Psyllid ID: psy1741
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 333 | ||||||
| 383860229 | 318 | PREDICTED: etoposide-induced protein 2.4 | 0.897 | 0.940 | 0.507 | 6e-84 | |
| 332021725 | 315 | Etoposide-induced protein 2.4-like prote | 0.876 | 0.926 | 0.510 | 2e-83 | |
| 380013070 | 318 | PREDICTED: etoposide-induced protein 2.4 | 0.897 | 0.940 | 0.498 | 9e-83 | |
| 66550396 | 318 | PREDICTED: etoposide-induced protein 2.4 | 0.897 | 0.940 | 0.501 | 2e-82 | |
| 322798817 | 343 | hypothetical protein SINV_03609 [Solenop | 0.906 | 0.880 | 0.486 | 4e-82 | |
| 340718019 | 317 | PREDICTED: etoposide-induced protein 2.4 | 0.882 | 0.927 | 0.501 | 6e-82 | |
| 156547143 | 316 | PREDICTED: etoposide-induced protein 2.4 | 0.891 | 0.939 | 0.478 | 4e-81 | |
| 350417590 | 317 | PREDICTED: etoposide-induced protein 2.4 | 0.882 | 0.927 | 0.501 | 6e-81 | |
| 307170914 | 290 | Etoposide-induced protein 2.4-like prote | 0.804 | 0.924 | 0.547 | 6e-80 | |
| 307191725 | 290 | Etoposide-induced protein 2.4-like prote | 0.813 | 0.934 | 0.544 | 1e-77 |
| >gi|383860229|ref|XP_003705593.1| PREDICTED: etoposide-induced protein 2.4 homolog [Megachile rotundata] | Back alignment and taxonomy information |
|---|
Score = 317 bits (812), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 169/333 (50%), Positives = 224/333 (67%), Gaps = 34/333 (10%)
Query: 3 HALLKGILDSLKGIIIIFRLDNKLKERSELKRKKKEFESPSHQKTQSSSVPEELKRKKKE 62
HA+ +G +DSL+G I++F +D ++ E+ L +K SPS +T V
Sbjct: 9 HAIYRGFVDSLRGAIVLFYMDKRINEK--LLKK-----SPSKIETHGKEV---------- 51
Query: 63 FESPSHQKTQSSSVPEENKVWKRTVQCCLLNGGVFCGSILLFDHILLPFLLMILRLILGS 122
+ H ++ + E+KV KRT+QCC LNGGVF SIL+F+ LLPFL +L +I G
Sbjct: 52 --AIVHNPSKCYNQLRESKVLKRTIQCCALNGGVFWASILIFECGLLPFLKYLLSIIFGH 109
Query: 123 SSTYTQFYWTWINLVLSWTFNALWVLPLFTLSKVINSLWFQDIADSAYRYTQGRPHHFTS 182
S T W+W LS TF +WVLPLF LS+++NSLWFQDIADSAYRY QGRP +S
Sbjct: 110 SPTMGMTVWSWTKPFLSLTFGTVWVLPLFLLSRIVNSLWFQDIADSAYRYRQGRPLLLSS 169
Query: 183 LSKLLADTLFSLLIQSLFLVQTMLVSKLPLYLLSDSIGLIHMCLLYSLYAYEYKWYNQGW 242
+SKL+ADTLFS+L+Q+LFL Q MLVS++PL + D + LIHMCLLY+LYA+EYKW+N GW
Sbjct: 170 VSKLVADTLFSILVQALFLGQGMLVSRIPLPPIGDILALIHMCLLYALYAFEYKWFNMGW 229
Query: 243 ELHRRLTFIEHNFPYFLGFGLTLAVLTHVCSSYVIRQDILKTSSLFHLLFIILLLCCSEY 302
ELHRRL+FIE N+PYF+GFGL LAVLT + +SYVI + +F +LF + ++ +E
Sbjct: 230 ELHRRLSFIESNWPYFVGFGLPLAVLTQMPNSYVI------SGCVFSILFPLFIVSGNEA 283
Query: 303 Q---------LKLFSPVIAISNAVFNHTIRPAQ 326
+ LKLFSPVIAI+N +FN TI PA
Sbjct: 284 EPVTGVCDCPLKLFSPVIAIANTLFNKTIGPAN 316
|
Source: Megachile rotundata Species: Megachile rotundata Genus: Megachile Family: Megachilidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|332021725|gb|EGI62081.1| Etoposide-induced protein 2.4-like protein [Acromyrmex echinatior] | Back alignment and taxonomy information |
|---|
| >gi|380013070|ref|XP_003690593.1| PREDICTED: etoposide-induced protein 2.4-like [Apis florea] | Back alignment and taxonomy information |
|---|
| >gi|66550396|ref|XP_395483.2| PREDICTED: etoposide-induced protein 2.4-like [Apis mellifera] | Back alignment and taxonomy information |
|---|
| >gi|322798817|gb|EFZ20364.1| hypothetical protein SINV_03609 [Solenopsis invicta] | Back alignment and taxonomy information |
|---|
| >gi|340718019|ref|XP_003397470.1| PREDICTED: etoposide-induced protein 2.4 homolog [Bombus terrestris] | Back alignment and taxonomy information |
|---|
| >gi|156547143|ref|XP_001603315.1| PREDICTED: etoposide-induced protein 2.4 homolog [Nasonia vitripennis] | Back alignment and taxonomy information |
|---|
| >gi|350417590|ref|XP_003491496.1| PREDICTED: etoposide-induced protein 2.4 homolog [Bombus impatiens] | Back alignment and taxonomy information |
|---|
| >gi|307170914|gb|EFN63017.1| Etoposide-induced protein 2.4-like protein [Camponotus floridanus] | Back alignment and taxonomy information |
|---|
| >gi|307191725|gb|EFN75167.1| Etoposide-induced protein 2.4-like protein [Harpegnathos saltator] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 333 | ||||||
| UNIPROTKB|F1S776 | 342 | EI24 "Uncharacterized protein" | 0.801 | 0.780 | 0.403 | 1.4e-54 | |
| UNIPROTKB|O14681 | 340 | EI24 "Etoposide-induced protei | 0.801 | 0.785 | 0.406 | 1.8e-54 | |
| UNIPROTKB|F1PXS3 | 340 | EI24 "Uncharacterized protein" | 0.801 | 0.785 | 0.406 | 2.3e-54 | |
| RGD|1309868 | 340 | Ei24 "etoposide induced 2.4" [ | 0.801 | 0.785 | 0.406 | 3.7e-54 | |
| UNIPROTKB|Q4KM77 | 340 | Ei24 "Etoposide-induced protei | 0.801 | 0.785 | 0.406 | 3.7e-54 | |
| UNIPROTKB|Q08DE5 | 340 | EI24 "Etoposide-induced protei | 0.801 | 0.785 | 0.402 | 3.7e-54 | |
| MGI|MGI:108090 | 340 | Ei24 "etoposide induced 2.4 mR | 0.801 | 0.785 | 0.406 | 4.8e-54 | |
| UNIPROTKB|F1MWY6 | 340 | EI24 "Etoposide-induced protei | 0.801 | 0.785 | 0.399 | 1.6e-53 | |
| ZFIN|ZDB-GENE-050417-457 | 340 | ei24 "etoposide induced 2.4" [ | 0.801 | 0.785 | 0.388 | 2e-51 | |
| UNIPROTKB|F1P1R9 | 313 | EI24 "Uncharacterized protein" | 0.591 | 0.629 | 0.412 | 6.7e-43 |
| UNIPROTKB|F1S776 EI24 "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
Score = 537 (194.1 bits), Expect = 1.4e-54, Sum P(2) = 1.4e-54
Identities = 111/275 (40%), Positives = 164/275 (59%)
Query: 55 ELKRKKKEFESPSHQKTQSSSVPEEN--KVWKRTVQCCLLNGGVFCGSXXXXXXXXXXXX 112
E +R+++ + ++ QS +E+ ++ R QCC NGGVF S
Sbjct: 38 EEQRRRRASSVLAQRRAQSIERKQESEPRIVSRIFQCCAWNGGVFWFSLLLFYRVFIPVL 97
Query: 113 XXXXXXXXGSSSTYTQFYWTWINLVLSWTFNALWVLPLFTLSKVINSLWFQDIADSAYRY 172
G S + W+W+ L+ F+ALWVLPLF LSKV+N++WFQDIAD A+
Sbjct: 98 QSVTAQIIGDPSLHGDV-WSWLEFFLTSIFSALWVLPLFVLSKVVNAIWFQDIADLAFEV 156
Query: 173 TQGRPHHFTSLSKLLADTLFSLLIQSLFLVQTMLVSKLPLYLLSDSIGLIHMCLLYSLYA 232
+ +PH F S+SK++AD LF+LL+Q+LFL+Q M VS P++L+ + L+HM LLYSLY
Sbjct: 157 SGRKPHPFPSVSKIIADMLFNLLLQALFLLQGMFVSLFPIHLVGQLVSLLHMSLLYSLYC 216
Query: 233 YEYKWYNQGWELHRRLTFIEHNFPYFLGFGLTLAVLTHVCSSYVIRQD-----ILKTSSX 287
+EY+W+N+G E+H+RL+ IE N+PY+ GFGL LA LT + SSY++R IL
Sbjct: 217 FEYRWFNKGIEMHQRLSNIERNWPYYFGFGLPLAFLTAMQSSYIVRNSGCLFSILFPLFI 276
Query: 288 XXXXXXXXXXCCSEYQLKLFSPVIAISNAVFNHTI 322
+QL+LFS V+ +SN +F+ T+
Sbjct: 277 ISANEAKTPGKAYLFQLRLFSLVVFLSNRLFHKTV 311
|
|
| UNIPROTKB|O14681 EI24 "Etoposide-induced protein 2.4 homolog" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1PXS3 EI24 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
| RGD|1309868 Ei24 "etoposide induced 2.4" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q4KM77 Ei24 "Etoposide-induced protein 2.4 homolog" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q08DE5 EI24 "Etoposide-induced protein 2.4 homolog" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
| MGI|MGI:108090 Ei24 "etoposide induced 2.4 mRNA" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1MWY6 EI24 "Etoposide-induced protein 2.4 homolog" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
| ZFIN|ZDB-GENE-050417-457 ei24 "etoposide induced 2.4" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1P1R9 EI24 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 333 | |||
| pfam07264 | 205 | pfam07264, EI24, Etoposide-induced protein 2 | 8e-29 |
| >gnl|CDD|219354 pfam07264, EI24, Etoposide-induced protein 2 | Back alignment and domain information |
|---|
Score = 109 bits (276), Expect = 8e-29
Identities = 50/195 (25%), Positives = 86/195 (44%), Gaps = 10/195 (5%)
Query: 81 KVWKRTVQCCLLNGGVFCGSILLFDHILLPFLLMILRLILGSSSTYTQFYWTWINLVLSW 140
++ + + LLN +F G + +L P L +L L+ ++ + + L++
Sbjct: 12 RLRRLVLLPLLLNLLLFAGLLYFLFSLLGPLLDALLSLLWLGWLSWLLWILAVLLLLV-- 69
Query: 141 TFNALWVLPLFTLSKVINSLWFQDIADSAYR--YTQGRPHHFTSLSKLLADTLFSLLIQS 198
LW L + S + W D+A+ + Y P SL + LAD+L LL+
Sbjct: 70 ---LLWFLFVVVASLIAAPFWTPDLAEKVEKRHYPDLEPALGGSLPRSLADSLKKLLLFL 126
Query: 199 LFLVQTMLVSKLPLYLLSDSIGLIHMCLLYS-LYAYEYKWYNQGWELHRRLTFIEHNFPY 257
LFL+ + + +P+ + + + LL + L +EY Y R + N Y
Sbjct: 127 LFLLLLLPLYFIPV--VGLVLAPVLWFLLNAWLLGFEYLDYAADRSFEERRALLRRNRAY 184
Query: 258 FLGFGLTLAVLTHVC 272
FLGFGL LA+L +
Sbjct: 185 FLGFGLLLALLLSIP 199
|
4 (EI24). This family contains a number of eukaryotic etoposide-induced 2.4 (EI24) proteins approximately 350 residues long as well as bacterial CysZ proteins (formerly known as DUF540). In cells treated with the cytotoxic drug etoposide, EI24 is induced by p53. It has been suggested to play an important role in negative cell growth control. Length = 205 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 333 | |||
| KOG3966|consensus | 360 | 100.0 | ||
| PF07264 | 219 | EI24: Etoposide-induced protein 2.4 (EI24); PDB: 3 | 99.92 | |
| PRK04949 | 251 | putative sulfate transport protein CysZ; Validated | 98.78 | |
| PRK12768 | 240 | CysZ-like protein; Reviewed | 98.19 | |
| COG2981 | 250 | CysZ Uncharacterized protein involved in cysteine | 97.52 | |
| KOG3088|consensus | 313 | 91.6 |
| >KOG3966|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-87 Score=626.48 Aligned_cols=297 Identities=39% Similarity=0.670 Sum_probs=280.1
Q ss_pred ChhhhhhhhhhhhhhHHHHhhhhhHHHHHHHHhhhhhccCCCCccccCCCCchHHHHhhhhccCCCCccCCCCCCCcchh
Q psy1741 1 MGHALLKGILDSLKGIIIIFRLDNKLKERSELKRKKKEFESPSHQKTQSSSVPEELKRKKKEFESPSHQKTQSSSVPEEN 80 (333)
Q Consensus 1 ~~~~~~~g~~ds~~g~~~i~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (333)
+++|.++|++||++|++++...|+|.++++||+++|+ +++++.+||++....| ++.||
T Consensus 27 ~~~D~arg~~ds~~gi~~v~iree~akq~~ee~~~r~----------------~~~vL~~rrp~~~~~k------~~~Ep 84 (360)
T KOG3966|consen 27 IARDFARGFIDSFKGITFVRIREEEAKQVKEEPPKRV----------------ERTVLMMRRPKQGIFK------RPPEP 84 (360)
T ss_pred HHHHHhhcCCccccchhhhhhhHHHHHHhhhcCCchH----------------HHHHHhhcCccccccc------CCCCC
Confidence 3689999999999999999999999999999999998 5788888886665544 45999
Q ss_pred HHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy1741 81 KVWKRTVQCCLLNGGVFCGSILLFDHILLPFLLMILRLILGSSSTYTQFYWTWINLVLSWTFNALWVLPLFTLSKVINSL 160 (333)
Q Consensus 81 ~v~~r~~qc~lLNg~vFl~SIlif~~~l~P~l~~~l~~~~g~~~~~~~~~~~~l~~~l~~~f~~lWvlPly~lS~ilNs~ 160 (333)
++.|+..|||++||+++|.|+++|+++++|+|+.+++.+.| ++++|+.+|+|++++|+.+|+..||+|+|++||++|++
T Consensus 85 ~i~k~~F~cc~wngg~~w~s~llf~~v~ipiL~~~~s~f~g-~~s~h~~vw~wl~~~ls~lfg~iwVlPiF~lSkiV~al 163 (360)
T KOG3966|consen 85 PIKKDSFLCCLWNGGAMWISFLLFWQVCIPILGLFFSFFDG-TDSGHNVVWGWLHPILSLLFGYIWVLPIFFLSKIVQAL 163 (360)
T ss_pred chHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHheecc-CCccccchHhhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999998888 66678899999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHcCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHhhcceeeecC
Q psy1741 161 WFQDIADSAYRYTQGRPHHFTSLSKLLADTLFSLLIQSLFLVQTMLVSKLPLYLLSDSIGLIHMCLLYSLYAYEYKWYNQ 240 (333)
Q Consensus 161 Wf~dIA~~a~~~~~~~p~~~~svs~~iad~ly~vLl~~~Fllq~~lv~~iPip~IG~~l~fl~ms~LyS~YcFEYkW~~~ 240 (333)
||+|||++||++.|++|++.+++|+++||++++.|+|++|++|+|+++++|||+||+.++++|||+|||+|||||+|.|+
T Consensus 164 WF~DIa~aa~rv~k~~P~p~p~~Sk~~Ad~Lfs~l~Q~lFLiQgMlv~l~Pi~lVg~~i~~lHm~LLySlYcFeY~wfn~ 243 (360)
T KOG3966|consen 164 WFSDIAGAAMRVLKLPPPPVPPFSKMLADTLFSALHQILFLIQGMLVQLLPIPLVGPVIVYLHMALLYSLYCFEYFWFNY 243 (360)
T ss_pred HHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcChhhcchHHHHHHHHHHHHHHHHhhhhccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcchHHHHHHHHhhchhhhchhhHHHHHHhhccchhhhccchhhhhHHHHH---HHHHhcccc------ccccccchhHH
Q psy1741 241 GWELHRRLTFIEHNFPYFLGFGLTLAVLTHVCSSYVIRQDILKTSSLFHLL---FIILLLCCS------EYQLKLFSPVI 311 (333)
Q Consensus 241 g~~L~~Rl~~~E~~WaYFlGFG~p~tllt~~~~s~~v~~~~~~~~~ifslL---FII~a~~~~------~~~L~iF~p~~ 311 (333)
|||+|||+++||+|||||+|||+|+|++|.+.+|+++|+| +||+| |||++-||+ .+++++|+||+
T Consensus 244 g~e~hrRl~~iE~nWPYffGFG~PLa~lt~~sSs~ivssc------iFsilFPlFIis~neak~p~~~~~~~lrlfs~Vv 317 (360)
T KOG3966|consen 244 GLEFHRRLDIIESNWPYFFGFGTPLALLTSISSSMIVSSC------IFSILFPLFIISSNEAKYPANWNRKYLRLFSKVV 317 (360)
T ss_pred cHHHHHHHHHHHhcCchhccCCcHHHHHHhhhhhHHHHHH------HHHHHHHHHeecccccCCCchHHHHHHHhcchhh
Confidence 9999999999999999999999999999999999999999 99999 899996666 46899999999
Q ss_pred HHHHHHHhhhcCccc
Q psy1741 312 AISNAVFNHTIRPAQ 326 (333)
Q Consensus 312 ~~~n~~f~~~~~~~~ 326 (333)
.++|+++.++.+-++
T Consensus 318 F~snrl~~kt~yvq~ 332 (360)
T KOG3966|consen 318 FCSNRLYMKTEYVQK 332 (360)
T ss_pred hhhhHHHHHHHHHHH
Confidence 999999998876443
|
|
| >PF07264 EI24: Etoposide-induced protein 2 | Back alignment and domain information |
|---|
| >PRK04949 putative sulfate transport protein CysZ; Validated | Back alignment and domain information |
|---|
| >PRK12768 CysZ-like protein; Reviewed | Back alignment and domain information |
|---|
| >COG2981 CysZ Uncharacterized protein involved in cysteine biosynthesis [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
| >KOG3088|consensus | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 333 | |||
| 3tx3_A | 249 | Uncharacterized protein involved in cysteine BIOS; | 7e-15 |
| >3tx3_A Uncharacterized protein involved in cysteine BIOS; structural genomics, PSI-biology, NEW YORK consortium on MEM protein structure, nycomps; HET: LDA; 2.30A {Idiomarina loihiensis} Length = 249 | Back alignment and structure |
|---|
Score = 72.4 bits (177), Expect = 7e-15
Identities = 32/195 (16%), Positives = 65/195 (33%), Gaps = 10/195 (5%)
Query: 81 KVWKRTVQCCLLNGGVFCGSILLFDHILLPFLLMILRLILGSSSTYTQFYWTWINLVLSW 140
+ + V L N +F + + +L + + Q+ + +
Sbjct: 28 GLRRYVVVPILTNLILFSLAFTWLYGEVDYWL----NRFMSWLPDFFQWLEFILWPLAVI 83
Query: 141 TFNALWVLPLFTLSKVINSLWFQDIADSAYRYTQGRPHHFTSLSKLLADTL------FSL 194
T AL+ T+ +I + + +A+ RY G L D
Sbjct: 84 TIIALFSFIFSTIMHLIAAPFNGLLAEKVERYESGESLGDEGFLGLFKDIPRTLKREMQK 143
Query: 195 LIQSLFLVQTMLVSKLPLYLLSDSIGLIHMCLLYSLYAYEYKWYNQGWELHRRLTFIEHN 254
L+ + + L + ++ + I +C + S+ +Y + N R + +
Sbjct: 144 LMYYIPRALGFFLLSLVIPVIGQVLWYIFVCWMMSIQYLDYPFDNHKLSFPRMRSELHQQ 203
Query: 255 FPYFLGFGLTLAVLT 269
LGFG + VLT
Sbjct: 204 RSKTLGFGFGVTVLT 218
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 333 | |||
| 3tx3_A | 249 | Uncharacterized protein involved in cysteine BIOS; | 98.84 |
| >3tx3_A Uncharacterized protein involved in cysteine BIOS; structural genomics, PSI-biology, NEW YORK consortium on MEM protein structure, nycomps; HET: LDA; 2.30A {Idiomarina loihiensis} | Back alignment and structure |
|---|
Probab=98.84 E-value=1.2e-07 Score=88.45 Aligned_cols=185 Identities=18% Similarity=0.239 Sum_probs=127.5
Q ss_pred chhHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcchhhHHHHHHHHHHHHHH-HHHHHHH---HH
Q psy1741 78 EENKVWKRTVQCCLLNGGVFCGSILLFDHILLPFLLMILRLILGSSSTYTQFYWTWINLVLSWTFNA-LWVLPLF---TL 153 (333)
Q Consensus 78 ~~~~v~~r~~qc~lLNg~vFl~SIlif~~~l~P~l~~~l~~~~g~~~~~~~~~~~~l~~~l~~~f~~-lWvlPly---~l 153 (333)
.+|++++=++.-.++|.++|.+....+-.-+...+.+..+. -+ +-.+|++..+..+..+ +-+.-.| .+
T Consensus 25 ~~p~lr~~vl~Pllinl~L~~~~~~~~~~~~~~~i~~~~~~----lp----~Wl~wl~~ll~~l~~~~~lll~~~lf~~v 96 (249)
T 3tx3_A 25 RTKGLRRYVVVPILTNLILFSLAFTWLYGEVDYWLNRFMSW----LP----DFFQWLEFILWPLAVITIIALFSFIFSTI 96 (249)
T ss_dssp TSTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-----------------------CTTHHHHHHHHHHHHHHHHHHHH
T ss_pred cCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC----CC----chHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45678888899999999876666544422222222211110 00 1114444333333211 1111112 35
Q ss_pred HHHHHHHhHHHHHHHHHHHcCCCCCCc-------chhHHHHHHHHHHHHHHHHHHHHHHHHhc-ccccchHHHHHHHHHH
Q psy1741 154 SKVINSLWFQDIADSAYRYTQGRPHHF-------TSLSKLLADTLFSLLIQSLFLVQTMLVSK-LPLYLLSDSIGLIHMC 225 (333)
Q Consensus 154 S~ilNs~Wf~dIA~~a~~~~~~~p~~~-------~svs~~iad~ly~vLl~~~Fllq~~lv~~-iPip~IG~~l~fl~ms 225 (333)
+-++.+-++.++|++.-+...|+|.+. ..+.+++.|++-.+.......+-..++++ +| .+|+++.++.-+
T Consensus 97 a~~IaapF~~~LAE~VE~~l~g~~~~~~~~~~~~~~l~r~l~~~l~~l~~~l~~~l~ll~L~f~IP--~vg~vl~~~~~~ 174 (249)
T 3tx3_A 97 MHLIAAPFNGLLAEKVERYESGESLGDEGFLGLFKDIPRTLKREMQKLMYYIPRALGFFLLSLVIP--VIGQVLWYIFVC 174 (249)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCCTTCSSGGGSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHST--THHHHHHHHHHH
T ss_pred HHHHHHHhhHHHHHHHHHHHcCCCCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc--hHHHHHHHHHHH
Confidence 566778899999999877666654432 23457888888888877777777778888 89 799999999999
Q ss_pred HHHHHhhcceeeecCCcchHHHHHHHHhhchhhhchhhHHHHHHhhc
Q psy1741 226 LLYSLYAYEYKWYNQGWELHRRLTFIEHNFPYFLGFGLTLAVLTHVC 272 (333)
Q Consensus 226 ~LyS~YcFEYkW~~~g~~L~~Rl~~~E~~WaYFlGFG~p~tllt~~~ 272 (333)
|+.+.=-+||-..++|++..+|.+...+|-+-..|||.+.++++..+
T Consensus 175 ~~lg~ey~d~~~~r~~~~~~~~~~~lr~~r~~~~~fG~~~~ll~~IP 221 (249)
T 3tx3_A 175 WMMSIQYLDYPFDNHKLSFPRMRSELHQQRSKTLGFGFGVTVLTMIP 221 (249)
T ss_dssp HHHHHHHHHHHHHHTTCCHHHHHHHHHTTHHHHHHHHHHHHHHTTST
T ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999988774
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00