Psyllid ID: psy16922

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70-----
Protein Sequence
MFAQIEKNENLLTSKIVSLENNMKQPADYRKPCGVFNIGMVFITCLYGFTGLVGYMKYGAATQGSVTLNLPKTSM
Secondary Structure (PSIPRED)
cccccEEHHccccEEHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccEEEEccccccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHHHHHHHHHHHccccccHcccccHHHHHHHHHHHHHHHHHHHHHHEEcccccccEEEEccccccc
Coil and Loop (DISEMBL)
MFAQIEKNENLLTSKIVSLEnnmkqpadyrkpcgvfnIGMVFITCLYGFTGLVGYmkygaatqgsvtlnlpktsm
Flexible Loop (DISEMBL)
mfaqieknenlLTSKIVSLENNMKQPADYRKPCGVFNIGMVFITCLYGFTGLVGYMKYGAatqgsvtlnlpktsm
Low Complexity Region (SEG)
MFAQIEKNENLLTSKIVSLENNMKQPADYRKPCGVFNIGMVFITCLYGFTGLVGYMKYGAATQGSVTLNLPKTSM
Disordered region (IsUnstruct)
**************************ADYRKPCGVFNIGMVFITCLYGFTGLVGYMKYGAATQGSV*********
Disordered Region (DISOPRED)
MFAQIEKNENLLTSKIVSLENNMKQPADYRKPCGVFNIGMVFITCLYGFTGLVGYMKYGAATQGSVTLNLP****
Disordered Region (DISEMBL)
MFAQIEKNENLLTSKIVSLENNMKQPADYRKPCGVFNIGMVFITCLYGFTGLVGYMKYGAATQGSVTLNLPKTSM
Disordered Region (DISPRO)
MFAQIEKNENLLTSKIVSLENNMKQPADYRKPCGVFNIGMVFITCLYGFTGLVGYMKYGAATQGSVTLNLP****
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MFAQIEKNENLLTSKIVSLENNMKQPADYRKPCGVFNIGMVFITCLYGFTGLVGYMKYGAATQGSVTLNLPKTSM
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	75	2.2.26 [Sep-21-2011]
Q7Z2H8	476	Proton-coupled amino acid	yes	N/A	0.706	0.111	0.482	6e-07
Q4V8B1	477	Proton-coupled amino acid	yes	N/A	0.706	0.111	0.446	5e-06
Q495N2	470	Proton-coupled amino acid	no	N/A	0.706	0.112	0.428	5e-06
Q4KL91	522	Proton-coupled amino acid	N/A	N/A	0.746	0.107	0.406	1e-05
Q811P0	477	Proton-coupled amino acid	yes	N/A	0.706	0.111	0.428	1e-05
Q924A5	475	Proton-coupled amino acid	no	N/A	0.706	0.111	0.446	2e-05
Q8K4D3	475	Proton-coupled amino acid	no	N/A	0.706	0.111	0.446	3e-05
Q8K415	481	Proton-coupled amino acid	no	N/A	0.706	0.110	0.410	9e-05
Q8BHK3	478	Proton-coupled amino acid	no	N/A	0.706	0.110	0.410	0.0003
Q8CH36	500	Proton-coupled amino acid	no	N/A	0.72	0.108	0.368	0.0006

>sp|Q7Z2H8|S36A1_HUMAN Proton-coupled amino acid transporter 1 OS=Homo sapiens GN=SLC36A1 PE=1 SV=1

 Score = 52.8 bits (125), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 27/56 (48%), Positives = 37/56 (66%), Gaps = 3/56 (5%)

Query: 16  IVSLENNMKQPADYRKPCGVFNIGMVFITCLYGFTGLVGYMKYGAATQGSVTLNLP 71
           ++ LEN MK P   RK   +  +GMV +T LY   G +GY+++GA  QGS+TLNLP
Sbjct: 275 VLPLENKMKDP---RKFPLILYLGMVIVTILYISLGCLGYLQFGANIQGSITLNLP 327

Neutral amino acid/proton symporter. Has a pH-dependent electrogenic transport activity for small amino acids such as glycine, alanine and proline. Besides small apolar L-amino acids, it also recognize their D-enantiomers and selected amino acid derivatives such as gamma-aminobutyric acid.
Homo sapiens (taxid: 9606)

>sp|Q4V8B1|S36A3_RAT Proton-coupled amino acid transporter 3 OS=Rattus norvegicus GN=Slc36a3 PE=2 SV=1

 Score = 49.7 bits (117), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 25/56 (44%), Positives = 35/56 (62%), Gaps = 3/56 (5%)

Query: 16  IVSLENNMKQPADYRKPCGVFNIGMVFITCLYGFTGLVGYMKYGAATQGSVTLNLP 71
           ++ L++ MK P  +     V  +GM F+  LY   G +GYMK+GA TQ S+TLNLP
Sbjct: 277 VLPLKSQMKSPQQFP---AVLYLGMSFVIFLYICLGTLGYMKFGADTQASITLNLP 329

Rattus norvegicus (taxid: 10116)

>sp|Q495N2|S36A3_HUMAN Proton-coupled amino acid transporter 3 OS=Homo sapiens GN=SLC36A3 PE=2 SV=2

 Score = 49.7 bits (117), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 24/56 (42%), Positives = 34/56 (60%), Gaps = 3/56 (5%)

Query: 16  IVSLENNMKQPADYRKPCGVFNIGMVFITCLYGFTGLVGYMKYGAATQGSVTLNLP 71
           ++ L+N MK P  +     V  +GM  +  LY   G +GYMK+G+ TQ S+TLNLP
Sbjct: 270 VLPLKNQMKHPQQFSF---VLYLGMSIVIILYILLGTLGYMKFGSDTQASITLNLP 322

Homo sapiens (taxid: 9606)

>sp|Q4KL91|S36A4_XENLA Proton-coupled amino acid transporter 4 OS=Xenopus laevis GN=slc36a4 PE=2 SV=1

 Score = 48.9 bits (115), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 24/59 (40%), Positives = 34/59 (57%), Gaps = 3/59 (5%)

Query: 16  IVSLENNMKQPADYRKPCGVFNIGMVFITCLYGFTGLVGYMKYGAATQGSVTLNLPKTS 74
           ++ LEN M+   D+ K     NIGM  +T LY     +GY  +G   +GS+TLNLP+ S
Sbjct: 310 VLPLENRMRDKKDFSK---ALNIGMAIVTTLYISLATLGYFCFGDQIKGSITLNLPQDS 365

Xenopus laevis (taxid: 8355)

>sp|Q811P0|S36A3_MOUSE Proton-coupled amino acid transporter 3 OS=Mus musculus GN=Slc36a3 PE=2 SV=1

 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 24/56 (42%), Positives = 34/56 (60%), Gaps = 3/56 (5%)

Query: 16  IVSLENNMKQPADYRKPCGVFNIGMVFITCLYGFTGLVGYMKYGAATQGSVTLNLP 71
           ++ L++ MK P  +     V  +GM F+  LY   G +GYMK+G  TQ S+TLNLP
Sbjct: 277 VLPLKSQMKSPQQFP---AVLYLGMSFVIFLYICLGTLGYMKFGTDTQASITLNLP 329

Mus musculus (taxid: 10090)

>sp|Q924A5|S36A1_RAT Proton-coupled amino acid transporter 1 OS=Rattus norvegicus GN=Slc36a1 PE=2 SV=1

 Score = 47.4 bits (111), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/56 (44%), Positives = 36/56 (64%), Gaps = 3/56 (5%)

Query: 16  IVSLENNMKQPADYRKPCGVFNIGMVFITCLYGFTGLVGYMKYGAATQGSVTLNLP 71
           ++ LEN MK   D +K   +  +GM  IT LY   G +GY+++GA  +GS+TLNLP
Sbjct: 274 VLPLENKMK---DSQKFPLILYLGMAIITVLYISLGSLGYLQFGADIKGSITLNLP 326

Neutral amino acid/proton symporter. Probably involved in the efflux of lysosomal proteolysis products such as L-proline, L-alanine and glycine from the cell. May play a role in specifying sites for exocytosis in neurons.

Rattus norvegicus (taxid: 10116)

>sp|Q8K4D3|S36A1_MOUSE Proton-coupled amino acid transporter 1 OS=Mus musculus GN=Slc36a1 PE=2 SV=1

 Score = 47.4 bits (111), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 25/56 (44%), Positives = 36/56 (64%), Gaps = 3/56 (5%)

Query: 16  IVSLENNMKQPADYRKPCGVFNIGMVFITCLYGFTGLVGYMKYGAATQGSVTLNLP 71
           ++ LEN MK   D +K   +  +GM  IT LY   G +GY+++GA  +GS+TLNLP
Sbjct: 274 VLPLENKMK---DSQKFPLILYLGMAIITVLYISLGSLGYLQFGANIKGSITLNLP 326

Neutral amino acid/proton symporter. Has a pH-dependent electrogenic transport activity for small amino acids such as glycine, alanine and proline. Besides small apolar L-amino acids, it also recognize their D-enantiomers and selected amino acid derivatives such as gamma-aminobutyric acid.

Mus musculus (taxid: 10090)

>sp|Q8K415|S36A2_RAT Proton-coupled amino acid transporter 2 OS=Rattus norvegicus GN=Slc36a2 PE=1 SV=1

 Score = 45.8 bits (107), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 23/56 (41%), Positives = 35/56 (62%), Gaps = 3/56 (5%)

Query: 16  IVSLENNMKQPADYRKPCGVFNIGMVFITCLYGFTGLVGYMKYGAATQGSVTLNLP 71
           ++ LEN MK   D R+   + ++GM  IT LY   G +GY+++G   + S+TLNLP
Sbjct: 280 VLPLENKMK---DARRFPTILSLGMSIITTLYIAIGALGYLRFGDDIKASITLNLP 332

Involved in a pH-dependent electrogenic neuronal transport and sequestration of small amino acids amino acids such as glycine, alanine and proline. Inhibited by sarcosine. Inhibited by L-pipecolic acid, D-pipecolic acid and isonipecotic acid.

Rattus norvegicus (taxid: 10116)

>sp|Q8BHK3|S36A2_MOUSE Proton-coupled amino acid transporter 2 OS=Mus musculus GN=Slc36a2 PE=1 SV=1

 Score = 43.9 bits (102), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 23/56 (41%), Positives = 34/56 (60%), Gaps = 3/56 (5%)

Query: 16  IVSLENNMKQPADYRKPCGVFNIGMVFITCLYGFTGLVGYMKYGAATQGSVTLNLP 71
           ++ LEN MK   D R    + ++GM  IT LY   G +GY+++G   + S+TLNLP
Sbjct: 277 VLPLENKMK---DARGFPTILSLGMSIITTLYIAIGALGYLRFGDDIKASITLNLP 329

Involved in a pH-dependent electrogenic neuronal transport and sequestration of small amino acids amino acids such as glycine, alanine and proline. Inhibited by sarcosine.

Mus musculus (taxid: 10090)

>sp|Q8CH36|S36A4_MOUSE Proton-coupled amino acid transporter 4 OS=Mus musculus GN=Slc36a4 PE=2 SV=1

 Score = 42.7 bits (99), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 21/57 (36%), Positives = 33/57 (57%), Gaps = 3/57 (5%)

Query: 16  IVSLENNMKQPADYRKPCGVFNIGMVFITCLYGFTGLVGYMKYGAATQGSVTLNLPK 72
           ++ LEN M++   + +     NIGM  +T LY     +GYM +    +GS+TLNLP+
Sbjct: 287 VLPLENQMRESKRFPQ---ALNIGMAIVTVLYISLATLGYMCFRDEIKGSITLNLPQ 340

Functions as a sodium-independent electroneutral transporter for tryptophan, proline and alanine.

Mus musculus (taxid: 10090)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	75
194759424	452	GF15226 [Drosophila ananassae] gi|190615	0.76	0.126	0.543	6e-12
157123283	509	amino acid transporter [Aedes aegypti] g	0.76	0.111	0.543	1e-11
195397889	518	GJ18031 [Drosophila virilis] gi|19414121	0.76	0.110	0.526	4e-11
91094631	493	PREDICTED: similar to amino acid transpo	0.76	0.115	0.508	1e-10
195115691	519	GI17357 [Drosophila mojavensis] gi|19391	0.76	0.109	0.508	1e-10
270016446	1108	hypothetical protein TcasGA2_TC004406 [T	0.76	0.051	0.508	1e-10
157127446	506	amino acid transporter [Aedes aegypti] g	0.746	0.110	0.553	2e-10
157127444	489	amino acid transporter [Aedes aegypti] g	0.746	0.114	0.553	2e-10
317183301	528	SD03414p [Drosophila melanogaster]	0.76	0.107	0.508	2e-10
158296566	507	AGAP008490-PA [Anopheles gambiae str. PE	0.746	0.110	0.535	2e-10

>gi|194759424|ref|XP_001961949.1| GF15226 [Drosophila ananassae] gi|190615646|gb|EDV31170.1| GF15226 [Drosophila ananassae]

 Score = 74.7 bits (182), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 31/57 (54%), Positives = 40/57 (70%)

Query: 16  IVSLENNMKQPADYRKPCGVFNIGMVFITCLYGFTGLVGYMKYGAATQGSVTLNLPK 72
           ++ LENNM+ P D+  P GV N GMV + CLY   G  GY+KYG A +GS+TLNLP+
Sbjct: 312 VLPLENNMRTPEDFSGPTGVLNTGMVIVACLYTSVGFFGYLKYGDAVKGSITLNLPQ 368

Source: Drosophila ananassae

Species: Drosophila ananassae

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157123283|ref|XP_001660096.1| amino acid transporter [Aedes aegypti] gi|108874408|gb|EAT38633.1| AAEL009479-PA [Aedes aegypti]

 Score = 73.6 bits (179), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 31/57 (54%), Positives = 40/57 (70%)

Query: 16  IVSLENNMKQPADYRKPCGVFNIGMVFITCLYGFTGLVGYMKYGAATQGSVTLNLPK 72
           ++ L+N MK+P D+RK CGV N GMVFI  L+   G  GY+K+G   QGS+TLNLP 
Sbjct: 311 VLPLQNEMKKPHDFRKACGVLNTGMVFIVSLFTLFGFAGYLKWGEDVQGSLTLNLPD 367

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195397889|ref|XP_002057560.1| GJ18031 [Drosophila virilis] gi|194141214|gb|EDW57633.1| GJ18031 [Drosophila virilis]

 Score = 72.4 bits (176), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 30/57 (52%), Positives = 39/57 (68%)

Query: 16  IVSLENNMKQPADYRKPCGVFNIGMVFITCLYGFTGLVGYMKYGAATQGSVTLNLPK 72
           ++ LENNM+ P D+    GV N GMV + CLY   G  GY+KYG A +GS+TLNLP+
Sbjct: 321 VLPLENNMRTPEDFGGSTGVLNTGMVIVACLYTSVGFFGYLKYGEAVKGSITLNLPQ 377

Source: Drosophila virilis

Species: Drosophila virilis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|91094631|ref|XP_969879.1| PREDICTED: similar to amino acid transporter [Tribolium castaneum]

 Score = 70.9 bits (172), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 29/57 (50%), Positives = 42/57 (73%)

Query: 16  IVSLENNMKQPADYRKPCGVFNIGMVFITCLYGFTGLVGYMKYGAATQGSVTLNLPK 72
           ++ L+N M++P+D++KP GV N+GM  +T LY   G + Y+KYG   +GSVTLNLPK
Sbjct: 291 VLPLQNEMRKPSDFKKPFGVLNVGMCVVTVLYILIGTLSYLKYGEDIEGSVTLNLPK 347

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195115691|ref|XP_002002390.1| GI17357 [Drosophila mojavensis] gi|193912965|gb|EDW11832.1| GI17357 [Drosophila mojavensis]

 Score = 70.9 bits (172), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 29/57 (50%), Positives = 39/57 (68%)

Query: 16  IVSLENNMKQPADYRKPCGVFNIGMVFITCLYGFTGLVGYMKYGAATQGSVTLNLPK 72
           ++ LENNM+ P D+    GV N GMV + CLY   G  GY+KYG + +GS+TLNLP+
Sbjct: 322 VLPLENNMRTPEDFGGTTGVLNTGMVIVACLYTSVGFFGYLKYGESVKGSITLNLPQ 378

Source: Drosophila mojavensis

Species: Drosophila mojavensis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|270016446|gb|EFA12892.1| hypothetical protein TcasGA2_TC004406 [Tribolium castaneum]

 Score = 70.5 bits (171), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 29/57 (50%), Positives = 42/57 (73%)

Query: 16  IVSLENNMKQPADYRKPCGVFNIGMVFITCLYGFTGLVGYMKYGAATQGSVTLNLPK 72
           ++ L+N M++P+D++KP GV N+GM  +T LY   G + Y+KYG   +GSVTLNLPK
Sbjct: 906 VLPLQNEMRKPSDFKKPFGVLNVGMCVVTVLYILIGTLSYLKYGEDIEGSVTLNLPK 962

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157127446|ref|XP_001654984.1| amino acid transporter [Aedes aegypti] gi|108882419|gb|EAT46644.1| AAEL002214-PB [Aedes aegypti]

 Score = 70.1 bits (170), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 31/56 (55%), Positives = 37/56 (66%)

Query: 16  IVSLENNMKQPADYRKPCGVFNIGMVFITCLYGFTGLVGYMKYGAATQGSVTLNLP 71
           ++ LENNMK P D+    GV N GMV + CLY   G  GY+KYG   QGS+TLNLP
Sbjct: 309 VLPLENNMKTPEDFGGWTGVLNTGMVIVACLYTAVGFFGYLKYGEGVQGSITLNLP 364

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157127444|ref|XP_001654983.1| amino acid transporter [Aedes aegypti] gi|108882418|gb|EAT46643.1| AAEL002214-PA [Aedes aegypti]

 Score = 70.1 bits (170), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 31/56 (55%), Positives = 37/56 (66%)

Query: 16  IVSLENNMKQPADYRKPCGVFNIGMVFITCLYGFTGLVGYMKYGAATQGSVTLNLP 71
           ++ LENNMK P D+    GV N GMV + CLY   G  GY+KYG   QGS+TLNLP
Sbjct: 292 VLPLENNMKTPEDFGGWTGVLNTGMVIVACLYTAVGFFGYLKYGEGVQGSITLNLP 347

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|317183301|gb|ADV15454.1| SD03414p [Drosophila melanogaster]

 Score = 69.7 bits (169), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 29/57 (50%), Positives = 38/57 (66%)

Query: 16  IVSLENNMKQPADYRKPCGVFNIGMVFITCLYGFTGLVGYMKYGAATQGSVTLNLPK 72
           ++ LENNM+ P D+    GV N GMV + CLY   G  GY+KYG   +GS+TLNLP+
Sbjct: 331 VLPLENNMRTPEDFGGTTGVLNTGMVIVACLYTAVGFFGYLKYGEHVEGSITLNLPQ 387

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|158296566|ref|XP_316954.4| AGAP008490-PA [Anopheles gambiae str. PEST] gi|157014771|gb|EAA12852.4| AGAP008490-PA [Anopheles gambiae str. PEST]

 Score = 69.7 bits (169), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 30/56 (53%), Positives = 38/56 (67%)

Query: 16  IVSLENNMKQPADYRKPCGVFNIGMVFITCLYGFTGLVGYMKYGAATQGSVTLNLP 71
           ++ LENNMK P D+    GV N GMV + CLY   G  GY+KYG + +GS+TLNLP
Sbjct: 310 VLPLENNMKTPEDFGGWSGVLNTGMVIVACLYTAVGFFGYLKYGDSVKGSITLNLP 365

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	75
FB|FBgn0032036	504	CG13384 [Drosophila melanogast	0.76	0.113	0.508	2e-11
FB|FBgn0036116	465	CG7888 [Drosophila melanogaste	0.76	0.122	0.508	4.5e-10
FB|FBgn0036007	500	path "pathetic" [Drosophila me	0.746	0.112	0.482	2.3e-09
FB|FBgn0035300	451	CG1139 [Drosophila melanogaste	0.8	0.133	0.416	2.4e-09
FB|FBgn0030816	468	CG16700 [Drosophila melanogast	0.773	0.123	0.431	4.3e-09
WB|WBGene00016628	489	C44B7.6 [Caenorhabditis elegan	0.746	0.114	0.428	7.5e-09
WB|WBGene00010421	481	H32K16.1 [Caenorhabditis elega	0.773	0.120	0.431	2e-08
UNIPROTKB|H0YB60	145	SLC36A1 "Proton-coupled amino	0.706	0.365	0.464	2.6e-08
UNIPROTKB|H0YBS2	89	SLC36A1 "Proton-coupled amino	0.706	0.595	0.464	2.6e-08
FB|FBgn0033760	474	CG8785 [Drosophila melanogaste	0.76	0.120	0.403	1.4e-07

FB|FBgn0032036 CG13384 [Drosophila melanogaster (taxid:7227)]

 Score = 165 (63.1 bits), Expect = 2.0e-11, P = 2.0e-11
 Identities = 29/57 (50%), Positives = 38/57 (66%)

Query:    16 IVSLENNMKQPADYRKPCGVFNIGMVFITCLYGFTGLVGYMKYGAATQGSVTLNLPK 72
             ++ LENNM+ P D+    GV N GMV + CLY   G  GY+KYG   +GS+TLNLP+
Sbjct:   307 VLPLENNMRTPEDFGGTTGVLNTGMVIVACLYTAVGFFGYLKYGEHVEGSITLNLPQ 363

GO:0015171 "amino acid transmembrane transporter activity" evidence=ISS

GO:0003333 "amino acid transmembrane transport" evidence=ISS

FB|FBgn0036116 CG7888 [Drosophila melanogaster (taxid:7227)]

 Score = 152 (58.6 bits), Expect = 4.5e-10, P = 4.5e-10
 Identities = 29/57 (50%), Positives = 37/57 (64%)

Query:    16 IVSLENNMKQPADYRKPCGVFNIGMVFITCLYGFTGLVGYMKYGAATQGSVTLNLPK 72
             I+ LEN MK P  +   CGV N+ MV I  LY   GL GY+ YG+A  GS+TLN+P+
Sbjct:   266 ILPLENEMKTPQKFGGSCGVLNVSMVLIVFLYVGMGLFGYLNYGSAVLGSITLNMPE 322

GO:0015171 "amino acid transmembrane transporter activity" evidence=ISS

GO:0003333 "amino acid transmembrane transport" evidence=ISS

FB|FBgn0036007 path "pathetic" [Drosophila melanogaster (taxid:7227)]

 Score = 146 (56.5 bits), Expect = 2.3e-09, P = 2.3e-09
 Identities = 27/56 (48%), Positives = 38/56 (67%)

Query:    16 IVSLENNMKQPADYRKPCGVFNIGMVFITCLYGFTGLVGYMKYGAATQGSVTLNLP 71
             ++ LENNMK P  +   CGV + GM  +T +Y   G +GY++YG+AT  S+TLNLP
Sbjct:   299 VMPLENNMKTPQSFLGICGVLSQGMSGVTLIYMLLGFLGYLRYGSATGESITLNLP 354

GO:0015171 "amino acid transmembrane transporter activity" evidence=ISS;NAS

GO:0040008 "regulation of growth" evidence=NAS

GO:0040007 "growth" evidence=IMP

GO:0003333 "amino acid transmembrane transport" evidence=ISS

FB|FBgn0035300 CG1139 [Drosophila melanogaster (taxid:7227)]

 Score = 145 (56.1 bits), Expect = 2.4e-09, P = 2.4e-09
 Identities = 25/60 (41%), Positives = 38/60 (63%)

Query:    16 IVSLENNMKQPADYRKPCGVFNIGMVFITCLYGFTGLVGYMKYGAATQGSVTLNLPKTSM 75
             I+++E NM  P  +  PCG+ N GM  +  LY   G  GY KYG  ++GS+TLN+P++ +
Sbjct:   255 ILAIEENMATPKSFVGPCGILNSGMSIVLGLYVLLGFFGYWKYGNESEGSITLNIPQSEI 314

GO:0015171 "amino acid transmembrane transporter activity" evidence=ISS

GO:0040007 "growth" evidence=IMP

GO:0003333 "amino acid transmembrane transport" evidence=ISS

FB|FBgn0030816 CG16700 [Drosophila melanogaster (taxid:7227)]

 Score = 143 (55.4 bits), Expect = 4.3e-09, P = 4.3e-09
 Identities = 25/58 (43%), Positives = 39/58 (67%)

Query:    16 IVSLENNMKQPADYRKPCGVFNIGMVFITCLYGFTGLVGYMKYGAATQGSVTLNLPKT 73
             ++ L+N M++P  + +P GV N+GM  ++ ++ F G VGYMK+G    GS+TLNL  T
Sbjct:   268 VMPLKNAMRKPHQFERPLGVLNVGMFLVSVMFMFAGSVGYMKWGEQVGGSLTLNLGDT 325

GO:0015495 "gamma-aminobutyric acid:hydrogen symporter activity" evidence=ISS

GO:0008021 "synaptic vesicle" evidence=ISS

GO:0003333 "amino acid transmembrane transport" evidence=ISS

GO:0015171 "amino acid transmembrane transporter activity" evidence=ISS

GO:0022008 "neurogenesis" evidence=IMP

WB|WBGene00016628 C44B7.6 [Caenorhabditis elegans (taxid:6239)]

 Score = 141 (54.7 bits), Expect = 7.5e-09, P = 7.5e-09
 Identities = 24/56 (42%), Positives = 36/56 (64%)

Query:    16 IVSLENNMKQPADYRKPCGVFNIGMVFITCLYGFTGLVGYMKYGAATQGSVTLNLP 71
             ++ LEN MK+P D + P GV ++G+  +  +Y F G  G++ YG   Q S+TLNLP
Sbjct:   290 VLPLENRMKKPEDMKGPFGVLSVGVGMVVVIYSFAGFFGFLTYGNDVQDSITLNLP 345

GO:0016021 "integral to membrane" evidence=IEA

WB|WBGene00010421 H32K16.1 [Caenorhabditis elegans (taxid:6239)]

 Score = 137 (53.3 bits), Expect = 2.0e-08, P = 2.0e-08
 Identities = 25/58 (43%), Positives = 36/58 (62%)

Query:    16 IVSLENNMKQPADYRKPCGVFNIGMVFITCLYGFTGLVGYMKYGAATQGSVTLNLPKT 73
             ++ +EN++K P D     GV +  M  +T LY F G  GY+ +G A QGS+TLNLP +
Sbjct:   279 VLPMENSLKYPKDMTGATGVLSTAMNLVTVLYAFLGFFGYVTFGPAVQGSLTLNLPNS 336

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|H0YB60 SLC36A1 "Proton-coupled amino acid transporter 1" [Homo sapiens (taxid:9606)]

 Score = 127 (49.8 bits), Expect = 2.6e-08, P = 2.6e-08
 Identities = 26/56 (46%), Positives = 37/56 (66%)

Query:    16 IVSLENNMKQPADYRKPCGVFNIGMVFITCLYGFTGLVGYMKYGAATQGSVTLNLP 71
             ++ LEN MK P  +  P  +  +GMV +T LY   G +GY+++GA  QGS+TLNLP
Sbjct:    34 VLPLENKMKDPRKF--PL-ILYLGMVIVTILYISLGCLGYLQFGANIQGSITLNLP 86

GO:0016021 "integral to membrane" evidence=IEA

GO:0005764 "lysosome" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0015078 "hydrogen ion transmembrane transporter activity" evidence=IEA

GO:0015180 "L-alanine transmembrane transporter activity" evidence=IEA

GO:0015187 "glycine transmembrane transporter activity" evidence=IEA

GO:0015193 "L-proline transmembrane transporter activity" evidence=IEA

UNIPROTKB|H0YBS2 SLC36A1 "Proton-coupled amino acid transporter 1" [Homo sapiens (taxid:9606)]

 Score = 127 (49.8 bits), Expect = 2.6e-08, P = 2.6e-08
 Identities = 26/56 (46%), Positives = 37/56 (66%)

Query:    16 IVSLENNMKQPADYRKPCGVFNIGMVFITCLYGFTGLVGYMKYGAATQGSVTLNLP 71
             ++ LEN MK P  +  P  +  +GMV +T LY   G +GY+++GA  QGS+TLNLP
Sbjct:     2 VLPLENKMKDPRKF--PL-ILYLGMVIVTILYISLGCLGYLQFGANIQGSITLNLP 54

GO:0016021 "integral to membrane" evidence=IEA

FB|FBgn0033760 CG8785 [Drosophila melanogaster (taxid:7227)]

 Score = 129 (50.5 bits), Expect = 1.4e-07, P = 1.4e-07
 Identities = 23/57 (40%), Positives = 37/57 (64%)

Query:    16 IVSLENNMKQPADYRKPCGVFNIGMVFITCLYGFTGLVGYMKYGAATQGSVTLNLPK 72
             ++ +EN+M++P  +    GV NI MV +  LY   G  GY+++G   +GS+TLNLP+
Sbjct:   276 VMPVENSMRKPQHFLGCPGVLNIAMVTVVSLYAIIGFFGYVRFGDQVRGSITLNLPE 332

GO:0003333 "amino acid transmembrane transport" evidence=ISS

GO:0015171 "amino acid transmembrane transporter activity" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	75
pfam01490	406	pfam01490, Aa_trans, Transmembrane amino acid tran	2e-10

>gnl|CDD|216528 pfam01490, Aa_trans, Transmembrane amino acid transporter protein

 Score = 54.2 bits (131), Expect = 2e-10
 Identities = 20/59 (33%), Positives = 36/59 (61%)

Query: 16  IVSLENNMKQPADYRKPCGVFNIGMVFITCLYGFTGLVGYMKYGAATQGSVTLNLPKTS 74
           ++ ++N MK P+ ++    V    ++ +T LY   GLVGY+ +G   +G++ LNLPK+ 
Sbjct: 212 LLPIQNTMKSPSKFKAMTKVLLTAIIIVTVLYILVGLVGYLAFGNNVKGNILLNLPKSD 270

This transmembrane region is found in many amino acid transporters including UNC-47 and MTR. UNC-47 encodes a vesicular amino butyric acid (GABA) transporter, (VGAT). UNC-47 is predicted to have 10 transmembrane domains. MTR is a N system amino acid transporter system protein involved in methyltryptophan resistance. Other members of this family include proline transporters and amino acid permeases. Length = 406

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	75
KOG1304|consensus	449		99.89
PF01490	409	Aa_trans: Transmembrane amino acid transporter pro	99.5
PLN03074	473	auxin influx permease; Provisional	99.49
KOG1303|consensus	437		99.49
PTZ00206	467	amino acid transporter; Provisional	99.48
KOG1305|consensus	411		99.05
KOG4303|consensus	524		98.92
COG0814	415	SdaC Amino acid permeases [Amino acid transport an	98.49
TIGR00837	381	araaP aromatic amino acid transport protein. aroma	90.05
PRK11021	410	putative transporter; Provisional	88.1
TIGR00912	359	2A0309 spore germination protein (amino acid perme	86.71
TIGR00906	557	2A0303 cationic amino acid transport permease.	86.18
PRK10655	438	potE putrescine transporter; Provisional	84.72
PRK10435	435	cadB lysine/cadaverine antiporter; Provisional	83.87
KOG1287|consensus	479		83.71
TIGR00909	429	2A0306 amino acid transporter.	81.69
COG0531	466	PotE Amino acid transporters [Amino acid transport	81.5
PRK11357	445	frlA putative fructoselysine transporter; Provisio	81.46
TIGR00911	501	2A0308 L-type amino acid transporter.	80.63

>KOG1304|consensus

Probab=99.89  E-value=5.6e-24  Score=155.65  Aligned_cols=72  Identities=39%  Similarity=0.685  Sum_probs=69.0

Q ss_pred             hhhhhcccccceeeehhhHHhCCCCCCCCCccchhhhHHHHHHHHHHHHHhhhHhhccccccchhhhcCCCC
Q psy16922          2 FAQIEKNENLLTSKIVSLENNMKQPADYRKPCGVFNIGMVFITCLYGFTGLVGYMKYGAATQGSVTLNLPKT   73 (75)
Q Consensus         2 ~~~~~~~~~~g~~vv~~i~~~Mk~p~~f~~~~~vl~~s~~i~~~ly~~~G~~GYl~fG~~v~~~I~lnlp~~   73 (75)
                      |.-.++|++||+|+++|+||+||+|++|+.++++++.+|.+++++|..+|++||++|||+++++||+|+|++
T Consensus       246 f~GtaifafEGig~VLPlEn~Mk~P~~F~g~~gVLn~~M~~V~~ly~~~Gf~GYl~fG~~v~~sITLNLP~~  317 (449)
T KOG1304|consen  246 FFGTAIFAFEGIGMVLPLENSMKKPQKFPGPFGVLNLGMGIVTLLYIFLGFFGYLAFGDDVKGSITLNLPQE  317 (449)
T ss_pred             HHHHHHHHhccceEEEehhhcccChhhcCCccchHHHHHHHHHHHHHHHHHHHHhhccccccceEEecCCcc
Confidence            455789999999999999999999999999999999999999999999999999999999999999999993

>PF01490 Aa_trans: Transmembrane amino acid transporter protein; InterPro: IPR013057 This transmembrane region is found in many amino acid transporters including P34579 from SWISSPROT (UNC-47) and P40501 from SWISSPROT (MTR)

Probab=99.50  E-value=4.5e-15  Score=104.55  Aligned_cols=70  Identities=27%  Similarity=0.536  Sum_probs=66.2

Q ss_pred             hhcccccceeeehhhHHhCCCCCCCCCccchhhhHHHHHHHHHHHHHhhhHhhccccccchhhhcCCCCC
Q psy16922          5 IEKNENLLTSKIVSLENNMKQPADYRKPCGVFNIGMVFITCLYGFTGLVGYMKYGAATQGSVTLNLPKTS   74 (75)
Q Consensus         5 ~~~~~~~g~~vv~~i~~~Mk~p~~f~~~~~vl~~s~~i~~~ly~~~G~~GYl~fG~~v~~~I~lnlp~~~   74 (75)
                      +..++|++|..+++++++||+|++|+|..+++.+++.+++++|..+|++||++||++++++++.|+|+++
T Consensus       200 i~~faf~~~~~~~~i~~~m~~~~~~~~~~~~~~~s~~~~~~~y~~~g~~gy~~fg~~~~~~il~n~~~~~  269 (409)
T PF01490_consen  200 IIIFAFSCHPNLPPIQSEMKDPSKFKKMKKVLSISMIICFIIYLLFGIFGYLAFGDSVQGNILLNLPNDD  269 (409)
T ss_pred             hhhhhhhcccccceeeeeccCCccccccceeeeehhhhhhHHhhhhhhcccceeeeeecchhhhcCCCcc
Confidence            5578999999999999999999999877779999999999999999999999999999999999999875

UNC-47 encodes a vesicular amino butyric acid (GABA) transporter, (VGAT) and is is predicted to have 10 transmembrane domains UNC47_CAEEL []. MTR is an N system amino acid transporter system protein involved in methyltryptophan resistance MTR_NEUCR. Other members of this family include proline transporters and amino acid transporters whose specificity has not yet been identified.

>PLN03074 auxin influx permease; Provisional

Probab=99.49  E-value=9.5e-15  Score=107.58  Aligned_cols=66  Identities=14%  Similarity=0.156  Sum_probs=58.3

Q ss_pred             hcccccceeeehhhHHhCCCCCCCCCccchhhhHHHHHHHHHHHHHhhhHhhccccccc-h-hhhcCCCCC
Q psy16922          6 EKNENLLTSKIVSLENNMKQPADYRKPCGVFNIGMVFITCLYGFTGLVGYMKYGAATQG-S-VTLNLPKTS   74 (75)
Q Consensus         6 ~~~~~~g~~vv~~i~~~Mk~p~~f~~~~~vl~~s~~i~~~ly~~~G~~GYl~fG~~v~~-~-I~lnlp~~~   74 (75)
                      ..|+||||++++|++++||||++|++   ++.++...++.+|+.+|+.||+.|||++++ + ++.|+|++.
T Consensus       242 i~faf~g~~v~~~I~~~M~~P~~F~~---~~~l~~~~v~~~y~~~~~~gY~~fG~~~~~~s~~l~~lp~~~  309 (473)
T PLN03074        242 ILYTFGGHAVTVEIMHAMWKPQKFKY---IYLAATLYVLTLTLPSAAAVYWAFGDELLTHSNAFSLLPRSG  309 (473)
T ss_pred             HHHHhcccccHHHHHHhccChhcccc---hHHHHHHHHHHHHHHHHHeeeeeechhhhhchhHHhcCCCch
Confidence            57999999999999999999999986   888999999999999999999999999864 4 455688653

>KOG1303|consensus

Probab=99.49  E-value=1.8e-14  Score=105.65  Aligned_cols=62  Identities=21%  Similarity=0.421  Sum_probs=59.8

Q ss_pred             cccccceeeehhhHHhCCCCCCCCCccchhhhHHHHHHHHHHHHHhhhHhhccccccchhhhcCC
Q psy16922          7 KNENLLTSKIVSLENNMKQPADYRKPCGVFNIGMVFITCLYGFTGLVGYMKYGAATQGSVTLNLP   71 (75)
Q Consensus         7 ~~~~~g~~vv~~i~~~Mk~p~~f~~~~~vl~~s~~i~~~ly~~~G~~GYl~fG~~v~~~I~lnlp   71 (75)
                      .|+|.||+++|+|+++||+|++|.|   ++..+..+++.+|+.+++.||++|||+++++++.|++
T Consensus       238 aFaf~gH~v~peIq~tMk~p~~f~~---~~lis~~~~~~~y~~vai~GY~aFG~~~~~~il~s~~  299 (437)
T KOG1303|consen  238 AFAYGGHAVLPEIQHTMKSPPKFKK---ALLISYIIVTFLYFPVAIIGYWAFGDSVPDNILLSLQ  299 (437)
T ss_pred             eeeecCCeeeeehHhhcCCchhhhh---HHHHHHHHHHHHHHHHHHhhhhhhccccchhhhhccc
Confidence            5899999999999999999999986   9999999999999999999999999999999999995

>PTZ00206 amino acid transporter; Provisional

Probab=99.48  E-value=1.3e-14  Score=106.27  Aligned_cols=67  Identities=21%  Similarity=0.307  Sum_probs=59.8

Q ss_pred             hhcccccceeeehhhHHhCCCCC--CCCCccchhhhHHHHHHHHHHHHHhhhHhhccccccchhhhcC-CCCC
Q psy16922          5 IEKNENLLTSKIVSLENNMKQPA--DYRKPCGVFNIGMVFITCLYGFTGLVGYMKYGAATQGSVTLNL-PKTS   74 (75)
Q Consensus         5 ~~~~~~~g~~vv~~i~~~Mk~p~--~f~~~~~vl~~s~~i~~~ly~~~G~~GYl~fG~~v~~~I~lnl-p~~~   74 (75)
                      +-.++|++|..+++++++||+|+  ++.   +++.+++.+|+++|..+|++||++||++++++|++|+ |.++
T Consensus       264 i~~faF~~h~~~~~i~~~M~~~t~~~~~---~v~~~s~~i~~~lY~~~G~~GYl~fG~~v~~~Illn~~p~~~  333 (467)
T PTZ00206        264 VFIFAYVFQITAYEVYMDMTNRSVGKFV---LASTIAMGMCFTMYVLTAFFGYMDFGRNVTGSVLLMYDPVNE  333 (467)
T ss_pred             HHHhhhhhhhhhHHHHHhhcccchhHHH---HHHHHHHHHHHHHHHHHHHhhhhccccccchHHHHhCCCCCC
Confidence            45789999999999999999965  444   4899999999999999999999999999999999999 5554

>KOG1305|consensus

Probab=99.05  E-value=5.6e-11  Score=86.78  Aligned_cols=69  Identities=26%  Similarity=0.379  Sum_probs=62.4

Q ss_pred             hhcccccceeeehhhHHhCCCCCCCCCccchhhhHHHHHHHHHHHHHhhhHhhccccccchhhhcCCCCC
Q psy16922          5 IEKNENLLTSKIVSLENNMKQPADYRKPCGVFNIGMVFITCLYGFTGLVGYMKYGAATQGSVTLNLPKTS   74 (75)
Q Consensus         5 ~~~~~~~g~~vv~~i~~~Mk~p~~f~~~~~vl~~s~~i~~~ly~~~G~~GYl~fG~~v~~~I~lnlp~~~   74 (75)
                      +..+++.+|.=+.++++|||||++ .|+.++.+.+...++.+|..+|.+||++|||++.++++.++|++.
T Consensus       202 i~~faf~Ch~n~~~i~~El~~~s~-~~i~~v~~~~~~~~~~iy~~~g~~GYL~Fg~~v~~n~l~~~~~~~  270 (411)
T KOG1305|consen  202 IFVFAFTCHSNVFPIYNELKDRSV-KKIQRVSNIAIILATLIYLLTGLFGYLTFGDLVKGNLLHNYDSIL  270 (411)
T ss_pred             hhheeeeccccceeeeeeeeCchH-HHHHHHHHHHHHHHHHHHHHHHHhhhheecccchHHHHhcCCccc
Confidence            567899999999999999999985 345568999999999999999999999999999999999998764

>KOG4303|consensus

Probab=98.92  E-value=3.9e-10  Score=82.14  Aligned_cols=67  Identities=24%  Similarity=0.381  Sum_probs=62.6

Q ss_pred             hhcccccceeeehhhHHhCCCCCCCCCccchhhhHHHHHHHHHHHHHhhhHhhccccccchhhhcCCCCC
Q psy16922          5 IEKNENLLTSKIVSLENNMKQPADYRKPCGVFNIGMVFITCLYGFTGLVGYMKYGAATQGSVTLNLPKTS   74 (75)
Q Consensus         5 ~~~~~~~g~~vv~~i~~~Mk~p~~f~~~~~vl~~s~~i~~~ly~~~G~~GYl~fG~~v~~~I~lnlp~~~   74 (75)
                      |-+|+|..+-.+|+++.+|++|++|.   .++.|+-+...++...+|.+|||+||++++..||.|||+..
T Consensus       310 ~iVFsYTSqIFLP~LEGNM~~ps~Fn---~Ml~WsHIAAaVfK~~Fg~~~fLTf~~~TqevItnnLp~qs  376 (524)
T KOG4303|consen  310 MIVFSYTSQIFLPNLEGNMKNPSQFN---VMLKWSHIAAAVFKVVFGMLGFLTFGELTQEVITNNLPNQS  376 (524)
T ss_pred             EEEEeeeceeeccccccccCChhHhe---eeeehHHHHHHHHHHHHHHheeeeechhhHHHHhcCCCccc
Confidence            45789999999999999999999998   48999999999999999999999999999999999999853

>COG0814 SdaC Amino acid permeases [Amino acid transport and metabolism]

Probab=98.49  E-value=7.7e-08  Score=70.12  Aligned_cols=67  Identities=21%  Similarity=0.254  Sum_probs=61.4

Q ss_pred             hhcccccceeeehhhHHhCCCCCC--CCCccchhhhHHHHHHHHHHHHHhhhHhhccccccchhhhcCCCCC
Q psy16922          5 IEKNENLLTSKIVSLENNMKQPAD--YRKPCGVFNIGMVFITCLYGFTGLVGYMKYGAATQGSVTLNLPKTS   74 (75)
Q Consensus         5 ~~~~~~~g~~vv~~i~~~Mk~p~~--f~~~~~vl~~s~~i~~~ly~~~G~~GYl~fG~~v~~~I~lnlp~~~   74 (75)
                      +..+++++|+.++++.++|+++++  .+|   +...+..+..++|..+++++|..+|+++.++++.+.|+++
T Consensus       201 v~vfsF~~h~~i~si~~~~~~~~~~~~~k---~~~~~~~~~~vlyi~~~~~~~~~~~~~~~~~il~~~~~~~  269 (415)
T COG0814         201 VFVFSFGFHGNIPSLVNYMRKNSKKAVRK---AILIGSLIALVLYILVGFFVFGCFGSLVFGNILAAKEQNI  269 (415)
T ss_pred             HHHhhhhCCccchHHHHHhccchhHHHHH---HHHHHHHHHHHHHHHHHHHHHHhcCcccHHHHHHccCchH
Confidence            467899999999999999999875  554   9999999999999999999999999999999999998764

>TIGR00837 araaP aromatic amino acid transport protein

Probab=90.05  E-value=0.1  Score=37.04  Aligned_cols=46  Identities=15%  Similarity=0.067  Sum_probs=33.7

Q ss_pred             cccceeeehhhHHhCCCC-CCCCCccchhhhHHHHHHHHHHHHHhhhHhh
Q psy16922          9 ENLLTSKIVSLENNMKQP-ADYRKPCGVFNIGMVFITCLYGFTGLVGYMK   57 (75)
Q Consensus         9 ~~~g~~vv~~i~~~Mk~p-~~f~~~~~vl~~s~~i~~~ly~~~G~~GYl~   57 (75)
                      ++..+++++++..++++| ++.+   +.+..+..+++++|+.+.......
T Consensus       190 ~fg~~~~i~~~~~~~~~~~k~i~---raii~g~~i~~~lY~l~~~~~~g~  236 (381)
T TIGR00837       190 SFGFHGNVPSLYKYYDGNVKKVK---KSILIGSAIALVLYILWQLATMGN  236 (381)
T ss_pred             HHHcccccHHHHHHhccCHHHHH---HHHHHHHHHHHHHHHHHHHHHhCC
Confidence            455556789999999754 4444   599999999999999885543333

aromatic amino acid transporters and includes the tyrosine permease, TyrP, of E. coli, and the tryptophan transporters TnaB and Mtr of E. coli.

>PRK11021 putative transporter; Provisional

Probab=88.10  E-value=0.34  Score=34.79  Aligned_cols=45  Identities=16%  Similarity=0.221  Sum_probs=37.5

Q ss_pred             hhcccccceeeehhhHHhCCCCC-CCCCccchhhhHHHHHHHHHHHHHh
Q psy16922          5 IEKNENLLTSKIVSLENNMKQPA-DYRKPCGVFNIGMVFITCLYGFTGL   52 (75)
Q Consensus         5 ~~~~~~~g~~vv~~i~~~Mk~p~-~f~~~~~vl~~s~~i~~~ly~~~G~   52 (75)
                      +..++|.|.-.....-.|+|||+ +.|   +.+..+..++.++|+....
T Consensus       185 ~~~~af~G~e~~~~~a~E~k~P~k~iP---rAi~~~~~~~~~lYil~~~  230 (410)
T PRK11021        185 VMFWCFVGIEAFAHLASEFKNPERDFP---RALMIGLLLAGLVYWACTV  230 (410)
T ss_pred             HHHHHHhcHHHHHhhHHhccCcccccc---HHHHHHHHHHHHHHHHHHH
Confidence            35678888888999999999996 455   5999999999999998764

>TIGR00912 2A0309 spore germination protein (amino acid permease)

Probab=86.71  E-value=0.28  Score=34.51  Aligned_cols=55  Identities=13%  Similarity=0.047  Sum_probs=44.0

Q ss_pred             hcccccceeeehhhHHhCCCCCCCCCccchhhhHHHHHHHHHHHHHhhhHhhcccccc
Q psy16922          6 EKNENLLTSKIVSLENNMKQPADYRKPCGVFNIGMVFITCLYGFTGLVGYMKYGAATQ   63 (75)
Q Consensus         6 ~~~~~~g~~vv~~i~~~Mk~p~~f~~~~~vl~~s~~i~~~ly~~~G~~GYl~fG~~v~   63 (75)
                      ..+++.|.-++.-+..++|+|++.+|   ....+..++..+|..+-...-..+|.+..
T Consensus       188 ~~~~f~g~~i~~~~~~~~~~~~~~~k---~~~~~~~~~~~ly~~~~~~~i~~lg~~~~  242 (359)
T TIGR00912       188 VTFAFGEIEIFFLLFPLLSKKKKIKK---SIIKAIIIGVLLYILTTFVSISVFGGNVT  242 (359)
T ss_pred             hhhhhHHHHHHHHHHHHhCChhhhHH---HHHHHHHHHHHHHHHHHHHHHheecHHHh
Confidence            44667788888888899999987765   88999999999999887777777776543

This model describes spore germination protein GerKB and paralogs from Bacillus subtilis, Clostridium tetani, and other known or predicted endospore-forming members of the Firmicutes (low-GC Gram positive bacteria). Members show some similarity to amino acid permeases.

>TIGR00906 2A0303 cationic amino acid transport permease

Probab=86.18  E-value=0.43  Score=36.19  Aligned_cols=46  Identities=9%  Similarity=-0.042  Sum_probs=38.2

Q ss_pred             hhcccccceeeehhhHHhCCCCCC-CCCccchhhhHHHHHHHHHHHHHhh
Q psy16922          5 IEKNENLLTSKIVSLENNMKQPAD-YRKPCGVFNIGMVFITCLYGFTGLV   53 (75)
Q Consensus         5 ~~~~~~~g~~vv~~i~~~Mk~p~~-f~~~~~vl~~s~~i~~~ly~~~G~~   53 (75)
                      ...++|.|.-.+...-.|+|||++ .|   +.+..++.+++++|+.+...
T Consensus       239 ~~~faf~Gfd~v~~~aeE~knP~r~iP---~aii~sl~i~~vlY~lv~~~  285 (557)
T TIGR00906       239 TCFFAFIGFDAIATTGEEVKNPQRAIP---IGIVTSLLVCFVAYFLMSAA  285 (557)
T ss_pred             HHHHHHhhHHHHHHhHHhccCcccccc---HHHHHHHHHHHHHHHHHHHH
Confidence            456788888889999999999975 55   58999999999999988653

>PRK10655 potE putrescine transporter; Provisional

Probab=84.72  E-value=0.63  Score=33.61  Aligned_cols=46  Identities=11%  Similarity=0.006  Sum_probs=37.7

Q ss_pred             hhcccccceeeehhhHHhCCCCC-CCCCccchhhhHHHHHHHHHHHHHhh
Q psy16922          5 IEKNENLLTSKIVSLENNMKQPA-DYRKPCGVFNIGMVFITCLYGFTGLV   53 (75)
Q Consensus         5 ~~~~~~~g~~vv~~i~~~Mk~p~-~f~~~~~vl~~s~~i~~~ly~~~G~~   53 (75)
                      ...+++.|.-....+-.|+|||+ +.|   +.+..+..++.++|++....
T Consensus       197 ~~~~af~G~e~~~~~a~E~k~P~r~iP---rAi~~~~~~~~~~Y~l~~~~  243 (438)
T PRK10655        197 MTLWAFLGLESACANSDAVENPERNVP---IAVLGGTLGAAVIYIVSTNV  243 (438)
T ss_pred             HHHHHHhhhhhhhhhHHHhhCcccccc---HHHHHHHHHHHHHHHHHHHH
Confidence            45678888888999999999997 455   59999999999999886543

>PRK10435 cadB lysine/cadaverine antiporter; Provisional

Probab=83.87  E-value=0.65  Score=33.73  Aligned_cols=46  Identities=11%  Similarity=-0.072  Sum_probs=37.5

Q ss_pred             hcccccceeeehhhHHhCCCCC-CCCCccchhhhHHHHHHHHHHHHHhhh
Q psy16922          6 EKNENLLTSKIVSLENNMKQPA-DYRKPCGVFNIGMVFITCLYGFTGLVG   54 (75)
Q Consensus         6 ~~~~~~g~~vv~~i~~~Mk~p~-~f~~~~~vl~~s~~i~~~ly~~~G~~G   54 (75)
                      ..++|.|.-.....-.|+|||+ +.||   .+..+..++.++|++....-
T Consensus       196 ~~faf~G~E~~~~~a~E~knP~r~iPr---Ai~~~~~iv~ilYil~~~~~  242 (435)
T PRK10435        196 CLWAFVGVESAAVSTGMVKNPKRTVPL---ATMLGTGLAGIIYIAATQVI  242 (435)
T ss_pred             HHHHHhhHHHHHHHHHHhhCccccccH---HHHHHHHHHHHHHHHHHHHH
Confidence            4567778888888999999995 5665   89999999999999886643

>KOG1287|consensus

Probab=83.71  E-value=0.88  Score=34.55  Aligned_cols=46  Identities=11%  Similarity=0.057  Sum_probs=37.2

Q ss_pred             cccccceeeehhhHHhCCCCCCCCCccchhhhHHHHHHHHHHHHHhhh
Q psy16922          7 KNENLLTSKIVSLENNMKQPADYRKPCGVFNIGMVFITCLYGFTGLVG   54 (75)
Q Consensus         7 ~~~~~g~~vv~~i~~~Mk~p~~f~~~~~vl~~s~~i~~~ly~~~G~~G   54 (75)
                      -++|.|--.+-.+-.|+|||+|  ..|+++..++.++++.|+++-+..
T Consensus       214 lfa~~GWd~lN~vteEiknP~k--tLP~Ai~isi~lvt~iYil~NvAy  259 (479)
T KOG1287|consen  214 LFAFSGWDYLNYVTEEIKNPRR--TLPRAILISIPLVTVIYVLVNVAY  259 (479)
T ss_pred             hhcccCchhhccchHhhcCccc--cchHHHHHhhHHHHHHHHHhHhhe
Confidence            3677888888888999999953  344699999999999999986643

>TIGR00909 2A0306 amino acid transporter

Probab=81.69  E-value=0.98  Score=32.38  Aligned_cols=45  Identities=18%  Similarity=0.221  Sum_probs=36.0

Q ss_pred             hcccccceeeehhhHHhCCCCC-CCCCccchhhhHHHHHHHHHHHHHhh
Q psy16922          6 EKNENLLTSKIVSLENNMKQPA-DYRKPCGVFNIGMVFITCLYGFTGLV   53 (75)
Q Consensus         6 ~~~~~~g~~vv~~i~~~Mk~p~-~f~~~~~vl~~s~~i~~~ly~~~G~~   53 (75)
                      ..+++.|.-.....-.|+|||+ +.|   +.+..++.++.++|+.+...
T Consensus       204 ~~~af~G~e~~~~~~~E~~~p~r~ip---~ai~~~~~~~~v~Yil~~~~  249 (429)
T TIGR00909       204 VFFAFIGFEAISTAAEEVKNPERDIP---KAIILSLIVVTLLYVLVAAV  249 (429)
T ss_pred             HHHHHhhHHHHHhhHHhccCcccccc---HHHHHHHHHHHHHHHHHHHH
Confidence            4567777777888899999995 455   49999999999999988643

>COG0531 PotE Amino acid transporters [Amino acid transport and metabolism]

Probab=81.50  E-value=1  Score=32.22  Aligned_cols=53  Identities=17%  Similarity=0.132  Sum_probs=40.4

Q ss_pred             hhcccccceeeehhhHHhCCCCC-CCCCccchhhhHHHHHHHHHHHHHhhhHhhccc
Q psy16922          5 IEKNENLLTSKIVSLENNMKQPA-DYRKPCGVFNIGMVFITCLYGFTGLVGYMKYGA   60 (75)
Q Consensus         5 ~~~~~~~g~~vv~~i~~~Mk~p~-~f~~~~~vl~~s~~i~~~ly~~~G~~GYl~fG~   60 (75)
                      ...+++.|.....+.-+|+|||+ +.|   +.+..++.++.++|+.....--...++
T Consensus       209 ~~~~~f~G~e~~~~~a~E~knp~r~ip---~aii~~~~~~~~~y~~~~~~~~~~~~~  262 (466)
T COG0531         209 LAFFAFTGFEAIATLAEEVKNPKRTIP---RAIILSLLIVLILYILGALVIVGVLPA  262 (466)
T ss_pred             HHHHHhhcHHHHHHHHHHhcCcccccc---HHHHHHHHHHHHHHHHHHHHHHhCccH
Confidence            34567888888888999999995 445   488888899999999887655544444

>PRK11357 frlA putative fructoselysine transporter; Provisional

Probab=81.46  E-value=0.92  Score=32.89  Aligned_cols=45  Identities=13%  Similarity=0.180  Sum_probs=37.3

Q ss_pred             hhcccccceeeehhhHHhCCCCCC-CCCccchhhhHHHHHHHHHHHHHh
Q psy16922          5 IEKNENLLTSKIVSLENNMKQPAD-YRKPCGVFNIGMVFITCLYGFTGL   52 (75)
Q Consensus         5 ~~~~~~~g~~vv~~i~~~Mk~p~~-f~~~~~vl~~s~~i~~~ly~~~G~   52 (75)
                      ...++|.|.-.....-.|+|||+| .|   +.+..++.+++++|++...
T Consensus       203 ~~~~af~G~e~~~~~a~E~k~P~r~iP---~Ai~~~~~i~~~~Y~l~~~  248 (445)
T PRK11357        203 ATSWSYTGMASICYMTGEIKNPGKTMP---RALIGSCLLVLVLYTLLAL  248 (445)
T ss_pred             HHHHHHhhHHHHHhhHHHhcCccccch---HHHHHHHHHHHHHHHHHHH
Confidence            346788888889999999999974 45   5999999999999988755

>TIGR00911 2A0308 L-type amino acid transporter

Probab=80.63  E-value=0.79  Score=33.86  Aligned_cols=45  Identities=16%  Similarity=0.085  Sum_probs=36.6

Q ss_pred             hcccccceeeehhhHHhCCCCCC-CCCccchhhhHHHHHHHHHHHHHhh
Q psy16922          6 EKNENLLTSKIVSLENNMKQPAD-YRKPCGVFNIGMVFITCLYGFTGLV   53 (75)
Q Consensus         6 ~~~~~~g~~vv~~i~~~Mk~p~~-f~~~~~vl~~s~~i~~~ly~~~G~~   53 (75)
                      ..++|.|.-.....-.|+|||++ .|   +.+..+..++.++|+++...
T Consensus       244 ~~~af~G~e~~~~~a~E~knP~r~iP---rAi~~s~~~v~~~Y~l~~~a  289 (501)
T TIGR00911       244 GIWAYGGWNYLNFVTEEVKNPYRTLP---IAIIISMPIVTFIYVLTNIA  289 (501)
T ss_pred             HHHHHHhHHHHhhhHHHhcCchhhhH---HHHHHHHHHHHHHHHHHHHH
Confidence            45677888888889999999964 55   49999999999999998543

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	75
4djk_A	511	Probable glutamate/gamma-aminobutyrate antiporter;	90.09
3gia_A	444	Uncharacterized protein MJ0609; membrane protein,	90.08
3l1l_A	445	Arginine/agmatine antiporter; TCDB 2.A.3.2.5, ADIC	88.01

>4djk_A Probable glutamate/gamma-aminobutyrate antiporter; LEUT, glutamate-GABA antiporter, transport protein; 3.10A {Escherichia coli} PDB: 4dji_A

Probab=90.09  E-value=0.11  Score=36.48  Aligned_cols=52  Identities=21%  Similarity=0.142  Sum_probs=41.2

Q ss_pred             hcccccceeeehhhHHhCCCCCC-CCCccchhhhHHHHHHHHHHHHHhhhHhhccc
Q psy16922          6 EKNENLLTSKIVSLENNMKQPAD-YRKPCGVFNIGMVFITCLYGFTGLVGYMKYGA   60 (75)
Q Consensus         6 ~~~~~~g~~vv~~i~~~Mk~p~~-f~~~~~vl~~s~~i~~~ly~~~G~~GYl~fG~   60 (75)
                      ..++|.|.-.....-.|+|||++ .|   +.+..++.+++++|+...+.-....++
T Consensus       210 ~~~a~~G~e~~~~~a~E~k~P~k~ip---~ai~~~~~~~~~~y~~~~~~~~~~~~~  262 (511)
T 4djk_A          210 FILSYMGVEASATHVNEMSNPGRDYP---LAMLLLMVAAICLSSVGGLSIAMVIPG  262 (511)
T ss_dssp             HHHHHTTGGGGTGGGSSSSCCTTTHH---HHHHHHHHHHHHHHHHHHHHHHTTSCT
T ss_pred             HHHHHhhHHHHHHHHHhccCcccchh---HHHHHHHHHHHHHHHHHHHHHHeecCH
Confidence            45778888889999999999964 45   489999999999999887755555554

>3gia_A Uncharacterized protein MJ0609; membrane protein, transporter, cell membrane, membrane, transmembrane, transport protein; HET: D10 BCN; 2.32A {Methanocaldococcus jannaschii} PDB: 3gi9_C* 3gi8_C

Probab=90.08  E-value=0.041  Score=38.09  Aligned_cols=52  Identities=10%  Similarity=0.096  Sum_probs=40.9

Q ss_pred             hhcccccceeeehhhHHhCCCCCC-CCCccchhhhHHHHHHHHHHHHHhhhHhhcc
Q psy16922          5 IEKNENLLTSKIVSLENNMKQPAD-YRKPCGVFNIGMVFITCLYGFTGLVGYMKYG   59 (75)
Q Consensus         5 ~~~~~~~g~~vv~~i~~~Mk~p~~-f~~~~~vl~~s~~i~~~ly~~~G~~GYl~fG   59 (75)
                      +..+++.|.-.....-.|+|||++ .||   .+..+..+++++|+.....-....+
T Consensus       196 ~~~~a~~G~e~~~~~~~e~k~P~r~ip~---ai~~~~~~~~~~y~~~~~~~~~~~~  248 (444)
T 3gia_A          196 IFFLSYMGFGVITNASEHIENPKKNVPR---AIFISILIVMFVYVGVAISAIGNLP  248 (444)
T ss_dssp             HGGGGGTHHHHHHTTGGGBSSHHHHHHH---HHHHHHHHHHHHHHHHHHHHHTTSC
T ss_pred             HHHHHHHhHHHHHHHHHHccCcccchhH---HHHHHHHHHHHHHHHHHHHHHhCCC
Confidence            346889999999999999999964 564   8899999999999987665433333

>3l1l_A Arginine/agmatine antiporter; TCDB 2.A.3.2.5, ADIC, Arg-bound, amino-acid transport, cell inner membrane, cell membrane, membrane; HET: ARG BNG; 3.00A {Escherichia coli} PDB: 3h5m_A* 3h6b_A 3lrb_A 3lrc_A 3ob6_A* 3hqk_A 3ncy_A

Probab=88.01  E-value=0.093  Score=36.21  Aligned_cols=52  Identities=8%  Similarity=-0.072  Sum_probs=41.7

Q ss_pred             hcccccceeeehhhHHhCCCCC-CCCCccchhhhHHHHHHHHHHHHHhhhHhhccc
Q psy16922          6 EKNENLLTSKIVSLENNMKQPA-DYRKPCGVFNIGMVFITCLYGFTGLVGYMKYGA   60 (75)
Q Consensus         6 ~~~~~~g~~vv~~i~~~Mk~p~-~f~~~~~vl~~s~~i~~~ly~~~G~~GYl~fG~   60 (75)
                      ..+++.|.-.....-.|+|||+ +.||   .+..+..++.++|+.....-....+.
T Consensus       200 ~~~af~G~e~~~~~~~e~k~p~r~ip~---a~~~~~~~~~~~y~~~~~~~~~~~~~  252 (445)
T 3l1l_A          200 TLWSFIGVESASVAAGVVKNPKRNVPI---ATIGGVLIAAVCYVLSTTAIMGMIPN  252 (445)
T ss_dssp             HHHTTTTTTHHHHGGGGBSSHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHSCT
T ss_pred             HHHHHHhHHHHHHHHHHhcCccccccH---HHHHHHHHHHHHHHHHHHHHHhcCCH
Confidence            4678888888999999999995 4554   88999999999999987765555554

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00