..
T Consensus       233 ~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~~~~  289 (295)
T PRK11689        233 NVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCWLAT  289 (295)
T ss_pred             HHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHhhhH
Confidence            999999999999887766655599999999999999999999999999998887553

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=99.87  E-value=1.8e-20  Score=188.38  Aligned_cols=229  Identities=13%  Similarity=0.161  Sum_probs=157.2

Q ss_pred             CCCChHHHHHHHHHHHHHHHHHHHHHH--hhccchHHHHHHHhhHHHHHHHHHHHhcCCCCCccchhhHHHHHHHHHHhh
Q psy16816        178 TKYNIPQVAKVAFVFSFLRFGAEYTFT--LLGAEAGTVALIYSSSSVLTLLICAFFPSSSSDKFSLSKCVTVCISVCGLI  255 (470)
Q Consensus       178 ~~l~~~~~~~l~~~~~~l~~~~n~~~~--L~~tsvs~atiL~stsPvft~lla~lf~~~~~ek~s~~k~igvll~~~GVv  255 (470)
                      .+++.++. +..+..+++..+...+.+  ++|++++.++++.+++|+|+.+++++++   +||++++++++++++++|++
T Consensus        58 ~~~~~~~~-~~~~~~g~~~~~~~~~~~~~l~~~s~s~~~li~~~~Pv~~~ll~~~~~---~e~~~~~~~~~l~l~~~Gv~  133 (302)
T TIGR00817        58 LKISSALL-KLLLPVAIVHTIGHVTSNVSLSKVAVSFTHTIKAMEPFFSVVLSAFFL---GQEFPSTLWLSLLPIVGGVA  133 (302)
T ss_pred             CCCCHHHH-HHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHhcchHHHHHHHHHHh---CCCCcHHHHHHHHHHHHHHh
Confidence            34555544 344444444444444444  9999999999999999999999999999   99999999999999999998


Q ss_pred             eeeecCcccccccchHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccccc--c-c
Q psy16816        256 LVTISDVYMEHLHIPSGSFLSLVSALFYSLYIVFLRRLEHEEKLDIVLFYGFVGLYNCLLLWPLFFLLHYNSWEV--F-S  332 (470)
Q Consensus       256 li~~~~~~~~~~~~~~G~llaL~sAl~~Al~~vl~r~l~~~~~~~~~~~~g~vglf~l~~l~p~~~~l~~~~~e~--~-~  332 (470)
                      +....+.    +....|++++++|+++||+|.+..|+..++++.+......+...++.+++.|.....+..+..+  + .
T Consensus       134 l~~~~~~----~~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~  209 (302)
T TIGR00817       134 LASDTEL----SFNWAGFLSAMISNITFVSRNIFSKKAMTIKSLDKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQ  209 (302)
T ss_pred             hhcCCcc----cccHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHH
Confidence            7754332    2346799999999999999999997765422333222222233334444555543322111000  0 0


Q ss_pred             ----CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHhHHHHHHHHHHHHhCCCCCHHHHhHHHHHHHHHH
Q psy16816        333 ----LPDRDQWVILLIEGLIGSVLTETLWLWGMLLTSPLIATLGLGLIVPLSMIANTSLYHVTYPRLFYVGAVPVVFAFV  408 (470)
Q Consensus       333 ----~p~~~~~~~ll~~gil~s~ls~~l~~~ai~~tspl~~tv~~~l~iPla~i~~~l~~ge~~s~~~iiG~~lIl~g~~  408 (470)
                          ......+...+..++.+..+.+.++++++++++|..+++...+...++++++++++||++++.+++|++++++|++
T Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~  289 (302)
T TIGR00817       210 AISGVNVTKIYTVSLVAAMGFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVF  289 (302)
T ss_pred             hhcccCchHHHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHH
Confidence                0111122223333333333344566789999999999987554433488999999999999999999999999999


Q ss_pred             HHHhhh
Q psy16816        409 ASILLA  414 (470)
Q Consensus       409 l~~~~~  414 (470)
                      ++++.+
T Consensus       290 l~~~~k  295 (302)
T TIGR00817       290 LYSRVK  295 (302)
T ss_pred             HHHHHh
Confidence            999664

specificities overlap.

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=99.85  E-value=3.3e-19  Score=183.19  Aligned_cols=224  Identities=13%  Similarity=0.156  Sum_probs=165.4

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHH--hhccchHHHHHHHhhHHHHHHHHHHHhcCCCCCccchhhHHHHHHHHHHhheeee
Q psy16816        182 IPQVAKVAFVFSFLRFGAEYTFT--LLGAEAGTVALIYSSSSVLTLLICAFFPSSSSDKFSLSKCVTVCISVCGLILVTI  259 (470)
Q Consensus       182 ~~~~~~l~~~~~~l~~~~n~~~~--L~~tsvs~atiL~stsPvft~lla~lf~~~~~ek~s~~k~igvll~~~GVvli~~  259 (470)
                      .++.++..++.+++.+..++..+  +++++++.++++.+++|+|+++++++++   +||++++++++++++++|+++.+.
T Consensus       110 ~~~~~~~llp~gl~~~~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l---~ek~s~~~~l~l~l~v~Gv~l~~~  186 (350)
T PTZ00343        110 LKLFLKNFLPQGLCHLFVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFL---KQFLNLYAYLSLIPIVGGVALASV  186 (350)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHh---CCCccHHHHHHHHHHHHHHHheec
Confidence            44455555555555544444433  9999999999999999999999999999   999999999999999999999987


Q ss_pred             cCcccccccchHHHHHHHHHHHHHHHHHHHHHHhcc-CC----chhHHHHHHHHHHHHHHHHHHHHHHHhhccccc-c--
Q psy16816        260 SDVYMEHLHIPSGSFLSLVSALFYSLYIVFLRRLEH-EE----KLDIVLFYGFVGLYNCLLLWPLFFLLHYNSWEV-F--  331 (470)
Q Consensus       260 ~~~~~~~~~~~~G~llaL~sAl~~Al~~vl~r~l~~-~~----~~~~~~~~g~vglf~l~~l~p~~~~l~~~~~e~-~--  331 (470)
                      .+.+    .++.|++++++|+++||+|.++.|+..+ .+    +.+....+.+..+++.+++.|.....+...... +  
T Consensus       187 ~~~~----~~~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~~~~~~~~  262 (350)
T PTZ00343        187 KELH----FTWLAFWCAMLSNLGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGKKWVPVWTN  262 (350)
T ss_pred             ccch----hHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence            5543    2478999999999999999999966543 22    244443344444555566666654332111000 1  


Q ss_pred             --cCCCHHHHHHHHHHHHHHHHHHHHHHHH----HHHhhchhHHHHHHHhHHHHHHHHHHHHhCCCCCHHHHhHHHHHHH
Q psy16816        332 --SLPDRDQWVILLIEGLIGSVLTETLWLW----GMLLTSPLIATLGLGLIVPLSMIANTSLYHVTYPRLFYVGAVPVVF  405 (470)
Q Consensus       332 --~~p~~~~~~~ll~~gil~s~ls~~l~~~----ai~~tspl~~tv~~~l~iPla~i~~~l~~ge~~s~~~iiG~~lIl~  405 (470)
                        .......+..+++. ++.+.+.+++|+.    ++++++|+..++...+..+++++++++++||++++.+++|++++++
T Consensus       263 ~~~~~~~~~~~~~l~~-i~~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~lii~  341 (350)
T PTZ00343        263 YTANMTNYTKGIIIFK-IFFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVAIL  341 (350)
T ss_pred             hhhcccccchHHHHHH-HHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHHHH
Confidence              00011112233443 4447788889884    9999999999998877766699999999999999999999999999


Q ss_pred             HHHHHHhh
Q psy16816        406 AFVASILL  413 (470)
Q Consensus       406 g~~l~~~~  413 (470)
                      |++++++-
T Consensus       342 Gv~lYs~~  349 (350)
T PTZ00343        342 GALLYSLF  349 (350)
T ss_pred             HHHHHhhc
Confidence            99999853

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=99.83  E-value=6.2e-18  Score=169.51  Aligned_cols=200  Identities=16%  Similarity=0.128  Sum_probs=148.7

Q ss_pred             HHHHHHHHH--hhccchHHHHHHHhhHHHHHHHHHHHhcCCCCCccchhhHHHHHHHHHHhheeeecCcccccccchHHH
Q psy16816        196 RFGAEYTFT--LLGAEAGTVALIYSSSSVLTLLICAFFPSSSSDKFSLSKCVTVCISVCGLILVTISDVYMEHLHIPSGS  273 (470)
Q Consensus       196 ~~~~n~~~~--L~~tsvs~atiL~stsPvft~lla~lf~~~~~ek~s~~k~igvll~~~GVvli~~~~~~~~~~~~~~G~  273 (470)
                      .+..+++++  ++|++++.++++.+++|+|+.+++       +||+.  ++.++.++++|+.++..++.+.. +....|+
T Consensus        81 ~~~~~~~~~~al~~~~~~~a~~l~~t~Pi~~~ll~-------~~~~~--~~~~~~i~~~Gv~li~~~~~~~~-~~~~~G~  150 (293)
T PRK10532         81 LGGMNYLFYLSIQTVPLGIAVALEFTGPLAVALFS-------SRRPV--DFVWVVLAVLGLWFLLPLGQDVS-HVDLTGA  150 (293)
T ss_pred             HHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHh-------cCChH--HHHHHHHHHHHHheeeecCCCcc-cCChHHH
Confidence            344455544  999999999999999999998765       34443  45667889999999875443222 3356799


Q ss_pred             HHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhcccccccCCCHHHHHHHHHHHHHHHHHH
Q psy16816        274 FLSLVSALFYSLYIVFLRRLEHEEKLDIVLFYGFVGLYNCLLLWPLFFLLHYNSWEVFSLPDRDQWVILLIEGLIGSVLT  353 (470)
Q Consensus       274 llaL~sAl~~Al~~vl~r~l~~~~~~~~~~~~g~vglf~l~~l~p~~~~l~~~~~e~~~~p~~~~~~~ll~~gil~s~ls  353 (470)
                      +++++++++||.|.+..|+..++.+.....+.   ..+..+++.|....   .+  +....+...|..++++|+++++++
T Consensus       151 ll~l~aa~~~a~~~v~~r~~~~~~~~~~~~~~---~~~~~~~l~~~~~~---~~--~~~~~~~~~~~~~l~lgv~~t~~~  222 (293)
T PRK10532        151 ALALGAGACWAIYILSGQRAGAEHGPATVAIG---SLIAALIFVPIGAL---QA--GEALWHWSILPLGLAVAILSTALP  222 (293)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhccCCchHHHHH---HHHHHHHHHHHHHH---cc--CcccCCHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999887653222222222   22333334443321   11  111123456667789999999999


Q ss_pred             HHHHHHHHHhhchhHHHHHHHhHHHHHHHHHHHHhCCCCCHHHHhHHHHHHHHHHHHHhh
Q psy16816        354 ETLWLWGMLLTSPLIATLGLGLIVPLSMIANTSLYHVTYPRLFYVGAVPVVFAFVASILL  413 (470)
Q Consensus       354 ~~l~~~ai~~tspl~~tv~~~l~iPla~i~~~l~~ge~~s~~~iiG~~lIl~g~~l~~~~  413 (470)
                      +.+|++++++.+|..++....++.+++++++++++||++++.+++|+++|+.|.+...+.
T Consensus       223 ~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~~  282 (293)
T PRK10532        223 YSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTLT  282 (293)
T ss_pred             HHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhc
Confidence            999999999999999998877776669999999999999999999999999999999755

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=99.83  E-value=3e-18  Score=172.03  Aligned_cols=202  Identities=11%  Similarity=0.099  Sum_probs=145.5

Q ss_pred             HHHHHHHH--hhccchHHHHHHHhhHHHHHHHHHHHhcCCCCCccchhhHHHHHHHHHHhheeeecCcccccccchHHHH
Q psy16816        197 FGAEYTFT--LLGAEAGTVALIYSSSSVLTLLICAFFPSSSSDKFSLSKCVTVCISVCGLILVTISDVYMEHLHIPSGSF  274 (470)
Q Consensus       197 ~~~n~~~~--L~~tsvs~atiL~stsPvft~lla~lf~~~~~ek~s~~k~igvll~~~GVvli~~~~~~~~~~~~~~G~l  274 (470)
                      +..+.+|+  +++++++.++++.++.|+|+.+++++++   +||+++++++|++++++|++++..+++.    .    .+
T Consensus        84 ~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l---~E~~~~~~~~g~~l~~~Gv~li~~~~~~----~----~~  152 (296)
T PRK15430         84 GGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFL---GERFRRMQWLAVILAICGVLVQLWTFGS----L----PI  152 (296)
T ss_pred             HHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHh---cCCCcHHHHHHHHHHHHHHHHHHHHcCC----c----cH
Confidence            33444444  9999999999999999999999999999   9999999999999999999998754321    1    25


Q ss_pred             HHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhcccccccCCCHHHHHHHHHHHHHHHHHHH
Q psy16816        275 LSLVSALFYSLYIVFLRRLEHEEKLDIVLFYGFVGLYNCLLLWPLFFLLHYNSWEVFSLPDRDQWVILLIEGLIGSVLTE  354 (470)
Q Consensus       275 laL~sAl~~Al~~vl~r~l~~~~~~~~~~~~g~vglf~l~~l~p~~~~l~~~~~e~~~~p~~~~~~~ll~~gil~s~ls~  354 (470)
                      ++++++++||.|.+..|+..+++.........+...+......    .....+...+...+...+..+++.|+ ++.+++
T Consensus       153 ~~l~aa~~~a~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~g~-~t~i~~  227 (296)
T PRK15430        153 IALGLAFSFAFYGLVRKKIAVEAQTGMLIETMWLLPVAAIYLF----AIADSSTSHMGQNPMSLNLLLIAAGI-VTTVPL  227 (296)
T ss_pred             HHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHH----HHccCCcccccCCcHHHHHHHHHHHH-HHHHHH
Confidence            6889999999999999877542222211111111111111111    11111111111112223444555565 477999


Q ss_pred             HHHHHHHHhhchhHHHHHHHhHHHHHHHHHHHHhCCCCCHHHHhHHHHHHHHHHHHHhhh
Q psy16816        355 TLWLWGMLLTSPLIATLGLGLIVPLSMIANTSLYHVTYPRLFYVGAVPVVFAFVASILLA  414 (470)
Q Consensus       355 ~l~~~ai~~tspl~~tv~~~l~iPla~i~~~l~~ge~~s~~~iiG~~lIl~g~~l~~~~~  414 (470)
                      .+|++++++.+|..++...++..+++++++++++||++++.+++|+++|++|+.++....
T Consensus       228 ~~~~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~~~v~~~~~  287 (296)
T PRK15430        228 LCFTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIFVMDA  287 (296)
T ss_pred             HHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999987766666699999999999999999999999999988887654

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=99.79  E-value=4.7e-18  Score=169.24  Aligned_cols=214  Identities=14%  Similarity=0.126  Sum_probs=152.2

Q ss_pred             HHHHHHHHHHHHHHHHHHH--hhccchHHHHHHHhhHHHHHHHHHHHhcCCCCCccchhhHHHHHHHHHHhheeeecCcc
Q psy16816        186 AKVAFVFSFLRFGAEYTFT--LLGAEAGTVALIYSSSSVLTLLICAFFPSSSSDKFSLSKCVTVCISVCGLILVTISDVY  263 (470)
Q Consensus       186 ~~l~~~~~~l~~~~n~~~~--L~~tsvs~atiL~stsPvft~lla~lf~~~~~ek~s~~k~igvll~~~GVvli~~~~~~  263 (470)
                      ....+..+.......+++.  +++++++.++.+.++.|+++.+++++++   +||+++++++|++++++|++++..++..
T Consensus        63 ~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~---~e~~~~~~~~g~~~~~~Gv~ll~~~~~~  139 (281)
T TIGR03340        63 WLLLAISAVANMVYFLGLAQAYHHADVGLVYPLARSSPLLVAIWATLTL---GETLSPLAWLGILIITLGLLVLGLSRFA  139 (281)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHhccccc
Confidence            3333333333444444444  9999999999999999999999999999   9999999999999999999988765433


Q ss_pred             cccccchHHHHHHHHHHHHHHHHHHHHHHhccC-Cc-hhHHHHHHHHHHHHHHHHHHHHHHHhhcccccccCCCHHHHHH
Q psy16816        264 MEHLHIPSGSFLSLVSALFYSLYIVFLRRLEHE-EK-LDIVLFYGFVGLYNCLLLWPLFFLLHYNSWEVFSLPDRDQWVI  341 (470)
Q Consensus       264 ~~~~~~~~G~llaL~sAl~~Al~~vl~r~l~~~-~~-~~~~~~~g~vglf~l~~l~p~~~~l~~~~~e~~~~p~~~~~~~  341 (470)
                         .....|++++++++++||+|.++.|+..++ ++ .....+.. .+..  +...|........+..+.. +....+..
T Consensus       140 ---~~~~~g~~~~l~aal~~a~~~i~~k~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~-~~~~~~~~  212 (281)
T TIGR03340       140 ---QHRRKAYAWALAAALGTAIYSLSDKAAALGVPAFYSALGYLG-IGFL--AMGWPFLLLYLKRHGRSMF-PYARQILP  212 (281)
T ss_pred             ---ccchhHHHHHHHHHHHHHHhhhhccccccchhcccccHHHHH-HHHH--HHHHHHHHHHHHHhccchh-hhHHHHHH
Confidence               233568889999999999999988776432 11 11111111 1111  0001221111111111111 12234556


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHhHHHHHHHHHHHHhCCCCCHHHHhHHHHHHHHHHH
Q psy16816        342 LLIEGLIGSVLTETLWLWGMLLTSPLIATLGLGLIVPLSMIANTSLYHVTYPRLFYVGAVPVVFAFVA  409 (470)
Q Consensus       342 ll~~gil~s~ls~~l~~~ai~~tspl~~tv~~~l~iPla~i~~~l~~ge~~s~~~iiG~~lIl~g~~l  409 (470)
                      +++.+.+++.+++.+|++++++.++..++...++..+++.+++++++||++++.+++|+++|++|+++
T Consensus       213 ~~~~~~~~s~l~~~l~~~al~~~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l  280 (281)
T TIGR03340       213 SATLGGLMIGGAYALVLWAMTRLPVATVVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV  280 (281)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhCCceEEEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence            67777788999999999999999988777666666555999999999999999999999999999875

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=99.78  E-value=1.5e-16  Score=156.64  Aligned_cols=207  Identities=20%  Similarity=0.257  Sum_probs=158.1

Q ss_pred             HHHHHHHHHH--hhccchHHHHHHHhhHHHHHHHHHH-HhcCCCCCccchhhHHHHHHHHHHhheeeecCcccccccchH
Q psy16816        195 LRFGAEYTFT--LLGAEAGTVALIYSSSSVLTLLICA-FFPSSSSDKFSLSKCVTVCISVCGLILVTISDVYMEHLHIPS  271 (470)
Q Consensus       195 l~~~~n~~~~--L~~tsvs~atiL~stsPvft~lla~-lf~~~~~ek~s~~k~igvll~~~GVvli~~~~~~~~~~~~~~  271 (470)
                      ......+.|+  +++++++.++++.++.|+++.++++ +++   +||++++++++++++++|++++..++...... ...
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~---~e~~~~~~~~~~~~~~~Gv~lv~~~~~~~~~~-~~~  154 (292)
T COG0697          79 GLALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLL---GERLSLLQILGILLALAGVLLILLGGGGGGIL-SLL  154 (292)
T ss_pred             HHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHc---cCCCcHHHHHHHHHHHHhHHheecCCCcchhH-HHH
Confidence            3333444444  9999999999999999999999996 888   99999999999999999999999988764312 478


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhcccccccCCCHHHHHHHHHHHHHHHH
Q psy16816        272 GSFLSLVSALFYSLYIVFLRRLEHEEKLDIVLFYGFVGLYNCLLLWPLFFLLHYNSWEVFSLPDRDQWVILLIEGLIGSV  351 (470)
Q Consensus       272 G~llaL~sAl~~Al~~vl~r~l~~~~~~~~~~~~g~vglf~l~~l~p~~~~l~~~~~e~~~~p~~~~~~~ll~~gil~s~  351 (470)
                      |+++++++++++|++.+..|++.+.+......+  +.......+..+..    .. ..+ .......|..+++.|++++.
T Consensus       155 g~~~~l~a~~~~a~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~----~~-~~~-~~~~~~~~~~~~~~g~~~~~  226 (292)
T COG0697         155 GLLLALAAALLWALYTALVKRLSRLGPVTLALL--LQLLLALLLLLLFF----LS-GFG-APILSRAWLLLLYLGVFSTG  226 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHH--HHHHHHHHHHHHHH----hc-ccc-ccCCHHHHHHHHHHHHHHHH
Confidence            999999999999999999987762222222221  11111111111111    11 111 12234678889999999888


Q ss_pred             HHHHHHHHHHHhhchhHHHHHHHhHHHHHHHHHHHHhCCCCCHHHHhHHHHHHHHHHHHHhh
Q psy16816        352 LTETLWLWGMLLTSPLIATLGLGLIVPLSMIANTSLYHVTYPRLFYVGAVPVVFAFVASILL  413 (470)
Q Consensus       352 ls~~l~~~ai~~tspl~~tv~~~l~iPla~i~~~l~~ge~~s~~~iiG~~lIl~g~~l~~~~  413 (470)
                      +++++|++++++.++..++......++++++++++++||+++..+++|.++++.|.++.+..
T Consensus       227 i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~~~  288 (292)
T COG0697         227 LAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASLR  288 (292)
T ss_pred             HHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcc
Confidence            99999999999999999887665454448888999999999999999999999999999865

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=99.75  E-value=4.1e-16  Score=157.10  Aligned_cols=229  Identities=20%  Similarity=0.229  Sum_probs=173.6

Q ss_pred             CCCCChHHHHHHHHHHHHHHHHHHHHHH--hhccchHHHHHHHhhHHHHHHHHHHHhcCCCCCccchhhHHHHHHHHHHh
Q psy16816        177 STKYNIPQVAKVAFVFSFLRFGAEYTFT--LLGAEAGTVALIYSSSSVLTLLICAFFPSSSSDKFSLSKCVTVCISVCGL  254 (470)
Q Consensus       177 ~~~l~~~~~~~l~~~~~~l~~~~n~~~~--L~~tsvs~atiL~stsPvft~lla~lf~~~~~ek~s~~k~igvll~~~GV  254 (470)
                      .++.+.++++..+    .+++++.++-+  ++|+|.+..+++.++.|+++++++.+++   ++|.+.++++++++..+|+
T Consensus        59 ~~~~~~~~~~~~~----~~~~~~~~~~~~al~~i~~p~~~~~ks~~~i~vmi~~~l~~---~k~y~~~~~~~v~li~~Gv  131 (303)
T PF08449_consen   59 SRKIPLKKYAILS----FLFFLASVLSNAALKYISYPTQIVFKSSKPIPVMILGVLIL---GKRYSRRQYLSVLLITIGV  131 (303)
T ss_pred             CCcChHHHHHHHH----HHHHHHHHHHHHHHHhCChHHHHHHhhhHHHHHHHHHHHhc---CccccHHHHHHHHHHHhhH
Confidence            4445556665554    44455556655  9999999999999999999999999999   9999999999999999999


Q ss_pred             heeeecCcccccc------cchHHHHHHHHHHHHHHHHHHHHHHhc-cCC--chhHHHHHHHHHHHHHHHHHHHHHHH--
Q psy16816        255 ILVTISDVYMEHL------HIPSGSFLSLVSALFYSLYIVFLRRLE-HEE--KLDIVLFYGFVGLYNCLLLWPLFFLL--  323 (470)
Q Consensus       255 vli~~~~~~~~~~------~~~~G~llaL~sAl~~Al~~vl~r~l~-~~~--~~~~~~~~g~vglf~l~~l~p~~~~l--  323 (470)
                      ++....+......      ....|+++.+++.++.|+..+.+++.- +.+  ..+...+.   .++++++.++....+  
T Consensus       132 ~~~~~~~~~~~~~~~~~~~~~~~G~~ll~~sl~~~a~~~~~qe~~~~~~~~~~~~~mfy~---n~~~~~~~~~~~~~l~~  208 (303)
T PF08449_consen  132 AIFTLSDSSSSSSSNSSSFSSALGIILLLLSLLLDAFTGVYQEKLFKKYGKSPWELMFYT---NLFSLPFLLILLFLLPT  208 (303)
T ss_pred             heeeecccccccccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHH---HHHHHHHHHHHHHHHHh
Confidence            9999887643311      123499999999999999999994443 322  22333333   334444444333331  


Q ss_pred             -hhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHhHHHHHHHHHHHHhCCCCCHHHHhHHHH
Q psy16816        324 -HYNSWEVFSLPDRDQWVILLIEGLIGSVLTETLWLWGMLLTSPLIATLGLGLIVPLSMIANTSLYHVTYPRLFYVGAVP  402 (470)
Q Consensus       324 -~~~~~e~~~~p~~~~~~~ll~~gil~s~ls~~l~~~ai~~tspl~~tv~~~l~iPla~i~~~l~~ge~~s~~~iiG~~l  402 (470)
                       +..+..++....+..+..++.+++. ..+++.++++.+++.+|++.++...+..+++++++++++|+++++.+|+|.++
T Consensus       209 ~~~~~~~~f~~~~p~~~~~l~~~s~~-~~~g~~~i~~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~l  287 (303)
T PF08449_consen  209 GEFRSAIRFISAHPSVLLYLLLFSLT-GALGQFFIFYLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVL  287 (303)
T ss_pred             hHhhHHHHHHHHhHHHHHHHHHHHHH-HHHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHH
Confidence             1211222323344566777777775 67778888999999999999999989999999999999999999999999999


Q ss_pred             HHHHHHHHHhhhcc
Q psy16816        403 VVFAFVASILLAQM  416 (470)
Q Consensus       403 Il~g~~l~~~~~~~  416 (470)
                      ++.|..++++.+++
T Consensus       288 v~~g~~~~~~~~~k  301 (303)
T PF08449_consen  288 VFAGIFLYSYAKKK  301 (303)
T ss_pred             hHHHHHHHHHhhcc
Confidence            99999999988655

; GO: 0055085 transmembrane transport

>KOG4510|consensus

Probab=99.70  E-value=2.1e-17  Score=158.02  Aligned_cols=209  Identities=16%  Similarity=0.163  Sum_probs=169.0

Q ss_pred             HHHHHHHHH-hhccchHHHHHHHhhHHHHHHHHHHHhcCCCCCccchhhHHHHHHHHHHhheeeecCcccc---------
Q psy16816        196 RFGAEYTFT-LLGAEAGTVALIYSSSSVLTLLICAFFPSSSSDKFSLSKCVTVCISVCGLILVTISDVYME---------  265 (470)
Q Consensus       196 ~~~~n~~~~-L~~tsvs~atiL~stsPvft~lla~lf~~~~~ek~s~~k~igvll~~~GVvli~~~~~~~~---------  265 (470)
                      ++.....|+ +.|+|.++++++..++|+||.+++|+++   ||++++...++.++++.||+++..|..-..         
T Consensus       108 ~tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~L---kE~~t~~eaL~s~itl~GVVLIvRPpFlFG~~t~g~~~s  184 (346)
T KOG4510|consen  108 FTGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFL---KEPFTKFEALGSLITLLGVVLIVRPPFLFGDTTEGEDSS  184 (346)
T ss_pred             hhHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHH---cCCCcHHHHHHHHHhhheEEEEecCCcccCCCccccccc
Confidence            333445555 9999999999999999999999999999   999999999999999999999998853211         


Q ss_pred             -cccchHHHHHHHHHHHHHHHHHHHHHHhccCC-chhHHHHHHHHHHHHHHHHHHHHHHHhhcccccccCCC-HHHHHHH
Q psy16816        266 -HLHIPSGSFLSLVSALFYSLYIVFLRRLEHEE-KLDIVLFYGFVGLYNCLLLWPLFFLLHYNSWEVFSLPD-RDQWVIL  342 (470)
Q Consensus       266 -~~~~~~G~llaL~sAl~~Al~~vl~r~l~~~~-~~~~~~~~g~vglf~l~~l~p~~~~l~~~~~e~~~~p~-~~~~~~l  342 (470)
                       -.....|.+.++.|+++-|--+++.|++++.. ..-...||+.+++.-.      .+.....  ..+.+|+ .++|..+
T Consensus       185 ~~~~~~~gt~aai~s~lf~asvyIilR~iGk~~h~~msvsyf~~i~lV~s------~I~~~~i--g~~~lP~cgkdr~l~  256 (346)
T KOG4510|consen  185 QVEYDIPGTVAAISSVLFGASVYIILRYIGKNAHAIMSVSYFSLITLVVS------LIGCASI--GAVQLPHCGKDRWLF  256 (346)
T ss_pred             cccccCCchHHHHHhHhhhhhHHHHHHHhhccccEEEEehHHHHHHHHHH------HHHHhhc--cceecCccccceEEE
Confidence             13456789999999999999999999997733 3333567776665322      1222222  2577776 5788888


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHhHHHHHHHHHHHHhCCCCCHHHHhHHHHHHHHHHHHHhhhcc
Q psy16816        343 LIEGLIGSVLTETLWLWGMLLTSPLIATLGLGLIVPLSMIANTSLYHVTYPRLFYVGAVPVVFAFVASILLAQM  416 (470)
Q Consensus       343 l~~gil~s~ls~~l~~~ai~~tspl~~tv~~~l~iPla~i~~~l~~ge~~s~~~iiG~~lIl~g~~l~~~~~~~  416 (470)
                      +.+|+. .++++.+...++++..+--+++..+..+.+|.+++++++|+-++++.|.|+++|+.+.+.+...++.
T Consensus       257 ~~lGvf-gfigQIllTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~~vvsS~v~~a~~kwa  329 (346)
T KOG4510|consen  257 VNLGVF-GFIGQILLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIWSWVGAVMVVSSTVWVALKKWA  329 (346)
T ss_pred             EEehhh-hhHHHHHHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChHHHhhceeeeehhHHHHHHHHHh
Confidence            888997 6788999999999988888888777888889999999999999999999999999999998866544

>TIGR00688 rarD rarD protein

Probab=99.67  E-value=8.6e-15  Score=143.66  Aligned_cols=173  Identities=13%  Similarity=0.108  Sum_probs=122.3

Q ss_pred             HHHHHHHHH--hhccchHHHHHHHhhHHHHHHHHHHHhcCCCCCccchhhHHHHHHHHHHhheeeecCcccccccchHHH
Q psy16816        196 RFGAEYTFT--LLGAEAGTVALIYSSSSVLTLLICAFFPSSSSDKFSLSKCVTVCISVCGLILVTISDVYMEHLHIPSGS  273 (470)
Q Consensus       196 ~~~~n~~~~--L~~tsvs~atiL~stsPvft~lla~lf~~~~~ek~s~~k~igvll~~~GVvli~~~~~~~~~~~~~~G~  273 (470)
                      .++..++|+  +++++++.++++.+++|+|+.+++++++   |||++++++++++++++|++++..++..    .    .
T Consensus        80 ~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l---~Ek~~~~~~l~~~~~~~Gv~li~~~~~~----~----~  148 (256)
T TIGR00688        80 IGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFL---KERISRFQFIAVIIATLGVISNIVLKGS----L----P  148 (256)
T ss_pred             HHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHH---hcCCCHHHHHHHHHHHHHHHHHHHHcCC----c----h
Confidence            444445555  9999999999999999999999999999   9999999999999999999988654211    1    1


Q ss_pred             HHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccccc-ccCCCHHHHHHHHHHHHHHHHH
Q psy16816        274 FLSLVSALFYSLYIVFLRRLEHEEKLDIVLFYGFVGLYNCLLLWPLFFLLHYNSWEV-FSLPDRDQWVILLIEGLIGSVL  352 (470)
Q Consensus       274 llaL~sAl~~Al~~vl~r~l~~~~~~~~~~~~g~vglf~l~~l~p~~~~l~~~~~e~-~~~p~~~~~~~ll~~gil~s~l  352 (470)
                      +++++++++||.|.+..|+.++.+..  ....+..  ....+..+....   .+..+ ...+....|.++++.|++ +.+
T Consensus       149 ~~~l~aa~~~a~~~i~~~~~~~~~~~--~~~~~~~--~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~g~~-t~i  220 (256)
T TIGR00688       149 WEALVLAFSFTAYGLIRKALKNTDLA--GFCLETL--SLMPVAIYYLLQ---TDFATVQQTNPFPIWLLLVLAGLI-TGT  220 (256)
T ss_pred             HHHHHHHHHHHHHHHHHhhcCCCCcc--hHHHHHH--HHHHHHHHHHHH---hccCcccccCchhHHHHHHHHHHH-HHH
Confidence            46889999999999999888753322  2222111  111111111111   11111 111223478888888987 889


Q ss_pred             HHHHHHHHHHhhchhHHHHHHHhHHHHHHHHHHHH
Q psy16816        353 TETLWLWGMLLTSPLIATLGLGLIVPLSMIANTSL  387 (470)
Q Consensus       353 s~~l~~~ai~~tspl~~tv~~~l~iPla~i~~~l~  387 (470)
                      ++.+|++++++.++..++...++..+++++++.+.
T Consensus       221 ~~~l~~~a~~~~~a~~~s~~~yl~Pv~~~~~~~~~  255 (256)
T TIGR00688       221 PLLAFVIAANRLPLNLLGLLQYIGPTIMMLCVSFL  255 (256)
T ss_pred             HHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHh
Confidence            99999999999999999987665544488887653

This uncharacterized protein is predicted to have many membrane-spanning domains.

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=99.64  E-value=3.7e-14  Score=142.20  Aligned_cols=216  Identities=11%  Similarity=0.064  Sum_probs=164.4

Q ss_pred             ChHHHHHHHHHHHHHHHHHHHHHH--hhccchHHHHHHHh-hHHHHHHHHHHHhcCCCCCccchhh----HHHHHHHHHH
Q psy16816        181 NIPQVAKVAFVFSFLRFGAEYTFT--LLGAEAGTVALIYS-SSSVLTLLICAFFPSSSSDKFSLSK----CVTVCISVCG  253 (470)
Q Consensus       181 ~~~~~~~l~~~~~~l~~~~n~~~~--L~~tsvs~atiL~s-tsPvft~lla~lf~~~~~ek~s~~k----~igvll~~~G  253 (470)
                      +.++.+..++..+..|...|++|.  .+++.++.+..+.+ +.+++..+++.+++   +||.+.++    ++|+++.++|
T Consensus        54 ~~~~~~~~g~l~G~~w~ig~~~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f---~e~~t~~~~~~~~~g~~l~l~G  130 (290)
T TIGR00776        54 WALSIFLVGLLSGAFWALGQINQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVF---GEWSTSIQTLLGLLALILIIIG  130 (290)
T ss_pred             cccHHHHHHHHHHHHHHhhhhhHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHh---hhccchHHHHHHHHHHHHHHHh
Confidence            446788888999999999999999  99999999999999 88999999999999   99999999    9999999999


Q ss_pred             hheeeecCccccc----ccchHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHH--HHHHHHHHHHHHhhcc
Q psy16816        254 LILVTISDVYMEH----LHIPSGSFLSLVSALFYSLYIVFLRRLEHEEKLDIVLFYGFVGLY--NCLLLWPLFFLLHYNS  327 (470)
Q Consensus       254 Vvli~~~~~~~~~----~~~~~G~llaL~sAl~~Al~~vl~r~l~~~~~~~~~~~~g~vglf--~l~~l~p~~~~l~~~~  327 (470)
                      ++++...+.+...    .+...|.+++++|+++|+.|.+..|..+ .++.+..+...+ |.+  +.++..+.      ..
T Consensus       131 ~~l~~~~~~~~~~~~~~~~~~~Gi~~~l~sg~~y~~~~~~~~~~~-~~~~~~~~~~~~-g~~~~~~~~~~~~------~~  202 (290)
T TIGR00776       131 VYLTSRSKDKSAGIKSEFNFKKGILLLLMSTIGYLVYVVVAKAFG-VDGLSVLLPQAI-GMVIGGIIFNLGH------IL  202 (290)
T ss_pred             HheEEeccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHcC-CCcceehhHHHH-HHHHHHHHHHHHH------hc
Confidence            9999887644221    2236799999999999999999998764 333433222221 111  11111111      00


Q ss_pred             cccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhchhHHHHHHHhHHHH-HHHHHHHHhCCCCCHHHH----hHHH
Q psy16816        328 WEVFSLPDRDQWVILLIEGLIGSVLTETLWLWGML-LTSPLIATLGLGLIVPL-SMIANTSLYHVTYPRLFY----VGAV  401 (470)
Q Consensus       328 ~e~~~~p~~~~~~~ll~~gil~s~ls~~l~~~ai~-~tspl~~tv~~~l~iPl-a~i~~~l~~ge~~s~~~i----iG~~  401 (470)
                      ..++  .....|.. +..|++ +.+++.+|+.+.+ +.++..++.... ..|+ +++++++++||+.+..++    +|.+
T Consensus       203 ~~~~--~~~~~~~~-~~~Gi~-~~ia~~~y~~~~~~~~~~~~~~~ls~-~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~  277 (290)
T TIGR00776       203 AKPL--KKYAILLN-ILPGLM-WGIGNFFYLFSAQPKVGVATSFSLSQ-LGVIISTLGGILILGEKKTKREMIAISVGII  277 (290)
T ss_pred             ccch--HHHHHHHH-HHHHHH-HHHHHHHHHHHcccccchhhHHHHHH-HHHHHHHHHHHHHhccCCCcceeehhHHHHH
Confidence            0112  12233434 448888 7999999999999 888877776554 4466 999999999999999999    9999


Q ss_pred             HHHHHHHHHHh
Q psy16816        402 PVVFAFVASIL  412 (470)
Q Consensus       402 lIl~g~~l~~~  412 (470)
                      +|+.|..+...
T Consensus       278 lIi~~~~l~~~  288 (290)
T TIGR00776       278 LIIIAANILGI  288 (290)
T ss_pred             HHHHHHHHHhc
Confidence            99999998764

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>KOG1441|consensus

Probab=99.55  E-value=1.3e-14  Score=145.74  Aligned_cols=226  Identities=12%  Similarity=0.111  Sum_probs=177.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHH--hhccchHHHHHHHhhHHHHHHHHHHHhcCCCCCccchhhHHHHHHHHHHhheeeec
Q psy16816        183 PQVAKVAFVFSFLRFGAEYTFT--LLGAEAGTVALIYSSSSVLTLLICAFFPSSSSDKFSLSKCVTVCISVCGLILVTIS  260 (470)
Q Consensus       183 ~~~~~l~~~~~~l~~~~n~~~~--L~~tsvs~atiL~stsPvft~lla~lf~~~~~ek~s~~k~igvll~~~GVvli~~~  260 (470)
                      +..++..+.+++..+++.++-+  +.|.+++..+++.+++|+|+.++++++.   +|+.+...++.++....||.+.+..
T Consensus        80 ~~~~~~llpl~~~~~~~~v~~n~Sl~~v~VsF~q~iKa~~P~~tvl~~~~~~---~~~~s~~~~lsL~piv~GV~ias~~  156 (316)
T KOG1441|consen   80 KLPLRTLLPLGLVFCISHVLGNVSLSYVPVSFYQTIKALMPPFTVLLSVLLL---GKTYSSMTYLSLLPIVFGVAIASVT  156 (316)
T ss_pred             ccchHHHHHHHHHHHHHHHhcchhhhccchhHHHHHHhhcchhHHHHHHHHh---CCCCcceEEEEEEEeeeeEEEeeec
Confidence            3344444555555556677777  9999999999999999999999999999   9999999999999999999999997


Q ss_pred             CcccccccchHHHHHHHHHHHHHHHHHHHHHHhc--cCCchhHHHHHHHHHHHHHHHHH-HHHHHHhhcccccccC-CCH
Q psy16816        261 DVYMEHLHIPSGSFLSLVSALFYSLYIVFLRRLE--HEEKLDIVLFYGFVGLYNCLLLW-PLFFLLHYNSWEVFSL-PDR  336 (470)
Q Consensus       261 ~~~~~~~~~~~G~llaL~sAl~~Al~~vl~r~l~--~~~~~~~~~~~g~vglf~l~~l~-p~~~~l~~~~~e~~~~-p~~  336 (470)
                      |...    ++.|.+.+++|-+..+...++.+++-  ++.+++...++.+.+.++++++. |.....+-...--+.. ++.
T Consensus       157 e~~f----n~~G~i~a~~s~~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~  232 (316)
T KOG1441|consen  157 ELSF----NLFGFISAMISNLAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWF  232 (316)
T ss_pred             cccc----cHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcccceeeeeccccc
Confidence            7654    49999999999999999999995554  35567776777788888888887 6554322111100011 222


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHhHHHHHHHHHHHHhCCCCCHHHHhHHHHHHHHHHHHHhhhcc
Q psy16816        337 DQWVILLIEGLIGSVLTETLWLWGMLLTSPLIATLGLGLIVPLSMIANTSLYHVTYPRLFYVGAVPVVFAFVASILLAQM  416 (470)
Q Consensus       337 ~~~~~ll~~gil~s~ls~~l~~~ai~~tspl~~tv~~~l~iPla~i~~~l~~ge~~s~~~iiG~~lIl~g~~l~~~~~~~  416 (470)
                      .....++++.+ +...-+..-++.+.+|+|++-+++..+.-.+.++.++++++++.++.+.+|+++.++|+++|++-+.+
T Consensus       233 ~~~~~~~~~sv-~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~~~k~~  311 (316)
T KOG1441|consen  233 VTFLILLLNSV-LAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYSRAKLK  311 (316)
T ss_pred             hhhHHHHHHHH-HHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHHHHhhh
Confidence            22444555554 46677888899999999999998887777778889999999999999999999999999999977544

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=99.44  E-value=3.3e-11  Score=117.93  Aligned_cols=211  Identities=15%  Similarity=0.179  Sum_probs=150.1

Q ss_pred             ChHHHHHHHHHHHHHHHHHHHHHH--hhccchHHHHHHHhhHHHHHHHHHHHhcCCCCCccchhhHHHHHHHHHHhheee
Q psy16816        181 NIPQVAKVAFVFSFLRFGAEYTFT--LLGAEAGTVALIYSSSSVLTLLICAFFPSSSSDKFSLSKCVTVCISVCGLILVT  258 (470)
Q Consensus       181 ~~~~~~~l~~~~~~l~~~~n~~~~--L~~tsvs~atiL~stsPvft~lla~lf~~~~~ek~s~~k~igvll~~~GVvli~  258 (470)
                      +.|+.++.+++.+ ++.+.|...+  +++++++..+++..+-.++|++++++++   ++|++.++|+++++-++|++++.
T Consensus        13 ~~~~~~~~~vPA~-lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L---~r~ls~~qW~aL~lL~~Gv~lv~   88 (244)
T PF04142_consen   13 SPKDTLKLAVPAL-LYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLL---KRRLSRRQWLALFLLVAGVVLVQ   88 (244)
T ss_pred             hHHHHHHHHHHHH-HHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHH---HcccchhhHHHHHHHHHHHheee
Confidence            3456667765554 5777776666  9999999999999999999999999999   99999999999999999999998


Q ss_pred             ecCcccc-------------cccchHHHHHHHHHHHHHHHHHHHH-HHhccCC-chhH-HHHHHHHHHHHHHHHHHHHHH
Q psy16816        259 ISDVYME-------------HLHIPSGSFLSLVSALFYSLYIVFL-RRLEHEE-KLDI-VLFYGFVGLYNCLLLWPLFFL  322 (470)
Q Consensus       259 ~~~~~~~-------------~~~~~~G~llaL~sAl~~Al~~vl~-r~l~~~~-~~~~-~~~~g~vglf~l~~l~p~~~~  322 (470)
                      ..+....             ..+...|.++.++++++.|+..|.. |.+++.+ +... .+.+++.|++..   ......
T Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~vl~~~~~S~~agVy~E~~lK~~~~s~~~~N~qL~~~gi~~~---~~~~~~  165 (244)
T PF04142_consen   89 LSSSQSSDNSSSSSVHHDASNQNPLLGLLAVLAAAFLSGFAGVYFEKLLKRSNVSLWIQNMQLYLFGILFN---LLALLL  165 (244)
T ss_pred             cCCccccccccccccccccccchhHhHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHH---HHHHhc
Confidence            7655431             1346799999999999999999999 6666532 2211 122233333221   111111


Q ss_pred             Hhhccccc---ccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHhHHHHHHHHHHHHhCCCCCHHHHhH
Q psy16816        323 LHYNSWEV---FSLPDRDQWVILLIEGLIGSVLTETLWLWGMLLTSPLIATLGLGLIVPLSMIANTSLYHVTYPRLFYVG  399 (470)
Q Consensus       323 l~~~~~e~---~~~p~~~~~~~ll~~gil~s~ls~~l~~~ai~~tspl~~tv~~~l~iPla~i~~~l~~ge~~s~~~iiG  399 (470)
                      ........   |+-.+...|..++.+++.     -.+..+.+++.+.+.-....+..+.++.+++++++|.+++...++|
T Consensus       166 ~~~~~~~~~g~f~G~~~~~~~~i~~~a~g-----Gllva~v~KyadnI~K~fa~a~siv~t~~~s~~lf~~~~s~~f~lg  240 (244)
T PF04142_consen  166 SDGSAISESGFFHGYSWWVWIVIFLQAIG-----GLLVAFVLKYADNIVKGFATAVSIVLTAVLSVLLFGFPPSLSFLLG  240 (244)
T ss_pred             ccccccccCCchhhcchHHHHHHHHHHHh-----hHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHhhh
Confidence            11111111   222233345555554443     3445577888888888877888889999999999999999999999


Q ss_pred             HHHH
Q psy16816        400 AVPV  403 (470)
Q Consensus       400 ~~lI  403 (470)
                      +++|
T Consensus       241 ~~~V  244 (244)
T PF04142_consen  241 AALV  244 (244)
T ss_pred             eecC
Confidence            8764

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>KOG3912|consensus

Probab=99.31  E-value=6.2e-11  Score=114.67  Aligned_cols=212  Identities=16%  Similarity=0.234  Sum_probs=156.8

Q ss_pred             HHHHHH-hhccchHHHHHHHhhHHHHHHHHHHHhcCCCCCccchhhHHHHHHHHHHhheeeecCcccc------cccchH
Q psy16816        199 AEYTFT-LLGAEAGTVALIYSSSSVLTLLICAFFPSSSSDKFSLSKCVTVCISVCGLILVTISDVYME------HLHIPS  271 (470)
Q Consensus       199 ~n~~~~-L~~tsvs~atiL~stsPvft~lla~lf~~~~~ek~s~~k~igvll~~~GVvli~~~~~~~~------~~~~~~  271 (470)
                      +..+|. |.+|++++.+++....-+||.+++..|+   +++++.++|+|++....|++++...|.+..      .+....
T Consensus       100 sslm~vgL~lTsASsfQMlRGaviIFvglfst~~L---n~ti~~~qWl~i~fv~lGlviVg~~d~~~~~~p~~d~s~iit  176 (372)
T KOG3912|consen  100 SSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFL---NRTITGRQWLGILFVSLGLVIVGSLDVHLVTDPYTDYSSIIT  176 (372)
T ss_pred             hHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHH---hcccchhhHHHHHHHHhhhheeeeeecccccCCccccccchh
Confidence            456667 9999999999999999999999999999   999999999999999999999988754321      255789


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhcccc-cccCCC---HHHHH-------
Q psy16816        272 GSFLSLVSALFYSLYIVFLRRLEHEEKLDIVLFYGFVGLYNCLLLWPLFFLLHYNSWE-VFSLPD---RDQWV-------  340 (470)
Q Consensus       272 G~llaL~sAl~~Al~~vl~r~l~~~~~~~~~~~~g~vglf~l~~l~p~~~~l~~~~~e-~~~~p~---~~~~~-------  340 (470)
                      |+++.+++.+.-|+.+++-.|.-+..++++....|+-|+|.++.+....+.+++.... +|.-.+   ...|.       
T Consensus       177 GdllIiiaqiivaiQ~v~Eek~l~~~nV~pl~avg~eGlfG~v~~slL~i~m~yi~~~~sfS~~~~g~~eD~~~~~~~~~  256 (372)
T KOG3912|consen  177 GDLLIIIAQIIVAIQMVCEEKQLKKSNVAPLQAVGWEGLFGLVILSLLAIPMYYIPSGDSFSCNPRGVLEDWGDAFAALQ  256 (372)
T ss_pred             hhHHHHHHHHHHHHHHHHHHhhhhhccCCHHHHhhhhhhHHHHHHHHHHHHHhheecCCcCcCCCCcchhhHHHHHHHhc
Confidence            9999999999999999999444444567777888999999887777766677665543 343221   12222       


Q ss_pred             --HHHHHHHHHHHHHHHHHHH-HHHhhchhHHHHHHHhHHH---HHHHHHHHHhCCCCCHHHHhHHHHHHHHHHHHHhh
Q psy16816        341 --ILLIEGLIGSVLTETLWLW-GMLLTSPLIATLGLGLIVP---LSMIANTSLYHVTYPRLFYVGAVPVVFAFVASILL  413 (470)
Q Consensus       341 --~ll~~gil~s~ls~~l~~~-ai~~tspl~~tv~~~l~iP---la~i~~~l~~ge~~s~~~iiG~~lIl~g~~l~~~~  413 (470)
                        ..++.++.+..++..++++ ++..|.-.-+|..+.+...   +--++++...+|.++..+++|.++.+.|.++++--
T Consensus       257 e~p~l~val~~~~vSiAffNfaGlsitk~~SattRmllD~lRt~~IWv~si~m~~E~f~llqilGFliLi~Gi~lY~~i  335 (372)
T KOG3912|consen  257 ESPSLAVALIGFTVSIAFFNFAGLSITKELSATTRMLLDSLRTYVIWVFSIAMGWEYFHLLQILGFLILIMGIILYNQI  335 (372)
T ss_pred             CCchhHHHHhhhhhheeeeeehhhHHHHHhhHHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence              2234444555666666665 5555554444444433222   22345666778999999999999999999999843

>KOG1443|consensus

Probab=99.29  E-value=3.2e-10  Score=111.16  Aligned_cols=223  Identities=17%  Similarity=0.151  Sum_probs=149.6

Q ss_pred             CCCCChHHHHHHHHHHHHHHHHHHHHHH--hhccchHHHHHHHhhHHHHHHHHHHHhcCCCCCccchhhHHHHHHHHHHh
Q psy16816        177 STKYNIPQVAKVAFVFSFLRFGAEYTFT--LLGAEAGTVALIYSSSSVLTLLICAFFPSSSSDKFSLSKCVTVCISVCGL  254 (470)
Q Consensus       177 ~~~l~~~~~~~l~~~~~~l~~~~n~~~~--L~~tsvs~atiL~stsPvft~lla~lf~~~~~ek~s~~k~igvll~~~GV  254 (470)
                      +..+++++.++..++.++.-.+---+.|  ++|++++..|+..+++++|+++|+.+|.   -||++|.-+.-+++..+|+
T Consensus        75 r~~~sw~~~Lr~~aPtalata~DIGLSN~sl~yVtlSlYTM~KSSsi~FIllFs~if~---lEk~~w~L~l~v~lI~~Gl  151 (349)
T KOG1443|consen   75 RVVLSWRDYLRRLAPTALATALDIGLSNWSLEYVTLSLYTMTKSSSILFILLFSLIFK---LEKFRWALVLIVLLIAVGL  151 (349)
T ss_pred             ccCCcHHHHHHHhhhhhhhhhcccccccceeeeeeeeeeeeccccHHHHHHHHHHHHH---hHHHHHHHHHHHHHHhhhe
Confidence            3567777777777666654433222333  9999999999999999999999999999   9999999999999999999


Q ss_pred             heeeecCcccccccchHHHHHHHHHHHHHHHHHHHHHH-hcc-----CCchhHHHHHHHHHHHHHHHHHHHHHHHhhccc
Q psy16816        255 ILVTISDVYMEHLHIPSGSFLSLVSALFYSLYIVFLRR-LEH-----EEKLDIVLFYGFVGLYNCLLLWPLFFLLHYNSW  328 (470)
Q Consensus       255 vli~~~~~~~~~~~~~~G~llaL~sAl~~Al~~vl~r~-l~~-----~~~~~~~~~~g~vglf~l~~l~p~~~~l~~~~~  328 (470)
                      +++++...+.    ...|..+.++|+++.|+.-.+.+. +.+     +.+.++.....   ....+.+.|.....+-.+.
T Consensus       152 flft~KsTqf----~i~Gf~lv~~aS~~sGlRW~~tQ~ll~~~~~~~~~P~~ti~~l~---p~M~~~Ll~~~l~fEG~~~  224 (349)
T KOG1443|consen  152 FLFTYKSTQF----NIEGFFLVLAASLLSGLRWAFTQMLLRNQPSAKRNPIDTIFHLQ---PWMSIGLLPLSLLFEGLHL  224 (349)
T ss_pred             eEEEecccce----eehhHHHHHHHHHhhhhhHHHHHHHHhcCccccCCCeeeHHHhh---hHHHHHHHHHHHHHccccc
Confidence            9999877664    488999999998888886666633 222     12333322221   1112223444433322111


Q ss_pred             ---cc-ccCCC-HHHH---HHHHHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHhHHHHHHHHHHHHhCCCCCHHHHhHH
Q psy16816        329 ---EV-FSLPD-RDQW---VILLIEGLIGSVLTETLWLWGMLLTSPLIATLGLGLIVPLSMIANTSLYHVTYPRLFYVGA  400 (470)
Q Consensus       329 ---e~-~~~p~-~~~~---~~ll~~gil~s~ls~~l~~~ai~~tspl~~tv~~~l~iPla~i~~~l~~ge~~s~~~iiG~  400 (470)
                         ++ |...+ ...+   ..+..-|+.+ ++-.+.=+....+|+.++.++..-.......+++.++.+++++...|+|.
T Consensus       225 ~~~s~~f~~~d~~~~~rv~g~i~l~g~la-F~l~~sEflLl~~Ts~ltlSIaGI~Kel~tl~la~ii~~d~ls~lN~~Gl  303 (349)
T KOG1443|consen  225 ITSSSIFRFQDTGLILRVIGLISLGGLLA-FLLEFSEFLLLSRTSSLTLSIAGIVKEVCTLLLAIIILKDQLSLLNWLGL  303 (349)
T ss_pred             chhhhHHHhcCccHHHHHHHHHHHHHHHH-HHHHHHHHheeeeccceeeeHHHHHHHHHHHHHHHHHhhcchhhhHHHHH
Confidence               11 22211 1222   2333333332 22122223455678888877766666666889999999999999999999


Q ss_pred             HHHHHHHHHH
Q psy16816        401 VPVVFAFVAS  410 (470)
Q Consensus       401 ~lIl~g~~l~  410 (470)
                      ++.+.|+...
T Consensus       304 ~i~~agi~~~  313 (349)
T KOG1443|consen  304 AICLAGILLH  313 (349)
T ss_pred             HHHHHHHHHh
Confidence            9999999988

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=99.28  E-value=5.4e-10  Score=106.98  Aligned_cols=222  Identities=18%  Similarity=0.128  Sum_probs=160.0

Q ss_pred             CCCCChHHHHHHHHHHHHHHHHHHHHHH-hhccchHHHHHHHhhHHHHHHHHHHHhcCCCCCccchhhHHHHHHHHHHhh
Q psy16816        177 STKYNIPQVAKVAFVFSFLRFGAEYTFT-LLGAEAGTVALIYSSSSVLTLLICAFFPSSSSDKFSLSKCVTVCISVCGLI  255 (470)
Q Consensus       177 ~~~l~~~~~~~l~~~~~~l~~~~n~~~~-L~~tsvs~atiL~stsPvft~lla~lf~~~~~ek~s~~k~igvll~~~GVv  255 (470)
                      +.+++.++...+..+...+-.+...||. ++..|.+.+..+-.+-|+.+.+++       .+|  .+..+-+.+.+.|+.
T Consensus        63 r~r~~~~~~~~~~~yGvsLg~MNl~FY~si~riPlGiAVAiEF~GPL~vA~~~-------sRr--~~d~vwvaLAvlGi~  133 (292)
T COG5006          63 RRRLSKPQRLALLAYGVSLGGMNLLFYLSIERIPLGIAVAIEFTGPLAVALLS-------SRR--LRDFVWVALAVLGIW  133 (292)
T ss_pred             HhccChhhhHHHHHHHHHHHHHHHHHHHHHHhccchhhhhhhhccHHHHHHHh-------ccc--hhhHHHHHHHHHHHH
Confidence            3456666666666666655555445555 999999999999999998776655       233  445666778888988


Q ss_pred             eeeecCcccccccchHHHHHHHHHHHHHHHHHHHHHHhcc-CCchhHHHHHHHHHHHHHHHHHHHHHHHhhcccccccCC
Q psy16816        256 LVTISDVYMEHLHIPSGSFLSLVSALFYSLYIVFLRRLEH-EEKLDIVLFYGFVGLYNCLLLWPLFFLLHYNSWEVFSLP  334 (470)
Q Consensus       256 li~~~~~~~~~~~~~~G~llaL~sAl~~Al~~vl~r~l~~-~~~~~~~~~~g~vglf~l~~l~p~~~~l~~~~~e~~~~p  334 (470)
                      ++.-..... ......|..+++.++.|||.|.+.-+|.++ ++... ..-.|  ...+.++..|+.+..  .+  + ...
T Consensus       134 lL~p~~~~~-~~lDp~Gv~~Al~AG~~Wa~YIv~G~r~g~~~~g~~-g~a~g--m~vAaviv~Pig~~~--ag--~-~l~  204 (292)
T COG5006         134 LLLPLGQSV-WSLDPVGVALALGAGACWALYIVLGQRAGRAEHGTA-GVAVG--MLVAALIVLPIGAAQ--AG--P-ALF  204 (292)
T ss_pred             hheeccCCc-CcCCHHHHHHHHHHhHHHHHHHHHcchhcccCCCch-HHHHH--HHHHHHHHhhhhhhh--cc--h-hhc
Confidence            877554332 255689999999999999999999988874 32221 11122  222334445544321  11  1 222


Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHhHHHHHHHHHHHHhCCCCCHHHHhHHHHHHHHHHHHHhhh
Q psy16816        335 DRDQWVILLIEGLIGSVLTETLWLWGMLLTSPLIATLGLGLIVPLSMIANTSLYHVTYPRLFYVGAVPVVFAFVASILLA  414 (470)
Q Consensus       335 ~~~~~~~ll~~gil~s~ls~~l~~~ai~~tspl~~tv~~~l~iPla~i~~~l~~ge~~s~~~iiG~~lIl~g~~l~~~~~  414 (470)
                      ++.....-+..|++++.+.|.+=..++.+..+-+-++.+++..-++.+.+++++||.+|+.||+|.+.|+.+..-..+..
T Consensus       205 ~p~ll~laLgvavlSSalPYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsaG~~lt~  284 (292)
T COG5006         205 SPSLLPLALGVAVLSSALPYSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASAGSTLTA  284 (292)
T ss_pred             ChHHHHHHHHHHHHhcccchHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhcccccc
Confidence            34455666778999999999999999999888888778887766699999999999999999999999999988777664


Q ss_pred             cc
Q psy16816        415 QM  416 (470)
Q Consensus       415 ~~  416 (470)
                      ++
T Consensus       285 ~~  286 (292)
T COG5006         285 RK  286 (292)
T ss_pred             CC
Confidence            33

>KOG2766|consensus

Probab=99.26  E-value=3.9e-13  Score=128.24  Aligned_cols=211  Identities=18%  Similarity=0.260  Sum_probs=147.1

Q ss_pred             HHHHHHHHHHHHHH--hhccchHHHHHHHhhHHHHHHHHHHHhcCCCCCccchhhHHHHHHHHHHhheeeecCcccc---
Q psy16816        191 VFSFLRFGAEYTFT--LLGAEAGTVALIYSSSSVLTLLICAFFPSSSSDKFSLSKCVTVCISVCGLILVTISDVYME---  265 (470)
Q Consensus       191 ~~~~l~~~~n~~~~--L~~tsvs~atiL~stsPvft~lla~lf~~~~~ek~s~~k~igvll~~~GVvli~~~~~~~~---  265 (470)
                      .+++.-.-+||+-.  .+||+..+++.|-+-.-..+++++|+|+   |.|..+.|+.||++|++||+++...|.+..   
T Consensus        83 lla~~DVEaNy~vV~AyQyTsmtSi~lLDcwaip~v~~lsw~fL---ktrYrlmki~gV~iCi~GvvmvV~sDV~agd~a  159 (336)
T KOG2766|consen   83 LLAFVDVEANYFVVKAYQYTSMTSIMLLDCWAIPCVLVLSWFFL---KTRYRLMKISGVVICIVGVVMVVFSDVHAGDRA  159 (336)
T ss_pred             heeEEeecccEEEeeehhhcchHHHHHHHHhhhHHHHHHHHHHH---HHHHhhheeeeEEeEecceEEEEEeeecccccc
Confidence            33344445777666  9999999999999999889999999999   999999999999999999999998886542   


Q ss_pred             -cccchHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhcccccccCCCHHHHHHHHH
Q psy16816        266 -HLHIPSGSFLSLVSALFYSLYIVFLRRLEHEEKLDIVLFYGFVGLYNCLLLWPLFFLLHYNSWEVFSLPDRDQWVILLI  344 (470)
Q Consensus       266 -~~~~~~G~llaL~sAl~~Al~~vl~r~l~~~~~~~~~~~~g~vglf~l~~l~p~~~~l~~~~~e~~~~p~~~~~~~ll~  344 (470)
                       +.+...||++.+++|-+||+-++....+.+  +.+.+-++|++|+|..+....- ++....+....++. .....++ .
T Consensus       160 ggsnp~~GD~lvi~GATlYaVSNv~EEflvk--n~d~~elm~~lgLfGaIIsaIQ-~i~~~~~~~tl~w~-~~i~~yl-~  234 (336)
T KOG2766|consen  160 GGSNPVKGDFLVIAGATLYAVSNVSEEFLVK--NADRVELMGFLGLFGAIISAIQ-FIFERHHVSTLHWD-SAIFLYL-R  234 (336)
T ss_pred             CCCCCccCcEEEEecceeeeeccccHHHHHh--cCcHHHHHHHHHHHHHHHHHHH-HhhhccceeeEeeh-HHHHHHH-H
Confidence             456789999999999999999999954444  3455556677777766543222 22222222222221 1122222 2


Q ss_pred             HHHHHHHHHHHHHHHHHHhhchhHHHHHHHhHHHH-HHHHHHHHhCCCCCHHHHhHHHHHHHHHHHHHhh
Q psy16816        345 EGLIGSVLTETLWLWGMLLTSPLIATLGLGLIVPL-SMIANTSLYHVTYPRLFYVGAVPVVFAFVASILL  413 (470)
Q Consensus       345 ~gil~s~ls~~l~~~ai~~tspl~~tv~~~l~iPl-a~i~~~l~~ge~~s~~~iiG~~lIl~g~~l~~~~  413 (470)
                       ..++-++-|.+....++.+++...+++. ++.-+ +.+.  -.+|-+.+|.+++..+.+..|++++...
T Consensus       235 -f~L~MFllYsl~pil~k~~~aT~~nlsl-LTsDmwsl~i--~~FgYhv~wLY~laF~~i~~GliiYs~r  300 (336)
T KOG2766|consen  235 -FALTMFLLYSLAPILIKTNSATMFNLSL-LTSDMWSLLI--RTFGYHVDWLYFLAFATIATGLIIYSTR  300 (336)
T ss_pred             -HHHHHHHHHHhhHHheecCCceEEEhhH-hHHHHHHHHH--HHHhcchhhhhHHHHHHHHHhhEEeecc
Confidence             2333455555555566666666555543 33333 5555  5577889999999999999999998543

>KOG2234|consensus

Probab=99.24  E-value=2.8e-09  Score=107.07  Aligned_cols=213  Identities=18%  Similarity=0.269  Sum_probs=155.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHH--hhccchHHHHHHHhhHHHHHHHHHHHhcCCCCCccchhhHHHHHHHHHHhheeeec
Q psy16816        183 PQVAKVAFVFSFLRFGAEYTFT--LLGAEAGTVALIYSSSSVLTLLICAFFPSSSSDKFSLSKCVTVCISVCGLILVTIS  260 (470)
Q Consensus       183 ~~~~~l~~~~~~l~~~~n~~~~--L~~tsvs~atiL~stsPvft~lla~lf~~~~~ek~s~~k~igvll~~~GVvli~~~  260 (470)
                      +++++.+++. ++|.+.|.+++  +.+.++++.++....--+.|+++..+++   ++|+++++|.++++-++|++++-.+
T Consensus        90 ~~~lk~~vPa-~iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L---~rkLs~~Qw~Al~lL~~Gv~~vQ~~  165 (345)
T KOG2234|consen   90 RETLKVSVPA-LIYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLIL---RRKLSRLQWMALVLLFAGVALVQLP  165 (345)
T ss_pred             HHHHHHHHHH-HHHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHH---hhhhhHHHHHHHHHHHHHHHHHhcc
Confidence            4677777655 47888886666  9999999999999999999999999999   9999999999999999999999833


Q ss_pred             Ccc-------cccccchHHHHHHHHHHHHHHHHHHHH-HHhccC-Cch---hHHHHHHHHHH-HHHHHHHHHHHHHhhcc
Q psy16816        261 DVY-------MEHLHIPSGSFLSLVSALFYSLYIVFL-RRLEHE-EKL---DIVLFYGFVGL-YNCLLLWPLFFLLHYNS  327 (470)
Q Consensus       261 ~~~-------~~~~~~~~G~llaL~sAl~~Al~~vl~-r~l~~~-~~~---~~~~~~g~vgl-f~l~~l~p~~~~l~~~~  327 (470)
                      ...       ....+.+.|....+.+++..+...+.. |.+++. ...   +++++  +.|. |+++..+       ..+
T Consensus       166 ~~~~~~a~~~~~~~n~~~G~~avl~~c~~SgfAgvYfEkiLK~s~~s~wi~NiqL~--~~g~~f~~l~~~-------~~d  236 (345)
T KOG2234|consen  166 SLSPTGAKSESSAQNPFLGLVAVLVACFLSGFAGVYFEKILKGSNVSLWIRNIQLY--FFGILFNLLTIL-------LQD  236 (345)
T ss_pred             CCCCCCccCCCcccchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHH--HHHHHHHHHHHh-------hcc
Confidence            211       114567899999999999999999999 544432 122   23333  3343 2222211       111


Q ss_pred             ccc------ccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHhHHHHHHHHHHHHhCCCCCHHHHhHHH
Q psy16816        328 WEV------FSLPDRDQWVILLIEGLIGSVLTETLWLWGMLLTSPLIATLGLGLIVPLSMIANTSLYHVTYPRLFYVGAV  401 (470)
Q Consensus       328 ~e~------~~~p~~~~~~~ll~~gil~s~ls~~l~~~ai~~tspl~~tv~~~l~iPla~i~~~l~~ge~~s~~~iiG~~  401 (470)
                      .+.      |+-.+...|..++.+|+-|-.     ..+.+++.+-+.-.-..++.+.++.+.++.+++-+++....+|+.
T Consensus       237 ~~~i~~~gff~G~s~~vw~vVl~~a~gGLl-----vs~v~KyADnIlK~f~~s~aiilt~v~S~~Lf~~~~t~~F~lG~~  311 (345)
T KOG2234|consen  237 GEAINEYGFFYGYSSIVWLVVLLNAVGGLL-----VSLVMKYADNILKGFSTSVAIILTTVASIALFDFQLTLYFLLGAL  311 (345)
T ss_pred             ccccccCCccccccHHHHHHHHHHhccchh-----HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHH
Confidence            221      233344677777777764333     334555555555555556778888888999999999999999999


Q ss_pred             HHHHHHHHHHhh
Q psy16816        402 PVVFAFVASILL  413 (470)
Q Consensus       402 lIl~g~~l~~~~  413 (470)
                      +|+.++.+++..
T Consensus       312 lVi~Si~lY~~~  323 (345)
T KOG2234|consen  312 LVILSIFLYSLY  323 (345)
T ss_pred             HHHHHHHHhhcC
Confidence            999999999944

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=99.09  E-value=3e-09  Score=95.75  Aligned_cols=140  Identities=24%  Similarity=0.326  Sum_probs=110.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhccC-----CchhHHHHHHHHHHHHHHHHHHHHHHHhhcccccc--c-----CC-CHHH
Q psy16816        272 GSFLSLVSALFYSLYIVFLRRLEHE-----EKLDIVLFYGFVGLYNCLLLWPLFFLLHYNSWEVF--S-----LP-DRDQ  338 (470)
Q Consensus       272 G~llaL~sAl~~Al~~vl~r~l~~~-----~~~~~~~~~g~vglf~l~~l~p~~~~l~~~~~e~~--~-----~p-~~~~  338 (470)
                      |.+++++|.++.|++.++.|+.-++     .+.+....+.+.+..+.+++.|..++.+.......  .     .. ....
T Consensus         1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~   80 (153)
T PF03151_consen    1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF   80 (153)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence            7889999999999999999554333     45555555566677777777777766655442221  1     11 2356


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHhHHHHHHHHHHHHhCCCCCHHHHhHHHHHHHHHHHHHh
Q psy16816        339 WVILLIEGLIGSVLTETLWLWGMLLTSPLIATLGLGLIVPLSMIANTSLYHVTYPRLFYVGAVPVVFAFVASIL  412 (470)
Q Consensus       339 ~~~ll~~gil~s~ls~~l~~~ai~~tspl~~tv~~~l~iPla~i~~~l~~ge~~s~~~iiG~~lIl~g~~l~~~  412 (470)
                      +..++..|++ ..+.++..++.+++++|++.++...+..++.++.+++++||++++.+++|.++.++|+++|+|
T Consensus        81 ~~~~~~~~~~-~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ysy  153 (153)
T PF03151_consen   81 IFLLILSGLL-AFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLYSY  153 (153)
T ss_pred             HHHHHHHHHH-HHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHheeeC
Confidence            7777888887 566789999999999999999999999999999999999999999999999999999998874

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=99.09  E-value=3.3e-08  Score=96.97  Aligned_cols=204  Identities=15%  Similarity=0.192  Sum_probs=147.1

Q ss_pred             HHHHHHHHHHHHH---hhccchHHHHHHHhhHHHHHHHHHHHhcCCCCCccchhhHHHHHHHHHHhheeeecCccccccc
Q psy16816        192 FSFLRFGAEYTFT---LLGAEAGTVALIYSSSSVLTLLICAFFPSSSSDKFSLSKCVTVCISVCGLILVTISDVYMEHLH  268 (470)
Q Consensus       192 ~~~l~~~~n~~~~---L~~tsvs~atiL~stsPvft~lla~lf~~~~~ek~s~~k~igvll~~~GVvli~~~~~~~~~~~  268 (470)
                      .+..-...||.-+   ..+-.+-.++.=.+.+|++..+++.+|+   |||+++.|+++++++.+||.......++.    
T Consensus        77 l~a~li~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lfl---kErls~~Q~iAV~lA~~GV~~~~~~~g~l----  149 (293)
T COG2962          77 LTALLIGLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFL---KERLSRLQWIAVGLAAAGVLIQTWLLGSL----  149 (293)
T ss_pred             HHHHHHHHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHH---HhhccHHHHHHHHHHHHHHHHHHHHcCCC----
Confidence            3333444565555   7777888899999999999999999999   99999999999999999999887665542    


Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHHHH-HHHhhccccc-c-cCCCHHHHHHHHHH
Q psy16816        269 IPSGSFLSLVSALFYSLYIVFLRRLEHEEKLDIVLFYGFVGLYNCLLLWPLF-FLLHYNSWEV-F-SLPDRDQWVILLIE  345 (470)
Q Consensus       269 ~~~G~llaL~sAl~~Al~~vl~r~l~~~~~~~~~~~~g~vglf~l~~l~p~~-~~l~~~~~e~-~-~~p~~~~~~~ll~~  345 (470)
                      .+.    ++.=|++|+.|..+=|+++-+    ...-+..-.+    .+.|.. ..+.+..-++ + .......+..++..
T Consensus       150 pwv----al~la~sf~~Ygl~RK~~~v~----a~~g~~lE~l----~l~p~al~yl~~l~~~~~~~~~~~~~~~~LLv~a  217 (293)
T COG2962         150 PWV----ALALALSFGLYGLLRKKLKVD----ALTGLTLETL----LLLPVALIYLLFLADSGQFLQQNANSLWLLLVLA  217 (293)
T ss_pred             cHH----HHHHHHHHHHHHHHHHhcCCc----hHHhHHHHHH----HHhHHHHHHHHHHhcCchhhhcCCchHHHHHHHh
Confidence            244    566688999999777776542    2222222221    122222 1111221111 1 21344677888888


Q ss_pred             HHHHHHHHHHHHHHHHHhhchhHHHHHHHhHHHH-HHHHHHHHhCCCCCHHHHhHHHHHHHHHHHHHhhhcc
Q psy16816        346 GLIGSVLTETLWLWGMLLTSPLIATLGLGLIVPL-SMIANTSLYHVTYPRLFYVGAVPVVFAFVASILLAQM  416 (470)
Q Consensus       346 gil~s~ls~~l~~~ai~~tspl~~tv~~~l~iPl-a~i~~~l~~ge~~s~~~iiG~~lIl~g~~l~~~~~~~  416 (470)
                      |++ |.+.-.++..+-++.+=.+..... +..|. -.+++++++||+++..+++..+.|-.|..++..+..+
T Consensus       218 G~v-TavpL~lf~~aa~~lpls~~G~lq-Yi~Ptl~fllav~i~~E~~~~~~~~~F~~IW~aL~l~~~d~l~  287 (293)
T COG2962         218 GLV-TAVPLLLFAAAAKRLPLSTLGFLQ-YIEPTLMFLLAVLIFGEPFDSDQLVTFAFIWLALALFSIDGLY  287 (293)
T ss_pred             hHH-HHHHHHHHHHHHhcCCHHHHHHHH-HHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence            998 888999999999987766666555 45566 8889999999999999999999999999999977543

>KOG1580|consensus

Probab=99.05  E-value=1.5e-09  Score=102.89  Aligned_cols=209  Identities=16%  Similarity=0.166  Sum_probs=156.8

Q ss_pred             HHHHHHHHHHH--hhccchHHHHHHHhhHHHHHHHHHHHhcCCCCCccchhhHHHHHHHHHHhheeeecCccc---cccc
Q psy16816        194 FLRFGAEYTFT--LLGAEAGTVALIYSSSSVLTLLICAFFPSSSSDKFSLSKCVTVCISVCGLILVTISDVYM---EHLH  268 (470)
Q Consensus       194 ~l~~~~n~~~~--L~~tsvs~atiL~stsPvft~lla~lf~~~~~ek~s~~k~igvll~~~GVvli~~~~~~~---~~~~  268 (470)
                      .-+.++....|  ++|.+-.+..+=.++-|+=++++++++.   +++.+|+|...+++.++||++..+.+...   .++.
T Consensus        93 ~sYLlAMVssN~Alq~vpYPTqVlgKScKPIPVMilGVl~~---~KsY~w~kY~cVL~IV~GValFmYK~~Kv~g~e~~t  169 (337)
T KOG1580|consen   93 ASYLLAMVSSNQALQYVPYPTQVLGKSCKPIPVMILGVLFA---HKSYHWRKYCCVLMIVVGVALFMYKENKVGGAEDKT  169 (337)
T ss_pred             HHHHHHHHhccchhcccCCcHHHhcccCCCcceeeeehhhh---cccccHHHHHHHHHHHHHHHHhhccccccCCCcccc
Confidence            34455556666  9999999999999999999999999999   99999999999999999999998875432   2355


Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHhcc-CCch--hHHHHHHHHHHHHHHHHHHHHHHHhhccccc-----ccCCCHHHHH
Q psy16816        269 IPSGSFLSLVSALFYSLYIVFLRRLEH-EEKL--DIVLFYGFVGLYNCLLLWPLFFLLHYNSWEV-----FSLPDRDQWV  340 (470)
Q Consensus       269 ~~~G~llaL~sAl~~Al~~vl~r~l~~-~~~~--~~~~~~g~vglf~l~~l~p~~~~l~~~~~e~-----~~~p~~~~~~  340 (470)
                      ...|.++.++|-..-++....+.+++. ..+.  .|.++..   +.+.+.+-.+   +.++| |.     |..-.+..|.
T Consensus       170 ~g~GElLL~lSL~mDGlTg~~Qdrira~yq~~g~~MM~~~N---lwStL~Lg~g---~lfTG-ElweF~yF~~RhP~~~~  242 (337)
T KOG1580|consen  170 FGFGELLLILSLAMDGLTGSIQDRIRASYQRTGTSMMFYTN---LWSTLYLGAG---LLFTG-ELWEFFYFVQRHPYVFW  242 (337)
T ss_pred             cchHHHHHHHHHHhcccchhHHHHHHHhhccCchhhHHHHH---HHHHHHhhhh---heehh-hHHHHHHHHHhccHHHH
Confidence            789999999999999999998844433 2222  3333322   2222222211   12232 22     2223446677


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHhHHHHHHHHHHHHhCCCCCHHHHhHHHHHHHHHHHHHhh
Q psy16816        341 ILLIEGLIGSVLTETLWLWGMLLTSPLIATLGLGLIVPLSMIANTSLYHVTYPRLFYVGAVPVVFAFVASILL  413 (470)
Q Consensus       341 ~ll~~gil~s~ls~~l~~~ai~~tspl~~tv~~~l~iPla~i~~~l~~ge~~s~~~iiG~~lIl~g~~l~~~~  413 (470)
                      -+...|+. +.+++++.+.-+..-+|++.++....---++++.++++++++++..||+|.++++.+...-...
T Consensus       243 ~l~l~ai~-s~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~aL~~D~~~  314 (337)
T KOG1580|consen  243 DLTLLAIA-SCLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSALTADVVD  314 (337)
T ss_pred             HHHHHHHH-HHhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhhHhhc
Confidence            78888885 8899999999999999998876655555668999999999999999999999999998776544

>KOG1444|consensus

Probab=98.98  E-value=2.3e-08  Score=99.31  Aligned_cols=217  Identities=17%  Similarity=0.188  Sum_probs=159.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHH--hhccchHHHHHHHhhHHHHHHHHHHHhcCCCCCccchhhHHHHHHHHHHhheeeecCc
Q psy16816        185 VAKVAFVFSFLRFGAEYTFT--LLGAEAGTVALIYSSSSVLTLLICAFFPSSSSDKFSLSKCVTVCISVCGLILVTISDV  262 (470)
Q Consensus       185 ~~~l~~~~~~l~~~~n~~~~--L~~tsvs~atiL~stsPvft~lla~lf~~~~~ek~s~~k~igvll~~~GVvli~~~~~  262 (470)
                      ++|.-++..+++.+..+.-.  ++|.+++..+++.+.+|++|++....|+   +.|++..-+.++.+.++|......+|.
T Consensus        76 ~~kk~~P~~~lf~~~i~t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~---~~~~~~~v~~Sv~~m~~~s~~~~~~d~  152 (314)
T KOG1444|consen   76 TAKKWFPVSLLFVGMLFTGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFF---GKRPSNKVWASVFAMIIGSVAAAFTDL  152 (314)
T ss_pred             HHHHHccHHHHHHHHHHHccccccccCchHHHHHhhchHHHHHHhHHhhc---CcCchhhHHHHHHHHHHHHHhhccccc
Confidence            34444455555554444433  9999999999999999999999999999   999999999999999999999988887


Q ss_pred             ccccccchHHHHHHHHHHHHHHHHHHHHHHhccCC---chhHHHHHHHHHHHHHHHHHHHHHHHhhcc-cc--ccc---C
Q psy16816        263 YMEHLHIPSGSFLSLVSALFYSLYIVFLRRLEHEE---KLDIVLFYGFVGLYNCLLLWPLFFLLHYNS-WE--VFS---L  333 (470)
Q Consensus       263 ~~~~~~~~~G~llaL~sAl~~Al~~vl~r~l~~~~---~~~~~~~~g~vglf~l~~l~p~~~~l~~~~-~e--~~~---~  333 (470)
                      ..+    ..|-.+++...++-+.+.+..|+..+..   +.++..|=.+..+      .|.......+| +.  .++   +
T Consensus       153 sf~----~~gY~w~~~n~~~~a~~~v~~kk~vd~~~l~~~~lv~yNnl~~L------~~l~~~~~~~ge~~~l~~~~~~~  222 (314)
T KOG1444|consen  153 SFN----LRGYSWALANCLTTAAFVVYVKKSVDSANLNKFGLVFYNNLLSL------PPLLILSFITGELDALSLNFDNW  222 (314)
T ss_pred             eec----chhHHHHHHHHHHHHHHHHHHHHhhccccccceeEEeehhHHHH------HHHHHHHHHhcchHHHHhhcccc
Confidence            653    5699999999999999999996655432   2333333222222      11111111222 10  122   2


Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHhHHHH-HHHHHHHHhCCCCCHHHHhHHHHHHHHHHHHHh
Q psy16816        334 PDRDQWVILLIEGLIGSVLTETLWLWGMLLTSPLIATLGLGLIVPL-SMIANTSLYHVTYPRLFYVGAVPVVFAFVASIL  412 (470)
Q Consensus       334 p~~~~~~~ll~~gil~s~ls~~l~~~ai~~tspl~~tv~~~l~iPl-a~i~~~l~~ge~~s~~~iiG~~lIl~g~~l~~~  412 (470)
                      +....|..+...|+++.++ .++-.++...+++++-++.. ...-+ ..+..++++++++++..++|..+=+.|-+++++
T Consensus       223 ~~~~~~~~~~lScv~gf~i-sy~s~~ct~~~SAtT~tivG-~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~ggv~Y~~  300 (314)
T KOG1444|consen  223 SDSSVLVVMLLSCVMGFGI-SYTSFLCTRVNSATTTTIVG-AKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFGGVLYSY  300 (314)
T ss_pred             cchhHHHHHHHHHHHHHHH-HHHHHHHHhhccccceeehh-hhhhHHHHHHHHhcCCceechhhhHHHHHHhhhhhHHhh
Confidence            3346788888889986655 67777899999998877666 44444 777888889999999999999999999999998


Q ss_pred             hhcc
Q psy16816        413 LAQM  416 (470)
Q Consensus       413 ~~~~  416 (470)
                      ...+
T Consensus       301 ~~~~  304 (314)
T KOG1444|consen  301 ATFR  304 (314)
T ss_pred             hhhh
Confidence            7544

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=98.89  E-value=1.9e-08  Score=86.33  Aligned_cols=124  Identities=20%  Similarity=0.313  Sum_probs=89.1

Q ss_pred             HHHHHHHHHHHHhccC-CchhHHHHHHHHHHHHHHHHHHHHHHHhhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q psy16816        281 LFYSLYIVFLRRLEHE-EKLDIVLFYGFVGLYNCLLLWPLFFLLHYNSWEVFSLPDRDQWVILLIEGLIGSVLTETLWLW  359 (470)
Q Consensus       281 l~~Al~~vl~r~l~~~-~~~~~~~~~g~vglf~l~~l~p~~~~l~~~~~e~~~~p~~~~~~~ll~~gil~s~ls~~l~~~  359 (470)
                      ++||.+.+..|+..++ +......+-...+.   + +.+......   .++...++...+..+++.|++++.+++.+|++
T Consensus         1 ~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   73 (126)
T PF00892_consen    1 FSWAIYSVFSKKLLKKISPLSITFWRFLIAG---I-LLILLLILG---RKPFKNLSPRQWLWLLFLGLLGTALAYLLYFY   73 (126)
T ss_pred             ceeeeHHHHHHHHhccCCHHHHHHHHHHHHH---H-HHHHHHhhc---cccccCCChhhhhhhhHhhccceehHHHHHHH
Confidence            4688999999776553 33333332222222   2 222222211   11123334566778888888888999999999


Q ss_pred             HHHhhchhHHHHHHHhHHHHHHHHHHHHhCCCCCHHHHhHHHHHHHHHHHHH
Q psy16816        360 GMLLTSPLIATLGLGLIVPLSMIANTSLYHVTYPRLFYVGAVPVVFAFVASI  411 (470)
Q Consensus       360 ai~~tspl~~tv~~~l~iPla~i~~~l~~ge~~s~~~iiG~~lIl~g~~l~~  411 (470)
                      +++++++..++....+..+++.++++++++|++++.+++|.++++.|.++++
T Consensus        74 a~~~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~  125 (126)
T PF00892_consen   74 ALKYISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS  125 (126)
T ss_pred             HHHhcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence            9999999999987776655599999999999999999999999999999875

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>KOG1442|consensus

Probab=98.75  E-value=1e-09  Score=106.02  Aligned_cols=207  Identities=17%  Similarity=0.197  Sum_probs=156.9

Q ss_pred             hhccchHHHHHHHhhHHHHHHHHHHHhcCCCCCccchhhHHHHHHHHHHhheeeecCcccccccchHHHHHHHHHHHHHH
Q psy16816        205 LLGAEAGTVALIYSSSSVLTLLICAFFPSSSSDKFSLSKCVTVCISVCGLILVTISDVYMEHLHIPSGSFLSLVSALFYS  284 (470)
Q Consensus       205 L~~tsvs~atiL~stsPvft~lla~lf~~~~~ek~s~~k~igvll~~~GVvli~~~~~~~~~~~~~~G~llaL~sAl~~A  284 (470)
                      |+|.+++.-.+=.+..-+|+.++.++++   ++|-+..-..+.++.+.|..+=...++.. +...+.|.+++..|.++-|
T Consensus       123 L~yVgVaFYyvgRsLttvFtVlLtyvll---kqkTs~~~~~~C~lIi~GF~lGvdqE~~~-~~ls~~GvifGVlaSl~vA  198 (347)
T KOG1442|consen  123 LKYVGVAFYYVGRSLTTVFTVLLTYVLL---KQKTSFFALGCCLLIILGFGLGVDQEGST-GTLSWIGVIFGVLASLAVA  198 (347)
T ss_pred             hhhcceEEEEeccchhhhHHHHhHHhhc---ccccccccceeehhheehheecccccccc-CccchhhhHHHHHHHHHHH
Confidence            9999999999999999999999999999   99999999999999999987766655443 3567999999999999999


Q ss_pred             HHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhcc-cccc-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy16816        285 LYIVFLRRLEHEEKLDIVLFYGFVGLYNCLLLWPLFFLLHYNS-WEVF-SLPDRDQWVILLIEGLIGSVLTETLWLWGML  362 (470)
Q Consensus       285 l~~vl~r~l~~~~~~~~~~~~g~vglf~l~~l~p~~~~l~~~~-~e~~-~~p~~~~~~~ll~~gil~s~ls~~l~~~ai~  362 (470)
                      +..+..|+.-....-.+-.+-.+-.++++++..|.+.+.+..+ +-.| +.|....|..+.+.|+++..+ .+.-.|-++
T Consensus       199 lnaiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~~~~l~a~~Fw~~mtLsglfgF~m-gyvTg~QIK  277 (347)
T KOG1442|consen  199 LNAIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLILNGEFQAVVGFPHLPAIKFWILMTLSGLFGFAM-GYVTGWQIK  277 (347)
T ss_pred             HHHHhhheecccccCeehhhHHHHHHHHHHHHHHHHHHcchHHHHcCcccchHHHHHHHHHHHHHHHHHh-hheeeEEEE
Confidence            9999997554311111222233455666777778776654332 1112 334567888888889886665 466667888


Q ss_pred             hhchhHHHHHHHhHHHHHHHHHHHHhCCCCCHHHHhHHHHHHHHHHHHHhhhcc
Q psy16816        363 LTSPLIATLGLGLIVPLSMIANTSLYHVTYPRLFYVGAVPVVFAFVASILLAQM  416 (470)
Q Consensus       363 ~tspl~~tv~~~l~iPla~i~~~l~~ge~~s~~~iiG~~lIl~g~~l~~~~~~~  416 (470)
                      -|||++=.+...-....-.++++.+++|.-+..-|-|-++|+.|-..+++-++.
T Consensus       278 ~TSplThnISgTAka~aQTvlAv~~y~E~ks~lwwtsn~~vLvgs~~YT~vk~~  331 (347)
T KOG1442|consen  278 VTSPLTHNISGTAKAAAQTVLAVAYYSETKSGLWWTSNIVVLVGSLAYTLVKEH  331 (347)
T ss_pred             ecccceeeecHhHHHHHHHHHHHHHHHHHhhhheeeeeEEEEehhHHHHHHHHH
Confidence            899997655544444445667888999999999999999999999999987544

>COG2510 Predicted membrane protein [Function unknown]

Probab=98.74  E-value=7.1e-08  Score=83.62  Aligned_cols=131  Identities=18%  Similarity=0.182  Sum_probs=91.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHH-HHHHHHHHHHHHHHHHHHhhcccccccCC---CHHHHHHHHHHHH
Q psy16816        272 GSFLSLVSALFYSLYIVFLRRLEHEEKLDIVLFY-GFVGLYNCLLLWPLFFLLHYNSWEVFSLP---DRDQWVILLIEGL  347 (470)
Q Consensus       272 G~llaL~sAl~~Al~~vl~r~l~~~~~~~~~~~~-g~vglf~l~~l~p~~~~l~~~~~e~~~~p---~~~~~~~ll~~gi  347 (470)
                      ..+++++||+++++..++-|.--+.-+-+...+. ..+.+   .+++.   +....  .+++.+   +++.|..++..|+
T Consensus         4 ~~~~ALLsA~fa~L~~iF~KIGl~~vdp~~At~IRtiVi~---~~l~~---v~~~~--g~~~~~~~~~~k~~lflilSGl   75 (140)
T COG2510           4 AIIYALLSALFAGLTPIFAKIGLEGVDPDFATTIRTIVIL---IFLLI---VLLVT--GNWQAGGEIGPKSWLFLILSGL   75 (140)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhccccCccHHHHHHHHHHH---HHHHH---HHHhc--CceecccccCcceehhhhHHHH
Confidence            4688999999999999988654331111222221 22222   11111   11222  234444   5688999999996


Q ss_pred             HHHHHHHHHHHHHHHhhchhHHHHHHHhHHHHHHHHHHHHhCCCCCHHHHhHHHHHHHHHHHHH
Q psy16816        348 IGSVLTETLWLWGMLLTSPLIATLGLGLIVPLSMIANTSLYHVTYPRLFYVGAVPVVFAFVASI  411 (470)
Q Consensus       348 l~s~ls~~l~~~ai~~tspl~~tv~~~l~iPla~i~~~l~~ge~~s~~~iiG~~lIl~g~~l~~  411 (470)
                       ++.++.++|++|++...+..+.-.-.....+++++++++++|+++..+++|.++|.+|.+++.
T Consensus        76 -a~glswl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs  138 (140)
T COG2510          76 -AGGLSWLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVS  138 (140)
T ss_pred             -HHHHHHHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEe
Confidence             589999999999999887766544445555599999999999999999999999999988765

>KOG1582|consensus

Probab=98.69  E-value=1.3e-06  Score=84.79  Aligned_cols=306  Identities=10%  Similarity=0.071  Sum_probs=203.3

Q ss_pred             hhhhhhhhHHHhhHHHHHHHHHhhhhhHHHHHHHhccCCCCCccccCCCCCCcccccchhhhhhhhhhhhhhhhhhhccc
Q psy16816         16 NVLLSRFQRHALGCFVLILVDILWALSSEIVKKVDQHVEDESYFTDQTEPPGELKFPLHNLFIQVFLLVSIKKLQSASRG   95 (470)
Q Consensus        16 ~~~~~~~~r~~~G~~ll~~v~~~Wv~S~~l~~~if~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~   95 (470)
                      .--+.+.-||+-=+++-.-|-++...-+.+-++||+-+.-+||             -++-|..+..+|.-..+.+...  
T Consensus        32 g~~ls~kpkw~QFlic~~g~Ff~Yl~yGy~qElif~~~gfkp~-------------GWylTlvQf~~Ysg~glie~~~--   96 (367)
T KOG1582|consen   32 GFNLSDKPKWTQFLICSAGVFFLYLVYGYLQELIFNVEGFKPF-------------GWYLTLVQFLVYSGFGLIELQL--   96 (367)
T ss_pred             eeccccCchhhhHHHHHhHHHHHHHHHHHHHHHHhccccCccc-------------chHHHHHHHHHHHhhhheEEEe--
Confidence            3345666788877778888888899999999999996555666             2333444444443333222100  


Q ss_pred             CccccccccCCCCCCCccccccchhccccccccCccccCCCcccccccccccCChhhHHHHHHHhhhHHHhhhhcccccc
Q psy16816         96 LHGKVLFSGRSSGTESETENSMRKHVRFSKLTERPQVLGVPASFLMEAPVRHLSDKEANEALLARLSYQATLRTADFTFI  175 (470)
Q Consensus        96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~  175 (470)
                                                                                                   -+.
T Consensus        97 -----------------------------------------------------------------------------~~~   99 (367)
T KOG1582|consen   97 -----------------------------------------------------------------------------IQT   99 (367)
T ss_pred             -----------------------------------------------------------------------------ecc
Confidence                                                                                         001


Q ss_pred             cCCCCChHHHHHHHHHHHHHHHHHHHHHH--hhccchHHHHHHHhhHHHHHHHHHHHhcCCCCCccchhhHHHHHHHHHH
Q psy16816        176 QSTKYNIPQVAKVAFVFSFLRFGAEYTFT--LLGAEAGTVALIYSSSSVLTLLICAFFPSSSSDKFSLSKCVTVCISVCG  253 (470)
Q Consensus       176 ~~~~l~~~~~~~l~~~~~~l~~~~n~~~~--L~~tsvs~atiL~stsPvft~lla~lf~~~~~ek~s~~k~igvll~~~G  253 (470)
                      +++.+++|...++++....    +.-..+  +.|++-....+..+|--+=+++-+.++.   +.|..+....+..+-.+|
T Consensus       100 k~r~iP~rtY~~la~~t~g----tmGLsn~SlgYLNYPtQviFKccKliPVmiggifIq---GkRY~v~d~~aA~lm~lG  172 (367)
T KOG1582|consen  100 KRRVIPWRTYVILAFLTVG----TMGLSNGSLGYLNYPTQVIFKCCKLIPVMIGGIFIQ---GKRYGVHDYIAAMLMSLG  172 (367)
T ss_pred             cceecchhHhhhhHhhhhh----ccccCcCccccccCcHHHHHHhhhhhhhhheeeeec---cccccHHHHHHHHHHHHH
Confidence            1233456666666654433    333333  7888888888888888888888999988   899999999999999999


Q ss_pred             hheeeecCcccccccchHHHHHHHHHHHHHHHHHHHH-HHhcc--CCchhHHHHHHHHHHHHHHHHHHHHHHHhhcc--c
Q psy16816        254 LILVTISDVYMEHLHIPSGSFLSLVSALFYSLYIVFL-RRLEH--EEKLDIVLFYGFVGLYNCLLLWPLFFLLHYNS--W  328 (470)
Q Consensus       254 Vvli~~~~~~~~~~~~~~G~llaL~sAl~~Al~~vl~-r~l~~--~~~~~~~~~~g~vglf~l~~l~p~~~~l~~~~--~  328 (470)
                      +++.+..|.+.+.+-+.+|..+.-++-++-|+--.++ +..+.  ++...+.++-.-+|+.  .++.|..    .+|  +
T Consensus       173 li~FTLADs~~sPNF~~~Gv~mIsgALl~DA~iGNvQEk~m~~~~~ss~EmvfySy~iG~v--flf~~mv----lTge~f  246 (367)
T KOG1582|consen  173 LIWFTLADSQTSPNFNLIGVMMISGALLADAVIGNVQEKAMKMNPASSSEMVFYSYGIGFV--FLFAPMV----LTGELF  246 (367)
T ss_pred             HHhhhhcccccCCCcceeeHHHHHHHHHHHHHhhHHHHHHHhhCCCCcceEEEeeecccHH--HHHHHHH----hcccch
Confidence            9999999998777888999999999999999988888 44332  3444554443333331  1112221    122  1


Q ss_pred             ccc---cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHhHHHHHHHHHHHHhCCCCCHHHHhHHHHHHH
Q psy16816        329 EVF---SLPDRDQWVILLIEGLIGSVLTETLWLWGMLLTSPLIATLGLGLIVPLSMIANTSLYHVTYPRLFYVGAVPVVF  405 (470)
Q Consensus       329 e~~---~~p~~~~~~~ll~~gil~s~ls~~l~~~ai~~tspl~~tv~~~l~iPla~i~~~l~~ge~~s~~~iiG~~lIl~  405 (470)
                      ..|   .-++.+.+.+.+..+.. +.++.-+..-.++.-++.+++.....---++++++++++..+++..+.-|..+|+.
T Consensus       247 ~a~~fcaehp~~tyGy~~~~s~~-gylG~~~VLalI~~fGA~~aatvTTaRKavTi~lSfllFsKPfT~qy~~~gllv~l  325 (367)
T KOG1582|consen  247 SAWTFCAEHPVRTYGYAFLFSLA-GYLGIVFVLALIKLFGALIAATVTTARKAVTILLSFLLFSKPFTEQYVWSGLLVVL  325 (367)
T ss_pred             hhhHHHHhCcHhHHHHHHHHHHH-hHhhHHHHHHHHHHhchhHHHHHHHhHhHHHHHHHHHHHcCchHHHHhhhhHHHHH
Confidence            111   11223445555555543 45555555556666666666555555567788999999999999999999999999


Q ss_pred             HHHHHHhhhccccCChhhhhhhhh
Q psy16816        406 AFVASILLAQMASRDPVLEILLSC  429 (470)
Q Consensus       406 g~~l~~~~~~~~~~d~~~~~~~~~  429 (470)
                      |+++-.+++  .++.|..+..+|+
T Consensus       326 gI~Ln~ysk--~nk~~~~~~~~r~  347 (367)
T KOG1582|consen  326 GIYLNMYSK--RNKIPLASLIRRI  347 (367)
T ss_pred             HHHhhcccC--CCCCchhhHHhhh
Confidence            999988775  3455655555555

>KOG1581|consensus

Probab=98.63  E-value=3.7e-06  Score=82.98  Aligned_cols=213  Identities=14%  Similarity=0.104  Sum_probs=158.3

Q ss_pred             HHHHHH--hhccchHHHHHHHhhHHHHHHHHHHHhcCCCCCccchhhHHHHHHHHHHhheeeecCcccc-----cccchH
Q psy16816        199 AEYTFT--LLGAEAGTVALIYSSSSVLTLLICAFFPSSSSDKFSLSKCVTVCISVCGLILVTISDVYME-----HLHIPS  271 (470)
Q Consensus       199 ~n~~~~--L~~tsvs~atiL~stsPvft~lla~lf~~~~~ek~s~~k~igvll~~~GVvli~~~~~~~~-----~~~~~~  271 (470)
                      +.++-.  |+|.|-...++-.++--+-+++.+.++.   ++|.+..+.+...+.-.|+.+-+..+.+++     +.+..+
T Consensus        96 s~~~~yeaLKyvSyPtq~LaKscKmIPVmlmg~Lvy---~~ky~~~eYl~~~LIs~GvsiF~l~~~s~s~~~~g~~ns~~  172 (327)
T KOG1581|consen   96 SSWCGYEALKYVSYPTQTLAKSCKMIPVMLMGTLVY---GRKYSSFEYLVAFLISLGVSIFSLFPNSDSSSKSGRENSPI  172 (327)
T ss_pred             chHHHHHHHHhccchHHHHHHHhhhhHHHHHHHHHh---cCccCcHHHHHHHHHHhheeeEEEecCCCCccccCCCCchH
Confidence            344444  9999999999999999999999999999   999999999999999999998887654431     356789


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccccc--ccCCCHHHHHHHHHHHHHH
Q psy16816        272 GSFLSLVSALFYSLYIVFLRRLEHEEKLDIVLFYGFVGLYNCLLLWPLFFLLHYNSWEV--FSLPDRDQWVILLIEGLIG  349 (470)
Q Consensus       272 G~llaL~sAl~~Al~~vl~r~l~~~~~~~~~~~~g~vglf~l~~l~p~~~~l~~~~~e~--~~~p~~~~~~~ll~~gil~  349 (470)
                      |.++....-++-++-+..+.++-+..+++...++..+-+|..+.- ....+......++  |---++..+.-++..+.+ 
T Consensus       173 G~~Ll~~~L~fDgfTn~tQd~lf~~~k~s~~~mM~~vNLf~~i~~-~~~li~qg~~~~av~F~~~hp~~~~Di~l~s~~-  250 (327)
T KOG1581|consen  173 GILLLFGYLLFDGFTNATQDSLFKKYKVSSLHMMFGVNLFSAILN-GTYLILQGHLLPAVSFIKEHPDVAFDILLYSTC-  250 (327)
T ss_pred             hHHHHHHHHHHHhhHHhHHHHHhccCCccHhHHHHHHHHHHHHHH-HHhhhcCCCCchHHHHHHcChhHHHHHHHHHHh-
Confidence            999999999999999999944444445433222222333332221 1112222222222  222234566677777776 


Q ss_pred             HHHHHHHHHHHHHhhchhHHHHHHHhHHHHHHHHHHHHhCCCCCHHHHhHHHHHHHHHHHHHhhhcc
Q psy16816        350 SVLTETLWLWGMLLTSPLIATLGLGLIVPLSMIANTSLYHVTYPRLFYVGAVPVVFAFVASILLAQM  416 (470)
Q Consensus       350 s~ls~~l~~~ai~~tspl~~tv~~~l~iPla~i~~~l~~ge~~s~~~iiG~~lIl~g~~l~~~~~~~  416 (470)
                      ..+++.+.++-+.+-+|++-+..+..---++++++.+.+|.+.++.|++|..+++.|..+=.+.+++
T Consensus       251 gavGQ~FI~~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l~~~~k~~  317 (327)
T KOG1581|consen  251 GAVGQLFIFYTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFLEILLKKK  317 (327)
T ss_pred             hhhhhheehhhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHHHHHHHHh
Confidence            5678999999999999998887777677779999999999999999999999999999988876544

>TIGR00803 nst UDP-galactose transporter

Probab=98.60  E-value=3.2e-07  Score=88.22  Aligned_cols=191  Identities=15%  Similarity=0.120  Sum_probs=121.5

Q ss_pred             cchHHHHHHHhhHHHHHHHHHHHhcCCCCCccchhhHHHHHHHHHHhheeeecCccc-----------------------
Q psy16816        208 AEAGTVALIYSSSSVLTLLICAFFPSSSSDKFSLSKCVTVCISVCGLILVTISDVYM-----------------------  264 (470)
Q Consensus       208 tsvs~atiL~stsPvft~lla~lf~~~~~ek~s~~k~igvll~~~GVvli~~~~~~~-----------------------  264 (470)
                      .++.......+..++++++.++.+.   ++|.+..|++++++...|++.....+.+.                       
T Consensus         2 isvPa~~~~~s~~l~~v~l~~~~~~---~~~~~~~~i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~~~~~~~~~~~~~~   78 (222)
T TIGR00803         2 LSVPIHIIFKQNNLVLIALGNLLAA---GKQVTQLKILSTALMTLGSLVASLGDDQWFSLKLLKLGVAIVQMVQSSAKTL   78 (222)
T ss_pred             ccccchHHHHhcchHHHHHhccccc---ceeeehHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHeeeecCCCCcccc
Confidence            4566778888999999999999988   89999999999999999987533332210                       


Q ss_pred             ccccchHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhcccc-----c-ccCCCHHH
Q psy16816        265 EHLHIPSGSFLSLVSALFYSLYIVFLRRLEHEEKLDIVLFYGFVGLYNCLLLWPLFFLLHYNSWE-----V-FSLPDRDQ  338 (470)
Q Consensus       265 ~~~~~~~G~llaL~sAl~~Al~~vl~r~l~~~~~~~~~~~~g~vglf~l~~l~p~~~~l~~~~~e-----~-~~~p~~~~  338 (470)
                      ..++.+.|....+.++++-+...+...+..+..+..  .+...+.+........ .......+.+     + +.-.+...
T Consensus        79 ~~g~~~~g~~~~l~a~~~~~~~~~y~e~~~k~~~~~--~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  155 (222)
T TIGR00803        79 MFGNPVVGLSAVLSALLSSGFAGVYFEKILKDGDTM--FWSRNLQLPLFGLFST-FSVLLWSDGTLISNFGFFIGYPTAV  155 (222)
T ss_pred             ccccHHHHHHHHHHHHHHHhhhHHHHHHcccCCCCc--hHHHHHHHHHHHHHHH-HHHHhhcccchhhccCcccCCchHH
Confidence            113456777777778877777777775544422111  1111111110000000 0001111111     1 11112223


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHhHHHHHHHHHHHHhCCCCCHHHHhHHHHHHHHHHH
Q psy16816        339 WVILLIEGLIGSVLTETLWLWGMLLTSPLIATLGLGLIVPLSMIANTSLYHVTYPRLFYVGAVPVVFAFVA  409 (470)
Q Consensus       339 ~~~ll~~gil~s~ls~~l~~~ai~~tspl~~tv~~~l~iPla~i~~~l~~ge~~s~~~iiG~~lIl~g~~l  409 (470)
                      |..++.     ..+...+..+.+++.++.+.+........++.+++++++|++++..+++|+.+++.|.++
T Consensus       156 ~~~~~~-----~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~l  221 (222)
T TIGR00803       156 WIVGLL-----NVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFL  221 (222)
T ss_pred             HHHHHH-----HHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEe
Confidence            333222     334456788899999999888877777777999999999999999999999999998765

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>KOG1583|consensus

Probab=98.56  E-value=8.6e-08  Score=93.07  Aligned_cols=222  Identities=19%  Similarity=0.247  Sum_probs=146.4

Q ss_pred             CCCCChHHHHHHHHHHHHHHHHHHHHHHhhc-cchHHHHHHHhhHHHHHHHHHHHhcCCCCCccchhhHHHHHHHHHHhh
Q psy16816        177 STKYNIPQVAKVAFVFSFLRFGAEYTFTLLG-AEAGTVALIYSSSSVLTLLICAFFPSSSSDKFSLSKCVTVCISVCGLI  255 (470)
Q Consensus       177 ~~~l~~~~~~~l~~~~~~l~~~~n~~~~L~~-tsvs~atiL~stsPvft~lla~lf~~~~~ek~s~~k~igvll~~~GVv  255 (470)
                      +.+++.|++++....|...-..-|+.  +++ .+...-.++.+-+++-++++++++.   ++|.+.+|..++++.-+|++
T Consensus        59 k~kiplk~Y~i~V~mFF~vnv~NN~a--l~f~I~~PlHiIfRsgsll~nM~~g~il~---~k~Ys~~Qy~Sv~~iTiGii  133 (330)
T KOG1583|consen   59 KPKIPLKDYAITVAMFFIVNVTNNYA--LKFNIPMPLHIIFRSGSLLANMILGWILL---GKRYSLRQYSSVLMITIGII  133 (330)
T ss_pred             CCCCchhhhheehheeeeeeeeccce--eeecccceEEEEEecCcHHHHHHHHHHhc---cceeehhhhhhHHhhhhhhe
Confidence            37888998888876554433333433  333 6667777888999999999999999   99999999999999999999


Q ss_pred             eeeecCcccc---------------cccchHHHHHHHHHHHHHHHHHHHH----HHhccCCchhHHHHH-HHHHHHHHHH
Q psy16816        256 LVTISDVYME---------------HLHIPSGSFLSLVSALFYSLYIVFL----RRLEHEEKLDIVLFY-GFVGLYNCLL  315 (470)
Q Consensus       256 li~~~~~~~~---------------~~~~~~G~llaL~sAl~~Al~~vl~----r~l~~~~~~~~~~~~-g~vglf~l~~  315 (470)
                      +-+.....+.               ...+.+|+.+..++-+..|.-.+.+    ||.++.  .+-.+|+ -+..      
T Consensus       134 IcTl~s~~d~~~~~~~l~~~~~~~~~~~w~iGi~lL~~al~~sa~mgiyqE~~Y~kyGKh--~~EalFytH~Ls------  205 (330)
T KOG1583|consen  134 ICTLFSSKDGRSKLSGLDSGSAQSDFFWWLIGIALLVFALLLSAYMGIYQETTYQKYGKH--WKEALFYTHFLS------  205 (330)
T ss_pred             eEEeecCcchhhhhcccccCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC--hHHHHHHHHHhc------
Confidence            9876543211               1235678777777766666655554    555542  2222333 2322      


Q ss_pred             HHHHHHHHh------h---cccccccCCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHhHHHHHH
Q psy16816        316 LWPLFFLLH------Y---NSWEVFSLPD-----RDQWVILLIEGLIGSVLTETLWLWGMLLTSPLIATLGLGLIVPLSM  381 (470)
Q Consensus       316 l~p~~~~l~------~---~~~e~~~~p~-----~~~~~~ll~~gil~s~ls~~l~~~ai~~tspl~~tv~~~l~iPla~  381 (470)
                       .|.+.+++      +   ...|++..|.     +..|.+++.+.+. ..++.--.+..-..++++++|+...+---++.
T Consensus       206 -LP~Flf~~~div~~~~~~~~se~~~~p~~g~~vP~~~~yLl~n~L~-Qy~CikgVy~L~te~~sLTVTlvltlRKFvSL  283 (330)
T KOG1583|consen  206 -LPLFLFMGDDIVSHWRLAFKSESYLIPLLGFKVPSMWVYLLFNVLT-QYFCIKGVYILTTETSSLTVTLVLTLRKFVSL  283 (330)
T ss_pred             -cchHHHhcchHHHHHHHHhcCcceeccccCccccHHHHHHHHHHHH-HHHHHHhhhhhhceecceEEEEeeeHHHHHHH
Confidence             23332221      1   1124333332     4677777776553 22222222222334666667666656666799


Q ss_pred             HHHHHHhCCCCCHHHHhHHHHHHHHHHHHHhh
Q psy16816        382 IANTSLYHVTYPRLFYVGAVPVVFAFVASILL  413 (470)
Q Consensus       382 i~~~l~~ge~~s~~~iiG~~lIl~g~~l~~~~  413 (470)
                      +++.+.+.+++++..|+|+++++.|-+++.-.
T Consensus       284 l~SiiyF~Npft~~h~lGa~lVF~Gt~~fa~~  315 (330)
T KOG1583|consen  284 LFSIIYFENPFTPWHWLGAALVFFGTLLFANV  315 (330)
T ss_pred             hheeeEecCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999998844

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=98.45  E-value=2.1e-05  Score=77.68  Aligned_cols=217  Identities=15%  Similarity=0.181  Sum_probs=147.9

Q ss_pred             CCCCh-HHHHHHHHHHHHHHHHHHHHHH--hhccchHHHHHHHhhH-HHHHHHHHHHhcCCCCCccchhh----HHHHHH
Q psy16816        178 TKYNI-PQVAKVAFVFSFLRFGAEYTFT--LLGAEAGTVALIYSSS-SVLTLLICAFFPSSSSDKFSLSK----CVTVCI  249 (470)
Q Consensus       178 ~~l~~-~~~~~l~~~~~~l~~~~n~~~~--L~~tsvs~atiL~sts-Pvft~lla~lf~~~~~ek~s~~k----~igvll  249 (470)
                      ..++. ...+..++.-+.+|.+.+..-+  .++..+|.+.-++.-. -+.+.+++++++   +|--+...    .+++++
T Consensus        36 p~~~~~~~~~~~~~lsG~~W~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~sl~gv~~f---gEW~~~~~~~~G~~Al~l  112 (269)
T PF06800_consen   36 PAFSMSGTSFIVAFLSGAFWAIGQIGQFKSFKKIGVSKTMPISTGLQLVGTSLIGVLFF---GEWTTTTQKIIGFLALVL  112 (269)
T ss_pred             CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcceeeeccchhHHHHHHHHHHHhhc---CCCCCcchHHHHHHHHHH
Confidence            34443 4678888899999999998777  8888888888887644 566888999988   88766554    458899


Q ss_pred             HHHHhheeeecCcccc----cccchHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy16816        250 SVCGLILVTISDVYME----HLHIPSGSFLSLVSALFYSLYIVFLRRLEHEEKLDIVLFYGFVGLYNCLLLWPLFFLLHY  325 (470)
Q Consensus       250 ~~~GVvli~~~~~~~~----~~~~~~G~llaL~sAl~~Al~~vl~r~l~~~~~~~~~~~~g~vglf~l~~l~p~~~~l~~  325 (470)
                      .++|+++.+..|....    ..+...|.+..+++.+.|..|.++.|..+ .+..+..+-. .+|.+...+.     ....
T Consensus       113 iiiGv~lts~~~~~~~~~~~~~~~~kgi~~Ll~stigy~~Y~~~~~~~~-~~~~~~~lPq-aiGm~i~a~i-----~~~~  185 (269)
T PF06800_consen  113 IIIGVILTSYQDKKSDKSSSKSNMKKGILALLISTIGYWIYSVIPKAFH-VSGWSAFLPQ-AIGMLIGAFI-----FNLF  185 (269)
T ss_pred             HHHHHHHhccccccccccccccchhhHHHHHHHHHHHHHHHHHHHHhcC-CChhHhHHHH-HHHHHHHHHH-----Hhhc
Confidence            9999999998876643    23456799999999999999999987644 2344443333 2333211111     1111


Q ss_pred             cccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHhHHHHHHHHHHHHhCCCCCHH----HHhHHH
Q psy16816        326 NSWEVFSLPDRDQWVILLIEGLIGSVLTETLWLWGMLLTSPLIATLGLGLIVPLSMIANTSLYHVTYPRL----FYVGAV  401 (470)
Q Consensus       326 ~~~e~~~~p~~~~~~~ll~~gil~s~ls~~l~~~ai~~tspl~~tv~~~l~iPla~i~~~l~~ge~~s~~----~iiG~~  401 (470)
                      ...+.++   ...|.. +..|++ ..++++++..+....+..++-...-+.+.++.+.+++++||+=+..    .++|.+
T Consensus       186 ~~~~~~~---k~~~~n-il~G~~-w~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~~G~~  260 (269)
T PF06800_consen  186 SKKPFFE---KKSWKN-ILTGLI-WGIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYTLIGLI  260 (269)
T ss_pred             ccccccc---cchHHh-hHHHHH-HHHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHHHHHHH
Confidence            1111121   122333 445665 6778888988888766655544444677779999999999987744    567888


Q ss_pred             HHHHHHHH
Q psy16816        402 PVVFAFVA  409 (470)
Q Consensus       402 lIl~g~~l  409 (470)
                      +|++|.++
T Consensus       261 Liv~G~il  268 (269)
T PF06800_consen  261 LIVIGAIL  268 (269)
T ss_pred             HHHHhhhc
Confidence            88887654

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=98.40  E-value=1.1e-06  Score=75.77  Aligned_cols=62  Identities=29%  Similarity=0.377  Sum_probs=55.4

Q ss_pred             HHHHHHH--hhccchHHHHHHHhhHHHHHHHHHHHhcCCCCCccchhhHHHHHHHHHHhheeeecCcc
Q psy16816        198 GAEYTFT--LLGAEAGTVALIYSSSSVLTLLICAFFPSSSSDKFSLSKCVTVCISVCGLILVTISDVY  263 (470)
Q Consensus       198 ~~n~~~~--L~~tsvs~atiL~stsPvft~lla~lf~~~~~ek~s~~k~igvll~~~GVvli~~~~~~  263 (470)
                      ..+.+|.  +++++ +.++++.+++|+|+.+++++++   |||++++++++++++++|++++..++..
T Consensus        47 ~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~~~---~er~~~~~~~a~~l~~~Gv~li~~~~~~  110 (113)
T PF13536_consen   47 VAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWLFF---KERLSPRRWLAILLILIGVILIAWSDLT  110 (113)
T ss_pred             HHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHhhhhcc
Confidence            3444444  99999 6899999999999999999999   9999999999999999999999988765

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=98.27  E-value=3.7e-05  Score=76.57  Aligned_cols=134  Identities=15%  Similarity=0.065  Sum_probs=91.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhcccccccCCCHHHHHHHHHHHHHHHHH
Q psy16816        273 SFLSLVSALFYSLYIVFLRRLEHEEKLDIVLFYGFVGLYNCLLLWPLFFLLHYNSWEVFSLPDRDQWVILLIEGLIGSVL  352 (470)
Q Consensus       273 ~llaL~sAl~~Al~~vl~r~l~~~~~~~~~~~~g~vglf~l~~l~p~~~~l~~~~~e~~~~p~~~~~~~ll~~gil~s~l  352 (470)
                      .++.++++++||.+.++.|+..+.+ .....++..   +..+++.|.... ... ...+..+....|..++..+ ++...
T Consensus         3 ~~~~~~aa~~~a~~~~~~k~~~~~~-~~~~~~~~~---~~~~~l~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~-~~~~~   75 (281)
T TIGR03340         3 LTLVVFSALMHAGWNLMAKSHADKE-PDFLWWALL---AHSVLLTPYGLW-YLA-QVGWSRLPATFWLLLAISA-VANMV   75 (281)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCCch-hHHHHHHHH---HHHHHHHHHHHH-hcc-cCCCCCcchhhHHHHHHHH-HHHHH
Confidence            4688999999999999998665432 222333322   223344443321 100 1123333334444444444 45677


Q ss_pred             HHHHHHHHHHhhchhHHHHHHHhHHHHHHHHHHHHhCCCCCHHHHhHHHHHHHHHHHHHhh
Q psy16816        353 TETLWLWGMLLTSPLIATLGLGLIVPLSMIANTSLYHVTYPRLFYVGAVPVVFAFVASILL  413 (470)
Q Consensus       353 s~~l~~~ai~~tspl~~tv~~~l~iPla~i~~~l~~ge~~s~~~iiG~~lIl~g~~l~~~~  413 (470)
                      .+.++.++++++++..++...+...+++++++++++||+++..+++|.++++.|++++..+
T Consensus        76 ~~~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~~  136 (281)
T TIGR03340        76 YFLGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGLS  136 (281)
T ss_pred             HHHHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhcc
Confidence            8889999999999988887776664449999999999999999999999999999988754

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=98.26  E-value=2.1e-05  Score=79.35  Aligned_cols=199  Identities=17%  Similarity=0.202  Sum_probs=112.5

Q ss_pred             hhccchHHHHHHHhhHHHHHHHHHHHhcCCCCCccchhhHHHHHHHHHHhheeeecCcccccccchHHHHH---------
Q psy16816        205 LLGAEAGTVALIYSSSSVLTLLICAFFPSSSSDKFSLSKCVTVCISVCGLILVTISDVYMEHLHIPSGSFL---------  275 (470)
Q Consensus       205 L~~tsvs~atiL~stsPvft~lla~lf~~~~~ek~s~~k~igvll~~~GVvli~~~~~~~~~~~~~~G~ll---------  275 (470)
                      +.+.|++.++-+.+.+-++..+++..++   +||++++.++|++++++|.+++.....+..+.. ..-.+.         
T Consensus        71 l~~ap~slv~Plg~~~lv~~~~~a~~~l---~e~~~~~~~~G~~l~i~G~~liv~~~~~~~~~~-t~~~l~~~~~~~~fl  146 (300)
T PF05653_consen   71 LGFAPASLVAPLGALSLVFNAVLARFFL---GEKLTRRDIVGCALIILGSVLIVIFAPKEEPIH-TLDELIALLSQPGFL  146 (300)
T ss_pred             HHhhhHHHHHHHHhhhhhhHHHHhHHHh---cccchHhHHhhHHHHHhhheeeEEeCCCCCCcC-CHHHHHHHhcCccee
Confidence            8999999999999999999999999999   999999999999999999998876543322111 011111         


Q ss_pred             ---HHHHHHHHHHHHHHHHHhccCCchhHHHHH---HHHHHHHHHHHHHHHHHH--hhcccccccCCCHHHHHHHHHHHH
Q psy16816        276 ---SLVSALFYSLYIVFLRRLEHEEKLDIVLFY---GFVGLYNCLLLWPLFFLL--HYNSWEVFSLPDRDQWVILLIEGL  347 (470)
Q Consensus       276 ---aL~sAl~~Al~~vl~r~l~~~~~~~~~~~~---g~vglf~l~~l~p~~~~l--~~~~~e~~~~p~~~~~~~ll~~gi  347 (470)
                         .+...+...+.....++.++   .++..+.   +.+|.++.+..=.....+  ...|-.  ....+..|..++... 
T Consensus       147 ~y~~~~~~~~~~L~~~~~~r~g~---~~i~vyi~i~sl~Gs~tvl~~K~i~~~i~~~~~g~~--~f~~~~~y~l~~~~v-  220 (300)
T PF05653_consen  147 VYFILVLVLILILIFFIKPRYGR---RNILVYISICSLIGSFTVLSAKAISILIKLTFSGDN--QFTYPLTYLLLLVLV-  220 (300)
T ss_pred             hhHHHHHHHHHHHHHhhcchhcc---cceEEEEEEeccccchhhhHHHHHHHHHHHHhcCch--hhhhhHHHHHHHHHH-
Confidence               11111111111111122222   1111121   223332222111111111  111211  122234454444332 


Q ss_pred             HHHHHHHHHHHHHHHhhchhHHH-HHHHhHHHHHHHHHHHHhCCC--CCH----HHHhHHHHHHHHHHHHHhh
Q psy16816        348 IGSVLTETLWLWGMLLTSPLIAT-LGLGLIVPLSMIANTSLYHVT--YPR----LFYVGAVPVVFAFVASILL  413 (470)
Q Consensus       348 l~s~ls~~l~~~ai~~tspl~~t-v~~~l~iPla~i~~~l~~ge~--~s~----~~iiG~~lIl~g~~l~~~~  413 (470)
                      .+.+.-....++|+++-++..+. +....-+-.+++.+.++++|.  +++    ....|..+++.|+++.+..
T Consensus       221 ~~~~~Q~~~LN~aL~~fd~~~V~P~~~v~~t~~~i~~g~i~f~e~~~~~~~~~~~~~~G~~~ii~GV~lL~~~  293 (300)
T PF05653_consen  221 VTAVLQLYYLNKALKRFDTSLVVPVYYVFFTLSSIIGGAIFFQEFSRMTAWQIIGFLCGFLIIIIGVFLLSSS  293 (300)
T ss_pred             HHHHHHHHHHHHHHHhccceEEEeehhHHHHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHHHhhheeecc
Confidence            23444455667799987776543 223344455888999999974  444    4577888899999888744

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=98.23  E-value=2.4e-06  Score=73.23  Aligned_cols=78  Identities=15%  Similarity=0.158  Sum_probs=65.2

Q ss_pred             CCCChHHHHHHHHHHHHHHHHHHHHHH--hhccchHHHHHHHhhHHHHHHHHHHHhcCCCCCccchhhHHHHHHHHHHhh
Q psy16816        178 TKYNIPQVAKVAFVFSFLRFGAEYTFT--LLGAEAGTVALIYSSSSVLTLLICAFFPSSSSDKFSLSKCVTVCISVCGLI  255 (470)
Q Consensus       178 ~~l~~~~~~~l~~~~~~l~~~~n~~~~--L~~tsvs~atiL~stsPvft~lla~lf~~~~~ek~s~~k~igvll~~~GVv  255 (470)
                      .+.+.++.........+...+.+++++  +++++++.++++.++.|+++.+++++++   +|++++++++|++++++|++
T Consensus        46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~i~~~~~~---~e~~~~~~~~g~~l~~~g~~  122 (126)
T PF00892_consen   46 KNLSPRQWLWLLFLGLLGTALAYLLYFYALKYISASIVSILQYLSPVFAAILGWLFL---GERPSWRQIIGIILIIIGVV  122 (126)
T ss_pred             cCCChhhhhhhhHhhccceehHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHc---CCCCCHHHHHHHHHHHHHHH
Confidence            455666666655555444566666666  9999999999999999999999999999   99999999999999999998


Q ss_pred             eee
Q psy16816        256 LVT  258 (470)
Q Consensus       256 li~  258 (470)
                      ++.
T Consensus       123 l~~  125 (126)
T PF00892_consen  123 LIS  125 (126)
T ss_pred             HHH
Confidence            764

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>PRK13499 rhamnose-proton symporter; Provisional

Probab=98.15  E-value=0.00072  Score=69.34  Aligned_cols=225  Identities=14%  Similarity=0.080  Sum_probs=138.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHH--hhccchHHHHHHHh-hHHHHHHHHHHHhcCCCCCcc-------chhhHHHHHHHHHH
Q psy16816        184 QVAKVAFVFSFLRFGAEYTFT--LLGAEAGTVALIYS-SSSVLTLLICAFFPSSSSDKF-------SLSKCVTVCISVCG  253 (470)
Q Consensus       184 ~~~~l~~~~~~l~~~~n~~~~--L~~tsvs~atiL~s-tsPvft~lla~lf~~~~~ek~-------s~~k~igvll~~~G  253 (470)
                      +.+..++..+.+|.+.|..+.  .++..+|.+.-+.. +.-++..++..+++   +|=-       -..-++|+++.++|
T Consensus        71 ~~~~~~~l~G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~---gew~~~~~t~~g~~~~~gv~liliG  147 (345)
T PRK13499         71 STLLPVFLFGALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIIN---GNFDVLLATNGGRMTLLGVLVALIG  147 (345)
T ss_pred             HHHHHHHHHHHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHc---cccccccccchHHHHHHHHHHHHHH
Confidence            467788899999999999998  99998888877765 55778888888876   5322       13478899999999


Q ss_pred             hheeee----cCccc-----ccccchHHHHHHHHHHHHHHHHHHH-------HHHh--ccCCchhH--HHHHH-HHHHHH
Q psy16816        254 LILVTI----SDVYM-----EHLHIPSGSFLSLVSALFYSLYIVF-------LRRL--EHEEKLDI--VLFYG-FVGLYN  312 (470)
Q Consensus       254 Vvli~~----~~~~~-----~~~~~~~G~llaL~sAl~~Al~~vl-------~r~l--~~~~~~~~--~~~~g-~vglf~  312 (470)
                      +++.+.    .|...     .+.+...|.+++++|.+.|+.|...       .+..  .+.+....  +.+.+ ++|.+.
T Consensus       148 i~l~s~Ag~~k~~~~~~~~~~~~~~~KGi~ialisgi~~~~f~~~~~~~~~~~~~a~~~g~~~~~~~lp~~~~~~~G~~~  227 (345)
T PRK13499        148 VAIVGRAGQLKERKMGIKKAEEFNLKKGLILAVMSGIFSACFSFAMDAGKPMHEAAAALGVDPLYAALPSYVVIMGGGAI  227 (345)
T ss_pred             HHHHHHhhhhcccccccccccccchHhHHHHHHHHHHHHHHHHHHHhhccchhhhhhhcCCCchHHHHHHHHHHHHHHHH
Confidence            999988    44421     1245688999999999999999943       3221  11112211  22221 233322


Q ss_pred             HHHHHHHHHHHhhcccc---cccCCC---HHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhHHH----HHHHhHHHHHHH
Q psy16816        313 CLLLWPLFFLLHYNSWE---VFSLPD---RDQWVILLIEGLIGSVLTETLWLWGMLLTSPLIAT----LGLGLIVPLSMI  382 (470)
Q Consensus       313 l~~l~p~~~~l~~~~~e---~~~~p~---~~~~~~ll~~gil~s~ls~~l~~~ai~~tspl~~t----v~~~l~iPla~i  382 (470)
                      .-+.+.....-.-....   .+..+.   .+....-...|++ -.++++++.++..+.+...+.    +.+.+.+.++.+
T Consensus       228 ~n~~~~~~~~~k~~~~~~~~~~~~~~~~~~~n~l~~~l~G~~-W~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~Viistl  306 (345)
T PRK13499        228 TNLGFCFIRLAKNKDLSLKADFSLAKPLLITNVLLSALAGVM-WYLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCGNL  306 (345)
T ss_pred             HHHHHHHHHHhhCCCcccchhccccchhHHHHHHHHHHHHHH-HHHHHHHHHHHHHHcCCccchHHHHHhccHHHHHHHH
Confidence            11111111100100010   111111   1222222334444 666777777776654332222    233456677999


Q ss_pred             HHHHHhCCCCC------HHHHhHHHHHHHHHHHHHhh
Q psy16816        383 ANTSLYHVTYP------RLFYVGAVPVVFAFVASILL  413 (470)
Q Consensus       383 ~~~l~~ge~~s------~~~iiG~~lIl~g~~l~~~~  413 (470)
                      ++.+ +||.=+      ...++|.+++++|.+++.+.
T Consensus       307 wGi~-lkE~K~a~~k~~~~l~~G~vliI~g~~lig~~  342 (345)
T PRK13499        307 WGLV-LKEWKGASRRPVRVLSLGCVVIILAANIVGLG  342 (345)
T ss_pred             hhhh-hhhccCCCccchhHHHHHHHHHHHHHHHHhhc
Confidence            9995 888766      67799999999999998754

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=98.10  E-value=0.00012  Score=73.55  Aligned_cols=139  Identities=12%  Similarity=0.237  Sum_probs=93.3

Q ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhcccccc--cCCCHHHHHHHHHH
Q psy16816        268 HIPSGSFLSLVSALFYSLYIVFLRRLEHEEKLDIVLFYGFVGLYNCLLLWPLFFLLHYNSWEVF--SLPDRDQWVILLIE  345 (470)
Q Consensus       268 ~~~~G~llaL~sAl~~Al~~vl~r~l~~~~~~~~~~~~g~vglf~l~~l~p~~~~l~~~~~e~~--~~p~~~~~~~ll~~  345 (470)
                      +...|.+++++++++|+...+..|...+-+......+-..+|.   +++.+.....  .+....  ...+...+.. ...
T Consensus         5 ~~~~g~~~~l~a~~~wg~~~~~~k~~~~~~~~~~~~~R~~~a~---~~l~~~~~~~--~~~~~~~~~~~~~~~~~~-~~~   78 (296)
T PRK15430          5 QTRQGVLLALAAYFIWGIAPAYFKLIYYVPADEILTHRVIWSF---FFMVVLMSIC--RQWSYLKTLIQTPQKIFM-LAV   78 (296)
T ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHH---HHHHHHHHHH--ccHHHHHHHHcCHHHHHH-HHH
Confidence            4578999999999999999999987643233333332222332   2222222111  110000  0112233332 334


Q ss_pred             HHHHHHHHHHHHHHHHHhhchhHHHHHHHhHHHH-HHHHHHHHhCCCCCHHHHhHHHHHHHHHHHHHhh
Q psy16816        346 GLIGSVLTETLWLWGMLLTSPLIATLGLGLIVPL-SMIANTSLYHVTYPRLFYVGAVPVVFAFVASILL  413 (470)
Q Consensus       346 gil~s~ls~~l~~~ai~~tspl~~tv~~~l~iPl-a~i~~~l~~ge~~s~~~iiG~~lIl~g~~l~~~~  413 (470)
                      +.++..+.+.+++++++++++..+++... +.|+ .+++++++++|+++..+++|.++.++|++++..+
T Consensus        79 ~~~~~~~~~~~~~~a~~~~~~~~a~~l~~-~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~~~  146 (296)
T PRK15430         79 SAVLIGGNWLLFIWAVNNHHMLEASLGYF-INPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQLWT  146 (296)
T ss_pred             HHHHHHHHHHHHHHHHhcCchHHHHHHHH-HHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHH
Confidence            55556778999999999999999887655 5577 9999999999999999999999999999998753

>TIGR00688 rarD rarD protein

Probab=98.03  E-value=0.00022  Score=69.89  Aligned_cols=138  Identities=17%  Similarity=0.284  Sum_probs=92.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHHHHHHHh-hcc-cccccCCCH-HHHHHHHHHHH
Q psy16816        271 SGSFLSLVSALFYSLYIVFLRRLEHEEKLDIVLFYGFVGLYNCLLLWPLFFLLH-YNS-WEVFSLPDR-DQWVILLIEGL  347 (470)
Q Consensus       271 ~G~llaL~sAl~~Al~~vl~r~l~~~~~~~~~~~~g~vglf~l~~l~p~~~~l~-~~~-~e~~~~p~~-~~~~~ll~~gi  347 (470)
                      .|.++.++++++|+...+..|...+-+......+=++++.   +++.+...... ... .+.+..+.. ..+..+...|+
T Consensus         2 ~g~~~~i~a~~~wg~~~~~~k~~~~~~~~~i~~~R~~~a~---~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~   78 (256)
T TIGR00688         2 KGIIVSLLASFLFGYMYYYSKLLKPLPATDILGHRMIWSF---PFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGL   78 (256)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHH---HHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHH
Confidence            4889999999999999999987543333333333333332   22222211110 000 011221112 22444555666


Q ss_pred             HHHHHHHHHHHHHHHhhchhHHHHHHHhHHHH-HHHHHHHHhCCCCCHHHHhHHHHHHHHHHHHHhh
Q psy16816        348 IGSVLTETLWLWGMLLTSPLIATLGLGLIVPL-SMIANTSLYHVTYPRLFYVGAVPVVFAFVASILL  413 (470)
Q Consensus       348 l~s~ls~~l~~~ai~~tspl~~tv~~~l~iPl-a~i~~~l~~ge~~s~~~iiG~~lIl~g~~l~~~~  413 (470)
                      + ..+...+++++++++++..+++... +.|+ .++++.++++|+++..+++|.++.++|++++..+
T Consensus        79 ~-~~~~~~~~~~a~~~~~~~~a~~l~~-~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~~~  143 (256)
T TIGR00688        79 L-IGFNWWLFIWAVNNGSSLEVSLGYL-INPLVMVALGRVFLKERISRFQFIAVIIATLGVISNIVL  143 (256)
T ss_pred             H-HHHHHHHHHHHHHcchHHHHHHHHH-HHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH
Confidence            5 5677899999999999988887654 5677 9999999999999999999999999999987643

This uncharacterized protein is predicted to have many membrane-spanning domains.

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=97.99  E-value=6.4e-05  Score=66.52  Aligned_cols=74  Identities=19%  Similarity=0.182  Sum_probs=59.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHhHHHHHHHHHH--HHhCCCCCHHHHhHHHHHHHHHHHHHhhhc
Q psy16816        342 LLIEGLIGSVLTETLWLWGMLLTSPLIATLGLGLIVPLSMIANT--SLYHVTYPRLFYVGAVPVVFAFVASILLAQ  415 (470)
Q Consensus       342 ll~~gil~s~ls~~l~~~ai~~tspl~~tv~~~l~iPla~i~~~--l~~ge~~s~~~iiG~~lIl~g~~l~~~~~~  415 (470)
                      .++.|+++.++++++|.+++++.+...+.-..+....+..+.++  +++||++++.+++|.++|++|+++++..++
T Consensus        50 ~i~lgl~~~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~~~  125 (129)
T PRK02971         50 AVLLGLAGYALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLPTT  125 (129)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccCCC
Confidence            46678888999999999999998777766544444334555666  489999999999999999999999986543

>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

Probab=97.97  E-value=8.9e-05  Score=70.38  Aligned_cols=205  Identities=13%  Similarity=0.112  Sum_probs=145.2

Q ss_pred             hhccchHHHHHHHhhHHHHHHHHHHHhcCCCCCccchhhHHHHHHHHHHhheeeecCcccc---cccchHHHHHHHHHHH
Q psy16816        205 LLGAEAGTVALIYSSSSVLTLLICAFFPSSSSDKFSLSKCVTVCISVCGLILVTISDVYME---HLHIPSGSFLSLVSAL  281 (470)
Q Consensus       205 L~~tsvs~atiL~stsPvft~lla~lf~~~~~ek~s~~k~igvll~~~GVvli~~~~~~~~---~~~~~~G~llaL~sAl  281 (470)
                      |+|.++...++..+.+-+.++.....++   +.|.+...+..-++.+..-+....+|.+..   .+...-|-++....++
T Consensus        89 LqyL~vpiYTiFKNltII~iAygEvl~F---gg~vtsl~l~SFilMvlSS~va~w~D~q~~~~~~~~lN~GY~Wm~~Ncl  165 (309)
T COG5070          89 LQYLAVPIYTIFKNLTIILIAYGEVLFF---GGRVTSLELLSFILMVLSSVVATWGDQQASAFKAQILNPGYLWMFTNCL  165 (309)
T ss_pred             eeeeeeeHHHHhccceeehhHhhHHHHh---cCccchhhHHHHHHHHHHHHHhccchhhHHHHHhcccCCceEEEehhhH
Confidence            9999999999999999999999999999   999999999888887777777777765422   1233468889999999


Q ss_pred             HHHHHHHHHHHhcc---CCchhHHHHHHHHHHHHHHHHHHHHHHHhhccccccc-CCCHHHHHHHHHHHHHHHHHHHHHH
Q psy16816        282 FYSLYIVFLRRLEH---EEKLDIVLFYGFVGLYNCLLLWPLFFLLHYNSWEVFS-LPDRDQWVILLIEGLIGSVLTETLW  357 (470)
Q Consensus       282 ~~Al~~vl~r~l~~---~~~~~~~~~~g~vglf~l~~l~p~~~~l~~~~~e~~~-~p~~~~~~~ll~~gil~s~ls~~l~  357 (470)
                      ..|.|...+|+.-+   -.+.+...|-....+   .++...-+..+....+... -.+.....++.+.|+. ++.--++-
T Consensus       166 ssaafVL~mrkri~ltNf~d~dtmfYnNllsl---PiL~~~s~~~edws~~n~annl~~d~l~am~ISgl~-svgiSy~s  241 (309)
T COG5070         166 SSAAFVLIMRKRIKLTNFKDFDTMFYNNLLSL---PILLSFSFLFEDWSPGNLANNLSVDSLMAMFISGLC-SVGISYCS  241 (309)
T ss_pred             hHHHHHHHHHHhhcccccchhhHHHHhhhHHH---HHHHHHHHHhccCCcchhhcCCChHHHHHHHHHHHH-Hhhhhhcc
Confidence            99999999965544   234565554433332   2222222222221111111 1112345677888886 55556888


Q ss_pred             HHHHHhhchhHHHHHHHhHHHHHHHHHHHHhCCCCCHHHHhHHHHHHHHHHHHHhhhcc
Q psy16816        358 LWGMLLTSPLIATLGLGLIVPLSMIANTSLYHVTYPRLFYVGAVPVVFAFVASILLAQM  416 (470)
Q Consensus       358 ~~ai~~tspl~~tv~~~l~iPla~i~~~l~~ge~~s~~~iiG~~lIl~g~~l~~~~~~~  416 (470)
                      .|.++.|++.+-++...+.-....+.|.++++++.+...+....+=+++..++...+.+
T Consensus       242 aWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~si~sillGflsg~iYavaks~  300 (309)
T COG5070         242 AWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFLSGAIYAVAKSK  300 (309)
T ss_pred             ceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence            89999999887776655554446678999999999999999998888888888876443

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=97.90  E-value=7.6e-05  Score=64.31  Aligned_cols=63  Identities=14%  Similarity=0.039  Sum_probs=55.2

Q ss_pred             HHHHHHHHHHH--hhccchHHHHHHHhhHHHHHHHHHHHhcCCCCCccchhhHHHHHHHHHHhheeee
Q psy16816        194 FLRFGAEYTFT--LLGAEAGTVALIYSSSSVLTLLICAFFPSSSSDKFSLSKCVTVCISVCGLILVTI  259 (470)
Q Consensus       194 ~l~~~~n~~~~--L~~tsvs~atiL~stsPvft~lla~lf~~~~~ek~s~~k~igvll~~~GVvli~~  259 (470)
                      ..+.++.+++.  ++..|.+.+-.+.++.++++.+++++++   +||++.+|++|+.+.++|++++..
T Consensus        45 ~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f---~E~ls~~~~~Gi~lii~Gv~~i~~  109 (111)
T PRK15051         45 ACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLW---HEPVSPRHWCGVAFIIGGIVILGS  109 (111)
T ss_pred             HHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHh---CCCCCHHHHHHHHHHHHHHHHHhc
Confidence            33444555555  9999999999999999999999999999   999999999999999999998754

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=97.79  E-value=0.00023  Score=61.16  Aligned_cols=78  Identities=9%  Similarity=0.242  Sum_probs=64.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHhHHHHHHHHHHHHhCCCCCHHHHhHHHHHHHHHHHHHhhhc
Q psy16816        337 DQWVILLIEGLIGSVLTETLWLWGMLLTSPLIATLGLGLIVPLSMIANTSLYHVTYPRLFYVGAVPVVFAFVASILLAQ  415 (470)
Q Consensus       337 ~~~~~ll~~gil~s~ls~~l~~~ai~~tspl~~tv~~~l~iPla~i~~~l~~ge~~s~~~iiG~~lIl~g~~l~~~~~~  415 (470)
                      +.+..++..|+++...++.+|.++.+++++ .++....+...++++++.++++|+++...++|.+++++|++++.+.+.
T Consensus        32 ~~~~~~~~~g~~~~~~~~~~~~~a~~~~~~-~v~~i~~~~pi~~~ll~~~~~~er~~~~~~~a~~l~~~Gv~li~~~~~  109 (113)
T PF13536_consen   32 KPWLWLILAGLLGFGVAYLLFFYALSYAPA-LVAAIFSLSPIFTALLSWLFFKERLSPRRWLAILLILIGVILIAWSDL  109 (113)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhhhc
Confidence            345566777777666889999999999985 665555555444999999999999999999999999999999997743

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=97.71  E-value=0.00055  Score=70.05  Aligned_cols=78  Identities=17%  Similarity=0.207  Sum_probs=68.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHhHHHHHHHHHHHHhCCCCCHHHHhHHHHHHHHHHHHHhhhcc
Q psy16816        337 DQWVILLIEGLIGSVLTETLWLWGMLLTSPLIATLGLGLIVPLSMIANTSLYHVTYPRLFYVGAVPVVFAFVASILLAQM  416 (470)
Q Consensus       337 ~~~~~ll~~gil~s~ls~~l~~~ai~~tspl~~tv~~~l~iPla~i~~~l~~ge~~s~~~iiG~~lIl~g~~l~~~~~~~  416 (470)
                      ..|.++ ..|++ -+.+++++..|.++|+-..+++.....+|++++++++++++++++.+++|.++.++|+.++...+..
T Consensus        78 ~~w~y~-lla~~-Dv~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD~~  155 (334)
T PF06027_consen   78 PWWKYF-LLALL-DVEANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSDVL  155 (334)
T ss_pred             hHHHHH-HHHHH-HHHHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeeccc
Confidence            344444 45776 7789999999999999999998888999999999999999999999999999999999998877543

Some of the sequences in this family are annotated as putative membrane proteins.

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=97.47  E-value=0.0064  Score=60.91  Aligned_cols=131  Identities=15%  Similarity=0.134  Sum_probs=85.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhcccccccCCCHHHHHHHHHHHHHHHHH
Q psy16816        273 SFLSLVSALFYSLYIVFLRRLEHEEKLDIVLFYGFVGLYNCLLLWPLFFLLHYNSWEVFSLPDRDQWVILLIEGLIGSVL  352 (470)
Q Consensus       273 ~llaL~sAl~~Al~~vl~r~l~~~~~~~~~~~~g~vglf~l~~l~p~~~~l~~~~~e~~~~p~~~~~~~ll~~gil~s~l  352 (470)
                      .+..++-++.|+...+..|...+  ..++..+..+=.+++.+++++...   ..+   -..++.+.|......|++...+
T Consensus        10 ~~~~~~~~~iWg~~~~~~K~~~~--~~~p~~~~~~R~~~a~l~ll~~~~---~~~---~~~~~~~~~~~~~~~g~~~~~~   81 (292)
T PRK11272         10 FGALFALYIIWGSTYLVIRIGVE--SWPPLMMAGVRFLIAGILLLAFLL---LRG---HPLPTLRQWLNAALIGLLLLAV   81 (292)
T ss_pred             HHHHHHHHHHHhhHHHHHHHHhc--cCCHHHHHHHHHHHHHHHHHHHHH---HhC---CCCCcHHHHHHHHHHHHHHHHH
Confidence            44567778899999888886544  233322222222222333333322   111   1223445677777778776566


Q ss_pred             HHHHHHHHH-HhhchhHHHHHHHhHHHH-HHHHHHHHhCCCCCHHHHhHHHHHHHHHHHHHhh
Q psy16816        353 TETLWLWGM-LLTSPLIATLGLGLIVPL-SMIANTSLYHVTYPRLFYVGAVPVVFAFVASILL  413 (470)
Q Consensus       353 s~~l~~~ai-~~tspl~~tv~~~l~iPl-a~i~~~l~~ge~~s~~~iiG~~lIl~g~~l~~~~  413 (470)
                      .+.++.++. ..+++..+++..+ +.|+ .++++.+ +||+++..+++|.++.++|+++....
T Consensus        82 ~~~~~~~~~~~~~~a~~a~~l~~-~~Pl~~~lla~~-~~e~~~~~~~~~~~la~~Gv~ll~~~  142 (292)
T PRK11272         82 GNGMVTVAEHQNVPSGIAAVVVA-TVPLFTLCFSRL-FGIRTRKLEWLGIAIGLAGIVLLNSG  142 (292)
T ss_pred             HHHHHHHHHHccCcHHHHHHHHH-HHHHHHHHHHHH-hcccCchhHHHHHHHHHHhHHHHhcC
Confidence            677888888 7777777766554 4566 8888875 69999999999999999999988754

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=97.46  E-value=0.0015  Score=56.28  Aligned_cols=66  Identities=21%  Similarity=0.147  Sum_probs=55.7

Q ss_pred             HHHHHHHHHHHHHHHHHhhchhHHHHHHHhHHHHHHHHHHHHhCCCCCHHHHhHHHHHHHHHHHHH
Q psy16816        346 GLIGSVLTETLWLWGMLLTSPLIATLGLGLIVPLSMIANTSLYHVTYPRLFYVGAVPVVFAFVASI  411 (470)
Q Consensus       346 gil~s~ls~~l~~~ai~~tspl~~tv~~~l~iPla~i~~~l~~ge~~s~~~iiG~~lIl~g~~l~~  411 (470)
                      ++++..+++++|.+++++.+...+-...++....+.+++++++||++++.+++|.+++++|++++.
T Consensus        43 ~~~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~  108 (111)
T PRK15051         43 ALACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILG  108 (111)
T ss_pred             HHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHh
Confidence            345567789999999999877777766665444499999999999999999999999999998875

>COG2510 Predicted membrane protein [Function unknown]

Probab=97.43  E-value=0.00013  Score=63.51  Aligned_cols=58  Identities=26%  Similarity=0.421  Sum_probs=53.2

Q ss_pred             HHHHHH--hhccchHHHHHHHhhHHHHHHHHHHHhcCCCCCccchhhHHHHHHHHHHhheeee
Q psy16816        199 AEYTFT--LLGAEAGTVALIYSSSSVLTLLICAFFPSSSSDKFSLSKCVTVCISVCGLILVTI  259 (470)
Q Consensus       199 ~n~~~~--L~~tsvs~atiL~stsPvft~lla~lf~~~~~ek~s~~k~igvll~~~GVvli~~  259 (470)
                      .-++|+  ++.-.++.+.-+..++|+++.+++++|+   +||++..+++|+++..+|+++++.
T Consensus        80 swl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL---~E~ls~~~~iG~~LI~~Gailvs~  139 (140)
T COG2510          80 SWLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFL---GERLSLPTWIGIVLIVIGAILVSL  139 (140)
T ss_pred             HHHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHh---cCCCCHHHHHHHHHHHhCeeeEec
Confidence            334555  9999999999999999999999999999   999999999999999999999874

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=97.41  E-value=0.0068  Score=62.81  Aligned_cols=135  Identities=13%  Similarity=0.120  Sum_probs=90.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcc-C-CchhHHHHHHHHHHHHHHHHHHHHHHHhhcccccccCCCHHHHHHHHHHHHH
Q psy16816        271 SGSFLSLVSALFYSLYIVFLRRLEH-E-EKLDIVLFYGFVGLYNCLLLWPLFFLLHYNSWEVFSLPDRDQWVILLIEGLI  348 (470)
Q Consensus       271 ~G~llaL~sAl~~Al~~vl~r~l~~-~-~~~~~~~~~g~vglf~l~~l~p~~~~l~~~~~e~~~~p~~~~~~~ll~~gil  348 (470)
                      .-.+..++..++|+.+.++.|..-+ + +..... ++-  -.++.+++.|......  +.+.....+...|..+...|++
T Consensus        13 ~~~~~~~~~q~~~~~~~~~~k~a~~~G~~~~~~~-~~R--~~iA~l~Ll~~~~~~~--~~~~~~~~~~~~~~~l~l~g~~   87 (358)
T PLN00411         13 VFLTAMLATETSVVGISTLFKVATSKGLNIYPFL-GYS--YLLASLLLLPSLFFTN--RSRSLPPLSVSILSKIGLLGFL   87 (358)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHCCCCccHHH-HHH--HHHHHHHHHHHHHHHH--HhcccCcchHHHHHHHHHHHHH
Confidence            3455677889999999999965543 2 222222 211  1122233344332211  1111111234567778888888


Q ss_pred             HHHHHHHHHHHHHHhhchhHHHHHHHhHHHH-HHHHHHHH------hCCCCCHHHHhHHHHHHHHHHHHHh
Q psy16816        349 GSVLTETLWLWGMLLTSPLIATLGLGLIVPL-SMIANTSL------YHVTYPRLFYVGAVPVVFAFVASIL  412 (470)
Q Consensus       349 ~s~ls~~l~~~ai~~tspl~~tv~~~l~iPl-a~i~~~l~------~ge~~s~~~iiG~~lIl~g~~l~~~  412 (470)
                      + .+.+.+++++++++++..+++..+ +.|+ .+++++++      ++|+++..+++|.++-++|+.++..
T Consensus        88 g-~~~~~~~~~gl~~tsa~~asll~~-~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~  156 (358)
T PLN00411         88 G-SMYVITGYIGIEYSNPTLASAISN-ITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIF  156 (358)
T ss_pred             H-HHHHHHHHHHHhhccHHHHHHHHH-hhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHH
Confidence            6 455678899999999999998765 5566 99999988      6999999999999999999998764

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=97.34  E-value=0.0044  Score=60.38  Aligned_cols=78  Identities=17%  Similarity=0.059  Sum_probs=65.9

Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHhHHHH-HHHHHHHHhCCCCCHHHHhHHHHHHHHHHHHHhh
Q psy16816        335 DRDQWVILLIEGLIGSVLTETLWLWGMLLTSPLIATLGLGLIVPL-SMIANTSLYHVTYPRLFYVGAVPVVFAFVASILL  413 (470)
Q Consensus       335 ~~~~~~~ll~~gil~s~ls~~l~~~ai~~tspl~~tv~~~l~iPl-a~i~~~l~~ge~~s~~~iiG~~lIl~g~~l~~~~  413 (470)
                      ..+.+...+..|.++..+.+.+++++++++++..+++... +.|+ .++++.++++|++++.+++|.++.++|++++...
T Consensus        42 ~~~~~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~ii~~-~~P~~~~~~~~l~~~e~~~~~~~~gi~i~~~Gv~li~~~  120 (260)
T TIGR00950        42 PLKRLLRLLLLGALQIGVFYVLYFVAVKRLPVGEAALLLY-LAPLYVTLLSDLMGKERPRKLVLLAAVLGLAGAVLLLSD  120 (260)
T ss_pred             CHhHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHh-hhHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHhhccC
Confidence            3455666777777778888999999999999988887655 4466 9999999999999999999999999999998754

>KOG2922|consensus

Probab=97.15  E-value=0.0044  Score=62.16  Aligned_cols=201  Identities=13%  Similarity=0.173  Sum_probs=114.0

Q ss_pred             hhccchHHHHHHHhhHHHHHHHHHHHhcCCCCCccchhhHHHHHHHHHHhheeeecCcccccc---------cchHHHHH
Q psy16816        205 LLGAEAGTVALIYSSSSVLTLLICAFFPSSSSDKFSLSKCVTVCISVCGLILVTISDVYMEHL---------HIPSGSFL  275 (470)
Q Consensus       205 L~~tsvs~atiL~stsPvft~lla~lf~~~~~ek~s~~k~igvll~~~GVvli~~~~~~~~~~---------~~~~G~ll  275 (470)
                      +.+-|++.++-|.+++-++..+++..++   +||+++.-.+|.+++++|-.++.....+....         ..-.|.+ 
T Consensus        85 YaFAPasLVtPLGAlsvi~saila~~~L---~Ekl~~~g~lGc~l~v~Gst~iV~haP~e~~i~t~~el~~~~~~~~Fl-  160 (335)
T KOG2922|consen   85 YAFAPASLVTPLGALSVIISAILASFFL---KEKLNLLGILGCVLCVVGSTTIVIHAPKEQEIESVEEVWELATEPGFL-  160 (335)
T ss_pred             HhhchHhhhccchhHHHHHHHHHHHHHH---HHHHHHhhhhheeEEecccEEEEEecCcccccccHHHHHHHhcCccHH-
Confidence            7889999999999999999999999999   99999999999999999999998876553200         0001111 


Q ss_pred             HHHHHHHHHHHHHHHHHhc-cCCchhHHHHHHHHHHHH---HHHH--HHHHHHHhhcccccccCCCHHHHHHHHHHHHHH
Q psy16816        276 SLVSALFYSLYIVFLRRLE-HEEKLDIVLFYGFVGLYN---CLLL--WPLFFLLHYNSWEVFSLPDRDQWVILLIEGLIG  349 (470)
Q Consensus       276 aL~sAl~~Al~~vl~r~l~-~~~~~~~~~~~g~vglf~---l~~l--~p~~~~l~~~~~e~~~~p~~~~~~~ll~~gil~  349 (470)
                       +-.++.-.+..++.-..+ ++-..++..|.+..++.+   .+..  ....+-+.+.|.  -+...+..|..++..+.. 
T Consensus       161 -iy~~~iil~~~il~~~~~p~~g~tnilvyi~i~s~iGS~tV~svKalg~aiklt~~g~--~ql~~~~ty~~~l~~~~~-  236 (335)
T KOG2922|consen  161 -VYVIIIILIVLILIFFYAPRYGQTNILVYIGICSLIGSLTVMSVKALGIAIKLTFSGN--NQLFYPLTWIFLLVVATC-  236 (335)
T ss_pred             -HHHHHHHHHHHHHheeecccccccceeehhhHhhhhcceeeeeHHHHHHHHHHHhcCC--cccccHHHHHHHHHHHHH-
Confidence             111111111111111111 122334444544443322   1110  001111111221  122233455555554442 


Q ss_pred             HHHHHHHHHHHHHhhchhHHH-HHHHhHHHHHHHHHHHHhCCC--CCH----HHHhHHHHHHHHHHHHHhh
Q psy16816        350 SVLTETLWLWGMLLTSPLIAT-LGLGLIVPLSMIANTSLYHVT--YPR----LFYVGAVPVVFAFVASILL  413 (470)
Q Consensus       350 s~ls~~l~~~ai~~tspl~~t-v~~~l~iPla~i~~~l~~ge~--~s~----~~iiG~~lIl~g~~l~~~~  413 (470)
                      .+.=....+.|...-++.+++ +...+-.-++++.+.++++|-  .+.    ..+.|...++.|..+.+..
T Consensus       237 ~~~Q~~yLNkAL~~fntslV~PiyyV~fTtl~I~as~I~Fkew~~~~~~~i~~~~~Gf~ti~~G~flL~~~  307 (335)
T KOG2922|consen  237 VSTQMNYLNKALDLFNTSIVSPIYYVMFTTLVILASAILFKEWSGQDALDIAGELCGFVTIFLGIFLLHRT  307 (335)
T ss_pred             HHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHhHHHhhheeeEeeee
Confidence            333233446788876666554 333344556888888888763  443    3567888899998888644

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=97.06  E-value=0.0036  Score=55.38  Aligned_cols=66  Identities=18%  Similarity=0.140  Sum_probs=55.5

Q ss_pred             HHHHHHHHHHH--hhccchHHHHHHHhhHHHHHHHHHHH--hcCCCCCccchhhHHHHHHHHHHhheeeecCc
Q psy16816        194 FLRFGAEYTFT--LLGAEAGTVALIYSSSSVLTLLICAF--FPSSSSDKFSLSKCVTVCISVCGLILVTISDV  262 (470)
Q Consensus       194 ~l~~~~n~~~~--L~~tsvs~atiL~stsPvft~lla~l--f~~~~~ek~s~~k~igvll~~~GVvli~~~~~  262 (470)
                      ..+.++.+++.  ++..+++.+..+.+..++++.+.++.  ++   +|++++.|++|+++.++|++++..++.
T Consensus        56 ~~~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~---~E~ls~~~~iGi~lIi~GV~lv~~~~~  125 (129)
T PRK02971         56 AGYALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWF---NETFSLKKTLGVACIMLGVWLINLPTT  125 (129)
T ss_pred             HHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHc---CCCCCHHHHHHHHHHHHHHHHhccCCC
Confidence            34444555555  99999999999999999999888884  78   999999999999999999999886543

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=97.04  E-value=0.015  Score=57.73  Aligned_cols=137  Identities=21%  Similarity=0.377  Sum_probs=96.6

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHhccCCchhHH---HHHHHHHHHHHHHHHHHHHHHhhccccc-cc-CCCHHHHHHHH
Q psy16816        269 IPSGSFLSLVSALFYSLYIVFLRRLEHEEKLDIV---LFYGFVGLYNCLLLWPLFFLLHYNSWEV-FS-LPDRDQWVILL  343 (470)
Q Consensus       269 ~~~G~llaL~sAl~~Al~~vl~r~l~~~~~~~~~---~~~g~vglf~l~~l~p~~~~l~~~~~e~-~~-~p~~~~~~~ll  343 (470)
                      ...|.++++.+-+.|+..-...|.+..-+..++.   ..++....      ......  ..+... ++ ...++.+..+.
T Consensus         5 ~~~Gil~~l~Ay~lwG~lp~y~kll~~~~~~eIlahRviwS~~~~------l~ll~~--~r~~~~~~~~~~~p~~~~~~~   76 (293)
T COG2962           5 SRKGILLALLAYLLWGLLPLYFKLLEPLPATEILAHRVIWSFPFM------LALLFL--LRQWRELKQLLKQPKTLLMLA   76 (293)
T ss_pred             ccchhHHHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHH------HHHHHH--HhhhHHHHHHHhCcHHHHHHH
Confidence            4569999999999999999999888875444442   22222111      111111  111111 12 22345677777


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhchhHHHHHHHhHHHH-HHHHHHHHhCCCCCHHHHhHHHHHHHHHHHHHhhhc
Q psy16816        344 IEGLIGSVLTETLWLWGMLLTSPLIATLGLGLIVPL-SMIANTSLYHVTYPRLFYVGAVPVVFAFVASILLAQ  415 (470)
Q Consensus       344 ~~gil~s~ls~~l~~~ai~~tspl~~tv~~~l~iPl-a~i~~~l~~ge~~s~~~iiG~~lIl~g~~l~~~~~~  415 (470)
                      ..+++ -..-...+.|+......+-++++. +..|+ .++++.++++|+++..|++..++..+|+..-.+...
T Consensus        77 l~a~l-i~~nW~lfiWAvn~g~~leaSLGY-~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~~g  147 (293)
T COG2962          77 LTALL-IGLNWWLFIWAVNNGHVLEASLGY-FINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWLLG  147 (293)
T ss_pred             HHHHH-HHHHHHHhheecCCCchhHHHhHH-HHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHcC
Confidence            77776 345577888999999999998765 56787 999999999999999999999999999998887643

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=97.03  E-value=0.016  Score=58.20  Aligned_cols=130  Identities=9%  Similarity=0.041  Sum_probs=84.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHH-HHHHHHHHHHHHHHHHHhhcccccccCCCHHHHHHHHHHHHHHH
Q psy16816        272 GSFLSLVSALFYSLYIVFLRRLEHEEKLDIVLFYG-FVGLYNCLLLWPLFFLLHYNSWEVFSLPDRDQWVILLIEGLIGS  350 (470)
Q Consensus       272 G~llaL~sAl~~Al~~vl~r~l~~~~~~~~~~~~g-~vglf~l~~l~p~~~~l~~~~~e~~~~p~~~~~~~ll~~gil~s  350 (470)
                      |.+++++++++|+...+..|++.+   .+.+...+ .+|.   +++......   .+ .+. ......+..-+..|++ -
T Consensus         2 ~~l~~lia~~~wGs~g~~~k~~~g---~~~~~~~~~~~g~---l~~~~~~~~---~~-~~~-~~~~~~~~~g~l~G~~-w   69 (290)
T TIGR00776         2 DILIALIPALFWGSFVLINVKIGG---GPYSQTLGTTFGA---LILSIAIAI---FV-LPE-FWALSIFLVGLLSGAF-W   69 (290)
T ss_pred             chHHHHHHHHHHhhhHHHHhccCC---CHHHHHHHHHHHH---HHHHHHHHH---Hh-CCc-ccccHHHHHHHHHHHH-H
Confidence            678999999999999999988862   22222222 2222   111111111   11 111 1123334434444444 6


Q ss_pred             HHHHHHHHHHHHhhchhHHHHHHH-hHHHHHHHHHHHHhCCCCCHHH----HhHHHHHHHHHHHHHhh
Q psy16816        351 VLTETLWLWGMLLTSPLIATLGLG-LIVPLSMIANTSLYHVTYPRLF----YVGAVPVVFAFVASILL  413 (470)
Q Consensus       351 ~ls~~l~~~ai~~tspl~~tv~~~-l~iPla~i~~~l~~ge~~s~~~----iiG~~lIl~g~~l~~~~  413 (470)
                      .+++++++.++++++-..+..... +...++.+++.+++||+.+..+    ++|.+++++|.+++...
T Consensus        70 ~ig~~~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~~~  137 (290)
T TIGR00776        70 ALGQINQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTSRS  137 (290)
T ss_pred             HhhhhhHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEEec
Confidence            778999999999977766643333 3333488999999999999999    99999999998887654

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=97.03  E-value=0.0045  Score=55.33  Aligned_cols=72  Identities=13%  Similarity=0.240  Sum_probs=65.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHH--hhccchHHHHHHHhhHHHHHHHHHHHhcCCCCCccchhhHHHHHHHHHHhhee
Q psy16816        183 PQVAKVAFVFSFLRFGAEYTFT--LLGAEAGTVALIYSSSSVLTLLICAFFPSSSSDKFSLSKCVTVCISVCGLILV  257 (470)
Q Consensus       183 ~~~~~l~~~~~~l~~~~n~~~~--L~~tsvs~atiL~stsPvft~lla~lf~~~~~ek~s~~k~igvll~~~GVvli  257 (470)
                      .+.....+..|.++++.|+..+  ++++|+-+.+++...-.+.+.+++++++   +|+++..+++|++++++|+++=
T Consensus        78 ~~~~~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f---~~~~t~~~~~G~~l~~~G~~~Y  151 (153)
T PF03151_consen   78 PNFIFLLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFF---GEPITPLQIIGIVLALVGVLLY  151 (153)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhc---CCcCCHHHHHHHHHHHHHHhee
Confidence            3466677778888999998888  9999999999999999999999999999   9999999999999999999764

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=96.98  E-value=0.03  Score=56.24  Aligned_cols=127  Identities=14%  Similarity=0.140  Sum_probs=76.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhcccccccCCCHHHHHHHHHHHHHHHHH
Q psy16816        273 SFLSLVSALFYSLYIVFLRRLEHEEKLDIVLFYGFVGLYNCLLLWPLFFLLHYNSWEVFSLPDRDQWVILLIEGLIGSVL  352 (470)
Q Consensus       273 ~llaL~sAl~~Al~~vl~r~l~~~~~~~~~~~~g~vglf~l~~l~p~~~~l~~~~~e~~~~p~~~~~~~ll~~gil~s~l  352 (470)
                      .+++++++++|+...+..|..-+  ..++..+..+=..++.+.+.+.   ..   .+  ..+    +..++..|++....
T Consensus         6 ~l~~l~~~~~Wg~~~~~~k~~~~--~~~p~~~~~~R~~~a~~~l~~~---~~---~~--~~~----~~~~~~~g~~~~~~   71 (299)
T PRK11453          6 GVLALLVVVVWGLNFVVIKVGLH--NMPPLMLAGLRFMLVAFPAIFF---VA---RP--KVP----LNLLLGYGLTISFG   71 (299)
T ss_pred             HHHHHHHHHHHhhhHHHHHHHHh--cCCHHHHHHHHHHHHHHHHHHH---hc---CC--CCc----hHHHHHHHHHHHHH
Confidence            46789999999999999976543  2333222111111111111111   10   11  111    22334445543344


Q ss_pred             HHHHHHHHHHhh-chhHHHHHHHhHHHHHHHHHHHHhCCCCCHHHHhHHHHHHHHHHHHHhh
Q psy16816        353 TETLWLWGMLLT-SPLIATLGLGLIVPLSMIANTSLYHVTYPRLFYVGAVPVVFAFVASILL  413 (470)
Q Consensus       353 s~~l~~~ai~~t-spl~~tv~~~l~iPla~i~~~l~~ge~~s~~~iiG~~lIl~g~~l~~~~  413 (470)
                      .+.+++.+.+++ ++..+++...+..++..++++++++|+++..+++|.++.++|+++....
T Consensus        72 ~~~~~~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~~~  133 (299)
T PRK11453         72 QFAFLFCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLVLIED  133 (299)
T ss_pred             HHHHHHHHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHHhccc
Confidence            444566777775 4456665555443349999999999999999999999999999988754

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=96.95  E-value=0.042  Score=53.66  Aligned_cols=140  Identities=20%  Similarity=0.247  Sum_probs=89.4

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHhccC-CchhHHHHHHHHHHHHHHHHHHHHHHHhhcccccccCCCHHHHHHHHHHHH
Q psy16816        269 IPSGSFLSLVSALFYSLYIVFLRRLEHE-EKLDIVLFYGFVGLYNCLLLWPLFFLLHYNSWEVFSLPDRDQWVILLIEGL  347 (470)
Q Consensus       269 ~~~G~llaL~sAl~~Al~~vl~r~l~~~-~~~~~~~~~g~vglf~l~~l~p~~~~l~~~~~e~~~~p~~~~~~~ll~~gi  347 (470)
                      ...+....+..++.|+......+..... .......++.+...  ...    .......+.. ...+....+...+..+.
T Consensus         5 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~----~~~~~~~~~~-~~~~~~~~~~~~~~~~~   77 (292)
T COG0697           5 LLLGLLALLLWGLLWGLSFIALKLAVESLDPFLFAAALRFLIA--ALL----LLPLLLLEPR-GLRPALRPWLLLLLLAL   77 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHH--HHH----HHHHHHhhcc-cccccccchHHHHHHHH
Confidence            4678888899999999999998665542 22222222111111  111    1111111110 01111111334455556


Q ss_pred             HHHHHHHHHHHHHHHhhchhHHHHHHHhHHHH-HHHHHH-HHhCCCCCHHHHhHHHHHHHHHHHHHhhhcc
Q psy16816        348 IGSVLTETLWLWGMLLTSPLIATLGLGLIVPL-SMIANT-SLYHVTYPRLFYVGAVPVVFAFVASILLAQM  416 (470)
Q Consensus       348 l~s~ls~~l~~~ai~~tspl~~tv~~~l~iPl-a~i~~~-l~~ge~~s~~~iiG~~lIl~g~~l~~~~~~~  416 (470)
                      ++....+.+++.+++++++..++...+ +.|+ ..+++. ++++|+++...++|..+.+.|++++..+...
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~~  147 (292)
T COG0697          78 LGLALPFLLLFLALKYTSASVASLIIG-LLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLGGGG  147 (292)
T ss_pred             HHHHHHHHHHHHHHhhcchHHHHHHHH-HHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecCCCc
Confidence            667888999999999999988887655 4555 888886 7779999999999999999999999977544

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=96.94  E-value=0.032  Score=56.01  Aligned_cols=76  Identities=8%  Similarity=0.082  Sum_probs=66.5

Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHhHHHHHHHHHHHHhCCCCCHHHHhHHHHHHHHHHHHH
Q psy16816        335 DRDQWVILLIEGLIGSVLTETLWLWGMLLTSPLIATLGLGLIVPLSMIANTSLYHVTYPRLFYVGAVPVVFAFVASI  411 (470)
Q Consensus       335 ~~~~~~~ll~~gil~s~ls~~l~~~ai~~tspl~~tv~~~l~iPla~i~~~l~~ge~~s~~~iiG~~lIl~g~~l~~  411 (470)
                      +.+.|..++..|++ ..+.+.+++++++++++..+++..++..++.++++.++++|+++..+++|.+++++|+.+..
T Consensus        61 ~~~~~~~~~~~g~~-~~~~~~~~~~~l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~~  136 (302)
T TIGR00817        61 SSALLKLLLPVAIV-HTIGHVTSNVSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALAS  136 (302)
T ss_pred             CHHHHHHHHHHHHH-HHHHHHHHHHHHHhccHHHHHHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhhc
Confidence            35678888888888 46778999999999999999988776666699999999999999999999999999998765

specificities overlap.

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=96.84  E-value=0.011  Score=51.58  Aligned_cols=67  Identities=10%  Similarity=0.011  Sum_probs=51.1

Q ss_pred             HHHHHHHHHHHHHHHhhchhHHHHH-HHhHHHHHHHHHHHHhCCCCCHHHHhHHHHHHHHHHHHHhhh
Q psy16816        348 IGSVLTETLWLWGMLLTSPLIATLG-LGLIVPLSMIANTSLYHVTYPRLFYVGAVPVVFAFVASILLA  414 (470)
Q Consensus       348 l~s~ls~~l~~~ai~~tspl~~tv~-~~l~iPla~i~~~l~~ge~~s~~~iiG~~lIl~g~~l~~~~~  414 (470)
                      ++-.++++++.++++...-.++=.. ..+.+....+.+++++||++++.+++|.++|++|++.++..+
T Consensus        38 ~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~~  105 (120)
T PRK10452         38 VMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSGT  105 (120)
T ss_pred             HHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcCC
Confidence            3456788999999887443333211 224555678899999999999999999999999999998664

>PRK11689 aromatic amino acid exporter; Provisional

Probab=96.83  E-value=0.0046  Score=62.11  Aligned_cols=78  Identities=17%  Similarity=0.187  Sum_probs=62.8

Q ss_pred             CChHHHHHHHHHHHHHHHHHHHHHH--hhccchHHHHHHHhhHHHHHHHHHHHhcCCCCCccchhhHHHHHHHHHHhhee
Q psy16816        180 YNIPQVAKVAFVFSFLRFGAEYTFT--LLGAEAGTVALIYSSSSVLTLLICAFFPSSSSDKFSLSKCVTVCISVCGLILV  257 (470)
Q Consensus       180 l~~~~~~~l~~~~~~l~~~~n~~~~--L~~tsvs~atiL~stsPvft~lla~lf~~~~~ek~s~~k~igvll~~~GVvli  257 (470)
                      .+...+..+. ..+..-.++.++|+  +++++++.++++.+..|++..+++++++   +|+++..+++|.++.++|+.+.
T Consensus       210 ~~~~~~~~l~-~~~~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~l---gE~~~~~~~iG~~lI~~gv~~~  285 (295)
T PRK11689        210 FSLPAIIKLL-LAAAAMGFGYAAWNVGILHGNMTLLATASYFTPVLSAALAALLL---STPLSFSFWQGVAMVTAGSLLC  285 (295)
T ss_pred             CCHHHHHHHH-HHHHHHHHHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHh---CCCCcHHHHHHHHHHHHhHHHH
Confidence            3444443433 33444455677777  9999999999999999999999999999   9999999999999999999877


Q ss_pred             eecC
Q psy16816        258 TISD  261 (470)
Q Consensus       258 ~~~~  261 (470)
                      ...+
T Consensus       286 ~~~~  289 (295)
T PRK11689        286 WLAT  289 (295)
T ss_pred             hhhH
Confidence            5543

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=96.79  E-value=0.013  Score=50.33  Aligned_cols=66  Identities=12%  Similarity=0.017  Sum_probs=50.0

Q ss_pred             HHHHHHHHHHHHHHhhchhHHH-HHHHhHHHHHHHHHHHHhCCCCCHHHHhHHHHHHHHHHHHHhhh
Q psy16816        349 GSVLTETLWLWGMLLTSPLIAT-LGLGLIVPLSMIANTSLYHVTYPRLFYVGAVPVVFAFVASILLA  414 (470)
Q Consensus       349 ~s~ls~~l~~~ai~~tspl~~t-v~~~l~iPla~i~~~l~~ge~~s~~~iiG~~lIl~g~~l~~~~~  414 (470)
                      +-.++++++..++++..-.++= +-..+.+....+.+++++||++++.+++|.++|++|++..+..+
T Consensus        39 ~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~~  105 (110)
T PRK09541         39 CYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLLS  105 (110)
T ss_pred             HHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            4556788888888764433331 11224556678899999999999999999999999999998664

>PRK13499 rhamnose-proton symporter; Provisional

Probab=96.48  E-value=0.062  Score=55.30  Aligned_cols=141  Identities=11%  Similarity=0.141  Sum_probs=85.0

Q ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhcc-cccccCCCHHHHHHHHHHH
Q psy16816        268 HIPSGSFLSLVSALFYSLYIVFLRRLEHEEKLDIVLFYGFVGLYNCLLLWPLFFLLHYNS-WEVFSLPDRDQWVILLIEG  346 (470)
Q Consensus       268 ~~~~G~llaL~sAl~~Al~~vl~r~l~~~~~~~~~~~~g~vglf~l~~l~p~~~~l~~~~-~e~~~~p~~~~~~~ll~~g  346 (470)
                      +...|.++.+++++||+.+.+-+|+.++   .+.-.|.-..|++..++.......+.... .+.....+...+..-++.|
T Consensus         4 ~~~~G~~~~~i~~~~~GS~~~p~K~~k~---w~wE~~W~v~gi~~wl~~~~~~g~~~~~~f~~~~~~~~~~~~~~~~l~G   80 (345)
T PRK13499          4 AIILGIIWHLIGGASSGSFYAPFKKVKK---WSWETMWSVGGIFSWLILPWLIAALLLPDFWAYYSSFSGSTLLPVFLFG   80 (345)
T ss_pred             hhHHHHHHHHHHHHHhhcccccccccCC---CchhHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhcCHHHHHHHHHHH
Confidence            4578999999999999999999988664   33222332333333332221111111111 1223333455666666677


Q ss_pred             HHHHHHHHHHHHHHHHhhchhH-HHHHHHhHHHHHHHHHHHHhCCCC-------CHHHHhHHHHHHHHHHHHHh
Q psy16816        347 LIGSVLTETLWLWGMLLTSPLI-ATLGLGLIVPLSMIANTSLYHVTY-------PRLFYVGAVPVVFAFVASIL  412 (470)
Q Consensus       347 il~s~ls~~l~~~ai~~tspl~-~tv~~~l~iPla~i~~~l~~ge~~-------s~~~iiG~~lIl~g~~l~~~  412 (470)
                      ++ -.+++..+..++++.+-.. ..+...++..++.+++.+++||-.       ...-++|.+++++|+++..+
T Consensus        81 ~~-W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s~  153 (345)
T PRK13499         81 AL-WGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVGR  153 (345)
T ss_pred             HH-HHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHH
Confidence            76 7788888888887633221 122222444446667777887532       24578899999999999998

>PRK11431 multidrug efflux system protein; Provisional

Probab=96.45  E-value=0.027  Score=48.03  Aligned_cols=66  Identities=14%  Similarity=0.088  Sum_probs=49.9

Q ss_pred             HHHHHHHHHHHHHHhhchhHH-HHHHHhHHHHHHHHHHHHhCCCCCHHHHhHHHHHHHHHHHHHhhh
Q psy16816        349 GSVLTETLWLWGMLLTSPLIA-TLGLGLIVPLSMIANTSLYHVTYPRLFYVGAVPVVFAFVASILLA  414 (470)
Q Consensus       349 ~s~ls~~l~~~ai~~tspl~~-tv~~~l~iPla~i~~~l~~ge~~s~~~iiG~~lIl~g~~l~~~~~  414 (470)
                      +-.+++++...+++..+-.++ ++-..+.+....+.+++++||++++.+++|.++|+.|++..+..+
T Consensus        38 ~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~l~~  104 (105)
T PRK11431         38 AMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLKLST  104 (105)
T ss_pred             HHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhhccC
Confidence            346778888888876443332 122225556688899999999999999999999999999988653

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=96.45  E-value=0.015  Score=58.21  Aligned_cols=61  Identities=11%  Similarity=0.049  Sum_probs=54.4

Q ss_pred             HHHHHHH--hhccchHHHHHHHhhHHHHHHHHHHHhcCCCCCccchhhHHHHHHHHHHhheeeecC
Q psy16816        198 GAEYTFT--LLGAEAGTVALIYSSSSVLTLLICAFFPSSSSDKFSLSKCVTVCISVCGLILVTISD  261 (470)
Q Consensus       198 ~~n~~~~--L~~tsvs~atiL~stsPvft~lla~lf~~~~~ek~s~~k~igvll~~~GVvli~~~~  261 (470)
                      ++.++|+  +++.+++.++++.++.|+++.+++++++   +|+++..+++|.++.++|++......
T Consensus       221 ~~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~l---gE~~~~~~~iG~~lIl~~~~~~~~~~  283 (293)
T PRK10532        221 LPYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFL---GETLTLIQWLALGAIIAASMGSTLTI  283 (293)
T ss_pred             HHHHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHh---CCCCcHHHHHHHHHHHHHHHHHHhcC
Confidence            3444555  9999999999999999999999999999   99999999999999999998886543

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=96.44  E-value=0.17  Score=52.29  Aligned_cols=75  Identities=12%  Similarity=0.039  Sum_probs=63.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHhHHHH-HHHHHHHHhCCCCCHHHHhHHHHHHHHHHHHHhh
Q psy16816        337 DQWVILLIEGLIGSVLTETLWLWGMLLTSPLIATLGLGLIVPL-SMIANTSLYHVTYPRLFYVGAVPVVFAFVASILL  413 (470)
Q Consensus       337 ~~~~~ll~~gil~s~ls~~l~~~ai~~tspl~~tv~~~l~iPl-a~i~~~l~~ge~~s~~~iiG~~lIl~g~~l~~~~  413 (470)
                      ..|..++..|+++.. .+...+.+++++++..+++..+ ..|+ .++++.++++|+++..+++|.+++++|+.+....
T Consensus       112 ~~~~~llp~gl~~~~-~~~~~~~sl~~~svs~~~iika-~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~~~  187 (350)
T PTZ00343        112 LFLKNFLPQGLCHLF-VHFGAVISMGLGAVSFTHVVKA-AEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASVK  187 (350)
T ss_pred             HHHHHHHHHHHHHHH-HHHHHHHHHhhccHHHHHHHHH-hhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHheecc
Confidence            466778888887544 4677778999999999888776 5566 9999999999999999999999999999998753

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=96.41  E-value=0.026  Score=57.08  Aligned_cols=121  Identities=16%  Similarity=0.177  Sum_probs=73.5

Q ss_pred             ccchHHHHHHHHHHHHHHHHHHHHHHhc-cCCchhHHHHHHHHHHHHHHHHHHHHHHHhhcccccccCCCHHHHHHHHHH
Q psy16816        267 LHIPSGSFLSLVSALFYSLYIVFLRRLE-HEEKLDIVLFYGFVGLYNCLLLWPLFFLLHYNSWEVFSLPDRDQWVILLIE  345 (470)
Q Consensus       267 ~~~~~G~llaL~sAl~~Al~~vl~r~l~-~~~~~~~~~~~g~vglf~l~~l~p~~~~l~~~~~e~~~~p~~~~~~~ll~~  345 (470)
                      .+..+|.++++.|+++.|+..+++|+-. ++++.+...  + .+.      .+.           +.  ++..|.-+   
T Consensus         3 ~~~~iGv~lav~ss~~~~~g~~lqk~~~~r~~~~~~~~--~-~~~------~~~-----------l~--~~~W~~G~---   57 (300)
T PF05653_consen    3 TDFYIGVLLAVVSSIFIAVGFNLQKKSHLRLPRGSLRA--G-SGG------RSY-----------LR--RPLWWIGL---   57 (300)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccc--c-chh------hHH-----------Hh--hHHHHHHH---
Confidence            4568999999999999999999996532 221100000  0 000      000           00  01111111   


Q ss_pred             HHHHHHHHHHHHHHHHHhhchhHHHHHHHhHHHHHHHHHHHHhCCCCCHHHHhHHHHHHHHHHHHHhhh
Q psy16816        346 GLIGSVLTETLWLWGMLLTSPLIATLGLGLIVPLSMIANTSLYHVTYPRLFYVGAVPVVFAFVASILLA  414 (470)
Q Consensus       346 gil~s~ls~~l~~~ai~~tspl~~tv~~~l~iPla~i~~~l~~ge~~s~~~iiG~~lIl~g~~l~~~~~  414 (470)
                        +..+++..+.+.++.......++-...+.+.++++++..+++|+++...++|.+++++|..++....
T Consensus        58 --~~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~~~  124 (300)
T PF05653_consen   58 --LLMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVIFA  124 (300)
T ss_pred             --HHHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEEeC
Confidence              1122333344445555445455544557778899999999999999999999999999998766443

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=96.34  E-value=0.037  Score=47.10  Aligned_cols=65  Identities=11%  Similarity=0.047  Sum_probs=49.3

Q ss_pred             HHHHHHHHHHHHHhhchhHH-HHHHHhHHHHHHHHHHHHhCCCCCHHHHhHHHHHHHHHHHHHhhh
Q psy16816        350 SVLTETLWLWGMLLTSPLIA-TLGLGLIVPLSMIANTSLYHVTYPRLFYVGAVPVVFAFVASILLA  414 (470)
Q Consensus       350 s~ls~~l~~~ai~~tspl~~-tv~~~l~iPla~i~~~l~~ge~~s~~~iiG~~lIl~g~~l~~~~~  414 (470)
                      -.+++++..++++...-.++ ++-....+....+.++++++|++++.+++|.+++++|++..+..+
T Consensus        40 ~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~~s  105 (106)
T COG2076          40 YGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKLGS  105 (106)
T ss_pred             HHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhhcC
Confidence            45678888888887433222 111224556678899999999999999999999999999998764

>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]

Probab=96.24  E-value=0.0011  Score=64.15  Aligned_cols=217  Identities=16%  Similarity=0.098  Sum_probs=144.4

Q ss_pred             CChHHHHHHHHHHHHHHHHHHHHHH--hhccchHHHHHHHhhH-HHHHHHHHHHhcCCCCCccchhh----HHHHHHHHH
Q psy16816        180 YNIPQVAKVAFVFSFLRFGAEYTFT--LLGAEAGTVALIYSSS-SVLTLLICAFFPSSSSDKFSLSK----CVTVCISVC  252 (470)
Q Consensus       180 l~~~~~~~l~~~~~~l~~~~n~~~~--L~~tsvs~atiL~sts-Pvft~lla~lf~~~~~ek~s~~k----~igvll~~~  252 (470)
                      ....+.+..++.-+.+|...+..-+  .++..++.+.-+++-+ -+-+-+++++.+   +|--+..+    .+++++.++
T Consensus        53 ~~T~~~~iv~~isG~~Ws~GQ~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f---~EW~t~~~~IlG~iAlilivi  129 (288)
T COG4975          53 ELTLTIFIVGFISGAFWSFGQANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVF---HEWTTPTQIILGFIALILIVI  129 (288)
T ss_pred             ccchhhHHHHHHhhhHhhhhhhhhhhheeeeeeeccccccchhhHhhceeeeEEEE---eccCcchhHHHHHHHHHHHHH
Confidence            3444577788888999988776666  9999999888887744 566778899988   88877654    567888999


Q ss_pred             HhheeeecCccc----ccccchHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccc
Q psy16816        253 GLILVTISDVYM----EHLHIPSGSFLSLVSALFYSLYIVFLRRLEHEEKLDIVLFYGFVGLYNCLLLWPLFFLLHYNSW  328 (470)
Q Consensus       253 GVvli~~~~~~~----~~~~~~~G~llaL~sAl~~Al~~vl~r~l~~~~~~~~~~~~g~vglf~l~~l~p~~~~l~~~~~  328 (470)
                      |+.+.++.|...    +.++.-.|....+.|.+.|-.|.++.+..+- +..+..+... +|.      ....+.+.+.+.
T Consensus       130 G~~lTs~~~~~nk~~~~~~n~kkgi~~L~iSt~GYv~yvvl~~~f~v-~g~saiLPqA-iGM------v~~ali~~~~~~  201 (288)
T COG4975         130 GIYLTSKQDRNNKEEENPSNLKKGIVILLISTLGYVGYVVLFQLFDV-DGLSAILPQA-IGM------VIGALILGFFKM  201 (288)
T ss_pred             hheEeeeeccccccccChHhhhhheeeeeeeccceeeeEeeeccccc-cchhhhhHHH-HHH------HHHHHHHhhccc
Confidence            999999887522    1234567889999999999999999876652 2233322222 222      111122222222


Q ss_pred             ccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHhHHHHHHHHHHHHhCCCCCHHH----HhHHHHHH
Q psy16816        329 EVFSLPDRDQWVILLIEGLIGSVLTETLWLWGMLLTSPLIATLGLGLIVPLSMIANTSLYHVTYPRLF----YVGAVPVV  404 (470)
Q Consensus       329 e~~~~p~~~~~~~ll~~gil~s~ls~~l~~~ai~~tspl~~tv~~~l~iPla~i~~~l~~ge~~s~~~----iiG~~lIl  404 (470)
                      |   ....+....-+.-|++ ..+++.+++++..+.+-.++=...-+.+.++.+.+.++++|+-+..+    ++|.++++
T Consensus       202 ~---~~~~K~t~~nii~G~~-Wa~GNl~ml~a~~~~GvAt~FSlSQlgViisTiGGIl~L~ekKtkkEm~~v~iGiiliv  277 (288)
T COG4975         202 E---KRFNKYTWLNIIPGLI-WAIGNLFMLLAAQKVGVATSFSLSQLGVIISTIGGILFLGEKKTKKEMVYVIIGIILIV  277 (288)
T ss_pred             c---cchHHHHHHHHhhHHH-HHhhHHHHHHhhhhhceeeeeeHhhheeeeeecceEEEEeccCchhhhhhhhhhHHHHH
Confidence            2   2233333334455666 67788888888776433322111225666799999999999988654    67888888


Q ss_pred             HHHHHHH
Q psy16816        405 FAFVASI  411 (470)
Q Consensus       405 ~g~~l~~  411 (470)
                      .|..+..
T Consensus       278 vgai~lg  284 (288)
T COG4975         278 VGAILLG  284 (288)
T ss_pred             HHhhhhh
Confidence            8877654

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=95.99  E-value=0.066  Score=45.96  Aligned_cols=62  Identities=15%  Similarity=0.054  Sum_probs=47.1

Q ss_pred             HHHHHHHHHHHHHhhchhHH-HHHHHhHHHHHHHHHHHHhCCCCCHHHHhHHHHHHHHHHHHH
Q psy16816        350 SVLTETLWLWGMLLTSPLIA-TLGLGLIVPLSMIANTSLYHVTYPRLFYVGAVPVVFAFVASI  411 (470)
Q Consensus       350 s~ls~~l~~~ai~~tspl~~-tv~~~l~iPla~i~~~l~~ge~~s~~~iiG~~lIl~g~~l~~  411 (470)
                      -.+++++...+++...-.++ ++-....+....+.+++++||++++.+++|.++|+.|++..+
T Consensus        45 ~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~lk  107 (109)
T PRK10650         45 VLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMIK  107 (109)
T ss_pred             HHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhc
Confidence            45678888888876433332 111224555678899999999999999999999999999876

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=95.92  E-value=0.04  Score=48.13  Aligned_cols=65  Identities=12%  Similarity=0.184  Sum_probs=53.5

Q ss_pred             HHHHHHHHHHH--hhccchHHHHHHH-hhHHHHHHHHHHHhcCCCCCccchhhHHHHHHHHHHhheeeecC
Q psy16816        194 FLRFGAEYTFT--LLGAEAGTVALIY-SSSSVLTLLICAFFPSSSSDKFSLSKCVTVCISVCGLILVTISD  261 (470)
Q Consensus       194 ~l~~~~n~~~~--L~~tsvs~atiL~-stsPvft~lla~lf~~~~~ek~s~~k~igvll~~~GVvli~~~~  261 (470)
                      .++.++.+++.  +++.|.+.+=.+- ...-+.+.+++++++   +|++++.|++|+.+.++|++++-..+
T Consensus        38 ~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f---~E~~s~~~~~gi~lIi~GVi~l~l~~  105 (120)
T PRK10452         38 VMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLF---DESLSLMKIAGLTTLVAGIVLIKSGT  105 (120)
T ss_pred             HHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHh---CCCCCHHHHHHHHHHHHHHHHhhcCC
Confidence            33444445555  9999999998885 577899999999999   99999999999999999999886544

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=95.86  E-value=0.044  Score=47.13  Aligned_cols=64  Identities=16%  Similarity=0.239  Sum_probs=52.4

Q ss_pred             HHHHHHHHHHH--hhccchHHHHHHHh-hHHHHHHHHHHHhcCCCCCccchhhHHHHHHHHHHhheeeec
Q psy16816        194 FLRFGAEYTFT--LLGAEAGTVALIYS-SSSVLTLLICAFFPSSSSDKFSLSKCVTVCISVCGLILVTIS  260 (470)
Q Consensus       194 ~l~~~~n~~~~--L~~tsvs~atiL~s-tsPvft~lla~lf~~~~~ek~s~~k~igvll~~~GVvli~~~  260 (470)
                      ..+.++.++..  ++..|.+.+=.+-+ ..-+.+.+++++++   +|++++.+++|+.+.++|++++-..
T Consensus        38 ~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f---~e~~~~~~~~gi~lIi~GVi~l~l~  104 (110)
T PRK09541         38 ICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFF---GQRLDLPAIIGMMLICAGVLVINLL  104 (110)
T ss_pred             HHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHh---CCCCCHHHHHHHHHHHHHHHHHhcC
Confidence            33444444444  99999999988754 67888899999999   9999999999999999999998543

>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family

Probab=95.81  E-value=2.7  Score=43.09  Aligned_cols=228  Identities=15%  Similarity=0.161  Sum_probs=124.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHH--hhccchHHHHHHHh-hHHHHHHHHHHHhcCCC----CCccchhhHHHHHHHHHHhhee
Q psy16816        185 VAKVAFVFSFLRFGAEYTFT--LLGAEAGTVALIYS-SSSVLTLLICAFFPSSS----SDKFSLSKCVTVCISVCGLILV  257 (470)
Q Consensus       185 ~~~l~~~~~~l~~~~n~~~~--L~~tsvs~atiL~s-tsPvft~lla~lf~~~~----~ek~s~~k~igvll~~~GVvli  257 (470)
                      ++...+.++++|.+....|.  .+|+-+|..+-+.- +.-++-.++-.++...-    ..+-....++|++++++|+++.
T Consensus        72 ~l~~~~l~G~lWGIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~  151 (344)
T PF06379_consen   72 TLFWTFLFGVLWGIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAIC  151 (344)
T ss_pred             HHHHHHHHHHHHhcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHH
Confidence            66677899999999999998  88877665543332 33333333433332000    1122346899999999999999


Q ss_pred             eecCccc--------ccccchHHHHHHHHHHHHHHHHHHHHHH---hcc-----C-Cch---hHHHHHHHHHHHHHHHHH
Q psy16816        258 TISDVYM--------EHLHIPSGSFLSLVSALFYSLYIVFLRR---LEH-----E-EKL---DIVLFYGFVGLYNCLLLW  317 (470)
Q Consensus       258 ~~~~~~~--------~~~~~~~G~llaL~sAl~~Al~~vl~r~---l~~-----~-~~~---~~~~~~g~vglf~l~~l~  317 (470)
                      .+.....        .+.+...|.+++++|.+..|.+.+-...   ..+     + ++.   .+...+-+.|-+..-+.+
T Consensus       152 g~AG~~Ke~~~~~~~~efn~~kGl~iAv~sGv~Sa~fn~g~~ag~pi~~~a~a~G~~~l~~~l~~~vvv~~GGf~tN~~y  231 (344)
T PF06379_consen  152 GKAGSMKEKELGEEAKEFNFKKGLIIAVLSGVMSACFNFGLDAGKPIHEAAVAAGVNPLYANLPVYVVVLWGGFITNLIY  231 (344)
T ss_pred             hHHHHhhhhhhccchhhhhhhhhHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHcCCCcHHHhCchhhhhhhhHHHHHHHH
Confidence            7654321        1244678999999999999998877621   111     0 111   111122223333222223


Q ss_pred             HHHHHHhhccc---ccccC--CC-HHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhHH----HHHHHhHHHHHHHHHHHH
Q psy16816        318 PLFFLLHYNSW---EVFSL--PD-RDQWVILLIEGLIGSVLTETLWLWGMLLTSPLIA----TLGLGLIVPLSMIANTSL  387 (470)
Q Consensus       318 p~~~~l~~~~~---e~~~~--p~-~~~~~~ll~~gil~s~ls~~l~~~ai~~tspl~~----tv~~~l~iPla~i~~~l~  387 (470)
                      ...-...-...   .++..  |. ...+..-+..|++ -...+++|.++-.+..+...    .+-+++.+.++-+++.+.
T Consensus       232 c~~~l~~~k~~s~~~d~~~~~~~~~~N~~~~aLaG~l-Wy~qfffYg~G~s~lg~~~~~~sW~i~ma~~vl~snvwGl~l  310 (344)
T PF06379_consen  232 CLILLAKNKNWSWKGDYSVAKPPLLKNYLFCALAGVL-WYSQFFFYGMGESKLGASGPFSSWAIHMALIVLFSNVWGLIL  310 (344)
T ss_pred             HHHHHhhcCCCccccccccccchhHHHHHHHHHHHHH-HHHHHHHHHHHHHHhcCccccHHHHHHHHHHHHHHHHHHHHH
Confidence            32211110111   12221  11 2333344444444 55555555555544443211    222445555677788776


Q ss_pred             h-----CCCCCHHHHhHHHHHHHHHHHHHhh
Q psy16816        388 Y-----HVTYPRLFYVGAVPVVFAFVASILL  413 (470)
Q Consensus       388 ~-----ge~~s~~~iiG~~lIl~g~~l~~~~  413 (470)
                      .     +.+.-...++|.++++++.+++-+.
T Consensus       311 kEWKg~s~kt~~vl~~G~~vlI~s~~ivG~G  341 (344)
T PF06379_consen  311 KEWKGASKKTIRVLVLGIAVLILSVVIVGYG  341 (344)
T ss_pred             HHhccCCcccHHHHHHHHHHHHHHHHHHhcc
Confidence            4     1333455689999999999888654

This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=95.76  E-value=0.28  Score=49.47  Aligned_cols=74  Identities=14%  Similarity=0.020  Sum_probs=58.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHhHHHHHHHHHHHHhCCCCCHHHHhHHHHHHHHHHHHHhhhcc
Q psy16816        342 LLIEGLIGSVLTETLWLWGMLLTSPLIATLGLGLIVPLSMIANTSLYHVTYPRLFYVGAVPVVFAFVASILLAQM  416 (470)
Q Consensus       342 ll~~gil~s~ls~~l~~~ai~~tspl~~tv~~~l~iPla~i~~~l~~ge~~s~~~iiG~~lIl~g~~l~~~~~~~  416 (470)
                      .+..+++ ..++..+-+.++++.+--+-.+.-+..++..++++.++++++++..++++.+++.+|+.+....+.+
T Consensus        67 ~~~~~~~-~~~~~~~~~~al~~i~~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~  140 (303)
T PF08449_consen   67 YAILSFL-FFLASVLSNAALKYISYPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSS  140 (303)
T ss_pred             HHHHHHH-HHHHHHHHHHHHHhCChHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeecccc
Confidence            3444444 5666777788888876666666666665668999999999999999999999999999999987544

; GO: 0055085 transmembrane transport

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=95.19  E-value=0.12  Score=44.35  Aligned_cols=60  Identities=8%  Similarity=0.180  Sum_probs=48.9

Q ss_pred             HHHHHHHHHH--hhccchHHHHHHHh-hHHHHHHHHHHHhcCCCCCccchhhHHHHHHHHHHhhee
Q psy16816        195 LRFGAEYTFT--LLGAEAGTVALIYS-SSSVLTLLICAFFPSSSSDKFSLSKCVTVCISVCGLILV  257 (470)
Q Consensus       195 l~~~~n~~~~--L~~tsvs~atiL~s-tsPvft~lla~lf~~~~~ek~s~~k~igvll~~~GVvli  257 (470)
                      .+.++.|+..  +++.|++.+=.+-+ ..-+.+.+.+++++   +|++++.|++++.+.++|++++
T Consensus        44 ~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f---~e~~~~~~~~gi~lIi~GVi~l  106 (109)
T PRK10650         44 AVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILF---GQRLNRKGWIGLVLLLAGMVMI  106 (109)
T ss_pred             HHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHc---CCCCCHHHHHHHHHHHHHHHHh
Confidence            3333444444  99999999877666 45788899999999   9999999999999999999876

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=95.04  E-value=0.07  Score=46.06  Aligned_cols=70  Identities=20%  Similarity=0.179  Sum_probs=56.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHH-hhccchHHHHHHH-hhHHHHHHHHHHHhcCCCCCccchhhHHHHHHHHHHhhee
Q psy16816        185 VAKVAFVFSFLRFGAEYTFT-LLGAEAGTVALIY-SSSSVLTLLICAFFPSSSSDKFSLSKCVTVCISVCGLILV  257 (470)
Q Consensus       185 ~~~l~~~~~~l~~~~n~~~~-L~~tsvs~atiL~-stsPvft~lla~lf~~~~~ek~s~~k~igvll~~~GVvli  257 (470)
                      ..++.+++.+=-..+-++|. +...+.|.+.-+. +++-+||++.+++++   +|..+++.++|+++.+.|+.+.
T Consensus        41 n~~y~ipf~lNq~GSv~f~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lg---e~~~~~~~~~G~~Li~~Gv~Lc  112 (113)
T PF10639_consen   41 NPKYIIPFLLNQSGSVLFFLLLGSADLSLAVPIANSLAFVFTALTGWLLG---EEVISRRTWLGMALILAGVALC  112 (113)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHhcCCceeeehHHhHHHHHHHHHHHHHhc---CcccchhHHHHHHHHHcCeeee
Confidence            34455555554444555555 9999999999995 788999999999998   7888899999999999999874

Many members are annotated as potential transmembrane proteins.

>PRK11431 multidrug efflux system protein; Provisional

Probab=94.93  E-value=0.21  Score=42.65  Aligned_cols=59  Identities=12%  Similarity=0.181  Sum_probs=49.1

Q ss_pred             HHHHHHHH--hhccchHHHHHHHh-hHHHHHHHHHHHhcCCCCCccchhhHHHHHHHHHHhheee
Q psy16816        197 FGAEYTFT--LLGAEAGTVALIYS-SSSVLTLLICAFFPSSSSDKFSLSKCVTVCISVCGLILVT  258 (470)
Q Consensus       197 ~~~n~~~~--L~~tsvs~atiL~s-tsPvft~lla~lf~~~~~ek~s~~k~igvll~~~GVvli~  258 (470)
                      ..+.|+..  ++..|++.+=.+-. ..-+.+.+++++++   +|++++.|++++.+.++|++.+-
T Consensus        40 ~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f---~e~~~~~~~~gi~lIi~GVv~l~  101 (105)
T PRK11431         40 IVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLL---GESASPARLLSLALIVAGIIGLK  101 (105)
T ss_pred             HHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHh---CCCCCHHHHHHHHHHHHHHHhhh
Confidence            33444444  89999999877666 56788899999999   99999999999999999999874

>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family

Probab=94.77  E-value=0.65  Score=47.43  Aligned_cols=143  Identities=10%  Similarity=0.146  Sum_probs=84.4

Q ss_pred             ccchHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccccc-ccCCCHHHHHHHHHH
Q psy16816        267 LHIPSGSFLSLVSALFYSLYIVFLRRLEHEEKLDIVLFYGFVGLYNCLLLWPLFFLLHYNSWEV-FSLPDRDQWVILLIE  345 (470)
Q Consensus       267 ~~~~~G~llaL~sAl~~Al~~vl~r~l~~~~~~~~~~~~g~vglf~l~~l~p~~~~l~~~~~e~-~~~p~~~~~~~ll~~  345 (470)
                      .....|+++..+++++-+.+++=.||+++   .+.-.|.-..|+++.++.-+....+...+... +...+...+......
T Consensus         3 ~~ii~Gii~h~iGg~~~~sfy~P~kkvk~---WsWEs~Wlv~gi~swli~P~~~a~l~ip~~~~i~~~~~~~~l~~~~l~   79 (344)
T PF06379_consen    3 SAIILGIIFHAIGGFASGSFYVPFKKVKG---WSWESYWLVQGIFSWLIVPWLWALLAIPDFFSIYSATPASTLFWTFLF   79 (344)
T ss_pred             chHHHHHHHHHHHHHHhhhhccchhhcCC---ccHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHhCChhHHHHHHHH
Confidence            34588999999999999999999999986   33333343444544443322222222222211 222222344555666


Q ss_pred             HHHHHHHHHHHHHHHHHhhchhHH-HHHHHhHHHHHHHHHHHHhC-------CCCCHHHHhHHHHHHHHHHHHHhh
Q psy16816        346 GLIGSVLTETLWLWGMLLTSPLIA-TLGLGLIVPLSMIANTSLYH-------VTYPRLFYVGAVPVVFAFVASILL  413 (470)
Q Consensus       346 gil~s~ls~~l~~~ai~~tspl~~-tv~~~l~iPla~i~~~l~~g-------e~~s~~~iiG~~lIl~g~~l~~~~  413 (470)
                      |++ -.++...|-.++++.+-..+ ++.+.++..+..++-.++.|       ++-....++|.++.++|+.+..+.
T Consensus        80 G~l-WGIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~A  154 (344)
T PF06379_consen   80 GVL-WGIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGKA  154 (344)
T ss_pred             HHH-HhcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhHH
Confidence            776 77777888888887433221 22222333444444344433       223456899999999999998865

This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=94.71  E-value=0.2  Score=42.69  Aligned_cols=52  Identities=21%  Similarity=0.284  Sum_probs=45.6

Q ss_pred             hhccchHHHHHHHh-hHHHHHHHHHHHhcCCCCCccchhhHHHHHHHHHHhheeee
Q psy16816        205 LLGAEAGTVALIYS-SSSVLTLLICAFFPSSSSDKFSLSKCVTVCISVCGLILVTI  259 (470)
Q Consensus       205 L~~tsvs~atiL~s-tsPvft~lla~lf~~~~~ek~s~~k~igvll~~~GVvli~~  259 (470)
                      ++++|++.+=.+-+ .--+.|.+.+++++   +|+++..|++++.+.++|++.+-.
T Consensus        51 lk~ipvgvAYAiW~GiG~v~~~l~g~~~f---~E~l~~~~~~gl~LiiaGvi~Lk~  103 (106)
T COG2076          51 LKTIPLGVAYAIWTGIGIVGTALVGVLLF---GESLSLIKLLGLALILAGVIGLKL  103 (106)
T ss_pred             HhhCchHHHHHHHHHHHHHHHHHHHHHhc---CCcCCHHHHHHHHHHHHHHHHhhh
Confidence            99999999866655 44788999999999   999999999999999999987643

>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins

Probab=94.54  E-value=1.3  Score=39.56  Aligned_cols=130  Identities=15%  Similarity=0.132  Sum_probs=71.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhcc--CCchhHHHHHHHHHHHHHHHHHHHHHHHhhcccccccCCCHHHHHHHHHHHHHH
Q psy16816        272 GSFLSLVSALFYSLYIVFLRRLEH--EEKLDIVLFYGFVGLYNCLLLWPLFFLLHYNSWEVFSLPDRDQWVILLIEGLIG  349 (470)
Q Consensus       272 G~llaL~sAl~~Al~~vl~r~l~~--~~~~~~~~~~g~vglf~l~~l~p~~~~l~~~~~e~~~~p~~~~~~~ll~~gil~  349 (470)
                      ..++++++..+-++...+.-++.+  .++....+.--.+|...++..+   +.......+  ..+....|.+  .-|+++
T Consensus         2 ~~lla~~aG~~i~~q~~~N~~L~~~~gs~~~as~i~~~~G~i~~~i~~---~~~~~~~~~--~~~~~p~w~~--lGG~lG   74 (138)
T PF04657_consen    2 YILLALLAGALIALQAAFNGQLGKALGSPLVASFISFGVGFILLLIIL---LITGRPSLA--SLSSVPWWAY--LGGLLG   74 (138)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHH---HHhcccccc--hhccCChHHh--ccHHHH
Confidence            356788888888888777733333  2244333333334443222211   111111111  1111112222  256664


Q ss_pred             HHHHHHHHHHHHHhhchhHHHHHHHh-HHHHHHHHHHH----HhCCCCCHHHHhHHHHHHHHHHH
Q psy16816        350 SVLTETLWLWGMLLTSPLIATLGLGL-IVPLSMIANTS----LYHVTYPRLFYVGAVPVVFAFVA  409 (470)
Q Consensus       350 s~ls~~l~~~ai~~tspl~~tv~~~l-~iPla~i~~~l----~~ge~~s~~~iiG~~lIl~g~~l  409 (470)
                      . +.-++..+.+.+.++..++..... +...+++.|.+    .-++++++..++|.+++++|+++
T Consensus        75 ~-~~V~~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L  138 (138)
T PF04657_consen   75 V-FFVLSNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL  138 (138)
T ss_pred             H-HHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence            3 346777778888777665544333 33337777775    34578999999999999999863

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=94.03  E-value=0.23  Score=41.16  Aligned_cols=55  Identities=11%  Similarity=0.034  Sum_probs=29.7

Q ss_pred             HHHHHHHHHHHHHHhhchhHH-HHHHHhHHHHHHHHHHHHhCCCCCHHHHhHHHHH
Q psy16816        349 GSVLTETLWLWGMLLTSPLIA-TLGLGLIVPLSMIANTSLYHVTYPRLFYVGAVPV  403 (470)
Q Consensus       349 ~s~ls~~l~~~ai~~tspl~~-tv~~~l~iPla~i~~~l~~ge~~s~~~iiG~~lI  403 (470)
                      +-.++++++.+++++....++ ++-..+.+....+.+.+++||++++.+++|.++|
T Consensus        38 ~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI   93 (93)
T PF00893_consen   38 GYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI   93 (93)
T ss_dssp             HHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred             HHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence            456778899999998554444 2222355666888999999999999999999876

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=94.03  E-value=0.32  Score=47.69  Aligned_cols=78  Identities=12%  Similarity=0.086  Sum_probs=66.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHhHHHHHHHHHHHHhCCCCCHHHHhHHHHHHHHHHHHHhhhcc
Q psy16816        338 QWVILLIEGLIGSVLTETLWLWGMLLTSPLIATLGLGLIVPLSMIANTSLYHVTYPRLFYVGAVPVVFAFVASILLAQM  416 (470)
Q Consensus       338 ~~~~ll~~gil~s~ls~~l~~~ai~~tspl~~tv~~~l~iPla~i~~~l~~ge~~s~~~iiG~~lIl~g~~l~~~~~~~  416 (470)
                      ....+.+-+++ -.+.+.+.+.++...+|.+-.+...+.++.++++.+++++++++..+|++..++++|+.++......
T Consensus        16 ~~~~~~vPA~l-Y~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~   93 (244)
T PF04142_consen   16 DTLKLAVPALL-YAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQ   93 (244)
T ss_pred             HHHHHHHHHHH-HHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCcc
Confidence            34444555555 5667888889999999998888888999999999999999999999999999999999999876544

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=92.80  E-value=0.38  Score=39.87  Aligned_cols=52  Identities=19%  Similarity=0.112  Sum_probs=28.6

Q ss_pred             HHHHHHHHHH--hhccchHHHHHH-HhhHHHHHHHHHHHhcCCCCCccchhhHHHHHH
Q psy16816        195 LRFGAEYTFT--LLGAEAGTVALI-YSSSSVLTLLICAFFPSSSSDKFSLSKCVTVCI  249 (470)
Q Consensus       195 l~~~~n~~~~--L~~tsvs~atiL-~stsPvft~lla~lf~~~~~ek~s~~k~igvll  249 (470)
                      .+.++.+++.  +++.|.+.+=.+ .....+.+.+++.+++   +|+++..|++|+.+
T Consensus        38 ~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f---~E~~s~~~~~gi~l   92 (93)
T PF00893_consen   38 GYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFF---GESLSLSKWLGIGL   92 (93)
T ss_dssp             HHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH-----------HHHHHH
T ss_pred             HHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHh---CCCCCHHHHhheee
Confidence            4555556666  999999999555 5588999999999999   99999999999876

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=91.75  E-value=4.7  Score=36.62  Aligned_cols=36  Identities=6%  Similarity=0.036  Sum_probs=26.3

Q ss_pred             HHHHHHHHHHHHhC----CCCCHHHHhHHHHHHHHHHHHH
Q psy16816        376 IVPLSMIANTSLYH----VTYPRLFYVGAVPVVFAFVASI  411 (470)
Q Consensus       376 ~iPla~i~~~l~~g----e~~s~~~iiG~~lIl~g~~l~~  411 (470)
                      +...+++.|.+=+.    .++++..++|++++++|+++..
T Consensus       106 Qli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~~  145 (150)
T COG3238         106 QLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLAR  145 (150)
T ss_pred             HHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHhc
Confidence            34446666655443    6799999999999999955554

>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function

Probab=91.24  E-value=0.79  Score=45.27  Aligned_cols=36  Identities=14%  Similarity=0.274  Sum_probs=28.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHH
Q psy16816        272 GSFLSLVSALFYSLYIVFLRRLEHEEKLDIVLFYGF  307 (470)
Q Consensus       272 G~llaL~sAl~~Al~~vl~r~l~~~~~~~~~~~~g~  307 (470)
                      |.+.+++|+++++...|=.|+....|.+-.|.+++.
T Consensus         1 G~~a~~va~~~fGs~~vPvK~~~~gDg~~fQw~~~~   36 (254)
T PF07857_consen    1 GYIACIVAVLFFGSNFVPVKKFDTGDGFFFQWVMCS   36 (254)
T ss_pred             CchhHHHHHHHhcccceeeEeccCCCcHHHHHHHHH
Confidence            567789999999999999998887776666666553

The region concerned is approximately 280 residues long.

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=89.26  E-value=1.6  Score=42.89  Aligned_cols=74  Identities=16%  Similarity=0.193  Sum_probs=58.6

Q ss_pred             CChHHHHHHHHHHHHHHHHHHHHHH---hhccchHHHHHHHhhHHHHHHHHHHHhcCCCCCccchhhHHHHHHHHHHhhe
Q psy16816        180 YNIPQVAKVAFVFSFLRFGAEYTFT---LLGAEAGTVALIYSSSSVLTLLICAFFPSSSSDKFSLSKCVTVCISVCGLIL  256 (470)
Q Consensus       180 l~~~~~~~l~~~~~~l~~~~n~~~~---L~~tsvs~atiL~stsPvft~lla~lf~~~~~ek~s~~k~igvll~~~GVvl  256 (470)
                      +.....+.+++..+++--..-|..-   +...|..+..++.+.-|.+..+.+++++   +|+++..||+++...+++.+=
T Consensus       203 l~~p~ll~laLgvavlSSalPYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L---~e~ls~~qwlaI~~ViaAsaG  279 (292)
T COG5006         203 LFSPSLLPLALGVAVLSSALPYSLEMIALRRLPARTFGTLLSLEPALAALSGLIFL---GETLTLIQWLAIAAVIAASAG  279 (292)
T ss_pred             hcChHHHHHHHHHHHHhcccchHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHh---cCCCCHHHHHHHHHHHHHHhc
Confidence            3444566666655555544444443   8999999999999999999999999999   999999999999988877653

>KOG2765|consensus

Probab=88.25  E-value=0.68  Score=47.74  Aligned_cols=76  Identities=7%  Similarity=-0.078  Sum_probs=64.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhchhHHHHHHHhHHHHHHHHHHHHhCCCCCHHHHhHHHHHHHHHHHHHhhhccc
Q psy16816        341 ILLIEGLIGSVLTETLWLWGMLLTSPLIATLGLGLIVPLSMIANTSLYHVTYPRLFYVGAVPVVFAFVASILLAQMA  417 (470)
Q Consensus       341 ~ll~~gil~s~ls~~l~~~ai~~tspl~~tv~~~l~iPla~i~~~l~~ge~~s~~~iiG~~lIl~g~~l~~~~~~~~  417 (470)
                      .-++.+.+ .+++++.++-++..|+....++..+..--+..+++.++.+|++++...+|..+-+.|+++++..+.++
T Consensus       161 ~sl~fc~l-WF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s~~  236 (416)
T KOG2765|consen  161 LSLFFCPL-WFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDSKQ  236 (416)
T ss_pred             HHHHHHHH-HHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEeccccc
Confidence            44555666 78889999999999988888876666666688999999999999999999999999999999886654

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=84.64  E-value=2.5  Score=42.08  Aligned_cols=68  Identities=13%  Similarity=0.085  Sum_probs=55.1

Q ss_pred             HHHHHHHHHHHHHHHHHHH--hhccchHHHHHHHhhHHHHHHHHHHHhcCCCCCccchhhHH----HHHHHHHHhhe
Q psy16816        186 AKVAFVFSFLRFGAEYTFT--LLGAEAGTVALIYSSSSVLTLLICAFFPSSSSDKFSLSKCV----TVCISVCGLIL  256 (470)
Q Consensus       186 ~~l~~~~~~l~~~~n~~~~--L~~tsvs~atiL~stsPvft~lla~lf~~~~~ek~s~~k~i----gvll~~~GVvl  256 (470)
                      ....+..+++|.++|.+|.  .+..-++.+-.++.++.+...+-+.+++   ||+=+++++.    |+++.++|.++
T Consensus       195 ~~~nil~G~~w~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il---~E~Kt~ke~~~~~~G~~Liv~G~il  268 (269)
T PF06800_consen  195 SWKNILTGLIWGIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFIL---KEKKTKKEMIYTLIGLILIVIGAIL  268 (269)
T ss_pred             hHHhhHHHHHHHHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEE---EecCchhhHHHHHHHHHHHHHhhhc
Confidence            3445678899999999999  8888999999999999999999999999   9998887654    44445555543

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>KOG1444|consensus

Probab=84.00  E-value=16  Score=37.07  Aligned_cols=134  Identities=16%  Similarity=0.220  Sum_probs=78.2

Q ss_pred             HHHHHHHHHHHHHHH----HHhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhcccccccCCCHHHHHH--HHHHHHHH
Q psy16816        276 SLVSALFYSLYIVFL----RRLEHEEKLDIVLFYGFVGLYNCLLLWPLFFLLHYNSWEVFSLPDRDQWVI--LLIEGLIG  349 (470)
Q Consensus       276 aL~sAl~~Al~~vl~----r~l~~~~~~~~~~~~g~vglf~l~~l~p~~~~l~~~~~e~~~~p~~~~~~~--ll~~gil~  349 (470)
                      .+.++++|++-..++    |.+-...+.++.++.++.--++.++.....-.+....++++++...+.|..  +++.+-+-
T Consensus        13 ~l~sa~~Y~~sS~lm~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~lk~~~lv~~~~l~~~~~kk~~P~~~lf~~~i~   92 (314)
T KOG1444|consen   13 PLLSALFYCLSSILMTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLVLKRLGLVNFRPLDLRTAKKWFPVSLLFVGMLF   92 (314)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHhceeecCCcChHHHHHHccHHHHHHHHHH
Confidence            467788888776665    333333455555554433333332222222223334455555444444432  22222221


Q ss_pred             HHHHHHHHHHHHHhhchhHHHHHHHhHHHHHHHHHHHHhCCCCCHHHHhHHHHHHHHHHHHHhhhc
Q psy16816        350 SVLTETLWLWGMLLTSPLIATLGLGLIVPLSMIANTSLYHVTYPRLFYVGAVPVVFAFVASILLAQ  415 (470)
Q Consensus       350 s~ls~~l~~~ai~~tspl~~tv~~~l~iPla~i~~~l~~ge~~s~~~iiG~~lIl~g~~l~~~~~~  415 (470)
                      +.      ..+.++.+--.-++.-.+++.+.++.+.+++|.+++...+.....+++|-.+....+.
T Consensus        93 t~------~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~~~d~  152 (314)
T KOG1444|consen   93 TG------SKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAAAFTDL  152 (314)
T ss_pred             Hc------cccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhhccccc
Confidence            11      2344444433555566678888999999999999999999999999999888876643

>TIGR00803 nst UDP-galactose transporter

Probab=82.61  E-value=2.1  Score=40.88  Aligned_cols=49  Identities=16%  Similarity=0.111  Sum_probs=46.4

Q ss_pred             hhccchHHHHHHHhhHHHHHHHHHHHhcCCCCCccchhhHHHHHHHHHHhhe
Q psy16816        205 LLGAEAGTVALIYSSSSVLTLLICAFFPSSSSDKFSLSKCVTVCISVCGLIL  256 (470)
Q Consensus       205 L~~tsvs~atiL~stsPvft~lla~lf~~~~~ek~s~~k~igvll~~~GVvl  256 (470)
                      ++|.+....++...+.++++.+++++++   +++++..+++|+.+.+.|+.+
T Consensus       173 lk~~~~~~~~~~~~~~~~~s~lls~~~f---~~~ls~~~~~g~~lV~~~~~l  221 (222)
T TIGR00803       173 VRYADNTTKSFVTALSIILSTLASVRLF---DAKISSTFYLGAILVFLATFL  221 (222)
T ss_pred             hHHhHHHHHHHHHHHHHHHHHHHHHHHh---cCCccHHHHHHHHHHHeeeEe
Confidence            9999999999999999999999999999   999999999999999998754

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>KOG4314|consensus

Probab=81.33  E-value=0.78  Score=43.35  Aligned_cols=65  Identities=11%  Similarity=0.015  Sum_probs=56.0

Q ss_pred             HHHHHHHHHHHHhhchhHHHHHHHhHHHHHHHHHHHHhCCCCCHHHHhHHHHHHHHHHHHHhhhc
Q psy16816        351 VLTETLWLWGMLLTSPLIATLGLGLIVPLSMIANTSLYHVTYPRLFYVGAVPVVFAFVASILLAQ  415 (470)
Q Consensus       351 ~ls~~l~~~ai~~tspl~~tv~~~l~iPla~i~~~l~~ge~~s~~~iiG~~lIl~g~~l~~~~~~  415 (470)
                      +.++|.|..++++.+|..++......-.+..+++++.+|+++....++.+++.+.|++++.+.+.
T Consensus        64 t~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~DN  128 (290)
T KOG4314|consen   64 TGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYADN  128 (290)
T ss_pred             ecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEeccc
Confidence            35689999999999999888665566667889999999999999999999999999999887643

>KOG3912|consensus

Probab=80.28  E-value=3.8  Score=40.94  Aligned_cols=73  Identities=19%  Similarity=0.168  Sum_probs=55.0

Q ss_pred             HHHHHHHHHHHHHhhchhHHHHHHHhHHHHHHHHHHHHhCCCCCHHHHhHHHHHHHHHHHHHhhhccccCChh
Q psy16816        350 SVLTETLWLWGMLLTSPLIATLGLGLIVPLSMIANTSLYHVTYPRLFYVGAVPVVFAFVASILLAQMASRDPV  422 (470)
Q Consensus       350 s~ls~~l~~~ai~~tspl~~tv~~~l~iPla~i~~~l~~ge~~s~~~iiG~~lIl~g~~l~~~~~~~~~~d~~  422 (470)
                      -..+..+++.++.+|++..--+.-...+.+..+++.-+++.+++..+|+|...+.+|++++-..+-.-+.||.
T Consensus        96 Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~d~~~~~~p~  168 (372)
T KOG3912|consen   96 DIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSLDVHLVTDPY  168 (372)
T ss_pred             HHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeeeeecccccCCc
Confidence            4455566677777777665444444567778889999999999999999999999999999877444344444

>PF11742 DUF3302: Protein of unknown function (DUF3302); InterPro: IPR011223 This is a family of uncharacterised bacterial proteins, restricted to the Gammaproteobacteria

Probab=80.14  E-value=16  Score=29.43  Aligned_cols=62  Identities=15%  Similarity=0.361  Sum_probs=45.2

Q ss_pred             hHHHHHHHHHHHHHHHHHHHH---HHhcc--CCchhHHHHHHHHHHHHHHHHHHHHHHHhhcccccc
Q psy16816        270 PSGSFLSLVSALFYSLYIVFL---RRLEH--EEKLDIVLFYGFVGLYNCLLLWPLFFLLHYNSWEVF  331 (470)
Q Consensus       270 ~~G~llaL~sAl~~Al~~vl~---r~l~~--~~~~~~~~~~g~vglf~l~~l~p~~~~l~~~~~e~~  331 (470)
                      .++.++.+..++.|++..+-.   |.-++  .+..+..-..|++|+|..-.+||...+..+...+..
T Consensus         5 a~~vli~~~~~~~~~~~~lh~lP~~iA~kr~Hpq~eaI~v~gwisLft~~~lWp~a~IwA~~d~~~~   71 (78)
T PF11742_consen    5 ALVVLIFVVIVLIYGFWKLHDLPGKIAHKRNHPQAEAIHVLGWISLFTLHVLWPFAWIWAYLDRPDR   71 (78)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccc
Confidence            457777888888888766554   22222  356788888999999988888999988777665544

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	470
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-06
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-04
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	8e-04

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 49.5 bits (117), Expect = 2e-06
 Identities = 37/217 (17%), Positives = 61/217 (28%), Gaps = 50/217 (23%)

Query: 3   KSECNTVN--ICSFLNVLLSRFQRH---ALGCF---VLI---LVDILWA-LSSEIVKKVD 50
              C+ +   I S LNVL     R     L  F     I   L+ ++W  +    V  V 
Sbjct: 349 HVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVV 408

Query: 51  QHVEDESYFTDQTEPPGELKFPLHNLFIQVFLLVSIKKLQSASRGLHGKVLFSGRSSGTE 110
             +   S    Q   P E    + ++++       +K        LH  ++         
Sbjct: 409 NKLHKYSLVEKQ---PKESTISIPSIYL------ELKVKLENEYALHRSIV--------- 450

Query: 111 SETENSMRKHVRFSKLTERPQVL-GVPASFLMEAPVRHLSDKE-ANEALLARLSYQATLR 168
               +       F      P  L     S +      HL + E      L R+ +     
Sbjct: 451 ----DHYNIPKTFDSDDLIPPYLDQYFYSHIG----HHLKNIEHPERMTLFRMVFL---- 498

Query: 169 TADFTFIQS----TKYNIPQVAKVAFVFSFLRFGAEY 201
             DF F++               +      L+F   Y
Sbjct: 499 --DFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPY 533

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 42.5 bits (99), Expect = 3e-04
 Identities = 59/418 (14%), Positives = 126/418 (30%), Gaps = 118/418 (28%)

Query: 19  LSRFQRHALGCFVLILVDILWALSSEIVKKVDQHVEDESYFTDQTEPPGELKFPLHNLFI 78
           L R  +       L+++  +   +++     +         + +             L  
Sbjct: 234 LRRLLKSKPYENCLLVLLNVQ--NAKAWNAFN--------LSCKI------------LLT 271

Query: 79  ----QVFLLVSIKKLQSASRGLHGKVLFSGRSSGTESETENSMRK--HVRFSKLTER--- 129
               QV   +S       S   H   L       T  E ++ + K    R   L      
Sbjct: 272 TRFKQVTDFLSAATTTHISLDHHSMTL-------TPDEVKSLLLKYLDCRPQDLPREVLT 324

Query: 130 --PQVLGVPASFLMEAPVR-----HLSDKEANEALLARLSYQ--ATLRTA--DFT-FIQS 177
             P+ L + A  + +         H++  +    + + L+    A  R      + F  S
Sbjct: 325 TNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPS 384

Query: 178 TKYNIPQVAKVAFVFSFLRFGAEYTFTLLGAEAGTVALIYSSSSVLTLLICAFFPSSSS- 236
              +IP +     + S + F    +          V ++ +     +L+      S+ S 
Sbjct: 385 A--HIPTI-----LLSLIWFDVIKS---------DVMVVVNKLHKYSLVEKQPKESTISI 428

Query: 237 ------------DKFSLSKCVTVCISVCGLILVTISDVYMEHLHIPSGSFLSL-VSALFY 283
                       ++++L +              +I D Y       S   +   +   FY
Sbjct: 429 PSIYLELKVKLENEYALHR--------------SIVDHYNIPKTFDSDDLIPPYLDQYFY 474

Query: 284 SLYIVF-LRRLEHEEKLD----IVLFYGFVG--LYNCLLLW----PLFFLLH----YNSW 328
           S +I   L+ +EH E++     + L + F+   + +    W     +   L     Y  +
Sbjct: 475 S-HIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPY 533

Query: 329 EVFSLPDRDQWVILLIEGLIGSVLTETLWLWGMLLTSPLIATLGLGLIVPLSMIANTS 386
              + P  ++ V  +++ L      E       L+ S     L + L+     I   +
Sbjct: 534 ICDNDPKYERLVNAILDFLPKI---EE-----NLICSKYTDLLRIALMAEDEAIFEEA 583

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 41.0 bits (95), Expect = 8e-04
 Identities = 74/477 (15%), Positives = 138/477 (28%), Gaps = 146/477 (30%)

Query: 31  VLILVDILWALSSEIVKKVDQHVEDESY-F------TDQTEPPGELKF------PLHNLF 77
            L L   L +   E+V+K  + V   +Y F      T+Q +P    +        L+N  
Sbjct: 64  TLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYND- 122

Query: 78  IQVF-------------LLVSIKKLQSASR-GLHGKVLFSGRSSGTESETENSMRKHVRF 123
            QVF             L  ++ +L+ A    + G VL SG++     +   S +   + 
Sbjct: 123 NQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDG-VLGSGKTWVA-LDVCLSYKVQCKM 180

Query: 124 SKLTERPQVLGVPASFLMEAPVRHLSDKEANEALLARLSYQATLRTADFTFIQSTKYNIP 183
                      +   F +   +++ +  E    +L +L YQ      ++T       NI 
Sbjct: 181 D--------FKI---FWLN--LKNCNSPETVLEMLQKLLYQID---PNWTSRSDHSSNIK 224

Query: 184 Q-VAKVAFVFSFLRFGAEYTFTLLGAEAGTVAL--IYSSSSVLTLLICAFFPSSSSDKFS 240
             +  +      L     Y   LL      V L  + ++ +               + F+
Sbjct: 225 LRIHSIQAELRRLLKSKPYENCLL------V-LLNVQNAKAW--------------NAFN 263

Query: 241 LSKCVTVCISVCGLILVTISDVYMEHLHIPSGSFLSLVSALFYSLYIVFLRR-LEHEEKL 299
           L  C          IL+T                  L +A    + +      L  +E  
Sbjct: 264 L-SCK---------ILLTTRF---------KQVTDFLSAATTTHISLDHHSMTLTPDEVK 304

Query: 300 DIVLFYGFVGLYNCLLLWPLFFLLHYNSWEVFSLPDRDQWVILLIEGLIGSVLTETL--W 357
              L   ++                        LP            +I   + + L  W
Sbjct: 305 S--LLLKYLDC------------------RPQDLPREVLTTNPRRLSIIAESIRDGLATW 344

Query: 358 -LWGMLLTSPLIATLGLGLIVPLSMIANTSLYHVTYPRLFYVGAVPVVF-------AFVA 409
             W  +    L   +   L           L    Y ++F   +   VF         + 
Sbjct: 345 DNWKHVNCDKLTTIIESSL---------NVLEPAEYRKMFDRLS---VFPPSAHIPTILL 392

Query: 410 SILLAQMASRDPVLEILLSCVTSLSGPSLGRTSKKISDADSEQRESLININMCDQEV 466
           S++   +   D  + ++                 K S  + + +ES I+I     E+
Sbjct: 393 SLIWFDVIKSDV-MVVVNKLH-------------KYSLVEKQPKESTISIPSIYLEL 435

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	470
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	98.37
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	97.81
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	97.76
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	97.63

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=98.37  E-value=6.6e-07  Score=78.70  Aligned_cols=71  Identities=13%  Similarity=0.028  Sum_probs=49.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhchhHHHHH-HHhHHHHHHHHHHHHhCCCCCHHHHhHHHHHHHHHHHHHhhh
Q psy16816        344 IEGLIGSVLTETLWLWGMLLTSPLIATLG-LGLIVPLSMIANTSLYHVTYPRLFYVGAVPVVFAFVASILLA  414 (470)
Q Consensus       344 ~~gil~s~ls~~l~~~ai~~tspl~~tv~-~~l~iPla~i~~~l~~ge~~s~~~iiG~~lIl~g~~l~~~~~  414 (470)
                      +.+++++++++++|.+++++.++..+... ..+...++++++++++||++++.+++|.++|++|+++++..+
T Consensus        34 ~l~i~~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls~~~~~Gi~LIi~GV~ll~~~~  105 (137)
T 2i68_A           34 VGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS  105 (137)
T ss_dssp             CHHHHHHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHHC-
T ss_pred             HHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            35566788999999999999888777655 344444499999999999999999999999999999998653

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=97.81  E-value=0.00011  Score=62.01  Aligned_cols=70  Identities=13%  Similarity=0.014  Sum_probs=57.2

Q ss_pred             HHHHHHHHHHHHHHHHHHhhchhHHHHH-HHhHHHHHHHHHHHHhCCCCCHHHHhHHHHHHHHHHHHHhhh
Q psy16816        345 EGLIGSVLTETLWLWGMLLTSPLIATLG-LGLIVPLSMIANTSLYHVTYPRLFYVGAVPVVFAFVASILLA  414 (470)
Q Consensus       345 ~gil~s~ls~~l~~~ai~~tspl~~tv~-~~l~iPla~i~~~l~~ge~~s~~~iiG~~lIl~g~~l~~~~~  414 (470)
                      .++++..+++++|.+++++.+...+... ..+...++++++++++||++++.+++|.++|++|+++.+..+
T Consensus        35 ~~~~~~~~~~~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~s~~~~~Gi~lIi~Gv~~l~~~~  105 (110)
T 3b5d_A           35 GTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS  105 (110)
T ss_pred             HHHHHHHHHHHHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            4555678899999999998777666544 334444499999999999999999999999999999998653

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=97.76  E-value=6.8e-05  Score=63.19  Aligned_cols=65  Identities=14%  Similarity=0.203  Sum_probs=57.0

Q ss_pred             HHHHHHHHHHH--hhccchHHHHHH-HhhHHHHHHHHHHHhcCCCCCccchhhHHHHHHHHHHhheeeecC
Q psy16816        194 FLRFGAEYTFT--LLGAEAGTVALI-YSSSSVLTLLICAFFPSSSSDKFSLSKCVTVCISVCGLILVTISD  261 (470)
Q Consensus       194 ~l~~~~n~~~~--L~~tsvs~atiL-~stsPvft~lla~lf~~~~~ek~s~~k~igvll~~~GVvli~~~~  261 (470)
                      ..+.++.+++.  +++.|++.+..+ ..+.|+++.+++++++   +|+++..|++|+++.++|++++...+
T Consensus        38 ~~~~~~~~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~---~E~~s~~~~~Gi~lIi~Gv~~l~~~~  105 (110)
T 3b5d_A           38 ICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFF---GQRLDLPAIIGMMLICAGVLIINLLS  105 (110)
T ss_pred             HHHHHHHHHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHh---CCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            34455555555  999999999888 8999999999999999   99999999999999999999987654

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=97.63  E-value=5e-05  Score=66.63  Aligned_cols=65  Identities=14%  Similarity=0.203  Sum_probs=45.7

Q ss_pred             HHHHHHHHHHH--hhccchHHHHHH-HhhHHHHHHHHHHHhcCCCCCccchhhHHHHHHHHHHhheeeecC
Q psy16816        194 FLRFGAEYTFT--LLGAEAGTVALI-YSSSSVLTLLICAFFPSSSSDKFSLSKCVTVCISVCGLILVTISD  261 (470)
Q Consensus       194 ~l~~~~n~~~~--L~~tsvs~atiL-~stsPvft~lla~lf~~~~~ek~s~~k~igvll~~~GVvli~~~~  261 (470)
                      +.+.++.++++  +++.+++.+..+ .+..|+++.+++++++   +|++++.+++|+++.++|++++...+
T Consensus        38 ~~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~l---gE~ls~~~~~Gi~LIi~GV~ll~~~~  105 (137)
T 2i68_A           38 ICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFF---GQRLDLPAIIGMMLICAGVLIINLLS  105 (137)
T ss_dssp             HHHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHH---C------CHHHHHHHHHHHHHHHHC-
T ss_pred             HHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHh---CCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            34455556666  999999999888 8999999999999999   99999999999999999999987654

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00