Psyllid ID: psy17710

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70-----
Protein Sequence
MTVHAVHIKTKLCNLIEAMMRRRDDLAFRREMSFRNKLVDYLMDWVLGSANQVTIPPTPGESFVSISRDLLKFIW
Secondary Structure (PSIPRED)
cccHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHcccccccccccccccEEEEcHHHHHHcc
Coil and Loop (DISEMBL)
MTVHAVHIKTKLCNLIEAMMRRRDDLAFRREMSFRNKLVDYLMDWVLGsanqvtipptpgesFVSISRDLLKFIW
Flexible Loop (DISEMBL)
MTVHAVHIKTKLCNLIEAMMRRRDDLAFRREMSFRNKLVDYLMDWVLGSANqvtipptpgesfvSISRDLLKFIW
Low Complexity Region (SEG)
MTVHAVHIKTKLCNLIEAMMRRRDDLAFRREMSFRNKLVDYLMDWVLGSANQVTIPPTPGESFVSISRDLLKFIW
Disordered region (IsUnstruct)
***HAVHIKTKLCNLIEAMMRRRDDLAFRREMSFRNKLVDYLMDWVLGSANQVTIPPTPGESFVSISRDLLKFI*
Disordered Region (DISOPRED)
****AVHIKTKLCNLIEAMMRRRDDLAFRREMSFRNKLVDYLMDWVL*******************SRDLLKFIW
Disordered Region (DISEMBL)
MTVHAVHIKTKLCNLIEAMMRRRDDLAFRREMSFRNKLVDYLMDWVLGSANQVTIPPTPGESFVSISRDLLKFIW
Disordered Region (DISPRO)
*TVHAVHIKTKLCNLIEAMMRRRDDLAFRREMSFRNKLVDYLMDWVLGSANQVTIPPTPGESFVSISRDLLKFIW
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MTVHAVHIKTKLCNLIEAMMRRRDDLAFRREMSFRNKLVDYLMDWVLGSANQVTIPPTPGESFVSISRDLLKFIW
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	75	2.2.26 [Sep-21-2011]
P21359	2839	Neurofibromin OS=Homo sap	yes	N/A	0.68	0.017	0.666	6e-16
Q04690	2841	Neurofibromin OS=Mus musc	yes	N/A	0.68	0.017	0.666	6e-16
P97526	2820	Neurofibromin OS=Rattus n	yes	N/A	0.68	0.018	0.666	7e-16

>sp|P21359|NF1_HUMAN Neurofibromin OS=Homo sapiens GN=NF1 PE=1 SV=2

 Score = 82.8 bits (203), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 34/51 (66%), Positives = 43/51 (84%)

Query: 3    VHAVHIKTKLCNLIEAMMRRRDDLAFRREMSFRNKLVDYLMDWVLGSANQV 53
            VHA+ IKTKLC L+E MM RRDDL+F +EM FRNK+V+YL DWV+G++NQ 
Sbjct: 1006 VHAIQIKTKLCQLVEVMMARRDDLSFCQEMKFRNKMVEYLTDWVMGTSNQA 1056

Stimulates the GTPase activity of Ras. NF1 shows greater affinity for Ras GAP, but lower specific activity. May be a regulator of Ras activity.
Homo sapiens (taxid: 9606)

>sp|Q04690|NF1_MOUSE Neurofibromin OS=Mus musculus GN=Nf1 PE=1 SV=1

 Score = 82.8 bits (203), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 34/51 (66%), Positives = 43/51 (84%)

Query: 3    VHAVHIKTKLCNLIEAMMRRRDDLAFRREMSFRNKLVDYLMDWVLGSANQV 53
            VHA+ IKTKLC L+E MM RRDDL+F +EM FRNK+V+YL DWV+G++NQ 
Sbjct: 1008 VHAIQIKTKLCQLVEVMMARRDDLSFCQEMKFRNKMVEYLTDWVMGTSNQA 1058

Stimulates the GTPase activity of Ras. NF1 shows greater affinity for Ras GAP, but lower specific activity. May be a regulator of Ras activity.

Mus musculus (taxid: 10090)

>sp|P97526|NF1_RAT Neurofibromin OS=Rattus norvegicus GN=Nf1 PE=1 SV=1

 Score = 82.8 bits (203), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 34/51 (66%), Positives = 43/51 (84%)

Query: 3    VHAVHIKTKLCNLIEAMMRRRDDLAFRREMSFRNKLVDYLMDWVLGSANQV 53
            VHA+ IKTKLC L+E MM RRDDL+F +EM FRNK+V+YL DWV+G++NQ 
Sbjct: 1008 VHAIQIKTKLCQLVEVMMARRDDLSFCQEMKFRNKMVEYLTDWVMGTSNQA 1058


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.328    0.138    0.429 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,267,502
Number of Sequences: 539616
Number of extensions: 781635
Number of successful extensions: 2238
Number of sequences better than 100.0: 4
Number of HSP's better than 100.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 2234
Number of HSP's gapped (non-prelim): 4
length of query: 75
length of database: 191,569,459
effective HSP length: 46
effective length of query: 29
effective length of database: 166,747,123
effective search space: 4835666567
effective search space used: 4835666567
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 55 (25.8 bits)

Stimulates the GTPase activity of Ras. NF1 shows greater affinity for Ras GAP, but lower specific activity. May be a regulator of Ras activity.

Rattus norvegicus (taxid: 10116)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	75
170053096	2771	neurofibromin [Culex quinquefasciatus] g	0.906	0.024	0.657	3e-20
157118704	2762	neurofibromin [Aedes aegypti] gi|1088756	0.906	0.024	0.657	3e-20
347969332	3047	AGAP003140-PB [Anopheles gambiae str. PE	0.906	0.022	0.657	6e-20
347969334	2790	AGAP003140-PA [Anopheles gambiae str. PE	0.906	0.024	0.657	7e-20
312374472	2545	hypothetical protein AND_15871 [Anophele	0.906	0.026	0.657	7e-20
321463713	2635	hypothetical protein DAPPUDRAFT_307021 [	0.893	0.025	0.666	2e-19
380026922	2730	PREDICTED: neurofibromin-like [Apis flor	0.906	0.024	0.614	7e-19
328793485	2741	PREDICTED: neurofibromin [Apis mellifera	0.906	0.024	0.614	7e-19
345490029	2731	PREDICTED: neurofibromin-like [Nasonia v	0.906	0.024	0.628	4e-18
242014915	2686	Neurofibromin, putative [Pediculus human	0.906	0.025	0.585	2e-17

>gi|170053096|ref|XP_001862517.1| neurofibromin [Culex quinquefasciatus] gi|167873772|gb|EDS37155.1| neurofibromin [Culex quinquefasciatus]

 Score =  102 bits (254), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 46/70 (65%), Positives = 60/70 (85%), Gaps = 2/70 (2%)

Query: 1    MTVHAVHIKTKLCNLIEAMMRRRDDLAFRREMSFRNKLVDYLMDWVLGSANQVTIPPTPG 60
            MTVHA+HIKTKLC L+E MM+RRDDLAFR+EM FRNKLV+YL DWV+G+++Q+  PP+ G
Sbjct: 997  MTVHAIHIKTKLCQLVEVMMKRRDDLAFRQEMKFRNKLVEYLTDWVMGTSHQIA-PPSSG 1055

Query: 61   ESFVSISRDL 70
            +  + I+RDL
Sbjct: 1056 DVTI-ITRDL 1064

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157118704|ref|XP_001653220.1| neurofibromin [Aedes aegypti] gi|108875642|gb|EAT39867.1| AAEL008371-PA [Aedes aegypti]

 Score =  102 bits (253), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 46/70 (65%), Positives = 60/70 (85%), Gaps = 2/70 (2%)

Query: 1    MTVHAVHIKTKLCNLIEAMMRRRDDLAFRREMSFRNKLVDYLMDWVLGSANQVTIPPTPG 60
            MTVHA+HIKTKLC L+E MM+RRDDLAFR+EM FRNKLV+YL DWV+G+++Q+  PP+ G
Sbjct: 997  MTVHAIHIKTKLCQLVEVMMKRRDDLAFRQEMKFRNKLVEYLTDWVMGTSHQIA-PPSSG 1055

Query: 61   ESFVSISRDL 70
            +  + I+RDL
Sbjct: 1056 DVTI-ITRDL 1064

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|347969332|ref|XP_003436404.1| AGAP003140-PB [Anopheles gambiae str. PEST] gi|333468476|gb|EGK96961.1| AGAP003140-PB [Anopheles gambiae str. PEST]

 Score =  101 bits (251), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 46/70 (65%), Positives = 59/70 (84%), Gaps = 2/70 (2%)

Query: 1    MTVHAVHIKTKLCNLIEAMMRRRDDLAFRREMSFRNKLVDYLMDWVLGSANQVTIPPTPG 60
            MTVHA+HIKTKLC L+E MM+RRDDLAFR+EM FRNKLV+YL DWV+G+++Q+  PP  G
Sbjct: 1000 MTVHAIHIKTKLCQLVEVMMKRRDDLAFRQEMKFRNKLVEYLTDWVMGTSHQIA-PPGSG 1058

Query: 61   ESFVSISRDL 70
            +  + I+RDL
Sbjct: 1059 DVTI-ITRDL 1067

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|347969334|ref|XP_312829.4| AGAP003140-PA [Anopheles gambiae str. PEST] gi|333468475|gb|EAA08440.4| AGAP003140-PA [Anopheles gambiae str. PEST]

 Score =  101 bits (251), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 46/70 (65%), Positives = 59/70 (84%), Gaps = 2/70 (2%)

Query: 1    MTVHAVHIKTKLCNLIEAMMRRRDDLAFRREMSFRNKLVDYLMDWVLGSANQVTIPPTPG 60
            MTVHA+HIKTKLC L+E MM+RRDDLAFR+EM FRNKLV+YL DWV+G+++Q+  PP  G
Sbjct: 1000 MTVHAIHIKTKLCQLVEVMMKRRDDLAFRQEMKFRNKLVEYLTDWVMGTSHQIA-PPGSG 1058

Query: 61   ESFVSISRDL 70
            +  + I+RDL
Sbjct: 1059 DVTI-ITRDL 1067

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|312374472|gb|EFR22022.1| hypothetical protein AND_15871 [Anopheles darlingi]

 Score =  101 bits (251), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 46/70 (65%), Positives = 59/70 (84%), Gaps = 2/70 (2%)

Query: 1    MTVHAVHIKTKLCNLIEAMMRRRDDLAFRREMSFRNKLVDYLMDWVLGSANQVTIPPTPG 60
            MTVHA+HIKTKLC L+E MM+RRDDLAFR+EM FRNKLV+YL DWV+G+++Q+  PP  G
Sbjct: 999  MTVHAIHIKTKLCQLVEVMMKRRDDLAFRQEMKFRNKLVEYLTDWVMGTSHQIA-PPGSG 1057

Query: 61   ESFVSISRDL 70
            +  + I+RDL
Sbjct: 1058 DVTI-ITRDL 1066

Source: Anopheles darlingi

Species: Anopheles darlingi

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|321463713|gb|EFX74727.1| hypothetical protein DAPPUDRAFT_307021 [Daphnia pulex]

 Score =  100 bits (248), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 46/69 (66%), Positives = 58/69 (84%), Gaps = 2/69 (2%)

Query: 2    TVHAVHIKTKLCNLIEAMMRRRDDLAFRREMSFRNKLVDYLMDWVLGSANQVTIPPTPGE 61
            TVHA+HIKTKLC L+E MM RRDDLAFR+EM FRNKLV+YL DWV+G+++Q+  PP+ G+
Sbjct: 977  TVHAIHIKTKLCQLVETMMARRDDLAFRQEMKFRNKLVEYLTDWVMGNSHQIA-PPSSGD 1035

Query: 62   SFVSISRDL 70
               SI+RDL
Sbjct: 1036 -VSSITRDL 1043

Source: Daphnia pulex

Species: Daphnia pulex

Genus: Daphnia

Family: Daphniidae

Order: Diplostraca

Class: Branchiopoda

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380026922|ref|XP_003697188.1| PREDICTED: neurofibromin-like [Apis florea]

 Score = 97.8 bits (242), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 43/70 (61%), Positives = 56/70 (80%), Gaps = 2/70 (2%)

Query: 1    MTVHAVHIKTKLCNLIEAMMRRRDDLAFRREMSFRNKLVDYLMDWVLGSANQVTIPPTPG 60
            MTVH++HIKT+LC L+EAMM+RRDDLAFR+EM FRNKLV+YL DWV+G+ +Q+T  P+  
Sbjct: 961  MTVHSIHIKTELCQLVEAMMKRRDDLAFRQEMKFRNKLVEYLTDWVMGATHQIT--PSAS 1018

Query: 61   ESFVSISRDL 70
                  +RDL
Sbjct: 1019 GDLTVYTRDL 1028

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328793485|ref|XP_624747.3| PREDICTED: neurofibromin [Apis mellifera]

 Score = 97.8 bits (242), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 43/70 (61%), Positives = 56/70 (80%), Gaps = 2/70 (2%)

Query: 1    MTVHAVHIKTKLCNLIEAMMRRRDDLAFRREMSFRNKLVDYLMDWVLGSANQVTIPPTPG 60
            MTVH++HIKT+LC L+EAMM+RRDDLAFR+EM FRNKLV+YL DWV+G+ +Q+T  P+  
Sbjct: 960  MTVHSIHIKTELCQLVEAMMKRRDDLAFRQEMKFRNKLVEYLTDWVMGATHQIT--PSAS 1017

Query: 61   ESFVSISRDL 70
                  +RDL
Sbjct: 1018 GDLTVYTRDL 1027

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|345490029|ref|XP_001602698.2| PREDICTED: neurofibromin-like [Nasonia vitripennis]

 Score = 95.5 bits (236), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 44/70 (62%), Positives = 54/70 (77%), Gaps = 2/70 (2%)

Query: 1    MTVHAVHIKTKLCNLIEAMMRRRDDLAFRREMSFRNKLVDYLMDWVLGSANQVTIPPTPG 60
            MTVHA+HIKTKLC L+E MM+RRDDLAFR+EM FRNKLV+YL DWV+G+ +   I P  G
Sbjct: 970  MTVHAIHIKTKLCQLVEVMMKRRDDLAFRQEMKFRNKLVEYLTDWVMGTTH--PIAPPGG 1027

Query: 61   ESFVSISRDL 70
                 I+R+L
Sbjct: 1028 SDSTLITREL 1037

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242014915|ref|XP_002428128.1| Neurofibromin, putative [Pediculus humanus corporis] gi|212512659|gb|EEB15390.1| Neurofibromin, putative [Pediculus humanus corporis]

 Score = 92.8 bits (229), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 41/70 (58%), Positives = 58/70 (82%), Gaps = 2/70 (2%)

Query: 1    MTVHAVHIKTKLCNLIEAMMRRRDDLAFRREMSFRNKLVDYLMDWVLGSANQVTIPPTPG 60
            MTVH++H KTKLC L+E MM+RRD+LAFR+EM FRNK+V+YL DW++GS++Q+ +PP   
Sbjct: 964  MTVHSLHNKTKLCQLVEVMMKRRDELAFRQEMKFRNKMVEYLTDWIMGSSHQM-VPPGNA 1022

Query: 61   ESFVSISRDL 70
            +  + I+RDL
Sbjct: 1023 D-VIPITRDL 1031

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	75
FB|FBgn0015269	2802	Nf1 "Neurofibromin 1" [Drosoph	0.933	0.024	0.563	7.9e-17
UNIPROTKB|E1BTI4	2814	NF1 "Neurofibromin" [Gallus ga	0.84	0.022	0.573	2.2e-14
UNIPROTKB|E1C9F6	2835	NF1 "Neurofibromin" [Gallus ga	0.84	0.022	0.573	2.2e-14
UNIPROTKB|F1M139	1406	Nf1 "Neurofibromin" [Rattus no	0.666	0.035	0.68	5.5e-14
UNIPROTKB|J3KSB5	1656	NF1 "Neurofibromin truncated"	0.666	0.030	0.68	6.7e-14
ZFIN|ZDB-GENE-091111-4	2759	nf1b "neurofibromin 1b" [Danio	0.666	0.018	0.68	9.4e-14
UNIPROTKB|Q9YGV2	2763	NF1 "Neurofibromatosis type 1"	0.666	0.018	0.68	9.4e-14
UNIPROTKB|H0Y465	2502	NF1 "Neurofibromin truncated"	0.666	0.019	0.68	1.1e-13
UNIPROTKB|J9JHM1	2774	NF1 "Uncharacterized protein"	0.666	0.018	0.68	1.2e-13
UNIPROTKB|I3LV00	2795	NF1 "Uncharacterized protein"	0.666	0.017	0.68	1.2e-13

FB|FBgn0015269 Nf1 "Neurofibromin 1" [Drosophila melanogaster (taxid:7227)]

 Score = 225 (84.3 bits), Expect = 7.9e-17, P = 7.9e-17
 Identities = 40/71 (56%), Positives = 57/71 (80%)

Query:     1 MTVHAVHIKTKLCNLIEAMMRRRDDLAFRREMSFRNKLVDYLMDWVLGSANQVTIPPTPG 60
             MTV+A+ IKTKLC L+E MM+RRDDLAFR+EM FRNKLV+YL DWV+G+++Q+  PP+  
Sbjct:  1033 MTVYAIRIKTKLCQLVEVMMKRRDDLAFRQEMKFRNKLVEYLTDWVMGTSHQIA-PPSSA 1091

Query:    61 ESFVSISRDLL 71
             ++ +  +  L+
Sbjct:  1092 DAAILTNTSLI 1102

GO:0045762 "positive regulation of adenylate cyclase activity" evidence=IMP

GO:0005099 "Ras GTPase activator activity" evidence=ISS;IDA

GO:0040014 "regulation of multicellular organism growth" evidence=IMP

GO:0019933 "cAMP-mediated signaling" evidence=IMP

GO:0008355 "olfactory learning" evidence=IMP

GO:0007614 "short-term memory" evidence=IMP

GO:0042066 "perineurial glial growth" evidence=IGI

GO:0007265 "Ras protein signal transduction" evidence=IGI

GO:0045475 "locomotor rhythm" evidence=IMP

GO:0040018 "positive regulation of multicellular organism growth" evidence=IMP

GO:0046578 "regulation of Ras protein signal transduction" evidence=IMP

GO:0006979 "response to oxidative stress" evidence=IMP

GO:0009408 "response to heat" evidence=IMP

GO:0008340 "determination of adult lifespan" evidence=IMP

GO:0007616 "long-term memory" evidence=IMP

GO:0005737 "cytoplasm" evidence=IBA

GO:0032320 "positive regulation of Ras GTPase activity" evidence=IBA

GO:0031235 "intrinsic to internal side of plasma membrane" evidence=IBA

GO:0046580 "negative regulation of Ras protein signal transduction" evidence=IBA

UNIPROTKB|E1BTI4 NF1 "Neurofibromin" [Gallus gallus (taxid:9031)]

 Score = 202 (76.2 bits), Expect = 2.2e-14, P = 2.2e-14
 Identities = 39/68 (57%), Positives = 50/68 (73%)

Query:     3 VHAVHIKTKLCNLIEAMMRRRDDLAFRREMSFRNKLVDYLMDWVLGSANQVTIPPTPGES 62
             VHA+ IKTKLC L+E MM RRDDL+F +EM FRNK+V+YL DWV+G++NQ T      E 
Sbjct:  1001 VHAIQIKTKLCQLVEVMMERRDDLSFCQEMKFRNKMVEYLTDWVMGTSNQAT-----DED 1055

Query:    63 FVSISRDL 70
                ++RDL
Sbjct:  1056 VKCLTRDL 1063

GO:0005096 "GTPase activator activity" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0007165 "signal transduction" evidence=IEA

GO:0051056 "regulation of small GTPase mediated signal transduction" evidence=IEA

UNIPROTKB|E1C9F6 NF1 "Neurofibromin" [Gallus gallus (taxid:9031)]

 Score = 202 (76.2 bits), Expect = 2.2e-14, P = 2.2e-14
 Identities = 39/68 (57%), Positives = 50/68 (73%)

Query:     3 VHAVHIKTKLCNLIEAMMRRRDDLAFRREMSFRNKLVDYLMDWVLGSANQVTIPPTPGES 62
             VHA+ IKTKLC L+E MM RRDDL+F +EM FRNK+V+YL DWV+G++NQ T      E 
Sbjct:  1001 VHAIQIKTKLCQLVEVMMERRDDLSFCQEMKFRNKMVEYLTDWVMGTSNQAT-----DED 1055

Query:    63 FVSISRDL 70
                ++RDL
Sbjct:  1056 VKCLTRDL 1063

GO:0000165 "MAPK cascade" evidence=IEA

GO:0001649 "osteoblast differentiation" evidence=IEA

GO:0001656 "metanephros development" evidence=IEA

GO:0001666 "response to hypoxia" evidence=IEA

GO:0001889 "liver development" evidence=IEA

GO:0001937 "negative regulation of endothelial cell proliferation" evidence=IEA

GO:0001938 "positive regulation of endothelial cell proliferation" evidence=IEA

GO:0001953 "negative regulation of cell-matrix adhesion" evidence=IEA

GO:0005099 "Ras GTPase activator activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0007265 "Ras protein signal transduction" evidence=IEA

GO:0007406 "negative regulation of neuroblast proliferation" evidence=IEA

GO:0007507 "heart development" evidence=IEA

GO:0007519 "skeletal muscle tissue development" evidence=IEA

GO:0008542 "visual learning" evidence=IEA

GO:0014065 "phosphatidylinositol 3-kinase cascade" evidence=IEA

GO:0016525 "negative regulation of angiogenesis" evidence=IEA

GO:0021510 "spinal cord development" evidence=IEA

GO:0021897 "forebrain astrocyte development" evidence=IEA

GO:0021915 "neural tube development" evidence=IEA

GO:0021987 "cerebral cortex development" evidence=IEA

GO:0022011 "myelination in peripheral nervous system" evidence=IEA

GO:0030036 "actin cytoskeleton organization" evidence=IEA

GO:0030199 "collagen fibril organization" evidence=IEA

GO:0030325 "adrenal gland development" evidence=IEA

GO:0030336 "negative regulation of cell migration" evidence=IEA

GO:0030424 "axon" evidence=IEA

GO:0030425 "dendrite" evidence=IEA

GO:0032228 "regulation of synaptic transmission, GABAergic" evidence=IEA

GO:0035021 "negative regulation of Rac protein signal transduction" evidence=IEA

GO:0042060 "wound healing" evidence=IEA

GO:0042992 "negative regulation of transcription factor import into nucleus" evidence=IEA

GO:0043407 "negative regulation of MAP kinase activity" evidence=IEA

GO:0043473 "pigmentation" evidence=IEA

GO:0043525 "positive regulation of neuron apoptotic process" evidence=IEA

GO:0043535 "regulation of blood vessel endothelial cell migration" evidence=IEA

GO:0045124 "regulation of bone resorption" evidence=IEA

GO:0045671 "negative regulation of osteoclast differentiation" evidence=IEA

GO:0045762 "positive regulation of adenylate cyclase activity" evidence=IEA

GO:0046929 "negative regulation of neurotransmitter secretion" evidence=IEA

GO:0048147 "negative regulation of fibroblast proliferation" evidence=IEA

GO:0048169 "regulation of long-term neuronal synaptic plasticity" evidence=IEA

GO:0048485 "sympathetic nervous system development" evidence=IEA

GO:0048593 "camera-type eye morphogenesis" evidence=IEA

GO:0048712 "negative regulation of astrocyte differentiation" evidence=IEA

GO:0048715 "negative regulation of oligodendrocyte differentiation" evidence=IEA

GO:0048745 "smooth muscle tissue development" evidence=IEA

GO:0048844 "artery morphogenesis" evidence=IEA

GO:0048853 "forebrain morphogenesis" evidence=IEA

UNIPROTKB|F1M139 Nf1 "Neurofibromin" [Rattus norvegicus (taxid:10116)]

 Score = 195 (73.7 bits), Expect = 5.5e-14, P = 5.5e-14
 Identities = 34/50 (68%), Positives = 43/50 (86%)

Query:     3 VHAVHIKTKLCNLIEAMMRRRDDLAFRREMSFRNKLVDYLMDWVLGSANQ 52
             VHA+ IKTKLC L+E MM RRDDL+F +EM FRNK+V+YL DWV+G++NQ
Sbjct:   988 VHAIQIKTKLCQLVEVMMARRDDLSFCQEMKFRNKMVEYLTDWVMGTSNQ 1037

GO:0005096 "GTPase activator activity" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0007165 "signal transduction" evidence=IEA

GO:0051056 "regulation of small GTPase mediated signal transduction" evidence=IEA

UNIPROTKB|J3KSB5 NF1 "Neurofibromin truncated" [Homo sapiens (taxid:9606)]

 Score = 195 (73.7 bits), Expect = 6.7e-14, P = 6.7e-14
 Identities = 34/50 (68%), Positives = 43/50 (86%)

Query:     3 VHAVHIKTKLCNLIEAMMRRRDDLAFRREMSFRNKLVDYLMDWVLGSANQ 52
             VHA+ IKTKLC L+E MM RRDDL+F +EM FRNK+V+YL DWV+G++NQ
Sbjct:  1040 VHAIQIKTKLCQLVEVMMARRDDLSFCQEMKFRNKMVEYLTDWVMGTSNQ 1089

GO:0005096 "GTPase activator activity" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0007165 "signal transduction" evidence=IEA

GO:0051056 "regulation of small GTPase mediated signal transduction" evidence=IEA

ZFIN|ZDB-GENE-091111-4 nf1b "neurofibromin 1b" [Danio rerio (taxid:7955)]

 Score = 196 (74.1 bits), Expect = 9.4e-14, P = 9.4e-14
 Identities = 34/50 (68%), Positives = 43/50 (86%)

Query:     3 VHAVHIKTKLCNLIEAMMRRRDDLAFRREMSFRNKLVDYLMDWVLGSANQ 52
             VHA+ IKTKLC L+E MM RRDDL+F +EM FRNK+V+YL DWV+G++NQ
Sbjct:   921 VHAIQIKTKLCQLVEVMMERRDDLSFCQEMKFRNKMVEYLTDWVMGTSNQ 970

GO:0005622 "intracellular" evidence=IEA

GO:0051056 "regulation of small GTPase mediated signal transduction" evidence=IEA

GO:0005096 "GTPase activator activity" evidence=IEA

GO:0007165 "signal transduction" evidence=IEA

GO:0070444 "oligodendrocyte progenitor proliferation" evidence=IMP

GO:0001568 "blood vessel development" evidence=IGI;IMP

GO:0007507 "heart development" evidence=IMP

UNIPROTKB|Q9YGV2 NF1 "Neurofibromatosis type 1" [Takifugu rubripes (taxid:31033)]

 Score = 196 (74.1 bits), Expect = 9.4e-14, P = 9.4e-14
 Identities = 34/50 (68%), Positives = 43/50 (86%)

Query:     3 VHAVHIKTKLCNLIEAMMRRRDDLAFRREMSFRNKLVDYLMDWVLGSANQ 52
             VHA+ IKTKLC L+E MM RRDDL+F +EM FRNK+V+YL DWV+G++NQ
Sbjct:   937 VHAIQIKTKLCQLVEVMMERRDDLSFCQEMKFRNKMVEYLTDWVMGTSNQ 986

GO:0005099 "Ras GTPase activator activity" evidence=ISS

GO:0005737 "cytoplasm" evidence=ISS

GO:0031235 "intrinsic to internal side of plasma membrane" evidence=ISS

GO:0032320 "positive regulation of Ras GTPase activity" evidence=ISS

GO:0046580 "negative regulation of Ras protein signal transduction" evidence=ISS

UNIPROTKB|H0Y465 NF1 "Neurofibromin truncated" [Homo sapiens (taxid:9606)]

 Score = 195 (73.7 bits), Expect = 1.1e-13, P = 1.1e-13
 Identities = 34/50 (68%), Positives = 43/50 (86%)

Query:     3 VHAVHIKTKLCNLIEAMMRRRDDLAFRREMSFRNKLVDYLMDWVLGSANQ 52
             VHA+ IKTKLC L+E MM RRDDL+F +EM FRNK+V+YL DWV+G++NQ
Sbjct:   672 VHAIQIKTKLCQLVEVMMARRDDLSFCQEMKFRNKMVEYLTDWVMGTSNQ 721

GO:0005096 "GTPase activator activity" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0007165 "signal transduction" evidence=IEA

GO:0051056 "regulation of small GTPase mediated signal transduction" evidence=IEA

UNIPROTKB|J9JHM1 NF1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 195 (73.7 bits), Expect = 1.2e-13, P = 1.2e-13
 Identities = 34/50 (68%), Positives = 43/50 (86%)

Query:     3 VHAVHIKTKLCNLIEAMMRRRDDLAFRREMSFRNKLVDYLMDWVLGSANQ 52
             VHA+ IKTKLC L+E MM RRDDL+F +EM FRNK+V+YL DWV+G++NQ
Sbjct:   941 VHAIQIKTKLCQLVEVMMARRDDLSFCQEMKFRNKMVEYLTDWVMGTSNQ 990

GO:0051056 "regulation of small GTPase mediated signal transduction" evidence=IEA

GO:0007165 "signal transduction" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0005096 "GTPase activator activity" evidence=IEA

UNIPROTKB|I3LV00 NF1 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 195 (73.7 bits), Expect = 1.2e-13, P = 1.2e-13
 Identities = 34/50 (68%), Positives = 43/50 (86%)

Query:     3 VHAVHIKTKLCNLIEAMMRRRDDLAFRREMSFRNKLVDYLMDWVLGSANQ 52
             VHA+ IKTKLC L+E MM RRDDL+F +EM FRNK+V+YL DWV+G++NQ
Sbjct:   981 VHAIQIKTKLCQLVEVMMARRDDLSFCQEMKFRNKMVEYLTDWVMGTSNQ 1030

GO:0051056 "regulation of small GTPase mediated signal transduction" evidence=IEA

GO:0007165 "signal transduction" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0005096 "GTPase activator activity" evidence=IEA

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q04690	NF1_MOUSE	No assigned EC number	0.6666	0.68	0.0179	yes	N/A
P21359	NF1_HUMAN	No assigned EC number	0.6666	0.68	0.0179	yes	N/A
P97526	NF1_RAT	No assigned EC number	0.6666	0.68	0.0180	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	75
KOG1826|consensus	2724		99.57

>KOG1826|consensus

Probab=99.57  E-value=1.3e-15  Score=134.84  Aligned_cols=68  Identities=38%  Similarity=0.561  Sum_probs=61.7

Q ss_pred             CcchhhHHHHHHHHHHHHHHcccccchhhhHHHHHHHHHHHHHHHhcCcCCCCCCCCCCCCchhhhhhhhhhh
Q psy17710          1 MTVHAVHIKTKLCNLIEAMMRRRDDLAFRREMSFRNKLVDYLMDWVLGSANQVTIPPTPGESFVSISRDLLKF   73 (75)
Q Consensus         1 ~t~~slRiKik~CqL~e~vm~rkd~l~~r~e~~~RNkLle~i~eW~~~~s~~~~~~~~~~d~~~rlqrDLD~a   73 (75)
                      |||..+|||+|+|||+|+||.|||+|+|++|++|||+|+||+++|+|+.+...+    .++ ..++-||||||
T Consensus       973 i~V~~irvrskLcqL~Evmi~rredLtf~~em~f~nkl~e~L~d~vmgt~~~aa----l~~-~~~~~rdlDQa 1040 (2724)
T KOG1826|consen  973 ITVKFIRVRSKLCQLAEVMISRREDLTFPLEMGFVNKLFESLYDSVMGTEYLAA----LNF-HERNIRDLDQA 1040 (2724)
T ss_pred             hhhhhhhHHHHHHHHHHHHHhhhhhchhHHHHHHHHHHHHHHHHhhcchhHHHh----hhh-HHHHhhhHHHH
Confidence            689999999999999999999999999999999999999999999999665532    344 88999999998

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00