Psyllid ID: psy17212

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100--
Protein Sequence
MGNCYKRELSQTSVIIGLGHGKTHKDAASVRATHPIPPSCGLYYFEVKIVSKGRDGYMGIGLSAQDVNMNRLPGKYLSCGLYFEVKIVSKGWDGYMGIGMSA
Secondary Structure (PSIPRED)
cccccEEEEcccccEEEEccccccccEEEEEcccccccccccEEEEEEEEEcccccEEEEEccccccccccccccccccEEEEEEEEEEEcccccEEccccc
Secondary Structure Prediction (SSPRO)
cccccEEEEEcccEEEEEcccccccccEEEEcccccccccEEEEEEEEEEEcccccEEEEEEcccccccccccccccccccccccccccccccccccccccc
Coil and Loop (DISEMBL)
mgncykrelsQTSVIIglghgkthkdaasvrathpippscglyYFEVKIVskgrdgymgiglsaqdvnmnrlpgkylscgLYFEVKIVSkgwdgymgigmsa
Flexible Loop (DISEMBL)
mgncykrelSQTSVIIGLGHGKTHKDAASVRAThpippscglYYFEVKIVSKGRDGYMGIGLSAQDVNMNRLPGKYLSCGLYFEVKIVSKGWDGYMGIGMSA
Low Complexity Region (SEG)
MGNCYKRELSQTSVIIGLGHGKTHKDAASVRATHPIPPSCGLYYFEVKIVSKGRDGYMGIGLSAQDVNMNRLPGKYLSCGLYFEVKIVSKGWDGYMGIGMSA
Disordered region (IsUnstruct)
***********TSVIIGLGHGKTHKDAASVRATHPIPPSCGLYYFEVKIVSKGRDGYMGIGLSAQDVNMNRLPGKYLSCGLYFEVKIVSKGWDGYMGI****
Disordered Region (DISOPRED)
****YKR*LSQTSVIIG****KTHKDAASVRATHPIPPSCGLYYFEVKIVSKGRDGYMGIGLSAQDVNMNRLPGKYLSCGLYFEVKIVSKGWDGYMGIG***
Disordered Region (DISEMBL)
MGNCYKRELSQTSVIIGLG*********SVRATHPIPPSCGLYYFEVKIVSKGRDGYMGIGLSAQDVNMNRLPGKYLSCGLYFEVKIVSKGWDGYMGIGMSA
Disordered Region (DISPRO)
*GNCYKRELSQTSVIIGLGHGKTHKDAASVRATHPIPPSCGLYYFEVKIVSKGRDGYMGIGLSAQDVNMNRLPGKYLSCGLYFEVKIVSKGWDGYMGIGMS*
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MGNCYKRELSQTSVIIGLGHGKTHKDAASVRATHPIPPSCGLYYFEVKIVSKGRDGYMGIGLSAQDVNMNRLPGKYLSCGLYFEVKIVSKGWDGYMGIGMSA
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	102	2.2.26 [Sep-21-2011]
Q1LUS8	604	Ran-binding protein 10 OS	yes	N/A	0.549	0.092	0.910	1e-25
Q6VN20	620	Ran-binding protein 10 OS	yes	N/A	0.549	0.090	0.910	2e-25
Q6VN19	620	Ran-binding protein 10 OS	yes	N/A	0.549	0.090	0.910	2e-25
A3KMV8	620	Ran-binding protein 10 OS	no	N/A	0.549	0.090	0.910	3e-25
Q96S59	729	Ran-binding protein 9 OS=	no	N/A	0.549	0.076	0.910	6e-25
P69566	653	Ran-binding protein 9 OS=	no	N/A	0.549	0.085	0.910	7e-25
A1L252	597	Ran-binding protein 9 OS=	no	N/A	0.647	0.110	0.791	8e-24
Q9PTY5	548	Ran-binding protein 9 OS=	N/A	N/A	0.549	0.102	0.821	3e-23
Q28FM1	548	Ran-binding protein 9 OS=	yes	N/A	0.549	0.102	0.803	2e-22
Q4Z8K6	962	Ran-binding proteins 9/10	yes	N/A	0.696	0.073	0.638	5e-21

>sp|Q1LUS8|RBP10_DANRE Ran-binding protein 10 OS=Danio rerio GN=ranbp10 PE=3 SV=1

 Score =  115 bits (287), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 51/56 (91%), Positives = 53/56 (94%)

Query: 19  GHGKTHKDAASVRATHPIPPSCGLYYFEVKIVSKGRDGYMGIGLSAQDVNMNRLPG 74
           GHGK HKDAASVRATHPIP +CG+YYFEVKIVSKGRDGYMGIGLSAQ VNMNRLPG
Sbjct: 67  GHGKNHKDAASVRATHPIPAACGIYYFEVKIVSKGRDGYMGIGLSAQGVNMNRLPG 122

May act as an adapter protein to couple membrane receptors to intracellular signaling pathways.
Danio rerio (taxid: 7955)

>sp|Q6VN20|RBP10_HUMAN Ran-binding protein 10 OS=Homo sapiens GN=RANBP10 PE=1 SV=1

 Score =  114 bits (285), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 51/56 (91%), Positives = 53/56 (94%)

Query: 19  GHGKTHKDAASVRATHPIPPSCGLYYFEVKIVSKGRDGYMGIGLSAQDVNMNRLPG 74
           GHGK HKDAASVRATHPIP +CG+YYFEVKIVSKGRDGYMGIGLSAQ VNMNRLPG
Sbjct: 79  GHGKNHKDAASVRATHPIPAACGIYYFEVKIVSKGRDGYMGIGLSAQGVNMNRLPG 134

Acts as a guanine nucleotide exchange factor (GEF) for RAN GTPase (By similarity). May play an essential role in hemostasis and in maintaining microtubule dynamics with respect to both platelet shape and function (By similarity). May act as an adapter protein to couple membrane receptors to intracellular signaling pathways. Enhances dihydrotestosterone-induced transactivation activity of AR, as well as dexamethasone-induced transactivation activity of NR3C1, but does not affect estrogen-induced transactivation. In contrast to RANBP9, does not interact with Sos and does not activate the Ras pathway.

Homo sapiens (taxid: 9606)

>sp|Q6VN19|RBP10_MOUSE Ran-binding protein 10 OS=Mus musculus GN=Ranbp10 PE=1 SV=2

 Score =  114 bits (284), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 51/56 (91%), Positives = 53/56 (94%)

Query: 19  GHGKTHKDAASVRATHPIPPSCGLYYFEVKIVSKGRDGYMGIGLSAQDVNMNRLPG 74
           GHGK HKDAASVRATHPIP +CG+YYFEVKIVSKGRDGYMGIGLSAQ VNMNRLPG
Sbjct: 79  GHGKNHKDAASVRATHPIPAACGIYYFEVKIVSKGRDGYMGIGLSAQGVNMNRLPG 134

May act as an adapter protein to couple membrane receptors to intracellular signaling pathways (By similarity). Enhances dihydrotestosterone-induced transactivation activity of AR, as well as dexamethasone-induced transactivation activity of NR3C1, but does not affect estrogen-induced transactivation (By similarity). Acts as a guanine nucleotide exchange factor (GEF) for RAN GTPase. May play an essential role in hemostasis and in maintaining microtubule dynamics with respect to both platelet shape and function.

Mus musculus (taxid: 10090)

>sp|A3KMV8|RBP10_BOVIN Ran-binding protein 10 OS=Bos taurus GN=RANBP10 PE=2 SV=1

 Score =  113 bits (283), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 51/56 (91%), Positives = 53/56 (94%)

Query: 19  GHGKTHKDAASVRATHPIPPSCGLYYFEVKIVSKGRDGYMGIGLSAQDVNMNRLPG 74
           GHGK HKDAASVRATHPIP +CG+YYFEVKIVSKGRDGYMGIGLSAQ VNMNRLPG
Sbjct: 79  GHGKNHKDAASVRATHPIPAACGIYYFEVKIVSKGRDGYMGIGLSAQGVNMNRLPG 134

Acts as a guanine nucleotide exchange factor (GEF) for RAN GTPase. May play an essential role in hemostasis and in maintaining microtubule dynamics with respect to both platelet shape and function. May act as an adapter protein to couple membrane receptors to intracellular signaling pathways. Enhances dihydrotestosterone-induced transactivation activity of AR, as well as dexamethasone-induced transactivation activity of NR3C1.

Bos taurus (taxid: 9913)

>sp|Q96S59|RANB9_HUMAN Ran-binding protein 9 OS=Homo sapiens GN=RANBP9 PE=1 SV=1

 Score =  112 bits (281), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 51/56 (91%), Positives = 53/56 (94%)

Query: 19  GHGKTHKDAASVRATHPIPPSCGLYYFEVKIVSKGRDGYMGIGLSAQDVNMNRLPG 74
           GHGKT KDAASVRATHPIP +CG+YYFEVKIVSKGRDGYMGIGLSAQ VNMNRLPG
Sbjct: 191 GHGKTPKDAASVRATHPIPAACGIYYFEVKIVSKGRDGYMGIGLSAQGVNMNRLPG 246

May act as an adapter protein to couple membrane receptors to intracellular signaling pathways. May be involved in signaling of ITGB2/LFA-1 and other integrins. Enhances HGF-MET signaling by recruiting Sos and activating the Ras pathway. Enhances dihydrotestosterone-induced transactivation activity of AR, as well as dexamethasone-induced transactivation activity of NR3C1, but not affect estrogen-induced transactivation. Stabilizes TP73 isoform Alpha, probably by inhibiting its ubiquitination, and increases its proapoptotic activity. Inhibits the kinase activity of DYRK1A and DYRK1B. Inhibits FMR1 binding to RNA.

Homo sapiens (taxid: 9606)

>sp|P69566|RANB9_MOUSE Ran-binding protein 9 OS=Mus musculus GN=Ranbp9 PE=1 SV=1

 Score =  112 bits (280), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 51/56 (91%), Positives = 53/56 (94%)

Query: 19  GHGKTHKDAASVRATHPIPPSCGLYYFEVKIVSKGRDGYMGIGLSAQDVNMNRLPG 74
           GHGKT KDAASVRATHPIP +CG+YYFEVKIVSKGRDGYMGIGLSAQ VNMNRLPG
Sbjct: 116 GHGKTPKDAASVRATHPIPAACGIYYFEVKIVSKGRDGYMGIGLSAQGVNMNRLPG 171

May act as an adapter protein to couple membrane receptors to intracellular signaling pathways. May be involved in signaling of ITGB2/LFA-1 and other integrins. Enhances HGF-MET signaling by recruiting Sos and activating the Ras pathway. Enhances dihydrotestosterone-induced transactivation activity of AR, as well as dexamethasone-induced transactivation activity of NR3C1, but not affect estrogen-induced transactivation (By similarity). Stabilizes TP73 isoform Alpha, probably by inhibiting its ubiquitination, and increases its proapoptotic activity. Inhibits the kinase activity of DYRK1A and DYRK1B. Inhibits FMR1 binding to RNA.

Mus musculus (taxid: 10090)

>sp|A1L252|RANB9_DANRE Ran-binding protein 9 OS=Danio rerio GN=ranbp9 PE=2 SV=1

 Score =  108 bits (271), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 53/67 (79%), Positives = 59/67 (88%), Gaps = 1/67 (1%)

Query: 9   LSQTSVIIGL-GHGKTHKDAASVRATHPIPPSCGLYYFEVKIVSKGRDGYMGIGLSAQDV 67
           LSQ ++ +   GHGKT KDAASVRATHPIP +CG+YYFEVKI+SKGRDGYMGIGLSAQ V
Sbjct: 62  LSQNNLRVHYKGHGKTPKDAASVRATHPIPAACGVYYFEVKIISKGRDGYMGIGLSAQGV 121

Query: 68  NMNRLPG 74
           NMNRLPG
Sbjct: 122 NMNRLPG 128

May act as an adapter protein to couple membrane receptors to intracellular signaling pathways.

Danio rerio (taxid: 7955)

>sp|Q9PTY5|RANB9_XENLA Ran-binding protein 9 OS=Xenopus laevis GN=ranbp9 PE=2 SV=1

 Score =  107 bits (266), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 46/56 (82%), Positives = 52/56 (92%)

Query: 19  GHGKTHKDAASVRATHPIPPSCGLYYFEVKIVSKGRDGYMGIGLSAQDVNMNRLPG 74
           GHGKT KDAASVR+THPIP +CG++YFEVKI+SKGRDGYMGIGLS Q VN+NRLPG
Sbjct: 46  GHGKTSKDAASVRSTHPIPAACGIFYFEVKIISKGRDGYMGIGLSTQGVNLNRLPG 101

May act as an adapter protein to couple membrane receptors to intracellular signaling pathways.

Xenopus laevis (taxid: 8355)

>sp|Q28FM1|RANB9_XENTR Ran-binding protein 9 OS=Xenopus tropicalis GN=ranbp9 PE=2 SV=1

 Score =  104 bits (259), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 45/56 (80%), Positives = 52/56 (92%)

Query: 19  GHGKTHKDAASVRATHPIPPSCGLYYFEVKIVSKGRDGYMGIGLSAQDVNMNRLPG 74
           GHGKT KDAASVR+THPIP +CG++YFEVKI+SKGRDGYMGIGLS Q VN++RLPG
Sbjct: 46  GHGKTSKDAASVRSTHPIPAACGIFYFEVKIISKGRDGYMGIGLSTQGVNLSRLPG 101

May act as an adapter protein to couple membrane receptors to intracellular signaling pathways.

Xenopus tropicalis (taxid: 8364)

>sp|Q4Z8K6|RBP9X_DROME Ran-binding proteins 9/10 homolog OS=Drosophila melanogaster GN=RanBPM PE=1 SV=1

 Score = 99.4 bits (246), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 46/72 (63%), Positives = 54/72 (75%), Gaps = 1/72 (1%)

Query: 4   CYKRELSQTSVIIGL-GHGKTHKDAASVRATHPIPPSCGLYYFEVKIVSKGRDGYMGIGL 62
           C    LSQ ++ +   G GK H DAASVR  +PIP SCGLYYFEV+I+SKGR+GYMGIGL
Sbjct: 428 CLSIGLSQNNLRVTYKGVGKQHSDAASVRTAYPIPSSCGLYYFEVRIISKGRNGYMGIGL 487

Query: 63  SAQDVNMNRLPG 74
           +AQ   MNRLPG
Sbjct: 488 TAQQFRMNRLPG 499

May be involved in JAK/STAT signaling. Isoform D is required for the proper arrangement of niche cells and is autonomously required for proper niche cell size, isoform C negatively regulates the adhesive properties of the niche. The germline stem cell (GSC) niche in ovaries is made up of two somatic cell types: 8-9 cells in a single-filed array make up the terminal filament (TF), and a tight cluster of 5 or 6 cap cells (CpC). Regulating the size and adhesive properties of the CpCs is an important component of the mechanism that controls their capacity to support stem cells, isoform C and isoform D are important factors in mediating this regulation. In contrast, isoform C acts as a positive regulator of cell adhesion in follicle cell epithelium.

Drosophila melanogaster (taxid: 7227)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	102
242015522	592	Ran-binding protein, putative [Pediculus	0.549	0.094	0.964	2e-26
47228164	693	unnamed protein product [Tetraodon nigro	0.921	0.135	0.510	1e-25
328708985	640	PREDICTED: ran-binding protein 9-like [A	0.647	0.103	0.835	1e-25
194385070	594	unnamed protein product [Homo sapiens]	0.549	0.094	0.910	2e-24
390477814	594	PREDICTED: ran-binding protein 10 isofor	0.549	0.094	0.910	2e-24
332227546	594	PREDICTED: ran-binding protein 10 isofor	0.549	0.094	0.910	2e-24
426382584	593	PREDICTED: ran-binding protein 10 isofor	0.549	0.094	0.910	2e-24
397482018	595	PREDICTED: ran-binding protein 10 isofor	0.549	0.094	0.910	3e-24
91083553	584	PREDICTED: similar to RAN binding protei	0.549	0.095	0.910	3e-24
403290519	594	PREDICTED: ran-binding protein 10 isofor	0.549	0.094	0.910	3e-24

>gi|242015522|ref|XP_002428402.1| Ran-binding protein, putative [Pediculus humanus corporis] gi|212513014|gb|EEB15664.1| Ran-binding protein, putative [Pediculus humanus corporis]

 Score =  123 bits (308), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 54/56 (96%), Positives = 55/56 (98%)

Query: 19  GHGKTHKDAASVRATHPIPPSCGLYYFEVKIVSKGRDGYMGIGLSAQDVNMNRLPG 74
           GHGKTHKDAASVRATHPIPP+CGLYYFEVKIVSKGRDGYMGIGLSAQ VNMNRLPG
Sbjct: 65  GHGKTHKDAASVRATHPIPPACGLYYFEVKIVSKGRDGYMGIGLSAQGVNMNRLPG 120

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|47228164|emb|CAF97793.1| unnamed protein product [Tetraodon nigroviridis]

 Score =  120 bits (301), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 74/145 (51%), Positives = 84/145 (57%), Gaps = 51/145 (35%)

Query: 9   LSQTSVIIGL-GHGKTHKDAASVRATHPIPPSCGLYYFEVKIVSKGRDGYMGIGLSAQDV 67
           LSQ ++ +   GHGKT KDAASVRATHPIP +CG+YYFEVKI+SKGRDGYMGIGLSAQ V
Sbjct: 62  LSQNNLRVHYKGHGKTPKDAASVRATHPIPAACGVYYFEVKIISKGRDGYMGIGLSAQGV 121

Query: 68  NMNRLP-----------------------------------GKY--------------LS 78
           NMNRLP                                   GK                +
Sbjct: 122 NMNRLPVNENETPLPRSWSPKDKFSYIGLSQNNLRVHYKGHGKTPKDAASVRATHPIPAA 181

Query: 79  CGL-YFEVKIVSKGWDGYMGIGMSA 102
           CG+ YFEVKI+SKG DGYMGIG+SA
Sbjct: 182 CGVYYFEVKIISKGRDGYMGIGLSA 206

Source: Tetraodon nigroviridis

Species: Tetraodon nigroviridis

Genus: Tetraodon

Family: Tetraodontidae

Order: Tetraodontiformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|328708985|ref|XP_001944125.2| PREDICTED: ran-binding protein 9-like [Acyrthosiphon pisum]

 Score =  120 bits (300), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 56/67 (83%), Positives = 60/67 (89%), Gaps = 1/67 (1%)

Query: 9   LSQTSVIIGL-GHGKTHKDAASVRATHPIPPSCGLYYFEVKIVSKGRDGYMGIGLSAQDV 67
           LSQ ++ +   GHGKTHKDAASVRATHPIP SCGLYYFEVKIVSKGRDGYMG+GLSAQ V
Sbjct: 79  LSQNNIRVHYKGHGKTHKDAASVRATHPIPASCGLYYFEVKIVSKGRDGYMGVGLSAQGV 138

Query: 68  NMNRLPG 74
           NMNRLPG
Sbjct: 139 NMNRLPG 145

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|194385070|dbj|BAG60941.1| unnamed protein product [Homo sapiens]

 Score =  116 bits (290), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 51/56 (91%), Positives = 53/56 (94%)

Query: 19  GHGKTHKDAASVRATHPIPPSCGLYYFEVKIVSKGRDGYMGIGLSAQDVNMNRLPG 74
           GHGK HKDAASVRATHPIP +CG+YYFEVKIVSKGRDGYMGIGLSAQ VNMNRLPG
Sbjct: 79  GHGKNHKDAASVRATHPIPAACGIYYFEVKIVSKGRDGYMGIGLSAQGVNMNRLPG 134

Source: Homo sapiens

Species: Homo sapiens

Genus: Homo

Family: Hominidae

Order: Primates

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|390477814|ref|XP_003735368.1| PREDICTED: ran-binding protein 10 isoform 2 [Callithrix jacchus]

 Score =  116 bits (290), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 51/56 (91%), Positives = 53/56 (94%)

Query: 19  GHGKTHKDAASVRATHPIPPSCGLYYFEVKIVSKGRDGYMGIGLSAQDVNMNRLPG 74
           GHGK HKDAASVRATHPIP +CG+YYFEVKIVSKGRDGYMGIGLSAQ VNMNRLPG
Sbjct: 79  GHGKNHKDAASVRATHPIPAACGIYYFEVKIVSKGRDGYMGIGLSAQGVNMNRLPG 134

Source: Callithrix jacchus

Species: Callithrix jacchus

Genus: Callithrix

Family: Cebidae

Order: Primates

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|332227546|ref|XP_003262952.1| PREDICTED: ran-binding protein 10 isoform 4 [Nomascus leucogenys]

 Score =  116 bits (290), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 51/56 (91%), Positives = 53/56 (94%)

Query: 19  GHGKTHKDAASVRATHPIPPSCGLYYFEVKIVSKGRDGYMGIGLSAQDVNMNRLPG 74
           GHGK HKDAASVRATHPIP +CG+YYFEVKIVSKGRDGYMGIGLSAQ VNMNRLPG
Sbjct: 79  GHGKNHKDAASVRATHPIPAACGIYYFEVKIVSKGRDGYMGIGLSAQGVNMNRLPG 134

Source: Nomascus leucogenys

Species: Nomascus leucogenys

Genus: Nomascus

Family: Hylobatidae

Order: Primates

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|426382584|ref|XP_004057884.1| PREDICTED: ran-binding protein 10 isoform 3 [Gorilla gorilla gorilla]

 Score =  116 bits (290), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 51/56 (91%), Positives = 53/56 (94%)

Query: 19  GHGKTHKDAASVRATHPIPPSCGLYYFEVKIVSKGRDGYMGIGLSAQDVNMNRLPG 74
           GHGK HKDAASVRATHPIP +CG+YYFEVKIVSKGRDGYMGIGLSAQ VNMNRLPG
Sbjct: 79  GHGKNHKDAASVRATHPIPAACGIYYFEVKIVSKGRDGYMGIGLSAQGVNMNRLPG 134

Source: Gorilla gorilla gorilla

Species: Gorilla gorilla

Genus: Gorilla

Family: Hominidae

Order: Primates

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|397482018|ref|XP_003812233.1| PREDICTED: ran-binding protein 10 isoform 3 [Pan paniscus]

 Score =  115 bits (289), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 51/56 (91%), Positives = 53/56 (94%)

Query: 19  GHGKTHKDAASVRATHPIPPSCGLYYFEVKIVSKGRDGYMGIGLSAQDVNMNRLPG 74
           GHGK HKDAASVRATHPIP +CG+YYFEVKIVSKGRDGYMGIGLSAQ VNMNRLPG
Sbjct: 79  GHGKNHKDAASVRATHPIPAACGIYYFEVKIVSKGRDGYMGIGLSAQGVNMNRLPG 134

Source: Pan paniscus

Species: Pan paniscus

Genus: Pan

Family: Hominidae

Order: Primates

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|91083553|ref|XP_966900.1| PREDICTED: similar to RAN binding protein 9 [Tribolium castaneum] gi|270007804|gb|EFA04252.1| hypothetical protein TcasGA2_TC014542 [Tribolium castaneum]

 Score =  115 bits (289), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 51/56 (91%), Positives = 54/56 (96%)

Query: 19  GHGKTHKDAASVRATHPIPPSCGLYYFEVKIVSKGRDGYMGIGLSAQDVNMNRLPG 74
           GHGKTH+DAASV+ATHPIP +CGLYYFEVKIVSKGRDGYMGIGLSAQ VNMNRLPG
Sbjct: 65  GHGKTHRDAASVQATHPIPAACGLYYFEVKIVSKGRDGYMGIGLSAQGVNMNRLPG 120

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|403290519|ref|XP_003936361.1| PREDICTED: ran-binding protein 10 isoform 2 [Saimiri boliviensis boliviensis]

 Score =  115 bits (288), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 51/56 (91%), Positives = 53/56 (94%)

Query: 19  GHGKTHKDAASVRATHPIPPSCGLYYFEVKIVSKGRDGYMGIGLSAQDVNMNRLPG 74
           GHGK HKDAASVRATHPIP +CG+YYFEVKIVSKGRDGYMGIGLSAQ VNMNRLPG
Sbjct: 79  GHGKNHKDAASVRATHPIPAACGIYYFEVKIVSKGRDGYMGIGLSAQGVNMNRLPG 134

Source: Saimiri boliviensis boliviensis

Species: Saimiri boliviensis

Genus: Saimiri

Family: Cebidae

Order: Primates

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	102
UNIPROTKB|A3KMV8	620	RANBP10 "Ran-binding protein 1	0.647	0.106	0.805	1.5e-23
UNIPROTKB|F1MSI0	620	RANBP10 "Ran-binding protein 1	0.647	0.106	0.805	1.5e-23
UNIPROTKB|F1PA66	620	RANBP10 "Uncharacterized prote	0.647	0.106	0.805	1.5e-23
UNIPROTKB|Q6VN20	620	RANBP10 "Ran-binding protein 1	0.647	0.106	0.805	1.5e-23
MGI|MGI:1921584	620	Ranbp10 "RAN binding protein 1	0.647	0.106	0.805	1.5e-23
UNIPROTKB|F1NUL5	641	RANBP10 "Uncharacterized prote	0.647	0.102	0.805	1.6e-23
RGD|1311587	648	Ranbp10 "RAN binding protein 1	0.647	0.101	0.805	1.6e-23
RGD|1561940	651	Ranbp9 "RAN binding protein 9"	0.647	0.101	0.805	3.5e-23
MGI|MGI:1928741	653	Ranbp9 "RAN binding protein 9"	0.647	0.101	0.805	3.5e-23
UNIPROTKB|F1P125	659	RANBP9 "Uncharacterized protei	0.647	0.100	0.805	3.6e-23

UNIPROTKB|A3KMV8 RANBP10 "Ran-binding protein 10" [Bos taurus (taxid:9913)]

 Score = 279 (103.3 bits), Expect = 1.5e-23, P = 1.5e-23
 Identities = 54/67 (80%), Positives = 59/67 (88%)

Query:     9 LSQTSVIIGL-GHGKTHKDAASVRATHPIPPSCGLYYFEVKIVSKGRDGYMGIGLSAQDV 67
             LSQ ++ +   GHGK HKDAASVRATHPIP +CG+YYFEVKIVSKGRDGYMGIGLSAQ V
Sbjct:    68 LSQGNLRVHYKGHGKNHKDAASVRATHPIPAACGIYYFEVKIVSKGRDGYMGIGLSAQGV 127

Query:    68 NMNRLPG 74
             NMNRLPG
Sbjct:   128 NMNRLPG 134

GO:0005829 "cytosol" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

UNIPROTKB|F1MSI0 RANBP10 "Ran-binding protein 10" [Bos taurus (taxid:9913)]

 Score = 279 (103.3 bits), Expect = 1.5e-23, P = 1.5e-23
 Identities = 54/67 (80%), Positives = 59/67 (88%)

Query:     9 LSQTSVIIGL-GHGKTHKDAASVRATHPIPPSCGLYYFEVKIVSKGRDGYMGIGLSAQDV 67
             LSQ ++ +   GHGK HKDAASVRATHPIP +CG+YYFEVKIVSKGRDGYMGIGLSAQ V
Sbjct:    68 LSQGNLRVHYKGHGKNHKDAASVRATHPIPAACGIYYFEVKIVSKGRDGYMGIGLSAQGV 127

Query:    68 NMNRLPG 74
             NMNRLPG
Sbjct:   128 NMNRLPG 134

GO:0048487 "beta-tubulin binding" evidence=IEA

GO:0008536 "Ran GTPase binding" evidence=IEA

GO:0005881 "cytoplasmic microtubule" evidence=IEA

GO:0005087 "Ran guanyl-nucleotide exchange factor activity" evidence=IEA

GO:0000226 "microtubule cytoskeleton organization" evidence=IEA

UNIPROTKB|F1PA66 RANBP10 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 279 (103.3 bits), Expect = 1.5e-23, P = 1.5e-23
 Identities = 54/67 (80%), Positives = 59/67 (88%)

Query:     9 LSQTSVIIGL-GHGKTHKDAASVRATHPIPPSCGLYYFEVKIVSKGRDGYMGIGLSAQDV 67
             LSQ ++ +   GHGK HKDAASVRATHPIP +CG+YYFEVKIVSKGRDGYMGIGLSAQ V
Sbjct:    68 LSQGNLRVHYKGHGKNHKDAASVRATHPIPAACGIYYFEVKIVSKGRDGYMGIGLSAQGV 127

Query:    68 NMNRLPG 74
             NMNRLPG
Sbjct:   128 NMNRLPG 134

GO:0048487 "beta-tubulin binding" evidence=IEA

GO:0008536 "Ran GTPase binding" evidence=IEA

GO:0005881 "cytoplasmic microtubule" evidence=IEA

GO:0005087 "Ran guanyl-nucleotide exchange factor activity" evidence=IEA

GO:0000226 "microtubule cytoskeleton organization" evidence=IEA

UNIPROTKB|Q6VN20 RANBP10 "Ran-binding protein 10" [Homo sapiens (taxid:9606)]

 Score = 279 (103.3 bits), Expect = 1.5e-23, P = 1.5e-23
 Identities = 54/67 (80%), Positives = 59/67 (88%)

Query:     9 LSQTSVIIGL-GHGKTHKDAASVRATHPIPPSCGLYYFEVKIVSKGRDGYMGIGLSAQDV 67
             LSQ ++ +   GHGK HKDAASVRATHPIP +CG+YYFEVKIVSKGRDGYMGIGLSAQ V
Sbjct:    68 LSQGNLRVHYKGHGKNHKDAASVRATHPIPAACGIYYFEVKIVSKGRDGYMGIGLSAQGV 127

Query:    68 NMNRLPG 74
             NMNRLPG
Sbjct:   128 NMNRLPG 134

GO:0000226 "microtubule cytoskeleton organization" evidence=IEA

GO:0005087 "Ran guanyl-nucleotide exchange factor activity" evidence=IEA

GO:0005881 "cytoplasmic microtubule" evidence=IEA

GO:0008536 "Ran GTPase binding" evidence=IEA

GO:0048487 "beta-tubulin binding" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005829 "cytosol" evidence=IEA

MGI|MGI:1921584 Ranbp10 "RAN binding protein 10" [Mus musculus (taxid:10090)]

 Score = 279 (103.3 bits), Expect = 1.5e-23, P = 1.5e-23
 Identities = 54/67 (80%), Positives = 59/67 (88%)

Query:     9 LSQTSVIIGL-GHGKTHKDAASVRATHPIPPSCGLYYFEVKIVSKGRDGYMGIGLSAQDV 67
             LSQ ++ +   GHGK HKDAASVRATHPIP +CG+YYFEVKIVSKGRDGYMGIGLSAQ V
Sbjct:    68 LSQGNLRVHYKGHGKNHKDAASVRATHPIPAACGIYYFEVKIVSKGRDGYMGIGLSAQGV 127

Query:    68 NMNRLPG 74
             NMNRLPG
Sbjct:   128 NMNRLPG 134

GO:0000226 "microtubule cytoskeleton organization" evidence=IMP

GO:0005087 "Ran guanyl-nucleotide exchange factor activity" evidence=IDA

GO:0005634 "nucleus" evidence=IEA

GO:0005737 "cytoplasm" evidence=IDA

GO:0005881 "cytoplasmic microtubule" evidence=IDA

GO:0008536 "Ran GTPase binding" evidence=IPI

GO:0048487 "beta-tubulin binding" evidence=IDA

GO:0050790 "regulation of catalytic activity" evidence=IDA

UNIPROTKB|F1NUL5 RANBP10 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 279 (103.3 bits), Expect = 1.6e-23, P = 1.6e-23
 Identities = 54/67 (80%), Positives = 59/67 (88%)

Query:     9 LSQTSVIIGL-GHGKTHKDAASVRATHPIPPSCGLYYFEVKIVSKGRDGYMGIGLSAQDV 67
             LSQ ++ +   GHGK HKDAASVRATHPIP +CG+YYFEVKIVSKGRDGYMGIGLSAQ V
Sbjct:    88 LSQGNLRVHYKGHGKNHKDAASVRATHPIPAACGIYYFEVKIVSKGRDGYMGIGLSAQGV 147

Query:    68 NMNRLPG 74
             NMNRLPG
Sbjct:   148 NMNRLPG 154

GO:0000226 "microtubule cytoskeleton organization" evidence=IEA

GO:0005087 "Ran guanyl-nucleotide exchange factor activity" evidence=IEA

GO:0005881 "cytoplasmic microtubule" evidence=IEA

GO:0008536 "Ran GTPase binding" evidence=IEA

GO:0048487 "beta-tubulin binding" evidence=IEA

RGD|1311587 Ranbp10 "RAN binding protein 10" [Rattus norvegicus (taxid:10116)]

 Score = 279 (103.3 bits), Expect = 1.6e-23, P = 1.6e-23
 Identities = 54/67 (80%), Positives = 59/67 (88%)

Query:     9 LSQTSVIIGL-GHGKTHKDAASVRATHPIPPSCGLYYFEVKIVSKGRDGYMGIGLSAQDV 67
             LSQ ++ +   GHGK HKDAASVRATHPIP +CG+YYFEVKIVSKGRDGYMGIGLSAQ V
Sbjct:    96 LSQGNLRVHYKGHGKNHKDAASVRATHPIPAACGIYYFEVKIVSKGRDGYMGIGLSAQGV 155

Query:    68 NMNRLPG 74
             NMNRLPG
Sbjct:   156 NMNRLPG 162

GO:0000226 "microtubule cytoskeleton organization" evidence=IEA;ISO

GO:0005087 "Ran guanyl-nucleotide exchange factor activity" evidence=IEA;ISO

GO:0005737 "cytoplasm" evidence=ISO

GO:0005881 "cytoplasmic microtubule" evidence=IEA;ISO

GO:0008536 "Ran GTPase binding" evidence=IEA;ISO

GO:0048487 "beta-tubulin binding" evidence=IEA;ISO

GO:0050790 "regulation of catalytic activity" evidence=ISO

RGD|1561940 Ranbp9 "RAN binding protein 9" [Rattus norvegicus (taxid:10116)]

 Score = 276 (102.2 bits), Expect = 3.5e-23, P = 3.5e-23
 Identities = 54/67 (80%), Positives = 59/67 (88%)

Query:     9 LSQTSVIIGL-GHGKTHKDAASVRATHPIPPSCGLYYFEVKIVSKGRDGYMGIGLSAQDV 67
             LSQ ++ +   GHGKT KDAASVRATHPIP +CG+YYFEVKIVSKGRDGYMGIGLSAQ V
Sbjct:   102 LSQNNLRVHYKGHGKTPKDAASVRATHPIPAACGIYYFEVKIVSKGRDGYMGIGLSAQGV 161

Query:    68 NMNRLPG 74
             NMNRLPG
Sbjct:   162 NMNRLPG 168

GO:0005634 "nucleus" evidence=ISO

GO:0005737 "cytoplasm" evidence=ISO

GO:0019899 "enzyme binding" evidence=ISO

MGI|MGI:1928741 Ranbp9 "RAN binding protein 9" [Mus musculus (taxid:10090)]

 Score = 276 (102.2 bits), Expect = 3.5e-23, P = 3.5e-23
 Identities = 54/67 (80%), Positives = 59/67 (88%)

Query:     9 LSQTSVIIGL-GHGKTHKDAASVRATHPIPPSCGLYYFEVKIVSKGRDGYMGIGLSAQDV 67
             LSQ ++ +   GHGKT KDAASVRATHPIP +CG+YYFEVKIVSKGRDGYMGIGLSAQ V
Sbjct:   105 LSQNNLRVHYKGHGKTPKDAASVRATHPIPAACGIYYFEVKIVSKGRDGYMGIGLSAQGV 164

Query:    68 NMNRLPG 74
             NMNRLPG
Sbjct:   165 NMNRLPG 171

GO:0005515 "protein binding" evidence=IPI

GO:0005634 "nucleus" evidence=ISO;ISA

GO:0005737 "cytoplasm" evidence=ISA;IDA

GO:0005813 "centrosome" evidence=ISA

GO:0008536 "Ran GTPase binding" evidence=ISA

GO:0019899 "enzyme binding" evidence=ISO

UNIPROTKB|F1P125 RANBP9 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 276 (102.2 bits), Expect = 3.6e-23, P = 3.6e-23
 Identities = 54/67 (80%), Positives = 59/67 (88%)

Query:     9 LSQTSVIIGL-GHGKTHKDAASVRATHPIPPSCGLYYFEVKIVSKGRDGYMGIGLSAQDV 67
             LSQ ++ +   GHGKT KDAASVRATHPIP +CG+YYFEVKIVSKGRDGYMGIGLSAQ V
Sbjct:   110 LSQNNLRVHYKGHGKTPKDAASVRATHPIPAACGIYYFEVKIVSKGRDGYMGIGLSAQGV 169

Query:    68 NMNRLPG 74
             NMNRLPG
Sbjct:   170 NMNRLPG 176

GO:0005634 "nucleus" evidence=IEA

GO:0019899 "enzyme binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q6VN20	RBP10_HUMAN	No assigned EC number	0.9107	0.5490	0.0903	yes	N/A
Q96S59	RANB9_HUMAN	No assigned EC number	0.9107	0.5490	0.0768	no	N/A
Q6VN19	RBP10_MOUSE	No assigned EC number	0.9107	0.5490	0.0903	yes	N/A
Q1LUS8	RBP10_DANRE	No assigned EC number	0.9107	0.5490	0.0927	yes	N/A
Q4Z8K6	RBP9X_DROME	No assigned EC number	0.6388	0.6960	0.0738	yes	N/A
P69566	RANB9_MOUSE	No assigned EC number	0.9107	0.5490	0.0857	no	N/A
Q28FM1	RANB9_XENTR	No assigned EC number	0.8035	0.5490	0.1021	yes	N/A
A3KMV8	RBP10_BOVIN	No assigned EC number	0.9107	0.5490	0.0903	no	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	102
cd12909	153	cd12909, SPRY_RanBP9_10, SPRY domain in Ran bindin	4e-34
cd12885	132	cd12885, SPRY_RanBP_like, SPRY domain in Ran bindi	4e-14
cd12908	171	cd12908, SPRYD3, SPRY domain-containing protein 3	4e-06

>gnl|CDD|240489 cd12909, SPRY_RanBP9_10, SPRY domain in Ran binding proteins 9 and 10

 Score =  114 bits (288), Expect = 4e-34
 Identities = 44/56 (78%), Positives = 50/56 (89%)

Query: 19 GHGKTHKDAASVRATHPIPPSCGLYYFEVKIVSKGRDGYMGIGLSAQDVNMNRLPG 74
          G GKT KDAA+VRA HPIPP CG+YYFEVKI+SKGRDGY+GIGLS + VN+NRLPG
Sbjct: 12 GSGKTDKDAAAVRANHPIPPQCGIYYFEVKILSKGRDGYIGIGLSTKGVNLNRLPG 67

This family includes SPRY domain in Ran binding protein (RBP or RanBPM) 9 and 10, and similar proteins. RanBP9 (also known as RanBPM), a binding partner of Ran, is a small Ras-like GTPase that exerts multiple functions via interactions with various proteins. RanBP9 and RanBP10 also act as androgen receptor (AR) coactivators. Both consist of the N-terminal proline- and glutamine-rich regions, the SPRY domain, and LisH-CTLH and CRA motifs. SPRY domain of RanBPM forms a complex with CD39, a prototypic member of the NTPDase family, thus down-regulating activity substantially. RanBP10 enhances the transcriptional activity of AR in a ligand-dependent manner and exhibits a protein expression pattern different from RanBPM in various cell lines. RanBP10 is highly expressed in AR-positive prostate cancer LNCaP cells, while RanBPM is abundant in WI-38 and MCF-7 cells. Length = 153

>gnl|CDD|240465 cd12885, SPRY_RanBP_like, SPRY domain in Ran binding proteins, SSH4, HECT E3 and SPRYD3

 Score = 62.7 bits (153), Expect = 4e-14
 Identities = 22/47 (46%), Positives = 28/47 (59%)

Query: 28 ASVRATHPIPPSCGLYYFEVKIVSKGRDGYMGIGLSAQDVNMNRLPG 74
           SVRA HPIPP   ++YFEV I+  G  G + IG       +NR+PG
Sbjct: 1  GSVRADHPIPPKVPVFYFEVTILDLGEKGIVSIGFCTSGFPLNRMPG 47

This family includes SPRY domains found in Ran binding proteins (RBP or RanBPM) 9 and 10, SSH4 (suppressor of SHR3 null mutation protein 4), SPRY domain-containing protein 3 (SPRYD3) as well as HECT, a C-terminal catalytic domain of a subclass of ubiquitin-protein ligase (E3). RanBP9 and RanBP10 act as androgen receptor (AR) coactivators. Both consist of the N-terminal proline- and glutamine-rich regions, the SPRY domain, and LisH-CTLH and CRA motifs. The SPRY domain in SSH4 may be involved in cargo recognition, either directly or by combination with other adaptors, possibly leading to a higher selectivity. SPRYD3 is highly expressed in most tissues in humans, possibly involved in important cellular processes. HECT E3 mediates the direct transfer of ubiquitin from E2 to substrate. Length = 132

>gnl|CDD|240488 cd12908, SPRYD3, SPRY domain-containing protein 3

 Score = 42.3 bits (100), Expect = 4e-06
 Identities = 21/55 (38%), Positives = 29/55 (52%), Gaps = 2/55 (3%)

Query: 20 HGKTHKDAASVRATHPIPPSCGLYYFEVKIVSKGRDGYMGIGLSAQDVNMNRLPG 74
          HG    D    +A  P+ P    +YFEV+IV  G  G + IGL  +D  ++R PG
Sbjct: 17 HGNGIGDVGLAQARRPLSPM--NHYFEVEIVDPGERGAIAIGLVPKDYPLDRHPG 69

This family contains SPRY domain-containing protein 3 (SPRYD3). In humans, it is highly expressed in most tissues, including brain, kidney, heart, intestine, skeletal muscle, and testis. It also has cross-species conservation, suggesting that it is likely to carry out important cellular processes. Length = 171

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	102
KOG1477|consensus	469		98.8
smart00449	122	SPRY Domain in SPla and the RYanodine Receptor. Do	98.32
PF00622	124	SPRY: SPRY domain; InterPro: IPR003877 The SPRY do	97.83
KOG2626|consensus	544		97.42
KOG4030|consensus	197		97.22
PF07177	69	Neuralized: Neuralized; InterPro: IPR006573 NEUZ i	95.03
KOG4367|consensus	699		94.33
smart00588	123	NEUZ domain in neuralized proteins.	87.44

>KOG1477|consensus

Probab=98.80  E-value=4.1e-09  Score=87.29  Aligned_cols=83  Identities=22%  Similarity=0.317  Sum_probs=71.8

Q ss_pred             CceeeEEeCCeeEEEe-ccCCCCCcEEEEEeCCCcCCCCCceEEEEEEEecCCCCeEEEeccCCCCCCccCCCccCCcEE
Q psy17212          3 NCYKRELSQTSVIIGL-GHGKTHKDAASVRATHPIPPSCGLYYFEVKIVSKGRDGYMGIGLSAQDVNMNRLPGKYLSCGL   81 (102)
Q Consensus         3 ~~~~l~vs~d~l~~~~-g~g~~~~d~~~vran~Pip~~~~vyYFEV~Il~~g~~~~i~IG~~~~~~~l~R~PGw~~~s~~   81 (102)
                      .|.+..+++|..++.. .......|+++++|++|+|.++++||||+.|++.+..+.|+||+....+++++.|||..++++
T Consensus        40 ~~~~~~~~~~~gi~f~~~~~~~~~dvg~~~~~~~~~~N~~~~~Fe~~i~d~g~~~~i~i~~~~~~~~~~~~~g~~~~s~~  119 (469)
T KOG1477|consen   40 SDFFTKNGPDMGIAFYTPPALLYHDVGVVQAGEPLPANFGIYYFEFDILDYGIEGRIKIGFLIDSFSIIESEGYTMNSLG  119 (469)
T ss_pred             ceeEEEEcCCcceeeecCccccCCCcceeeCCCCCCcccccceeeeeHHHhhhhhceEEEEEecccccccccchhhhhhc
Confidence            4566677888887773 443346799999999999999999999999999999999999999999999999999999888


Q ss_pred             EEEe
Q psy17212         82 YFEV   85 (102)
Q Consensus        82 Yfe~   85 (102)
                      |+-.
T Consensus       120 y~g~  123 (469)
T KOG1477|consen  120 YHGN  123 (469)
T ss_pred             ccCC
Confidence            7543

>smart00449 SPRY Domain in SPla and the RYanodine Receptor

Probab=98.32  E-value=1.2e-06  Score=58.27  Aligned_cols=58  Identities=22%  Similarity=0.209  Sum_probs=44.6

Q ss_pred             CceEEEEEEEecCCCCeEEEeccCCCCC--CccCCCccCCcEEEEEee---ee---------ecc-CCCeeeeeec
Q psy17212         41 GLYYFEVKIVSKGRDGYMGIGLSAQDVN--MNRLPGKYLSCGLYFEVK---IV---------SKG-WDGYMGIGMS  101 (102)
Q Consensus        41 ~vyYFEV~Il~~g~~~~i~IG~~~~~~~--l~R~PGw~~~s~~Yfe~~---~~---------~~~-~~~~~G~G~~  101 (102)
                      +.|||||+|.+   ++.+.||++.+.++  ..+.+||+..||+|.-.+   ..         .-. .+..+|++|.
T Consensus         2 G~~YwEV~v~~---~~~~~vGv~~~~~~r~~~~~~G~~~~sw~~~~~~g~~~~~~~~~~~~~~~~~~gd~iGv~lD   74 (122)
T smart00449        2 GRHYFEVEIFD---GGHWRVGVATKSVPRGYFALLGEDKGSWGYDGDGGKKYHNSTGPEYGLPLQEPGDVIGCFLD   74 (122)
T ss_pred             CcEEEEEEEcC---CCeEEEEEEcCccCCCccccCCCCCCEEEEEcCCCcEEeCCCCCccCccccCCCCEEEEEEE
Confidence            67999999985   56899999999998  689999999999875543   10         002 3777888773

Domain of unknown function. Distant homologues are domains in butyrophilin/marenostrin/pyrin homologues.

>PF00622 SPRY: SPRY domain; InterPro: IPR003877 The SPRY domain is of unknown function

Probab=97.83  E-value=3e-05  Score=51.16  Aligned_cols=58  Identities=21%  Similarity=0.260  Sum_probs=43.7

Q ss_pred             CceEEEEEEEecCCCCeEEEeccCCCC---CCccCCCccCCcEEEEEee---eee---------ccC-CCeeeeeec
Q psy17212         41 GLYYFEVKIVSKGRDGYMGIGLSAQDV---NMNRLPGKYLSCGLYFEVK---IVS---------KGW-DGYMGIGMS  101 (102)
Q Consensus        41 ~vyYFEV~Il~~g~~~~i~IG~~~~~~---~l~R~PGw~~~s~~Yfe~~---~~~---------~~~-~~~~G~G~~  101 (102)
                      +.|||||+|.+...   +.||+++++.   ....+.|+++.+|+|....   ...         -.. +..+|++|.
T Consensus         2 G~~YwEV~v~~~~~---~~iGv~~~~~~~~~~~~~~g~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~dvIG~~lD   75 (124)
T PF00622_consen    2 GKHYWEVEVDSGGS---ISIGVATSSASVSGDENLSGYDPFSWGFHGDGGKKYHGGTSEETGSPFQEPGDVIGCGLD   75 (124)
T ss_dssp             SEEEEEEEETGGCT---EEEEEEETTSEESSSTS-TTSSTTEEEEETTTTTEEESTSSSECSCTSSTTTSEEEEEEE
T ss_pred             cCEEEEEEEecCcC---EEEEEeECccccCCccccCCccccceeeeccccccceeecccccccccccCCcEEEEEEe
Confidence            67999999987665   9999999999   6778999999999976543   111         123 788888773

Distant homologues are domains in butyrophilin/marenostrin/pyrin []. Ca2+-release from the sarcoplasmic or endoplasmic reticulum, the intracellular Ca2+ store, is mediated by the ryanodine receptor (RyR) and/or the inositol trisphosphate receptor (IP3R).; GO: 0005515 protein binding; PDB: 2V24_A 3EK9_A 2AFJ_A 2IWG_E 3EMW_A 2WL1_A 3TOJ_B 2VOK_A 2VOL_B 2FNJ_A ....

>KOG2626|consensus

Probab=97.42  E-value=0.00034  Score=59.13  Aligned_cols=69  Identities=22%  Similarity=0.212  Sum_probs=60.2

Q ss_pred             eeEEeCCeeEEEeccCCCCCcEEEEEeCCCcCCCCCceEEEEEEEecCCCCeEEEeccCCCCCCccCCCccCCcEE
Q psy17212          6 KRELSQTSVIIGLGHGKTHKDAASVRATHPIPPSCGLYYFEVKIVSKGRDGYMGIGLSAQDVNMNRLPGKYLSCGL   81 (102)
Q Consensus         6 ~l~vs~d~l~~~~g~g~~~~d~~~vran~Pip~~~~vyYFEV~Il~~g~~~~i~IG~~~~~~~l~R~PGw~~~s~~   81 (102)
                      .|.||+|.|+++.     +..-.-|||+|-+-...  .||||+|.+.+....+=||.+....+|....|.+.-|++
T Consensus       303 ql~Is~drlt~tg-----eKGy~MvRAshgv~~G~--WYFEI~vd~~pd~~a~RlGwsq~~g~LqApvGYdkfsY~  371 (544)
T KOG2626|consen  303 QLKISEDRLTATG-----EKGYRMVRASHGVLEGA--WYFEIKVDEMPDDAAIRLGWSQLYGNLQAPVGYDKFSYG  371 (544)
T ss_pred             cccccccceeeec-----ccceeeeeecccccccc--eeEEEEeecCCCccceeeecccccccccccccccccccc
Confidence            4788999999993     35577899999988766  999999999988889999999999999999999988755

>KOG4030|consensus

Probab=97.22  E-value=0.00073  Score=49.94  Aligned_cols=47  Identities=34%  Similarity=0.487  Sum_probs=37.3

Q ss_pred             EEeCCCcCCCCCceEEEEEEEecCCCCeEEEeccCCCCCCccCCC-ccCCcEE
Q psy17212         30 VRATHPIPPSCGLYYFEVKIVSKGRDGYMGIGLSAQDVNMNRLPG-KYLSCGL   81 (102)
Q Consensus        30 vran~Pip~~~~vyYFEV~Il~~g~~~~i~IG~~~~~~~l~R~PG-w~~~s~~   81 (102)
                      +-|--|+--+-  -||||+|..   .+..+||+++++.+|+|-|| .+..||.
T Consensus        55 ~lAtaPlvQnK--sYFevkiQ~---tG~WgiGlat~q~~l~~~p~g~d~~sw~  102 (197)
T KOG4030|consen   55 ALATAPLVQNK--SYFEVKIQQ---TGTWGIGLATKQSPLDKVPGGCDEKSWG  102 (197)
T ss_pred             eeeeeeeeccc--ceEEEEEee---cceeeeeeeeccCccccCCCCCcceeEE
Confidence            34555665555  899999974   56899999999999999997 7777765

>PF07177 Neuralized: Neuralized; InterPro: IPR006573 NEUZ is a domain of unknown function found in neuralized proteins, i

Probab=95.03  E-value=0.12  Score=32.49  Aligned_cols=57  Identities=21%  Similarity=0.253  Sum_probs=32.9

Q ss_pred             ceeeEEeCCeeEEEeccCCCCCcEEEEEeCCCcCCCCCceEEEEEEEe--cCCCCeEEEeccCCC
Q psy17212          4 CYKRELSQTSVIIGLGHGKTHKDAASVRATHPIPPSCGLYYFEVKIVS--KGRDGYMGIGLSAQD   66 (102)
Q Consensus         4 ~~~l~vs~d~l~~~~g~g~~~~d~~~vran~Pip~~~~vyYFEV~Il~--~g~~~~i~IG~~~~~   66 (102)
                      ..++.|++|..++..  . ..-.-+.|.+++||....   -|||+|.+  ..-.|.+.|||++.+
T Consensus        10 G~nV~L~~~~~~A~R--~-~sf~~giVFS~rPl~~~E---~~~v~I~~~~~~wsG~L~~GvT~~~   68 (69)
T PF07177_consen   10 GKNVRLSNDGTVARR--V-SSFNNGIVFSSRPLRIGE---KFEVRIDEVEPSWSGSLRIGVTSCD   68 (69)
T ss_dssp             -TTEEE-SSS-EEEE--S-T-SSS-EEEESS-B-TT----EEEEEEEEE-SSSSS--EEEEESS-
T ss_pred             CCCEEEcCCCeEEEe--c-ccCCceEEEecCCccCCC---EEEEEEEecCCCceeEEEEeeEccC
Confidence            457899999999985  1 223347999999998865   45555554  445678999998753

e. proteins involved in the specification of the neuroblast during cellular differentiation. ; PDB: 2YUE_A 2E63_A.

>KOG4367|consensus

Probab=94.33  E-value=0.18  Score=42.88  Aligned_cols=88  Identities=22%  Similarity=0.250  Sum_probs=54.9

Q ss_pred             eEEeCCeeEEEeccCCCCCcEEEEEeCCCcCCCCCceEEEEEEEecCCCCeEEEeccCCCCCCccCCCccCCc-------
Q psy17212          7 RELSQTSVIIGLGHGKTHKDAASVRATHPIPPSCGLYYFEVKIVSKGRDGYMGIGLSAQDVNMNRLPGKYLSC-------   79 (102)
Q Consensus         7 l~vs~d~l~~~~g~g~~~~d~~~vran~Pip~~~~vyYFEV~Il~~g~~~~i~IG~~~~~~~l~R~PGw~~~s-------   79 (102)
                      +.+|++-+++.   |.+ -|-.+|-.  .|.-.-+|+||||+|-.-..+.-|.||++.-...-+-+-|-+-+-       
T Consensus       546 milsnecatls---gss-leyrtilg--siafskgvhywevtidrhdgnsdivigvaqpavnrnvmlgkdlhgwsmyvdg  619 (699)
T KOG4367|consen  546 MILSNECATLS---GSS-LEYRTILG--SIAFSKGVHYWEVTIDRHDGNSDIVIGVAQPAVNRNVMLGKDLHGWSMYVDG  619 (699)
T ss_pred             eeeecccceec---ccc-cchheeee--ecccccceeEEEEEEeccCCCCCceEEecchhhhhceeecccccceeEEEcC
Confidence            45666666666   433 33333332  233344789999999888888889999988776666665554443       


Q ss_pred             ---EEEEEeee-----eeccCCCeeeeee
Q psy17212         80 ---GLYFEVKI-----VSKGWDGYMGIGM  100 (102)
Q Consensus        80 ---~~Yfe~~~-----~~~~~~~~~G~G~  100 (102)
                         |..|+.++     .|-.+|-.+|+=|
T Consensus       620 erswylhnethhnrvlggvtrgtvigvrl  648 (699)
T KOG4367|consen  620 ERSWYLHNETHHNRVLGGVTRGTVIGVRL  648 (699)
T ss_pred             cceeEEeccccccccccccccccEEEEEE
Confidence               33333333     2336777777754

>smart00588 NEUZ domain in neuralized proteins

Probab=87.44  E-value=4.7  Score=27.80  Aligned_cols=57  Identities=23%  Similarity=0.246  Sum_probs=40.2

Q ss_pred             ceeeEEeCCeeEEEeccCCCCCcEEEEEeCCCcCCCCCceEEEEEEE--ecCCCCeEEEeccCC
Q psy17212          4 CYKRELSQTSVIIGLGHGKTHKDAASVRATHPIPPSCGLYYFEVKIV--SKGRDGYMGIGLSAQ   65 (102)
Q Consensus         4 ~~~l~vs~d~l~~~~g~g~~~~d~~~vran~Pip~~~~vyYFEV~Il--~~g~~~~i~IG~~~~   65 (102)
                      .+++.|++|+.++..-  .++-.-+.|.+++||-... .  |+|+|.  ...-.+.+.+||++.
T Consensus        10 G~ni~l~~~~~~A~R~--~~~f~~givFS~rPl~~~E-~--~~v~i~~~~~~w~G~l~~G~Ts~   68 (123)
T smart00588       10 GSNIRLSDSGRVARRS--ASDFCNALVFSARPLRINE-L--FEVKIEKVVRKWSGALRFGVTTC   68 (123)
T ss_pred             CCCeEECCCCcEEEcc--cCCcCceEEecCCCCcCCC-E--EEEEEEEecCCccCceEEEEecC
Confidence            4678999999999842  1212347999999998765 3  355554  455567899999875

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	102
3toj_A	213	SET1/ASH2 histone methyltransferase complex subun;	2e-12
2yyo_A	171	SPRY domain-containing protein 3; NPPSFA, national	3e-11
2jk9_A	212	SPRY domain-containing SOCS box protein 1; transcr	4e-07
3emw_A	217	SPRY domain-containing SOCS box protein 2; apoptos	3e-06
2afj_A	226	Gene rich cluster, C9 gene; beta sandwich, gene re	5e-05

>3toj_A SET1/ASH2 histone methyltransferase complex subun; transcription, SPRY domain, prote binding, histone methylation, RBBP5, DPY-30, nuclear; 2.07A {Homo sapiens} Length = 213

 Score = 59.9 bits (145), Expect = 2e-12
 Identities = 14/54 (25%), Positives = 22/54 (40%), Gaps = 2/54 (3%)

Query: 22 KTHKDAASVRATHPIPPSCGLYYFEVKIVSKGRDGYMGIGLSAQDVNMNRLPGK 75
             K  + VRA+H +    G +YFE+ +     D    +G S    N+    G 
Sbjct: 34 VGEKGYSMVRASHGV--RKGAWYFEITVDEMPPDTAARLGWSQPLGNLQAPLGY 85

>2yyo_A SPRY domain-containing protein 3; NPPSFA, national project on protein structural and functional analyses; 2.00A {Homo sapiens} Length = 171

 Score = 55.7 bits (134), Expect = 3e-11
 Identities = 15/51 (29%), Positives = 23/51 (45%), Gaps = 2/51 (3%)

Query: 24 HKDAASVRATHPIPPSCGLYYFEVKIVSKGRDGYMGIGLSAQDVNMNRLPG 74
            +     A+ P+       YFEV IV  G  G + +GL  Q  +++  PG
Sbjct: 24 SGEVGCYVASRPLT--KDSNYFEVSIVDSGVRGTIAVGLVPQYYSLDHQPG 72

>2jk9_A SPRY domain-containing SOCS box protein 1; transcription regulation, transcription; 1.79A {Homo sapiens} PDB: 3f2o_A 2fnj_A 2v24_A 2ihs_A Length = 212

 Score = 45.0 bits (106), Expect = 4e-07
 Identities = 6/52 (11%), Positives = 21/52 (40%), Gaps = 2/52 (3%)

Query: 20  HGKTHKDAASVRATHPIPPSCGLYYFEVKIVSKGRDGYMGIGLSAQDVNMNR 71
                +   ++R       + GL+ +++    + R  +  +G++  D  ++ 
Sbjct: 56  RHPVAQSTDAIRGKVGY--TRGLHVWQITWAMRQRGTHAVVGVATADAPLHS 105

>3emw_A SPRY domain-containing SOCS box protein 2; apoptosis nucleus, apoptosis, UBL conjugation pathwayc, CL transcription regulation, transcription, phosphoprotein; 1.80A {Homo sapiens} PDB: 3ek9_A Length = 217

 Score = 42.8 bits (100), Expect = 3e-06
 Identities = 6/47 (12%), Positives = 16/47 (34%), Gaps = 2/47 (4%)

Query: 25  KDAASVRATHPIPPSCGLYYFEVKIVSKGRDGYMGIGLSAQDVNMNR 71
           +     R         GL+ +E+    + R  +  +G++     +  
Sbjct: 71  QSTDGARGKRGYS--RGLHAWEISWPLEQRGTHAVVGVATALAPLQT 115

>2afj_A Gene rich cluster, C9 gene; beta sandwich, gene regulation; NMR {Mus musculus} SCOP: b.29.1.22 Length = 226

 Score = 39.4 bits (91), Expect = 5e-05
 Identities = 7/52 (13%), Positives = 17/52 (32%), Gaps = 2/52 (3%)

Query: 20  HGKTHKDAASVRATHPIPPSCGLYYFEVKIVSKGRDGYMGIGLSAQDVNMNR 71
                +    VR         GL+ +E+    + R  +  +G++     +  
Sbjct: 63  RRPVAQSTDGVRGKRGYSR--GLHAWEISWPLEQRGTHAVVGVATALAPLQA 112

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	102
2yyo_A	171	SPRY domain-containing protein 3; NPPSFA, national	99.75
3toj_A	213	SET1/ASH2 histone methyltransferase complex subun;	99.58
3emw_A	217	SPRY domain-containing SOCS box protein 2; apoptos	98.64
2jk9_A	212	SPRY domain-containing SOCS box protein 1; transcr	98.6
2afj_A	226	Gene rich cluster, C9 gene; beta sandwich, gene re	98.57
2fbe_A	201	Predicted: similar to RET finger protein-like 1; d	95.64
3kb5_A	193	Tripartite motif-containing protein 72; B30.2, gus	95.48
2vok_A	188	52 kDa RO protein; polymorphism, immune system, me	95.47
2wl1_A	191	Pyrin, marenostrin; amyloidosis, polymorphism, cyt	95.4
3uv9_A	186	TRIM5alpha, tripartite motif-containing protein 5;	92.49
4b3n_A	602	Maltose-binding periplasmic protein, tripartite mo	90.51
2e63_A	170	KIAA1787 protein; structure genomics, neuralized d	87.15
2yue_A	168	Protein neuralized; structure genomics, NEUZ(NHR)	84.7
2yyo_A	171	SPRY domain-containing protein 3; NPPSFA, national	82.66

>2yyo_A SPRY domain-containing protein 3; NPPSFA, national project on protein structural and functional analyses; 2.00A {Homo sapiens}

Probab=99.75  E-value=2.8e-18  Score=122.89  Aligned_cols=92  Identities=21%  Similarity=0.341  Sum_probs=76.3

Q ss_pred             ceeeEEeCCeeEEEeccCCCCCcEEEEEeCCCcCCCCCceEEEEEEEecCCCCeEEEeccCCCCCCccCCCccCCcEEEE
Q psy17212          4 CYKRELSQTSVIIGLGHGKTHKDAASVRATHPIPPSCGLYYFEVKIVSKGRDGYMGIGLSAQDVNMNRLPGKYLSCGLYF   83 (102)
Q Consensus         4 ~~~l~vs~d~l~~~~g~g~~~~d~~~vran~Pip~~~~vyYFEV~Il~~g~~~~i~IG~~~~~~~l~R~PGw~~~s~~Yf   83 (102)
                      +..|.|++|+|+++   ++. .++++|||++|++.  ++|||||+|++.++++.++||+++++++++|+|||+..|++|+
T Consensus         8 ~~~l~~~~d~l~~~---~~~-~~~~~vra~~p~~~--g~~YfEv~i~~~~~~~~~~IG~a~~~~~~~~~~G~d~~S~gy~   81 (171)
T 2yyo_A            8 FKHILVDGDTLSYH---GNS-GEVGCYVASRPLTK--DSNYFEVSIVDSGVRGTIAVGLVPQYYSLDHQPGWLPDSVAYH   81 (171)
T ss_dssp             EESEEEETTEEEEC---CCS-SCCEEEECSSCCCS--SSCEEEEEEEEETTTCCCEEEEECTTCCTTSCTTSSTTCEEEE
T ss_pred             cceEEEcCCEEEEe---CCC-CceeEEEECCCCCC--CCEEEEEEEEECCCCcEEEEEecCCCCCCccCCCccCCEEEEE
Confidence            45789999999987   432 58999999999986  5699999999999999999999999999999999999999998


Q ss_pred             Eee---ee----ec------cCCCeeeeeec
Q psy17212         84 EVK---IV----SK------GWDGYMGIGMS  101 (102)
Q Consensus        84 e~~---~~----~~------~~~~~~G~G~~  101 (102)
                      -.+   ++    ++      ..+..+|+||.
T Consensus        82 ~~dG~~~~~~~~~~~yg~~f~~GDvIGc~id  112 (171)
T 2yyo_A           82 ADDGKLYNGRAKGRQFGSKCNSGDRIGCGIE  112 (171)
T ss_dssp             TTTCCEESSSSCCBCCSCCCCTTCEEEEEEC
T ss_pred             cCCCeEEeCCCCCCcCCCCCCCCCEEEEEEE
Confidence            532   12    22      34567788773

>3toj_A SET1/ASH2 histone methyltransferase complex subun; transcription, SPRY domain, prote binding, histone methylation, RBBP5, DPY-30, nuclear; 2.07A {Homo sapiens}

Probab=99.58  E-value=7.5e-15  Score=108.08  Aligned_cols=90  Identities=21%  Similarity=0.225  Sum_probs=74.0

Q ss_pred             eeeEEeCCeeEEEeccCCCCCcEEEEEeCCCcCCCCCceEEEEEEEecCCCCeEEEeccCCCCCCccCCCccCCcEEEEE
Q psy17212          5 YKRELSQTSVIIGLGHGKTHKDAASVRATHPIPPSCGLYYFEVKIVSKGRDGYMGIGLSAQDVNMNRLPGKYLSCGLYFE   84 (102)
Q Consensus         5 ~~l~vs~d~l~~~~g~g~~~~d~~~vran~Pip~~~~vyYFEV~Il~~g~~~~i~IG~~~~~~~l~R~PGw~~~s~~Yfe   84 (102)
                      +.|.||+|+|+|+.     ..+.++|||+++++.  +.|||||+|.+.++++.+.||++++.++++++|||+..||+|+-
T Consensus        22 ~~l~ls~d~l~v~~-----~~~~~~vra~~~v~~--G~~YfEV~v~~~~~~~~~~iG~a~~~~~~~~~~G~d~~S~gy~~   94 (213)
T 3toj_A           22 PQLKISDDRLTVVG-----EKGYSMVRASHGVRK--GAWYFEITVDEMPPDTAARLGWSQPLGNLQAPLGYDKFSYSWRS   94 (213)
T ss_dssp             TTSEECTTSSEEEC-----CSSCEEEEESCCBSS--EEEEEEEEEEECCTTCEEEEEEECTTSCTTSCTTSSTTEEEEET
T ss_pred             CCEEEcCCCcEEEe-----CCceeEEEeCCCccC--CeEEEEEEEeecCCCceEEEEeccCCcccccCCCCCCCcEEEEC
Confidence            56899999999983     366899999999984  77999999999888899999999999999999999999999862


Q ss_pred             ee---ee---ec------cCCCeeeeeec
Q psy17212         85 VK---IV---SK------GWDGYMGIGMS  101 (102)
Q Consensus        85 ~~---~~---~~------~~~~~~G~G~~  101 (102)
                      .+   ++   ++      ..+..+|++|.
T Consensus        95 ~~G~~~h~~~~~~yg~~~~~GDvIGc~ld  123 (213)
T 3toj_A           95 KKGTKFHQSIGKHYSSGYGQGDVLGFYIN  123 (213)
T ss_dssp             TTTCEEETTEEECCSCCCCTTCEEEEEEE
T ss_pred             CCCeEEeCCcCcccCCCCCCCCEEEEEEE
Confidence            21   11   22      34567788763

>3emw_A SPRY domain-containing SOCS box protein 2; apoptosis nucleus, apoptosis, UBL conjugation pathwayc, CL transcription regulation, transcription, phosphoprotein; 1.80A {Homo sapiens} PDB: 3ek9_A

Probab=98.64  E-value=4.3e-08  Score=72.15  Aligned_cols=75  Identities=12%  Similarity=0.057  Sum_probs=59.6

Q ss_pred             eeeEEeCCeeEEEeccCCCCCcEEEEEeCCCcCCCCCceEEEEEEEecCCCCeEEEeccCCCCC-----CccCCCccCCc
Q psy17212          5 YKRELSQTSVIIGLGHGKTHKDAASVRATHPIPPSCGLYYFEVKIVSKGRDGYMGIGLSAQDVN-----MNRLPGKYLSC   79 (102)
Q Consensus         5 ~~l~vs~d~l~~~~g~g~~~~d~~~vran~Pip~~~~vyYFEV~Il~~g~~~~i~IG~~~~~~~-----l~R~PGw~~~s   79 (102)
                      +.|.||+|.++|..++-.  ....+|+++.++.  ++.+||||+|.++.+...+.||++.+..+     ..++.||+..|
T Consensus        53 ~~L~lSed~~~v~~~~~~--~~~~~Vl~~~~~~--sGrhYWEV~v~~~~~g~~~~vGv~~~~~~r~~~g~~~~lG~~~~S  128 (217)
T 3emw_A           53 ENIEVKEGGLYFERRPVA--QSTDGARGKRGYS--RGLHAWEISWPLEQRGTHAVVGVATALAPLQTDHYAALLGSNSES  128 (217)
T ss_dssp             TTEEEEGGGTEEEECCBS--SCEEEEEESCCBS--SSEEEEEEECCGGGCTTCCEEEEECTTSCCEESSSCCCTTSSTTE
T ss_pred             CCEEECCCCeEEEECccC--CCCCEEEeCCCcc--CccEEEEEEEcccCCCCceeEEEEcCccccccCCccccccCCCCE
Confidence            468999999999854322  2356999999986  56699999998764445789999999988     46789999999


Q ss_pred             EEEE
Q psy17212         80 GLYF   83 (102)
Q Consensus        80 ~~Yf   83 (102)
                      |+|.
T Consensus       129 W~l~  132 (217)
T 3emw_A          129 WGWD  132 (217)
T ss_dssp             EEEE
T ss_pred             EEEE
Confidence            9965

>2jk9_A SPRY domain-containing SOCS box protein 1; transcription regulation, transcription; 1.79A {Homo sapiens} PDB: 3f2o_A 2fnj_A 2v24_A 2ihs_A

Probab=98.60  E-value=1.7e-07  Score=68.00  Aligned_cols=75  Identities=12%  Similarity=0.138  Sum_probs=57.9

Q ss_pred             eeeEEeCCe-eEEEeccCCCCCcEEEEEeCCCcCCCCCceEEEEEEEecCCCCeEEEeccCCCCCC-----ccCCCccCC
Q psy17212          5 YKRELSQTS-VIIGLGHGKTHKDAASVRATHPIPPSCGLYYFEVKIVSKGRDGYMGIGLSAQDVNM-----NRLPGKYLS   78 (102)
Q Consensus         5 ~~l~vs~d~-l~~~~g~g~~~~d~~~vran~Pip~~~~vyYFEV~Il~~g~~~~i~IG~~~~~~~l-----~R~PGw~~~   78 (102)
                      .+|.||+|. +++...+.  .....+|+++.++.  ++.|||||+|.+......+.||+|.+..++     ..+.|++..
T Consensus        42 ~~L~lsed~~~~~~~~~~--~~~~~~Vlg~~~f~--sGrhYWEV~v~~~~~~~~w~vGV~~~~~~r~~~g~~~~~G~~~~  117 (212)
T 2jk9_A           42 LNVFVKEDDKLIFHRHPV--AQSTDAIRGKVGYT--RGLHVWQITWAMRQRGTHAVVGVATADAPLHSVGYTTLVGNNHE  117 (212)
T ss_dssp             TTEEEETTEEEEEEECCB--TTEEEEEEESCCBC--SSEEEEEEECCGGGCTTCCEEEEECTTSCCEEESSCCCTTSSTT
T ss_pred             CceEEeCCCeEEEEECCC--CCccceEEcCCCcc--CCeEEEEEEEecccCCCcEEEEEEcCCccccccCcccccccCCC
Confidence            478999986 57764322  23578999999885  567999999976545567789999999886     356799999


Q ss_pred             cEEEE
Q psy17212         79 CGLYF   83 (102)
Q Consensus        79 s~~Yf   83 (102)
                      ||+|.
T Consensus       118 sw~~~  122 (212)
T 2jk9_A          118 SWGWD  122 (212)
T ss_dssp             EEEEE
T ss_pred             cEeeE
Confidence            99864

>2afj_A Gene rich cluster, C9 gene; beta sandwich, gene regulation; NMR {Mus musculus} SCOP: b.29.1.22

Probab=98.57  E-value=7.8e-08  Score=70.71  Aligned_cols=76  Identities=13%  Similarity=0.075  Sum_probs=58.6

Q ss_pred             ceeeEEeCCeeEEEeccCCCCCcEEEEEeCCCcCCCCCceEEEEEEEecCCCCeEEEeccCCCCC-----CccCCCccCC
Q psy17212          4 CYKRELSQTSVIIGLGHGKTHKDAASVRATHPIPPSCGLYYFEVKIVSKGRDGYMGIGLSAQDVN-----MNRLPGKYLS   78 (102)
Q Consensus         4 ~~~l~vs~d~l~~~~g~g~~~~d~~~vran~Pip~~~~vyYFEV~Il~~g~~~~i~IG~~~~~~~-----l~R~PGw~~~   78 (102)
                      ...|.||+|.+++...+.....|  +|+++.++.  ++.|||||+|.+..+...+.||+|.+..+     ...+.|++..
T Consensus        49 ~~~L~lSed~~~v~~~~~~~~~~--~Vlg~~~f~--sGrhYWEV~V~~~~~~~~w~vGV~~~s~~~~r~~~~~~~G~~~~  124 (226)
T 2afj_A           49 SENIDVKEGGLCFERRPVAQSTD--GVRGKRGYS--RGLHAWEISWPLEQRGTHAVVGVATALAPLQADHYAALLGSNSE  124 (226)
T ss_dssp             CCSSEEETTTTEEECSSCTTTSS--SEEECCCCC--CSEEEEEEECCCCSSSCCCEEEEEESSCCCSSCSSSCCCCCSCE
T ss_pred             CCCEEEeCCCEEEEECCCCCCcC--eEEECCCcc--CCEEEEEEEEeccCCCCCEEEEecCCccccccccccccccCCCC
Confidence            35799999999998533222233  899999887  46799999997655566789999999885     3456899999


Q ss_pred             cEEEE
Q psy17212         79 CGLYF   83 (102)
Q Consensus        79 s~~Yf   83 (102)
                      +|+|.
T Consensus       125 sw~~~  129 (226)
T 2afj_A          125 SWGWD  129 (226)
T ss_dssp             EEEEE
T ss_pred             cEEEE
Confidence            99976

>2fbe_A Predicted: similar to RET finger protein-like 1; dimer, jellyroll beta-sandwich fold, unknown function; 2.52A {Homo sapiens} SCOP: b.29.1.22

Probab=95.64  E-value=0.022  Score=41.26  Aligned_cols=60  Identities=20%  Similarity=0.199  Sum_probs=41.4

Q ss_pred             eeeEEeCCeeEEEeccCCC--------CCcEEEEEeCCCcCCCCCceEEEEEEEecCCCCeEEEeccCCCCCC
Q psy17212          5 YKRELSQTSVIIGLGHGKT--------HKDAASVRATHPIPPSCGLYYFEVKIVSKGRDGYMGIGLSAQDVNM   69 (102)
Q Consensus         5 ~~l~vs~d~l~~~~g~g~~--------~~d~~~vran~Pip~~~~vyYFEV~Il~~g~~~~i~IG~~~~~~~l   69 (102)
                      .+|.||+|..+|+.+....        -....+|.....+..  +.+||||++-   ......||+|.+..+-
T Consensus        21 ~~L~lSed~~~v~~~~~~q~~p~~peRF~~~~~VLg~~~fsS--GrHYWEVev~---~~~~w~vGV~~~si~R   88 (201)
T 2fbe_A           21 NYLIISEDLRSFRSGDLSQNRKEQAERFDTALCVLGTPRFTS--GRHYWEVDVG---TSQVWDVGVCKESVNR   88 (201)
T ss_dssp             TTEEECTTSSEEEECSSCCCCCCCTTSCSSSCEEEESCCBSS--SEEEEEEECT---TCSEEEEEEEETTSCC
T ss_pred             CceEECCCCcEEEECCccCCCCCCccceeeccceecCccccC--CceEEEEEeC---CCCEEEEEEeeCccCC
Confidence            4799999999998543221        112456777777654  5599999984   3456899999876543

>3kb5_A Tripartite motif-containing protein 72; B30.2, gustavus, SPRY, TRIM21, TRIM72, PRY, high resolution, Mg53; 1.50A {Homo sapiens}

Probab=95.48  E-value=0.022  Score=40.77  Aligned_cols=60  Identities=18%  Similarity=0.216  Sum_probs=40.9

Q ss_pred             eeeEEeCCeeEEEeccCC-C--------CCcEEEEEeCCCcCCCCCceEEEEEEEecCCCCeEEEeccCCCCCC
Q psy17212          5 YKRELSQTSVIIGLGHGK-T--------HKDAASVRATHPIPPSCGLYYFEVKIVSKGRDGYMGIGLSAQDVNM   69 (102)
Q Consensus         5 ~~l~vs~d~l~~~~g~g~-~--------~~d~~~vran~Pip~~~~vyYFEV~Il~~g~~~~i~IG~~~~~~~l   69 (102)
                      ++|.||+|..+|..+... .        -....+|.+...+..  +.+||||++-   ......||+|.+..+-
T Consensus        23 ~~L~lSed~~~v~~~~~~~q~~p~~p~RF~~~~~VLg~~~fss--GrhYWEVev~---~~~~W~lGV~~~s~~R   91 (193)
T 3kb5_A           23 PSLVVSSSGRRVECSEQKAPPAGEDPRQFDKAVAVVAHQQLSE--GEHYWEVDVG---DKPRWALGVIAAEAPR   91 (193)
T ss_dssp             TTEEEETTTTEEEECCSCCCCCCSCTTSCSSSCEEEBSCCBCS--SEEEEEEECT---TCSSEEEEEEETTSCC
T ss_pred             CCEEECCCCCEEEECCcCCCCCCCCccccccccEEccCCcccC--CCEEEEEEeC---cCceEEEEEeeCCcCc
Confidence            578999999998854332 1        112456777776654  4599999984   3446789998876643

>2vok_A 52 kDa RO protein; polymorphism, immune system, metal-binding, tripartite motif (TRIM) protein, SPRY systemic lupus erythematosus, zinc, B30.2; 1.30A {Mus musculus} PDB: 2vol_B* 2iwg_B*

Probab=95.47  E-value=0.024  Score=40.62  Aligned_cols=60  Identities=15%  Similarity=0.256  Sum_probs=41.2

Q ss_pred             eeeEEeCCeeEEEeccCCC--------CCcEEEEEeCCCcCCCCCceEEEEEEEecCCCCeEEEeccCCCCCC
Q psy17212          5 YKRELSQTSVIIGLGHGKT--------HKDAASVRATHPIPPSCGLYYFEVKIVSKGRDGYMGIGLSAQDVNM   69 (102)
Q Consensus         5 ~~l~vs~d~l~~~~g~g~~--------~~d~~~vran~Pip~~~~vyYFEV~Il~~g~~~~i~IG~~~~~~~l   69 (102)
                      ++|.||+|..+|+.+....        -....+|.....+..  +.+||||++-   ......||+|.+..+-
T Consensus        20 ~~L~lSed~~~v~~~~~~q~~p~~peRF~~~~~VLg~~~fsS--GrHYWEVev~---~~~~w~vGV~~~si~R   87 (188)
T 2vok_A           20 SWLIISKDRRQVRMGDTHQNVSDNKERFSNYPMVLGAQRFSS--GKMYWEVDVT---QKEAWDLGVCRDSVQR   87 (188)
T ss_dssp             TTEEECTTSCEEEECSSCCCCCCCTTSCCSSSEEEBSCCBSS--SEEEEEEECT---TCSCEEEEEEETTCCC
T ss_pred             CCeEECCCCCEEEECCccCCCCCCccceeeeccccccCcccC--CCeEEEEEec---CCceEEEEEeeCCcCC
Confidence            5799999999998543211        112456777777654  5599999984   3446889999876543

>2wl1_A Pyrin, marenostrin; amyloidosis, polymorphism, cytoskeleton, actin-binding inflammatory response, metal-binding, signaling protein; 1.35A {Homo sapiens}

Probab=95.40  E-value=0.019  Score=41.12  Aligned_cols=60  Identities=15%  Similarity=0.150  Sum_probs=39.9

Q ss_pred             eeeEEeCCeeEEEeccCCCC--------CcEEEEEeCCCcCCCCCceEEEEEEEecCCCCeEEEeccCCCCCC
Q psy17212          5 YKRELSQTSVIIGLGHGKTH--------KDAASVRATHPIPPSCGLYYFEVKIVSKGRDGYMGIGLSAQDVNM   69 (102)
Q Consensus         5 ~~l~vs~d~l~~~~g~g~~~--------~d~~~vran~Pip~~~~vyYFEV~Il~~g~~~~i~IG~~~~~~~l   69 (102)
                      .+|.||+|..+|..+.....        ....+|.....+..  +.+||||++-   ......||+|.+..+-
T Consensus        24 ~~L~lSed~~~v~~~~~~q~~p~~p~RF~~~~~VLg~~~fss--GrHYWEVev~---~~~~w~vGV~~~s~~R   91 (191)
T 2wl1_A           24 PNLIFSDDLKSVRLGNKWERLPDGPQRFDSCIIVLGSPSFLS--GRRYWEVEVG---DKTAWILGACKTSISR   91 (191)
T ss_dssp             TTEEECTTSCEEEECCTTCCCCCCTTSCSSSCCEEEECCBCS--SEEEEEEECT---TCSCEEEEEEETTCCS
T ss_pred             CceEECCCCcEEEECCcCCCCCCCcccccccccccCcccccC--CCEEEEEEeC---CCCEEEEEEeeCCcCC
Confidence            47899999999985432111        12345666666554  5699999984   3456889999876543

>3uv9_A TRIM5alpha, tripartite motif-containing protein 5; domain SWAP, antiretroviral, HIV capsid, ligase; 1.55A {Macaca mulatta}

Probab=92.49  E-value=0.23  Score=35.26  Aligned_cols=52  Identities=15%  Similarity=0.240  Sum_probs=35.9

Q ss_pred             eeEEeCCeeEEEeccCCCCCcEEEEEeCCCcCCCCCceEEEEEEEecCCCCeEEEeccCCCCC
Q psy17212          6 KRELSQTSVIIGLGHGKTHKDAASVRATHPIPPSCGLYYFEVKIVSKGRDGYMGIGLSAQDVN   68 (102)
Q Consensus         6 ~l~vs~d~l~~~~g~g~~~~d~~~vran~Pip~~~~vyYFEV~Il~~g~~~~i~IG~~~~~~~   68 (102)
                      .|.||+|+..|.+..      ..+|-....+..  +.+||||++-   .+....||+|.+..+
T Consensus        23 ~l~lSed~r~Vr~~~------~~~VLG~~~fts--GrHYWEVeV~---~~~~W~vGV~~~~~~   74 (186)
T 3uv9_A           23 HAVIAEDKRQVSSRA------GTGVLGSQSITS--GKHYWEVDVS---KKSAWILGVCAGFQS   74 (186)
T ss_dssp             CCEECTTSSCEECCC------SSCEECSSCBCS--SEEEEEEECT---TCSCEEEEEESCSTT
T ss_pred             CceECCCCCEEeecC------CCcCcCCCCCCC--CCEEEEEEEc---CCCcEEEEEEEEEec
Confidence            488999998887422      234666666655  4599999983   445678999876543

>4b3n_A Maltose-binding periplasmic protein, tripartite motif-containing protein 5; sugar binding protein-ligase complex; HET: MAL MES; 3.30A {Escherichia coli} PDB: 2lm3_A

Probab=90.51  E-value=0.33  Score=39.33  Aligned_cols=55  Identities=15%  Similarity=0.254  Sum_probs=34.8

Q ss_pred             eeEEeCCeeEEEeccCCCC----------------CcEEEEEeCCCcCCCCCceEEEEEEEecCCCCeEEEeccCC
Q psy17212          6 KRELSQTSVIIGLGHGKTH----------------KDAASVRATHPIPPSCGLYYFEVKIVSKGRDGYMGIGLSAQ   65 (102)
Q Consensus         6 ~l~vs~d~l~~~~g~g~~~----------------~d~~~vran~Pip~~~~vyYFEV~Il~~g~~~~i~IG~~~~   65 (102)
                      +|.||.|+..|+.+..+..                ....+|-....+..  +.+||||++   +.+....||+|..
T Consensus       421 ~l~~s~d~r~v~~~~~~~~~~~p~~~~~~~~~~rF~~~~~VLg~~~f~s--GrhyWEV~v---~~~~~w~~Gv~~~  491 (602)
T 4b3n_A          421 HAVIAEDKRQVSSRNPQIMYQAPGTLFTFPSLTNFNYCTGVLGSQSITS--GKHYWEVDV---SKKSAWILGVCAG  491 (602)
T ss_dssp             SCEECTTSSEEECCCC--------------------CCCCEEESSCBSS--SEEEEEEEC---TTCSCEEEEEECC
T ss_pred             ceeEecCCCEEEECCccccccCCCccCCCCCcccCCCCCEeccCCCCCC--EEEEEEEEE---CCCeeEEEEEeec
Confidence            4889999999986543211                11234555555444  559999998   4455678888864

>2e63_A KIAA1787 protein; structure genomics, neuralized domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=87.15  E-value=1.3  Score=31.21  Aligned_cols=60  Identities=22%  Similarity=0.205  Sum_probs=42.8

Q ss_pred             ceeeEEeCCeeEEEeccCCCCCcEEEEEeCCCcCCCCCceEEEEEEEec--CCCCeEEEeccCCC
Q psy17212          4 CYKRELSQTSVIIGLGHGKTHKDAASVRATHPIPPSCGLYYFEVKIVSK--GRDGYMGIGLSAQD   66 (102)
Q Consensus         4 ~~~l~vs~d~l~~~~g~g~~~~d~~~vran~Pip~~~~vyYFEV~Il~~--g~~~~i~IG~~~~~   66 (102)
                      .+.+.|++|+.++....-..+-.-+.|.+++|+.+..   -|+|+|.+.  +-.+.+.+||++.+
T Consensus        14 G~nI~L~~~~~~A~R~~~~~~f~~givFS~rPl~~~E---~~~v~I~~~~~~wsG~l~~GvT~~d   75 (170)
T 2e63_A           14 GRLVSLSACGRTARRQQPGQEFNHGLVLSREPLRDGR---VFTVRIDRKVNSWSGSIEIGVTALD   75 (170)
T ss_dssp             CSSEEECSSSCEEEESCTTTCSCSCCEEEEEEECTTC---EEEEEEEEECCSSCCCCEEEEESSC
T ss_pred             CCCeEECCCCeEEEeCCCCcccCceEEEECCCCCCCC---EEEEEEEeecCCcceeEEEEEEccC
Confidence            4678999999999843211223457889999998876   367777644  44678999998763

>2yue_A Protein neuralized; structure genomics, NEUZ(NHR) domain, structural genomics, NPPSFA; NMR {Drosophila melanogaster}

Probab=84.70  E-value=2.1  Score=30.13  Aligned_cols=56  Identities=13%  Similarity=0.073  Sum_probs=41.4

Q ss_pred             ceeeEEeCCeeEEEeccCCCCCcEEEEEeCCCcCCCCCceEEEEEEEec--CCCCeEEEeccCC
Q psy17212          4 CYKRELSQTSVIIGLGHGKTHKDAASVRATHPIPPSCGLYYFEVKIVSK--GRDGYMGIGLSAQ   65 (102)
Q Consensus         4 ~~~l~vs~d~l~~~~g~g~~~~d~~~vran~Pip~~~~vyYFEV~Il~~--g~~~~i~IG~~~~   65 (102)
                      .+++.|++|+.++...   .+-.-+.|.+++||....   -|+|+|.+.  .-.+.+.|||++.
T Consensus        16 G~nI~L~~~~~~A~R~---~sf~~givFS~RPl~~~E---~~~v~I~~~~~~wsG~l~~GvT~~   73 (168)
T 2yue_A           16 GDNIRISRDGTLARRF---ESFCRAITFSARPVRINE---RICVKFAEISNNWNGGIRFGFTSN   73 (168)
T ss_dssp             CTTEEECCSSCCEEEC---SCSSCCEEEESSCCCSSC---CEEEEEEECCSSSSSCCEEEEESS
T ss_pred             CCCeEECCCCcEEEec---ccCCceEEEECCCCcCCC---EEEEEEEeecCCcceeEEEeeeec
Confidence            3568899999999843   223457899999998875   367777654  4467899999775

>2yyo_A SPRY domain-containing protein 3; NPPSFA, national project on protein structural and functional analyses; 2.00A {Homo sapiens}

Probab=82.66  E-value=0.83  Score=31.70  Aligned_cols=22  Identities=41%  Similarity=0.759  Sum_probs=20.1

Q ss_pred             EEEEeeeeeccCCCeeeeeecC
Q psy17212         81 LYFEVKIVSKGWDGYMGIGMSA  102 (102)
Q Consensus        81 ~Yfe~~~~~~~~~~~~G~G~~~  102 (102)
                      .|||+++..++.++.|.||+++
T Consensus        41 ~YfEv~i~~~~~~~~~~IG~a~   62 (171)
T 2yyo_A           41 NYFEVSIVDSGVRGTIAVGLVP   62 (171)
T ss_dssp             CEEEEEEEEETTTCCCEEEEEC
T ss_pred             EEEEEEEEECCCCcEEEEEecC
Confidence            4999999999999999999974

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	102
d2fnja1	217	b.29.1.22 (A:35-251) LD34464p {Fruit fly (Drosophi	8e-06
d2afja1	213	b.29.1.22 (A:12-224) SPRY domain-containing SOCS b	2e-05

>d2fnja1 b.29.1.22 (A:35-251) LD34464p {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 217

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: SPRY domain
domain: LD34464p
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 40.1 bits (93), Expect = 8e-06
 Identities = 7/52 (13%), Positives = 21/52 (40%), Gaps = 2/52 (3%)

Query: 20 HGKTHKDAASVRATHPIPPSCGLYYFEVKIVSKGRDGYMGIGLSAQDVNMNR 71
               +    +R    +  + GL+ +E+   ++ R  +  +G+   D  ++ 
Sbjct: 47 RHPVAQSTDCIRGKVGL--TKGLHIWEIYWPTRQRGTHAVVGVCTADAPLHS 96

>d2afja1 b.29.1.22 (A:12-224) SPRY domain-containing SOCS box protein 2 {Mouse (Mus musculus) [TaxId: 10090]} Length = 213

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: SPRY domain
domain: SPRY domain-containing SOCS box protein 2
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 39.1 bits (90), Expect = 2e-05
 Identities = 8/51 (15%), Positives = 18/51 (35%), Gaps = 2/51 (3%)

Query: 20  HGKTHKDAASVRATHPIPPSCGLYYFEVKIVSKGRDGYMGIGLSAQDVNMN 70
                +    VR       S GL+ +E+    + R  +  +G++     + 
Sbjct: 57  RRPVAQSTDGVRGKRGY--SRGLHAWEISWPLEQRGTHAVVGVATALAPLQ 105

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	102
d2fnja1	217	LD34464p {Fruit fly (Drosophila melanogaster) [Tax	98.79
d2afja1	213	SPRY domain-containing SOCS box protein 2 {Mouse (	98.55
d2fbea1	188	Similar to Ret finger protein-like 1 {Human (Homo	96.92
d2iwgb1	179	52 kDa Ro protein {Human (Homo sapiens) [TaxId: 96	96.29

>d2fnja1 b.29.1.22 (A:35-251) LD34464p {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: SPRY domain
domain: LD34464p
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=98.79  E-value=8.9e-09  Score=73.44  Aligned_cols=76  Identities=13%  Similarity=0.143  Sum_probs=58.5

Q ss_pred             eeeEEeCCeeEEEeccCCCCCcEEEEEeCCCcCCCCCceEEEEEEEecCCCCeEEEeccCCCCCCc-----cCCCccCCc
Q psy17212          5 YKRELSQTSVIIGLGHGKTHKDAASVRATHPIPPSCGLYYFEVKIVSKGRDGYMGIGLSAQDVNMN-----RLPGKYLSC   79 (102)
Q Consensus         5 ~~l~vs~d~l~~~~g~g~~~~d~~~vran~Pip~~~~vyYFEV~Il~~g~~~~i~IG~~~~~~~l~-----R~PGw~~~s   79 (102)
                      ..|.||+|++.+..-...+ ...++||++.++..  +.|||||+|.+......+.||+++++++++     .++||+.++
T Consensus        33 ~~~~ls~~~~~~~~~~~~~-~~~~~vrgt~g~ss--Gk~YWEV~v~~~~~~~~~~IGV~~~~~~~~~~~~~~~~G~~~~s  109 (217)
T d2fnja1          33 LNIFVKEDDKLTFHRHPVA-QSTDCIRGKVGLTK--GLHIWEIYWPTRQRGTHAVVGVCTADAPLHSVGYQSLVGSTEQS  109 (217)
T ss_dssp             TTEEEETTEEEEEEECCCT-TEEEEEEESCCBCS--SEEEEEEECCGGGCTTCCEEEEECTTSCSEEESSCCCTTSSTTE
T ss_pred             CCEEEeCCCceEEEeCCcc-ccCCeEEEcccccC--CcEEEEEEEecCCCCCeeEEEEEecccCcccCCccccccCCCCc
Confidence            4578999887765322222 44678999988864  779999999877666678899999999985     468999999


Q ss_pred             EEEE
Q psy17212         80 GLYF   83 (102)
Q Consensus        80 ~~Yf   83 (102)
                      |+|.
T Consensus       110 ~~~~  113 (217)
T d2fnja1         110 WGWD  113 (217)
T ss_dssp             EEEE
T ss_pred             ceEe
Confidence            8864

>d2afja1 b.29.1.22 (A:12-224) SPRY domain-containing SOCS box protein 2 {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: SPRY domain
domain: SPRY domain-containing SOCS box protein 2
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.55  E-value=3.2e-08  Score=70.06  Aligned_cols=76  Identities=12%  Similarity=0.069  Sum_probs=57.9

Q ss_pred             eeeEEeCCeeEEEeccCCCCCcEEEEEeCCCcCCCCCceEEEEEEEecCCCCeEEEeccCCCCCCc-----cCCCccCCc
Q psy17212          5 YKRELSQTSVIIGLGHGKTHKDAASVRATHPIPPSCGLYYFEVKIVSKGRDGYMGIGLSAQDVNMN-----RLPGKYLSC   79 (102)
Q Consensus         5 ~~l~vs~d~l~~~~g~g~~~~d~~~vran~Pip~~~~vyYFEV~Il~~g~~~~i~IG~~~~~~~l~-----R~PGw~~~s   79 (102)
                      ..|+||+|+|++.....  ......||++.++.  .+.|||||+|.+......+.||++.++.+++     +++|++..+
T Consensus        44 ~~i~ls~g~l~~~~~~~--~~~~~~v~gt~~~s--sGk~YwEv~i~~~~~~~~~~iGv~~~~~~~~~~~~~~~~G~~~~s  119 (213)
T d2afja1          44 ENIDVKEGGLCFERRPV--AQSTDGVRGKRGYS--RGLHAWEISWPLEQRGTHAVVGVATALAPLQADHYAALLGSNSES  119 (213)
T ss_dssp             CSSEEETTTTEEECSSC--TTTSSSEEECCCCC--CSEEEEEEECCCCSSSCCCEEEEEESSCCCSSCSSSCCCCCSCEE
T ss_pred             CCeEEeCCCeEEEeCCc--cCccccEEECcccc--CCcEEEEEEEeccCCcceEEEeEeecccCccccCcccccccccCC
Confidence            45899999999973211  12356799998874  4779999999877666778899988877765     469999999


Q ss_pred             EEEEE
Q psy17212         80 GLYFE   84 (102)
Q Consensus        80 ~~Yfe   84 (102)
                      ++|..
T Consensus       120 ~g~~~  124 (213)
T d2afja1         120 WGWDI  124 (213)
T ss_dssp             EEEEG
T ss_pred             ccccc
Confidence            98753

>d2fbea1 b.29.1.22 (A:1-188) Similar to Ret finger protein-like 1 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: SPRY domain
domain: Similar to Ret finger protein-like 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.92  E-value=0.001  Score=45.89  Aligned_cols=69  Identities=16%  Similarity=0.078  Sum_probs=47.3

Q ss_pred             ceeeEEeCCeeEEEeccCCC--------CCcEEEEEeCCCcCCCCCceEEEEEEEecCCCCeEEEeccCCCCCCccCCCc
Q psy17212          4 CYKRELSQTSVIIGLGHGKT--------HKDAASVRATHPIPPSCGLYYFEVKIVSKGRDGYMGIGLSAQDVNMNRLPGK   75 (102)
Q Consensus         4 ~~~l~vs~d~l~~~~g~g~~--------~~d~~~vran~Pip~~~~vyYFEV~Il~~g~~~~i~IG~~~~~~~l~R~PGw   75 (102)
                      .+.|.||+|..+|+.+....        -....+|.++..+....  |||||++-   ......||+|.+..+-...-+.
T Consensus        20 h~~L~lS~d~~~V~~~~~~~~~p~~p~rF~~~~~VLg~~~fssGr--HYWEV~V~---~~~~w~vGV~~~sv~Rk~~~~~   94 (188)
T d2fbea1          20 NNYLIISEDLRSFRSGDLSQNRKEQAERFDTALCVLGTPRFTSGR--HYWEVDVG---TSQVWDVGVCKESVNRQGKIEL   94 (188)
T ss_dssp             CTTEEECTTSSEEEECSSCCCCCCCTTSCSSSCEEEESCCBSSSE--EEEEEECT---TCSEEEEEEEETTSCCSSCCCC
T ss_pred             CCCEEEccCCcEEEECCcCCCCCCCcccccceeeccccccccCCC--EEEEEEee---eCCeEEEEEEeCCcCcCccccc
Confidence            35799999999998432221        12345788888887755  99999983   4557899999998765433343


Q ss_pred             cC
Q psy17212         76 YL   77 (102)
Q Consensus        76 ~~   77 (102)
                      .+
T Consensus        95 ~~   96 (188)
T d2fbea1          95 SS   96 (188)
T ss_dssp             CT
T ss_pred             CC
Confidence            33

>d2iwgb1 b.29.1.22 (B:4-182) 52 kDa Ro protein {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: SPRY domain
domain: 52 kDa Ro protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.29  E-value=0.0034  Score=42.87  Aligned_cols=63  Identities=17%  Similarity=0.198  Sum_probs=43.3

Q ss_pred             ceeeEEeCCeeEEEeccCCC--------CCcEEEEEeCCCcCCCCCceEEEEEEEecCCCCeEEEeccCCCCCCcc
Q psy17212          4 CYKRELSQTSVIIGLGHGKT--------HKDAASVRATHPIPPSCGLYYFEVKIVSKGRDGYMGIGLSAQDVNMNR   71 (102)
Q Consensus         4 ~~~l~vs~d~l~~~~g~g~~--------~~d~~~vran~Pip~~~~vyYFEV~Il~~g~~~~i~IG~~~~~~~l~R   71 (102)
                      .++|.||+|..+|+.+..+.        -....+|.++..+..  +.+||||++   +......||+|.+..+-..
T Consensus        11 h~~L~lS~d~~~V~~~~~~~~~p~~p~RF~~~~~VLg~~~f~s--G~HYWEVeV---~~~~~w~vGV~~~s~~Rk~   81 (179)
T d2iwgb1          11 NPWLILSEDRRQVRLGDTQQSIPGNEERFDSYPMVLGAQHFHS--GKHYWEVDV---TGKEAWDLGVCRDSVRRKG   81 (179)
T ss_dssp             CTTEEECTTSCEEEECSSCCCCCCCTTSCCSSSCEEBSCCBSS--SEEEEEEEC---TTCSCEEEEEEETTCCCSS
T ss_pred             CCCEEEcCCCCEEEECCcCcCCCCCcccccccccccccccccC--CCEEEEEEE---eeCCeEEEEEEcCccCcCc
Confidence            46799999999998533221        112456777776655  459999998   3455688999988776543