Psyllid ID: psy17834

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-----
MSIYPRKVILDVDAGIDDAWALLLMLKAEQKNLIEIIAITCCHGNAELSEVVDNVCRVLQAFGRKNIPVYKGVSKPLIPKDLSHKYSFDWLHFFGKNGFGDIDLGDSDTLDRSCHVENISAVVALHELTREFKGLISVLCLAPLTNIALTLRLFPQFAQNAKELYIMGGNHKGVGNVTSAAEFNFLTDPEAAHIVLGGFHGPICILPWEACLGIDISYEWRYDTLGASDAPYISLLNRLERGISDRAISMGFNKWVPADSALCTCFLDEKAITVSYETTCSVELAGEITRGQACVDVVHSKTPNVRMIDTVDSRLLKDMLLWIKD
ccccccEEEEEccccHHHHHHHHHHHHcccccccEEEEEEEccccccHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHccccEEEEEcccHHHHHHHHHHccccHHccccEEEEcccccccccccHHHHccccccHHHHHHHHccccccEEEEccHHHHcccccHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHcccEEEEEEEEEEEEEccccccccEEEEccccccccEEEEccccHHHHHHHHHHccc
ccccccEEEEEccccHHHHHHHHHHHcccccccEEEEEEEEEcccccHHHHHHHHHHHHHHHccccccEccccccccccccccccccHHHHHcccccccccccccccccccccccccHHHHHHHHHHHHHHccccEEEEEccHHHHHHHHHHHccHHHHHHHHHHHHHHHccccccccccccHHHHccHHHHHHHHHcccccEEEEEcccccEEEcccHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHccccccccccccEEEEEEcHHHcccEEEEEEEEEcccccccEEEEEcccccccccEEEEEccHHHHHHHHHHHHc
msiyprkvildVDAGIDDAWALLLMLKAEQKNLIEIIAITCCHGNAELSEVVDNVCRVLQAfgrknipvykgvskplipkdlshkysfdwlhffgkngfgdidlgdsdtldrschveNISAVVALHELTREFKGLISVLCLAPLTNIALTLRLFPQFAQNAKELYIMggnhkgvgnvtsaaefnfltdpeaAHIVLggfhgpicilpweaclgidisyewrydtlgasdapyISLLNRLERGISDraismgfnkwvpadsalctcfldekaitvSYETTCSVELAGEITRGQACVDVVhsktpnvrmiDTVDSRLLKDMLLWIKD
msiyprkvildvdaGIDDAWALLLMLKAEQKNLIEIIAITCCHGNAELSEVVDNVCRVLQAfgrknipvykgvSKPLIPKDLSHKYSFDWLHFFGKNGFGDIDLGDSDTLDRSCHVENISAVVALHELTREFKGLISVLCLAPLTNIALTLRLFPQFAQNAKELYIMGGNHKGVGNVTSAAEFNFLTDPEAAHIVLGGFHGPICILPWEACLGIDISYEWRYDTLGASDAPYISLLNRLERGISDRAISMGFNKWVPADSALCTCFLDEKAITVSYETTCSVELAGEITRGQACVDvvhsktpnvrmidtvdsRLLKDMLLWIKD
MSIYPRKVILDVDAGIDDAWALLLMLKAEQKNLIEIIAITCCHGNAELSEVVDNVCRVLQAFGRKNIPVYKGVSKPLIPKDLSHKYSFDWLHFFGKNGFGDIDLGDSDTLDRSCHVENISAVVALHELTREFKGLISVLCLAPLTNIALTLRLFPQFAQNAKELYIMGGNHKGVGNVTSAAEFNFLTDPEAAHIVLGGFHGPICILPWEACLGIDISYEWRYDTLGASDAPYISLLNRLERGISDRAISMGFNKWVPADSALCTCFLDEKAITVSYETTCSVELAGEITRGQACVDVVHSKTPNVRMIDTVDSRLLKDMLLWIKD
***YPRKVILDVDAGIDDAWALLLMLKAEQKNLIEIIAITCCHGNAELSEVVDNVCRVLQAFGRKNIPVYKGVSKPLIPKDLSHKYSFDWLHFFGKNGFGDIDLGDSDTLDRSCHVENISAVVALHELTREFKGLISVLCLAPLTNIALTLRLFPQFAQNAKELYIMGGNHKGVGNVTSAAEFNFLTDPEAAHIVLGGFHGPICILPWEACLGIDISYEWRYDTLGASDAPYISLLNRLERGISDRAISMGFNKWVPADSALCTCFLDEKAITVSYETTCSVELAGEITRGQACVDVVHSKTPNVRMIDTVDSRLLKDMLLWI**
***YPRK*ILDVDAGIDDAWALLLMLKAEQKNLIEIIAITCCHGNAELSEVVDNVCRVLQAFGRKNIPVYKGVSKPLIPKDLSHKYSFDWLHFFGKNGFGDIDLGDSDTL*****VENISAVVALHELTREFKGLISVLCLAPLTNIALTLRLFPQFAQNAKELYIMGGNHKGVGNVTSAAEFNFLTDPEAAHIVLGGFHGPICILPWEACLGIDISYEWRYDTLGASDAPYISLLNRLERGISDRAISMGFNKWVPADSALCTCFLDEKAITVSYETTCSVELAGEITRGQACVDVVHSKTPNVRMIDTVDSRLLKDMLLWIKD
MSIYPRKVILDVDAGIDDAWALLLMLKAEQKNLIEIIAITCCHGNAELSEVVDNVCRVLQAFGRKNIPVYKGVSKPLIPKDLSHKYSFDWLHFFGKNGFGDIDLGDSDTLDRSCHVENISAVVALHELTREFKGLISVLCLAPLTNIALTLRLFPQFAQNAKELYIMGGNHKGVGNVTSAAEFNFLTDPEAAHIVLGGFHGPICILPWEACLGIDISYEWRYDTLGASDAPYISLLNRLERGISDRAISMGFNKWVPADSALCTCFLDEKAITVSYETTCSVELAGEITRGQACVDVVHSKTPNVRMIDTVDSRLLKDMLLWIKD
****PRKVILDVDAGIDDAWALLLMLKAEQKNLIEIIAITCCHGNAELSEVVDNVCRVLQAFGRKNIPVYKGVSKPLIPKDLSHKYSFDWLHFFGKNGFGDIDLGDSDTLDRSCHVENISAVVALHELTREFKGLISVLCLAPLTNIALTLRLFPQFAQNAKELYIMGGNHKGVGNVTSAAEFNFLTDPEAAHIVLGGFHGPICILPWEACLGIDISYEWRYDTLGASDAPYISLLNRLERGISDRAISMGFNKWVPADSALCTCFLDEKAITVSYETTCSVELAGEITRGQACVDVVHSKTPNVRMIDTVDSRLLKDMLLWIKD
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
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MSIYPRKVILDVDAGIDDAWALLLMLKAEQKNLIEIIAITCCHGNAELSEVVDNVCRVLQAFGRKNIPVYKGVSKPLIPKDLSHKYSFDWLHFFGKNGFGDIDLGDSDTLDRSCHVENISAVVALHELTREFKGLISVLCLAPLTNIALTLRLFPQFAQNAKELYIMGGNHKGVGNVTSAAEFNFLTDPEAAHIVLGGFHGPICILPWEACLGIDISYEWRYDTLGASDAPYISLLNRLERGISDRAISMGFNKWVPADSALCTCFLDEKAITVSYETTCSVELAGEITRGQACVDVVHSKTPNVRMIDTVDSRLLKDMLLWIKD
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query325 2.2.26 [Sep-21-2011]
Q9P6J4310 Uncharacterized protein C yes N/A 0.916 0.961 0.285 7e-26
P83851314 Inosine-uridine preferrin yes N/A 0.846 0.875 0.274 5e-23
Q9SJM7336 Uridine nucleosidase 1 OS yes N/A 0.538 0.520 0.350 1e-22
Q27546315 Inosine-uridine preferrin N/A N/A 0.8 0.825 0.294 2e-22
Q652Q8337 Probable uridine nucleosi no N/A 0.550 0.531 0.350 2e-21
Q6ZJ05324 Probable uridine nucleosi no N/A 0.56 0.561 0.333 4e-21
A6T9S2311 Pyrimidine-specific ribon yes N/A 0.889 0.929 0.278 6e-21
B1KHA5312 Pyrimidine-specific ribon yes N/A 0.818 0.852 0.28 8e-21
A4W829313 Pyrimidine-specific ribon yes N/A 0.886 0.920 0.280 1e-20
Q8LAC4322 Probable uridine nucleosi no N/A 0.550 0.555 0.335 2e-20
>sp|Q9P6J4|YHD6_SCHPO Uncharacterized protein C1683.06c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1683.06c PE=3 SV=1 Back     alignment and function desciption
 Score =  118 bits (295), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 91/319 (28%), Positives = 139/319 (43%), Gaps = 21/319 (6%)

Query: 7   KVILDVDAGIDDAWALLLMLKAEQKNLIEIIAITCCHGNAELSEVVDNVCRVLQAFGRKN 66
           K+I+D D G DDA   LL + + +   IE++ +T   GN  +S    N  ++L   GR +
Sbjct: 2   KIIIDTDPGQDDAITALLAIASPE---IELLGVTTVAGNVPVSMTTRNALQMLDLAGRPD 58

Query: 67  IPVYKGVSKPLIPKDLSHKYSFDWLHFFGKNGFGDIDLGDSDTLDRSCHVENISAVVALH 126
           IPVY G +KPL+      +      H  G +GF    L      +   H  +      + 
Sbjct: 59  IPVYAGSNKPLL------RAPITATHVHGASGFEGAVLPPPSRKENEGHAVDF----IID 108

Query: 127 ELTREFKGLISVLCLAPLTNIALTLRLFPQFAQNAKELYIMGGNHKGVGNVTSAAEFNFL 186
            L     G I++  + PLTNIAL L   P+  Q AK++ +M G    VGN+T AAEFN  
Sbjct: 109 TLRNNEPGTITICTIGPLTNIALALNKAPEVIQRAKQIVMMAGAFSEVGNITPAAEFNIY 168

Query: 187 TDPEAAHIVLGGFHGPICILPWEACLGIDISYEW--RYDTLGASDAPYISLLNRLERGIS 244
            DP AA +VL     PI ++P +    +  S +   R + L     P ++   R+E+   
Sbjct: 169 VDPHAAQMVLSSGI-PIVMMPLDITHQLHTSAKRIARMEALPNRVGPVVAAWLRMEKAYE 227

Query: 245 DRAISMGFNKWVPADSALCTCFLDEKAITVSYETTCSVELAGEITRGQACVD--VVHSKT 302
            +          P        +L    I    +    +E   E+T G + VD   V    
Sbjct: 228 AKKYGTDGG---PLHDPNTVMWLLRPDIYSGRKVNVQIETQSELTMGMSVVDWWQVGLLP 284

Query: 303 PNVRMIDTVDSRLLKDMLL 321
            NV  + TVD     ++L+
Sbjct: 285 ANVTFLRTVDDDEFYEVLI 303

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)
>sp|P83851|IUNH_LEIMA Inosine-uridine preferring nucleoside hydrolase OS=Leishmania major GN=NSNH PE=1 SV=3 Back     alignment and function description
>sp|Q9SJM7|URH1_ARATH Uridine nucleosidase 1 OS=Arabidopsis thaliana GN=URH1 PE=1 SV=2 Back     alignment and function description
>sp|Q27546|IUNH_CRIFA Inosine-uridine preferring nucleoside hydrolase OS=Crithidia fasciculata GN=IUNH PE=1 SV=3 Back     alignment and function description
>sp|Q652Q8|URH2_ORYSJ Probable uridine nucleosidase 2 OS=Oryza sativa subsp. japonica GN=URH2 PE=2 SV=1 Back     alignment and function description
>sp|Q6ZJ05|URH1_ORYSJ Probable uridine nucleosidase 1 OS=Oryza sativa subsp. japonica GN=URH1 PE=2 SV=1 Back     alignment and function description
>sp|A6T9S2|RIHA_KLEP7 Pyrimidine-specific ribonucleoside hydrolase RihA OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=rihA PE=3 SV=1 Back     alignment and function description
>sp|B1KHA5|RIHA_SHEWM Pyrimidine-specific ribonucleoside hydrolase RihA OS=Shewanella woodyi (strain ATCC 51908 / MS32) GN=rihA PE=3 SV=1 Back     alignment and function description
>sp|A4W829|RIHA_ENT38 Pyrimidine-specific ribonucleoside hydrolase RihA OS=Enterobacter sp. (strain 638) GN=rihA PE=3 SV=1 Back     alignment and function description
>sp|Q8LAC4|URH2_ARATH Probable uridine nucleosidase 2 OS=Arabidopsis thaliana GN=URH2 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query325
312379291317 hypothetical protein AND_08912 [Anophele 0.950 0.974 0.414 3e-62
332026098329 Inosine-uridine preferring nucleoside hy 0.950 0.939 0.417 3e-62
91082351309 PREDICTED: similar to inosine-uridine pr 0.916 0.964 0.434 5e-61
158300994332 AGAP011729-PA [Anopheles gambiae str. PE 0.929 0.909 0.416 1e-60
307191438332 Uncharacterized protein C1683.06c [Campo 0.953 0.933 0.391 2e-59
321454165327 hypothetical protein DAPPUDRAFT_333266 [ 0.941 0.935 0.414 5e-58
312373009 788 hypothetical protein AND_19206 [Anophele 0.947 0.390 0.390 1e-56
157167469365 inosine-uridine preferring nucleoside hy 0.926 0.824 0.394 3e-56
383862955322 PREDICTED: pyrimidine-specific ribonucle 0.944 0.953 0.402 3e-55
158302423347 AGAP001183-PA [Anopheles gambiae str. PE 0.941 0.881 0.376 4e-55
>gi|312379291|gb|EFR25614.1| hypothetical protein AND_08912 [Anopheles darlingi] Back     alignment and taxonomy information
 Score =  245 bits (625), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 134/323 (41%), Positives = 192/323 (59%), Gaps = 14/323 (4%)

Query: 3   IYPRKVILDVDAGIDDAWALLLMLKAEQKNLIEIIAITCCHGNAELSEVVDNVCRVLQAF 62
           + PRKV++D+DAG DDAWALL++LKAEQ+  ++++AITC HGN ++  V  NV R+L A 
Sbjct: 1   MSPRKVVIDLDAGTDDAWALLMLLKAEQQYNLQVVAITCVHGNTDVDNVTTNVLRILTAI 60

Query: 63  GRKNIPVYKGVSKPLIPKDLSHKYSFDWLHFFGKNGFGDIDLGDSDTLDRSCHVENISAV 122
            R ++PVY+G S+ LI      K       F G NGFGDI+  +   +DRS  +    AV
Sbjct: 61  DRTDVPVYRGASEALIT---PRKRKSPEECFHGMNGFGDIEF-EQPQIDRSM-IRGEHAV 115

Query: 123 VALHELTREFKGLISVLCLAPLTNIALTLRLFPQFAQNAKELYIMGGNHKGVGNVTSAAE 182
           +ALH L  +  G ++V+C+ PLTN+AL L+L+P+      EL+IMGGN  GVGNVT +AE
Sbjct: 116 LALHRLLVQHPGQLAVICVGPLTNLALCLKLYPEVGTLLGELHIMGGNRLGVGNVTRSAE 175

Query: 183 FNFLTDPEAAHIVLGGFHGPICILPWEAC--LGIDISYEWRYDTLG--ASDAPYISLLNR 238
           FNF TD EAA IVL     P+ +LPWE C      +  +WR + LG  AS    + +LN 
Sbjct: 176 FNFYTDVEAAQIVLEKVRCPVTLLPWETCQTQARALPIDWRMEQLGQQASSNRAVQMLNE 235

Query: 239 LERGISDRAISMGFNKWVPADSALCTCFLDEKAITVSYETTCSVELAGEITRGQACVDVV 298
           +ER +  +     +  W+P D+ L   F+    I  S      +EL G +TRGQ  +D +
Sbjct: 236 IERKVYRK-----WTCWMPCDAFLVAAFIRPDIIERSERFHVDIELHGTLTRGQMVLDHL 290

Query: 299 HSKTPNVRMIDTVDSRLLKDMLL 321
            S   NVR++D ++    + + L
Sbjct: 291 QSFQENVRIVDKLNDDEFRQLCL 313

Source: Anopheles darlingi

Species: Anopheles darlingi

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota
>gi|332026098|gb|EGI66246.1| Inosine-uridine preferring nucleoside hydrolase [Acromyrmex echinatior] Back     alignment and taxonomy information
>gi|91082351|ref|XP_967256.1| PREDICTED: similar to inosine-uridine preferring nucleoside hydrolase [Tribolium castaneum] gi|270007493|gb|EFA03941.1| hypothetical protein TcasGA2_TC014082 [Tribolium castaneum] Back     alignment and taxonomy information
>gi|158300994|ref|XP_320780.3| AGAP011729-PA [Anopheles gambiae str. PEST] gi|157013427|gb|EAA00053.3| AGAP011729-PA [Anopheles gambiae str. PEST] Back     alignment and taxonomy information
>gi|307191438|gb|EFN74979.1| Uncharacterized protein C1683.06c [Camponotus floridanus] Back     alignment and taxonomy information
>gi|321454165|gb|EFX65347.1| hypothetical protein DAPPUDRAFT_333266 [Daphnia pulex] Back     alignment and taxonomy information
>gi|312373009|gb|EFR20841.1| hypothetical protein AND_19206 [Anopheles darlingi] Back     alignment and taxonomy information
>gi|157167469|ref|XP_001654811.1| inosine-uridine preferring nucleoside hydrolase [Aedes aegypti] gi|108882436|gb|EAT46661.1| AAEL002176-PA, partial [Aedes aegypti] Back     alignment and taxonomy information
>gi|383862955|ref|XP_003706948.1| PREDICTED: pyrimidine-specific ribonucleoside hydrolase rihA-like [Megachile rotundata] Back     alignment and taxonomy information
>gi|158302423|ref|XP_321974.4| AGAP001183-PA [Anopheles gambiae str. PEST] gi|157012945|gb|EAA01060.4| AGAP001183-PA [Anopheles gambiae str. PEST] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query325
ZFIN|ZDB-GENE-030131-9599323 si:dkey-98p3.7 "si:dkey-98p3.7 0.923 0.928 0.354 4.3e-38
POMBASE|SPBC1683.06c310 SPBC1683.06c "uridine ribohydr 0.913 0.958 0.293 1.8e-25
TIGR_CMR|SPO_2470313 SPO_2470 "inosine-uridine pref 0.916 0.952 0.294 5.9e-25
TAIR|locus:2049435336 URH1 "uridine-ribohydrolase 1" 0.541 0.523 0.359 3.8e-23
TAIR|locus:2032008322 URH2 "uridine-ribohydrolase 2" 0.547 0.552 0.336 3e-21
UNIPROTKB|P41409311 rihA [Escherichia coli K-12 (t 0.901 0.942 0.291 3.9e-21
CGD|CAL0001797330 orf19.1888 [Candida albicans ( 0.593 0.584 0.330 8e-21
UNIPROTKB|P33022313 rihB "ribonucleoside hydrolase 0.535 0.555 0.336 4e-19
TIGR_CMR|SO_0811318 SO_0811 "inosine-uridine prefe 0.581 0.594 0.352 4.9e-18
POMBASE|SPAC17G8.02330 SPAC17G8.02 "uridine ribohydro 0.529 0.521 0.326 8.7e-17
ZFIN|ZDB-GENE-030131-9599 si:dkey-98p3.7 "si:dkey-98p3.7" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
 Score = 408 (148.7 bits), Expect = 4.3e-38, P = 4.3e-38
 Identities = 115/324 (35%), Positives = 171/324 (52%)

Query:     8 VILDVDAGIDDAWALLLMLKAEQKNLIEIIAITCCHGNAELSEVVDNVCRVLQAFGRKNI 67
             +I+D D GIDDA A+++ L A     ++++ ITCC GN  +  V  NV RVL    +  I
Sbjct:     6 LIIDTDCGIDDALAIIVALAAPN---VKVLGITCCFGNTNVDNVCMNVMRVLTVCQQTQI 62

Query:    68 PVYKGVSKPLIPKDLSHKYSFDWLHFFGKNGFGDIDLGDSDTLDRSCHVENISAVVALHE 127
             PV+KG + PL+  +L  K   D  HF G +G G + L +S+   +    E+  AV A+  
Sbjct:    63 PVFKGSAGPLLGPELPLK---D--HF-GTDGLGGV-LENSEEWKQQIQKEH--AVHAILR 113

Query:   128 LTREFKGLISVLCLAPLTNIALTLRLFPQFAQNAKELYIMGGNHKGVGNVTSAAEFNFLT 187
             L  E  G +S++ L PLTN+AL +RL P   Q  K+LY+MGGN +G GN+T ++EFNF  
Sbjct:   114 LVNENPGQVSLIALGPLTNLALAVRLDPGLPQKLKDLYVMGGNMEGKGNMTPSSEFNFRM 173

Query:   188 DPEAAHIVLGGFHGPICILPWEACLGIDISYEWRYDTLG--ASDAPYISLLNR----LER 241
             D E+A++VL  +  P  I  WE      +S+E+  + +    S A +I  +        R
Sbjct:   174 DAESAYVVLEEYTCPTHIATWEFTCRNKLSWEYFEELVNQKTSVAQFIKKITSKCWAYSR 233

Query:   242 GI-SDRAISMGFNK-WVPADS-ALCTCFLDEKAITVSYETTCSVELAGEITRGQACVDVV 298
                S     + F K +VP D+ A+  C LD   IT S      VE+ GE+ RG   VD  
Sbjct:   234 DFNSSNNKDVLFGKGFVPYDAFAVAAC-LDSSVITESLRCAVRVEVRGELGRGMMIVDAA 292

Query:   299 HS-KTPNVRMI-DTVDSRLLKDML 320
             ++ K  ++  +  T D +    ML
Sbjct:   293 NTLKKGHLAFVMKTCDLKKFSSML 316
GO:0005575 "cellular_component" evidence=ND
GO:0016787 "hydrolase activity" evidence=IEA
POMBASE|SPBC1683.06c SPBC1683.06c "uridine ribohydrolase (predicted)" [Schizosaccharomyces pombe (taxid:4896)] Back     alignment and assigned GO terms
TIGR_CMR|SPO_2470 SPO_2470 "inosine-uridine preferring nucleoside hydrolase" [Ruegeria pomeroyi DSS-3 (taxid:246200)] Back     alignment and assigned GO terms
TAIR|locus:2049435 URH1 "uridine-ribohydrolase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2032008 URH2 "uridine-ribohydrolase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|P41409 rihA [Escherichia coli K-12 (taxid:83333)] Back     alignment and assigned GO terms
CGD|CAL0001797 orf19.1888 [Candida albicans (taxid:5476)] Back     alignment and assigned GO terms
UNIPROTKB|P33022 rihB "ribonucleoside hydrolase 2 (pyrimidine-specific)" [Escherichia coli K-12 (taxid:83333)] Back     alignment and assigned GO terms
TIGR_CMR|SO_0811 SO_0811 "inosine-uridine preferring nucleoside hydrolase family protein" [Shewanella oneidensis MR-1 (taxid:211586)] Back     alignment and assigned GO terms
POMBASE|SPAC17G8.02 SPAC17G8.02 "uridine ribohydrolase (predicted)" [Schizosaccharomyces pombe (taxid:4896)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
B1IYF7RIHA_ECOLC3, ., 2, ., -, ., -0.27740.87380.9131yesN/A
B7L9J7RIHA_ECO553, ., 2, ., -, ., -0.27430.87380.9131yesN/A
A4W829RIHA_ENT383, ., 2, ., -, ., -0.28080.88610.9201yesN/A
B7LKV4RIHA_ESCF33, ., 2, ., -, ., -0.27740.87380.9131yesN/A
A7ZXS0RIHA_ECOHS3, ., 2, ., -, ., -0.27740.87380.9131yesN/A
Q83LY1RIHA_SHIFL3, ., 2, ., -, ., -0.27740.87380.9131yesN/A
C0PW90RIHA_SALPC3, ., 2, ., -, ., -0.28390.88610.9260yesN/A
B7UKT4RIHA_ECO273, ., 2, ., -, ., -0.27430.87380.9131yesN/A
B5FNA2RIHA_SALDC3, ., 2, ., -, ., -0.28350.87380.9131yesN/A
B7N9Q7RIHA_ECOLU3, ., 2, ., -, ., -0.27430.87380.9131yesN/A
Q0T6R1RIHA_SHIF83, ., 2, ., -, ., -0.27740.87380.9131yesN/A
B1KHA5RIHA_SHEWM3, ., 2, ., -, ., -0.280.81840.8525yesN/A
Q9P6J4YHD6_SCHPONo assigned EC number0.28520.91690.9612yesN/A
B5YQK2RIHA_ECO5E3, ., 2, ., -, ., -0.27430.87380.9131yesN/A
P83851IUNH_LEIMA3, ., 2, ., 2, ., -0.27470.84610.8757yesN/A
B4TB65RIHA_SALHS3, ., 2, ., -, ., -0.28040.87380.9131yesN/A
Q3Z4E1RIHA_SHISS3, ., 2, ., -, ., -0.27130.87380.9131yesN/A
Q5PM78RIHA_SALPA3, ., 2, ., -, ., -0.28040.87380.9131yesN/A
A7ZJ42RIHA_ECO243, ., 2, ., -, ., -0.27430.87380.9131yesN/A
A9MUJ0RIHA_SALPB3, ., 2, ., -, ., -0.28080.88610.9260yesN/A
B2TU69RIHA_SHIB33, ., 2, ., -, ., -0.27430.87380.9131yesN/A
B5R809RIHA_SALG23, ., 2, ., -, ., -0.28350.87380.9131yesN/A
B7NM03RIHA_ECO7I3, ., 2, ., -, ., -0.27740.87380.9131yesN/A
A1A8R9RIHA_ECOK13, ., 2, ., -, ., -0.27430.87380.9131yesN/A
Q8ZQY4RIHA_SALTY3, ., 2, ., -, ., -0.28040.87380.9131yesN/A
B5XWV7RIHA_KLEP33, ., 2, ., -, ., -0.27240.88920.9292yesN/A
B5QVR2RIHA_SALEP3, ., 2, ., -, ., -0.28040.87380.9131yesN/A
A8AJF8RIHA_CITK83, ., 2, ., -, ., -0.28260.89230.9294yesN/A
Q57RR6RIHA_SALCH3, ., 2, ., -, ., -0.28390.88610.9260yesN/A
C4ZWD8RIHA_ECOBW3, ., 2, ., -, ., -0.27740.87380.9131yesN/A
B7MFR7RIHA_ECO453, ., 2, ., -, ., -0.27430.87380.9131yesN/A
A6T9S2RIHA_KLEP73, ., 2, ., -, ., -0.27860.88920.9292yesN/A
B4TPY1RIHA_SALSV3, ., 2, ., -, ., -0.28350.87380.9131yesN/A
Q324P5RIHA_SHIBS3, ., 2, ., -, ., -0.27430.87380.9131yesN/A
B5BCD9RIHA_SALPK3, ., 2, ., -, ., -0.28040.87380.9131yesN/A
Q8FJY8RIHA_ECOL63, ., 2, ., -, ., -0.27430.87380.9131yesN/A
B7M5H8RIHA_ECO8A3, ., 2, ., -, ., -0.27130.87380.9131yesN/A
B5EZA2RIHA_SALA43, ., 2, ., -, ., -0.28350.87380.9131yesN/A
B6I163RIHA_ECOSE3, ., 2, ., -, ., -0.27430.87380.9131yesN/A

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query325
cd02649306 cd02649, nuc_hydro_CeIAG, nuc_hydro_CeIAG: Nucleos 1e-107
pfam01156304 pfam01156, IU_nuc_hydro, Inosine-uridine preferrin 1e-76
COG1957311 COG1957, URH1, Inosine-uridine nucleoside N-ribohy 9e-61
cd02651302 cd02651, nuc_hydro_IU_UC_XIUA, nuc_hydro_IU_UC_XIU 3e-53
cd00455295 cd00455, nuc_hydro, nuc_hydro: Nucleoside hydrolas 5e-53
cd02650304 cd02650, nuc_hydro_CaPnhB, NH_hydro_CaPnhB: A subg 1e-42
PLN02717316 PLN02717, PLN02717, uridine nucleosidase 5e-40
cd02653320 cd02653, nuc_hydro_3, NH_3: A subgroup of nucleosi 4e-33
PRK10768304 PRK10768, PRK10768, ribonucleoside hydrolase RihC; 9e-31
cd02654318 cd02654, nuc_hydro_CjNH, nuc_hydro_CjNH 5e-30
PRK10443311 PRK10443, rihA, ribonucleoside hydrolase 1; Provis 5e-28
PRK09955313 PRK09955, rihB, ribonucleoside hydrolase 2; Provis 7e-22
cd02648367 cd02648, nuc_hydro_1, NH_1: A subgroup of nucleosi 3e-19
cd02647312 cd02647, nuc_hydro_TvIAG, nuc_hydro_ TvIAG: Nucleo 6e-17
cd02652293 cd02652, nuc_hydro_2, NH_2: A subgroup of nucleosi 2e-11
PTZ00313326 PTZ00313, PTZ00313, inosine-adenosine-guanosine-nu 1e-05
>gnl|CDD|239115 cd02649, nuc_hydro_CeIAG, nuc_hydro_CeIAG: Nucleoside hydrolases similar to the inosine-adenosine-guanosine-preferring nucleoside hydrolase from Caenorhabditis elegans Back     alignment and domain information 
 Score =  313 bits (805), Expect = e-107
 Identities = 134/318 (42%), Positives = 177/318 (55%), Gaps = 16/318 (5%)

Query: 6   RKVILDVDAGIDDAWALLLMLKAEQKNLIEIIAITCCHGNAELSEVVDNVCRVLQAFGRK 65
           RK+I+D D G DDAWALL+ L +     +E++AITC HGN  + +VV N  RVL+A GR+
Sbjct: 1   RKLIIDTDCGGDDAWALLMALASPN---VEVLAITCVHGNTNVEQVVKNALRVLEACGRR 57

Query: 66  NIPVYKGVSKPLIPKDLSHKYSFDWLHFFGKNGFGDIDLGDSDTLDRSCHVENISAVVAL 125
           +IPVY+G SKPL+             +F GK+GFGD+   +         ++   AV A+
Sbjct: 58  DIPVYRGASKPLLGP------GPTAAYFHGKDGFGDVGFPEPKDELE---LQKEHAVDAI 108

Query: 126 HELTREFKGLISVLCLAPLTNIALTLRLFPQFAQNAKELYIMGGNHKGVGNVTSAAEFNF 185
             L RE+ G I+++ L PLTN+AL  RL P   Q  K LYIMGGN +GVGN T AAEFNF
Sbjct: 109 IRLVREYPGEITLVALGPLTNLALAYRLDPSLPQKIKRLYIMGGNREGVGNTTPAAEFNF 168

Query: 186 LTDPEAAHIVLGGFHGPICILPWEACLGIDISYEWRYDTLGASDAPYISLLNRL-ERGIS 244
             DPEAAHIVL  F  PI I+PWE  L +    +W ++   A+          L  R  +
Sbjct: 169 HVDPEAAHIVLNSFGCPITIVPWETTL-LAFPLDWEFEDKWANRLEKALFAESLNRREYA 227

Query: 245 DRAISMGFNKWVPADSALCTCFLDEKAITVSYETTCSVELAGEITRGQACVDV--VHSKT 302
             +  +G + WVP D+      LD   IT        VEL GE+TRGQ  VD      K 
Sbjct: 228 FASEGLGGDGWVPCDALAVAAALDPSIITRRLTYAVDVELHGELTRGQMVVDWLGTLKKK 287

Query: 303 PNVRMIDTVDSRLLKDML 320
           PN R+I  +D    K++L
Sbjct: 288 PNARVITKIDREKFKELL 305

Nucleoside hydrolases cleave the N-glycosidic bond in nucleosides generating ribose and the respective base. These enzymes vary in their substrate specificity. This group contains eukaryotic, bacterial and archeal proteins similar to the purine-preferring nucleoside hydrolase (IAG-NH) from C. elegans and the salivary purine nucleosidase from Aedes aegypti. C. elegans IAG-NH exhibits a high affinity for the substrate analogue p-nitrophenylriboside (p-NPR). . Length = 306
>gnl|CDD|216336 pfam01156, IU_nuc_hydro, Inosine-uridine preferring nucleoside hydrolase Back     alignment and domain information
>gnl|CDD|224868 COG1957, URH1, Inosine-uridine nucleoside N-ribohydrolase [Nucleotide transport and metabolism] Back     alignment and domain information
>gnl|CDD|239117 cd02651, nuc_hydro_IU_UC_XIUA, nuc_hydro_IU_UC_XIUA: inosine-uridine preferring, xanthosine-inosine-uridine-adenosine-preferring and, uridine-cytidine preferring nucleoside hydrolases Back     alignment and domain information
>gnl|CDD|238257 cd00455, nuc_hydro, nuc_hydro: Nucleoside hydrolases Back     alignment and domain information
>gnl|CDD|239116 cd02650, nuc_hydro_CaPnhB, NH_hydro_CaPnhB: A subgroup of nucleoside hydrolases similar to Corynebacterium ammoniagenes Purine/pyrimidine nucleoside hydrolase (pnhB) Back     alignment and domain information
>gnl|CDD|178319 PLN02717, PLN02717, uridine nucleosidase Back     alignment and domain information
>gnl|CDD|239119 cd02653, nuc_hydro_3, NH_3: A subgroup of nucleoside hydrolases Back     alignment and domain information
>gnl|CDD|182713 PRK10768, PRK10768, ribonucleoside hydrolase RihC; Provisional Back     alignment and domain information
>gnl|CDD|239120 cd02654, nuc_hydro_CjNH, nuc_hydro_CjNH Back     alignment and domain information
>gnl|CDD|182465 PRK10443, rihA, ribonucleoside hydrolase 1; Provisional Back     alignment and domain information
>gnl|CDD|182166 PRK09955, rihB, ribonucleoside hydrolase 2; Provisional Back     alignment and domain information
>gnl|CDD|239114 cd02648, nuc_hydro_1, NH_1: A subgroup of nucleoside hydrolases Back     alignment and domain information
>gnl|CDD|239113 cd02647, nuc_hydro_TvIAG, nuc_hydro_ TvIAG: Nucleoside hydrolases similar to the Inosine-adenosine-guanosine-preferring nucleoside hydrolase from Trypanosoma vivax Back     alignment and domain information
>gnl|CDD|239118 cd02652, nuc_hydro_2, NH_2: A subgroup of nucleoside hydrolases Back     alignment and domain information
>gnl|CDD|140334 PTZ00313, PTZ00313, inosine-adenosine-guanosine-nucleoside hydrolase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 325
COG1957311 URH1 Inosine-uridine nucleoside N-ribohydrolase [N 100.0
PRK09955313 rihB ribonucleoside hydrolase 2; Provisional 100.0
PLN02717316 uridine nucleosidase 100.0
cd02649306 nuc_hydro_CeIAG nuc_hydro_CeIAG: Nucleoside hydrol 100.0
PRK10768304 ribonucleoside hydrolase RihC; Provisional 100.0
cd02651302 nuc_hydro_IU_UC_XIUA nuc_hydro_IU_UC_XIUA: inosine 100.0
PRK10443311 rihA ribonucleoside hydrolase 1; Provisional 100.0
cd02653320 nuc_hydro_3 NH_3: A subgroup of nucleoside hydrola 100.0
PTZ00313326 inosine-adenosine-guanosine-nucleoside hydrolase; 100.0
cd02650304 nuc_hydro_CaPnhB NH_hydro_CaPnhB: A subgroup of nu 100.0
cd02654318 nuc_hydro_CjNH nuc_hydro_CjNH. Nucleoside hydrolas 100.0
PF01156312 IU_nuc_hydro: Inosine-uridine preferring nucleosid 100.0
cd00455295 nuc_hydro nuc_hydro: Nucleoside hydrolases. Nucleo 100.0
cd02647312 nuc_hydro_TvIAG nuc_hydro_ TvIAG: Nucleoside hydro 100.0
cd02648367 nuc_hydro_1 NH_1: A subgroup of nucleoside hydrola 100.0
KOG2938|consensus350 100.0
cd02652293 nuc_hydro_2 NH_2: A subgroup of nucleoside hydrola 100.0
PF07632260 DUF1593: Protein of unknown function (DUF1593); In 97.7
>COG1957 URH1 Inosine-uridine nucleoside N-ribohydrolase [Nucleotide transport and metabolism] Back     alignment and domain information 
Probab=100.00  E-value=1.5e-80  Score=571.60  Aligned_cols=302  Identities=34%  Similarity=0.495  Sum_probs=265.6

Q ss_pred             CCceEEEeCCCCchHHHHHHHHHhCCCCCceEEEEEEeecCCCCHHHHHHHHHHHHHHhCCCCCCcccCCCCCCCCCCcc
Q psy17834          4 YPRKVILDVDAGIDDAWALLLMLKAEQKNLIEIIAITCCHGNAELSEVVDNVCRVLQAFGRKNIPVYKGVSKPLIPKDLS   83 (325)
Q Consensus         4 ~~~kvIiDtD~G~DDa~Al~~al~~~~~~~i~l~gVt~v~Gn~~~~~~~~n~~~~l~~~g~~~IPV~~G~~~pl~~~~~~   83 (325)
                      +++|||||||+|+||++||+|||++|+   +||+|||+|+||++++++++|++.+|+.+|+.+||||+|+.+||.++...
T Consensus         1 ~~~kiiiD~DpG~DDaiAlllal~~p~---i~l~giTtv~GNv~le~t~~Na~~~l~~~g~~~iPV~~Ga~~Pl~r~~~~   77 (311)
T COG1957           1 MMRKIIIDCDPGHDDAIALLLALASPE---IDLLGITTVAGNVPLEQTTRNALSVLELLGRADIPVYAGAARPLLREPIT   77 (311)
T ss_pred             CCceEEEeCCCChhHHHHHHHHhcCCC---ceEEEEEEecCcccHhHHHHHHHHHHHHcCCCCCCeecCCCCCcCCCCcc
Confidence            468999999999999999999999998   99999999999999999999999999999999999999999999987654


Q ss_pred             CccccccccccCCCCCCCCCCCCCCCcccccCCCCCcHHHHHHHHHHhCCCcEEEEEccchHHHHHHHHHCcchhhccCc
Q psy17834         84 HKYSFDWLHFFGKNGFGDIDLGDSDTLDRSCHVENISAVVALHELTREFKGLISVLCLAPLTNIALTLRLFPQFAQNAKE  163 (325)
Q Consensus        84 ~~~a~~~~~~hG~dglg~~~~~~p~~~~~~~~~~~~~a~~~l~~~~~~~~~~vtiv~iGpLTNiA~al~~~P~~~~~i~~  163 (325)
                         +   +.+||.+||++..+  | .|.. ..+.. +|+++|+|+++++|++||||++|||||||+|++++|+++++||+
T Consensus        78 ---a---~~iHG~~Gl~~~~l--p-~~~~-~~~~~-~A~~~ii~~l~~~~g~vtlva~GPLTNiAlAl~~~P~i~~~ik~  146 (311)
T COG1957          78 ---A---PEIHGESGLGGPEL--P-EPTR-KLESK-HAVDAIIDTLMANPGEVTLVATGPLTNIALALRKDPEIAKRIKE  146 (311)
T ss_pred             ---h---hhhcCCcCCCCCCC--C-cccc-cccCC-cHHHHHHHHHHhCCCcEEEEecCChHHHHHHHHhCcchhhhhcE
Confidence               2   78999999999855  5 3333 34454 99999999999999999999999999999999999999999999


Q ss_pred             EEEecCcccCCCCCCccccccCCCCHHHHHHHHhcCCCCeEEecCCccccccCChHHHHHHhCCCChHHHHHHHHHHH--
Q psy17834        164 LYIMGGNHKGVGNVTSAAEFNFLTDPEAAHIVLGGFHGPICILPWEACLGIDISYEWRYDTLGASDAPYISLLNRLER--  241 (325)
Q Consensus       164 iviMGG~~~~~GN~~~~aE~N~~~DPeAA~~Vl~s~g~~i~~vpld~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  241 (325)
                      ||||||++..+||++|.||||+|+|||||++||+| |.|++|+|||+|++...+.+. ++.+.+.+++..+++.++++  
T Consensus       147 iviMGGa~~~~GNvtp~AEfNi~~DPeAA~iVf~s-g~~i~mv~LdvT~q~~~t~~~-~~~~~~~~~~~~~~~~d~l~~~  224 (311)
T COG1957         147 IVIMGGAFFVPGNVTPAAEFNIWVDPEAAKIVFTS-GWPITMVPLDVTHQVLLTPDV-LARLRAAGGPAAELVADLLDFY  224 (311)
T ss_pred             EEEecCccCCCCCcCcchhhhhccCHHHHHHHHhC-CCceEEechhhhhhhcCCHHH-HHHHHHhCCccHHHHHHHHHHH
Confidence            99999999989999999999999999999999997 999999999999988866543 34555445544444444333  


Q ss_pred             -HHhhhhhhcCCCCCCCCcHHHHHHHhcCCceeeEEEeeEEEEeeCCcccceEEEecCC--CCCCCeEEEeccCHHHHHH
Q psy17834        242 -GISDRAISMGFNKWVPADSALCTCFLDEKAITVSYETTCSVELAGEITRGQACVDVVH--SKTPNVRMIDTVDSRLLKD  318 (325)
Q Consensus       242 -~~~~~~~~~~~~~~~~~D~la~a~~~~P~~~~~~~~~~v~V~~~g~~~~G~tv~d~~~--~~~~~v~v~~~vd~~~f~~  318 (325)
                       .+|.  ..+|.+|.++||++|++|+++|++++ ++++.|+||++|++|+|+|++|+..  ++++|++|+..+|.++|++
T Consensus       225 ~~~~~--~~~g~~g~~~hD~~a~a~l~~p~l~~-~~~~~V~Ve~~~~lt~G~Tv~d~~~~~~~~~n~~v~~~vD~~~f~~  301 (311)
T COG1957         225 LAYYK--SRQGLDGAPLHDPLAVAYLLDPELFT-TREANVDVETAGGLTRGMTVVDWRGVLGKPPNAQVAVDVDVEGFLD  301 (311)
T ss_pred             HHHHh--hccCCCCCCcccHHHHHHHhChhhhc-ceEEEEEEEeCCCCcCcceEEEecccCCCCCCeEEeeccCHHHHHH
Confidence             2343  24466888999999999999999986 7899999999999999999999984  4569999999999999999


Q ss_pred             HHhhhh
Q psy17834        319 MLLWIK  324 (325)
Q Consensus       319 ~l~~~~  324 (325)
                      ++.+++
T Consensus       302 ~i~~~l  307 (311)
T COG1957         302 LILEAL  307 (311)
T ss_pred             HHHHHH
Confidence            999875

>PRK09955 rihB ribonucleoside hydrolase 2; Provisional Back     alignment and domain information
>PLN02717 uridine nucleosidase Back     alignment and domain information
>cd02649 nuc_hydro_CeIAG nuc_hydro_CeIAG: Nucleoside hydrolases similar to the inosine-adenosine-guanosine-preferring nucleoside hydrolase from Caenorhabditis elegans Back     alignment and domain information
>PRK10768 ribonucleoside hydrolase RihC; Provisional Back     alignment and domain information
>cd02651 nuc_hydro_IU_UC_XIUA nuc_hydro_IU_UC_XIUA: inosine-uridine preferring, xanthosine-inosine-uridine-adenosine-preferring and, uridine-cytidine preferring nucleoside hydrolases Back     alignment and domain information
>PRK10443 rihA ribonucleoside hydrolase 1; Provisional Back     alignment and domain information
>cd02653 nuc_hydro_3 NH_3: A subgroup of nucleoside hydrolases Back     alignment and domain information
>PTZ00313 inosine-adenosine-guanosine-nucleoside hydrolase; Provisional Back     alignment and domain information
>cd02650 nuc_hydro_CaPnhB NH_hydro_CaPnhB: A subgroup of nucleoside hydrolases similar to Corynebacterium ammoniagenes Purine/pyrimidine nucleoside hydrolase (pnhB) Back     alignment and domain information
>cd02654 nuc_hydro_CjNH nuc_hydro_CjNH Back     alignment and domain information
>PF01156 IU_nuc_hydro: Inosine-uridine preferring nucleoside hydrolase; InterPro: IPR001910 Inosine-uridine preferring nucleoside hydrolase (3 Back     alignment and domain information
>cd00455 nuc_hydro nuc_hydro: Nucleoside hydrolases Back     alignment and domain information
>cd02647 nuc_hydro_TvIAG nuc_hydro_ TvIAG: Nucleoside hydrolases similar to the Inosine-adenosine-guanosine-preferring nucleoside hydrolase from Trypanosoma vivax Back     alignment and domain information
>cd02648 nuc_hydro_1 NH_1: A subgroup of nucleoside hydrolases Back     alignment and domain information
>KOG2938|consensus Back     alignment and domain information
>cd02652 nuc_hydro_2 NH_2: A subgroup of nucleoside hydrolases Back     alignment and domain information
>PF07632 DUF1593: Protein of unknown function (DUF1593); InterPro: IPR011483 This is a family of proteins found in Rhodopirellula baltica that are predicted to be secreted Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query325
3t8i_A306 Structural Analysis Of Thermostable S. Solfataricus 2e-28
3t8j_A311 Structural Analysis Of Thermostable S. Solfataricus 2e-26
1ezr_A314 Crystal Structure Of Nucleoside Hydrolase From Leis 1e-23
1mas_A314 Purine Nucleoside Hydrolase Length = 314 1e-22
1yoe_A322 Crystal Structure Of A The E. Coli Pyrimidine Nucle 7e-21
3g5i_A312 Crystal Structure Of The E.Coli Riha Pyrimidine Nuc 7e-21
3b9x_A333 Crystal Structure Of The E. Coli Pyrimidine Nucleos 1e-19
1q8f_A313 Crystal Structure Of The E.Coli Pyrimidine Nucleosi 1e-19
3mkm_A316 Crystal Structure Of The E. Coli Pyrimidine Nucleos 1e-19
3fz0_A360 Inosine-Guanosine Nucleoside Hydrolase (Ig-Nh) Leng 1e-18
2c40_A312 Crystal Structure Of Inosine-Uridine Preferring Nuc 2e-08
>pdb|3T8I|A Chain A, Structural Analysis Of Thermostable S. Solfataricus Purine-Specific Nucleoside Hydrolase Length = 306 Back     alignment and structure 
Iteration: 1

 Score =  122 bits (306), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 98/328 (29%), Positives = 154/328 (46%), Gaps = 40/328 (12%)
Query: 6   RKVILDVDAGIDDAWALLLMLKAEQKNLIEIIAITCCHGNAELSEVVDNVCRVLQAFGRK 65
           RKVI+D D   DD  A+LL  +       +++ +T   GN   ++ V N    L+  G++
Sbjct: 2   RKVIVDSDTATDDTIAILLASR-----FFQLLGVTIVAGNVNYNQEVKNALFTLEYIGKQ 56
Query: 66  NIPVYKGVSKPLIPKDLSHKYSFDWLHFFGKNGFGDIDLGDSDTLDRSCHVENISAVVAL 125
           ++PVY G  +P+    L +  + + +H  G NG  + +  + +      H     A+ A+
Sbjct: 57  DVPVYLGSQRPI----LGNWRTVEEVH--GSNGMSNWNYPEPNKRPEKEH-----AIDAI 105
Query: 126 HELTREFKGLISVLCLAPLTNIALTLRLFPQFAQNAKELYIMGGNHKGVGNVTSAAEFNF 185
             L++E +G + +L ++PLTNIAL     P   +  K+++IMGG     GN T  AEFNF
Sbjct: 106 LRLSKEHEGELEILAISPLTNIALAYLKDPSVVKRVKKIWIMGGAFSK-GNTTPIAEFNF 164
Query: 186 LTDPEAAHIVL-GGFHGPICILPWEACLGIDISYEWRYDTLGASDAPYISLLN------- 237
             DPEAA IVL  GF   I I+PWE     +IS      +L   D  YIS LN       
Sbjct: 165 WVDPEAAKIVLDAGFD--ITIVPWEVA---EIS-----GSLNERDWEYISKLNTKLSNFF 214
Query: 238 -RLERGISDRAI-SMGFNKWVPADSALCTCFLDEKAITVSYETTCSVELAGEITRGQACV 295
             + + + +    + G +  +  DS   +   D   I  S      VEL  + +RG   +
Sbjct: 215 INVNKTLKEYTTKNQGISGSIHPDSLTVSIAHDNSIILDSSLKYVDVELCSK-SRGAMLI 273
Query: 296 D--VVHSKTPNVRMIDTVDSRLLKDMLL 321
           D   +H   PN  ++   D    K++L 
Sbjct: 274 DWYSLHKNKPNAEIVLKADGGKFKNLLF 301
>pdb|3T8J|A Chain A, Structural Analysis Of Thermostable S. Solfataricus Pyrimidine- Specific Nucleoside Hydrolase Length = 311 Back     alignment and structure
>pdb|1EZR|A Chain A, Crystal Structure Of Nucleoside Hydrolase From Leishmania Major Length = 314 Back     alignment and structure
>pdb|1MAS|A Chain A, Purine Nucleoside Hydrolase Length = 314 Back     alignment and structure
>pdb|1YOE|A Chain A, Crystal Structure Of A The E. Coli Pyrimidine Nucleoside Hydrolase Ybek With Bound Ribose Length = 322 Back     alignment and structure
>pdb|3G5I|A Chain A, Crystal Structure Of The E.Coli Riha Pyrimidine Nucleosidase Bound To A Iminoribitol-Based Inhibitor Length = 312 Back     alignment and structure
>pdb|3B9X|A Chain A, Crystal Structure Of The E. Coli Pyrimidine Nucleoside Hydrolase Yeik In Complex With Inosine Length = 333 Back     alignment and structure
>pdb|1Q8F|A Chain A, Crystal Structure Of The E.Coli Pyrimidine Nucleoside Hydrolase Yeik Length = 313 Back     alignment and structure
>pdb|3MKM|A Chain A, Crystal Structure Of The E. Coli Pyrimidine Nucleoside Hydrolase Yeik (Apo-Form) Length = 316 Back     alignment and structure
>pdb|3FZ0|A Chain A, Inosine-Guanosine Nucleoside Hydrolase (Ig-Nh) Length = 360 Back     alignment and structure
>pdb|2C40|A Chain A, Crystal Structure Of Inosine-Uridine Preferring Nucleoside Hydrolase From Bacillus Anthracis At 2.2a Resolution Length = 312 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query325
3t8i_A306 Purine nucleosidase, (IUNH-2); purine nucleoside h 3e-78
3t8j_A311 Purine nucleosidase, (IUNH-1); nucleoside hydrolas 7e-78
3fz0_A360 Nucleoside hydrolase, putative; NH fold, open alph 6e-75
1yoe_A322 Hypothetical protein YBEK; pyrimidine nucleoside h 5e-72
2mas_A314 Inosine-uridine nucleoside N-ribohydrolase; purine 3e-69
1q8f_A313 Pyrimidine nucleoside hydrolase; open alpha-beta s 8e-69
2c40_A312 Inosine-uridine preferring nucleoside hydrolase F 2e-63
3epw_A338 IAG-nucleoside hydrolase; rossmann fold, active si 3e-62
>3t8i_A Purine nucleosidase, (IUNH-2); purine nucleoside hydrolase, thermostable protein, open (ALP structure, rossmann fold, NH-fold; 1.80A {Sulfolobus solfataricus} Length = 306 Back     alignment and structure
 Score =  240 bits (614), Expect = 3e-78
 Identities = 88/320 (27%), Positives = 146/320 (45%), Gaps = 24/320 (7%)

Query: 6   RKVILDVDAGIDDAWALLLMLKAEQKNLIEIIAITCCHGNAELSEVVDNVCRVLQAFGRK 65
           RKVI+D D   DD  A+LL  +       +++ +T   GN   ++ V N    L+  G++
Sbjct: 2   RKVIVDSDTATDDTIAILLASRF-----FQLLGVTIVAGNVNYNQEVKNALFTLEYIGKQ 56

Query: 66  NIPVYKGVSKPLIPKDLSHKYSFDWLHFFGKNGFGDIDLGDSDTLDRSCHVENISAVVAL 125
           ++PVY G  +P++    + +         G NG  + +  + +        E   A+ A+
Sbjct: 57  DVPVYLGSQRPILGNWRTVE------EVHGSNGMSNWNYPEPNK-----RPEKEHAIDAI 105

Query: 126 HELTREFKGLISVLCLAPLTNIALTLRLFPQFAQNAKELYIMGGNHKGVGNVTSAAEFNF 185
             L++E +G + +L ++PLTNIAL     P   +  K+++IMGG     GN T  AEFNF
Sbjct: 106 LRLSKEHEGELEILAISPLTNIALAYLKDPSVVKRVKKIWIMGGAF-SKGNTTPIAEFNF 164

Query: 186 LTDPEAAHIVLG-GFHGPICILPWEACLGIDISYEWRYDTLGASDAPYISLLNRLERGIS 244
             DPEAA IVL  GF   I I+PWE         E  ++ +   +    +    + + + 
Sbjct: 165 WVDPEAAKIVLDAGF--DITIVPWEVAEISGSLNERDWEYISKLNTKLSNFFINVNKTLK 222

Query: 245 DRAI-SMGFNKWVPADSALCTCFLDEKAITVSYETTCSVELAGEITRGQACVDV--VHSK 301
           +    + G +  +  DS   +   D   I  S      VEL  + +RG   +D   +H  
Sbjct: 223 EYTTKNQGISGSIHPDSLTVSIAHDNSIILDSSLKYVDVELCSK-SRGAMLIDWYSLHKN 281

Query: 302 TPNVRMIDTVDSRLLKDMLL 321
            PN  ++   D    K++L 
Sbjct: 282 KPNAEIVLKADGGKFKNLLF 301
>3t8j_A Purine nucleosidase, (IUNH-1); nucleoside hydrolase, thermostable protein, open (alpha,beta structure, rossmann fold, NH-fold; 1.60A {Sulfolobus solfataricus} Length = 311 Back     alignment and structure
>3fz0_A Nucleoside hydrolase, putative; NH fold, open alpha/beta structure, glycosidase; HET: BTB; 2.50A {Trypanosoma brucei} Length = 360 Back     alignment and structure
>1yoe_A Hypothetical protein YBEK; pyrimidine nucleoside hydrolase, bacterial nucleosidase, RIB enzyme-product complex, hydrolase; HET: RIB; 1.78A {Escherichia coli} PDB: 3g5i_A* Length = 322 Back     alignment and structure
>2mas_A Inosine-uridine nucleoside N-ribohydrolase; purine nucleoside hydrolase, IU-NH, purine nucleosidase; HET: PIR; 2.30A {Crithidia fasciculata} SCOP: c.70.1.1 PDB: 1mas_A* 1ezr_A Length = 314 Back     alignment and structure
>1q8f_A Pyrimidine nucleoside hydrolase; open alpha-beta structure, NH-fold; 1.70A {Escherichia coli} SCOP: c.70.1.1 PDB: 3b9x_A* 3mkn_A* 3mkm_A* Length = 313 Back     alignment and structure
>2c40_A Inosine-uridine preferring nucleoside hydrolase F protein; spine; 2.2A {Bacillus anthracis} Length = 312 Back     alignment and structure
>3epw_A IAG-nucleoside hydrolase; rossmann fold, active site loops, aromatic stacking; HET: JMQ; 1.30A {Trypanosoma vivax} PDB: 3epx_A* 1hoz_A 1hp0_A* 2ff1_A* 2ff2_A* 1kic_A* 1kie_A* 1r4f_A* 3b9g_A* Length = 338 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query325
3t8j_A311 Purine nucleosidase, (IUNH-1); nucleoside hydrolas 100.0
1q8f_A313 Pyrimidine nucleoside hydrolase; open alpha-beta s 100.0
1yoe_A322 Hypothetical protein YBEK; pyrimidine nucleoside h 100.0
2mas_A314 Inosine-uridine nucleoside N-ribohydrolase; purine 100.0
3fz0_A360 Nucleoside hydrolase, putative; NH fold, open alph 100.0
3t8i_A306 Purine nucleosidase, (IUNH-2); purine nucleoside h 100.0
2c40_A312 Inosine-uridine preferring nucleoside hydrolase F 100.0
3epw_A338 IAG-nucleoside hydrolase; rossmann fold, active si 100.0
2yhg_A437 SDE_182CT, cellulose-binding protein; hydrolase, g 99.12
>3t8j_A Purine nucleosidase, (IUNH-1); nucleoside hydrolase, thermostable protein, open (alpha,beta structure, rossmann fold, NH-fold; 1.60A {Sulfolobus solfataricus} Back     alignment and structure
Probab=100.00  E-value=3.2e-78  Score=564.43  Aligned_cols=300  Identities=27%  Similarity=0.447  Sum_probs=265.5

Q ss_pred             ceEEEeCCCCchHHHHHHHHHhCCCCCceEEEEEEeecCCCCHHHHHHHHHHHHHHhCCCCCCcccCCCCCCCCCCccCc
Q psy17834          6 RKVILDVDAGIDDAWALLLMLKAEQKNLIEIIAITCCHGNAELSEVVDNVCRVLQAFGRKNIPVYKGVSKPLIPKDLSHK   85 (325)
Q Consensus         6 ~kvIiDtD~G~DDa~Al~~al~~~~~~~i~l~gVt~v~Gn~~~~~~~~n~~~~l~~~g~~~IPV~~G~~~pl~~~~~~~~   85 (325)
                      +|||||||+|+||++||+|| .+|+   +||+|||+++||++++++++|++++|+.+|+ +||||+|+.+||.++...  
T Consensus         2 ~kvIiDtD~G~DDa~Al~~a-~~p~---iel~gIttv~GN~~~~~~~~Na~~ll~~~g~-diPV~~Ga~~Pl~~~~~~--   74 (311)
T 3t8j_A            2 RHFIIDCDTAEDDVLSLYLL-LKNN---IDVVAVTIVEGNISYEQEVKNALWALEQVNR-EIPVYPGANKPLLKNYIT--   74 (311)
T ss_dssp             CEEEEEECCSHHHHHHHHHH-HHTT---CEEEEEEECSSSSCHHHHHHHHHHHHHHTTC-CCCEEECCSSCSSSCCCC--
T ss_pred             ceEEEECCCChHHHHHHHHH-cCCC---CEEEEEEEccCCCCHHHHHHHHHHHHHHcCC-CCCEEECCCCCCCCCCcc--
Confidence            69999999999999999999 7788   9999999999999999999999999999999 999999999999876433  


Q ss_pred             cccccccccCCCCCCCCCCCCCCCcccccCCCCCcHHHHHHHHHHhCCCcEEEEEccchHHHHHHHHHCcchhhccCcEE
Q psy17834         86 YSFDWLHFFGKNGFGDIDLGDSDTLDRSCHVENISAVVALHELTREFKGLISVLCLAPLTNIALTLRLFPQFAQNAKELY  165 (325)
Q Consensus        86 ~a~~~~~~hG~dglg~~~~~~p~~~~~~~~~~~~~a~~~l~~~~~~~~~~vtiv~iGpLTNiA~al~~~P~~~~~i~~iv  165 (325)
                       +   .++||.+|||+..+  | .+.. ..+++ +|+++|+++++++|++||||++|||||||+||+++|+++++||+||
T Consensus        75 -a---~~~hG~~Glg~~~~--p-~~~~-~~~~~-~A~~~i~~~~~~~~~~vtiva~GpLTNlA~al~~~P~i~~~i~~iv  145 (311)
T 3t8j_A           75 -V---EKVHGKGGIGDVTV--E-PKRL-KAQEK-HAALAIIDLANEYAGELEFLAISPLTNLALAYLLDNSIVKKIKKVW  145 (311)
T ss_dssp             -C---HHHHCTTSSSSCCC--C-CSSC-CCCSS-CHHHHHHHHHHHTTTTEEEEECSCSHHHHHHHHHCTTHHHHEEEEE
T ss_pred             -c---hhhcCCCCCCCCCC--C-CCCC-CCCCc-hHHHHHHHHHHhCCCCeEEEEecChHHHHHHHHHChHHHhhcCEEE
Confidence             2   78999999999876  5 2332 24555 9999999999999999999999999999999999999999999999


Q ss_pred             EecCcccCCCCCCccccccCCCCHHHHHHHHhcCCCCeEEecCCccccccCChHHHHHHhCCCChHHHHHHHHHHHHHhh
Q psy17834        166 IMGGNHKGVGNVTSAAEFNFLTDPEAAHIVLGGFHGPICILPWEACLGIDISYEWRYDTLGASDAPYISLLNRLERGISD  245 (325)
Q Consensus       166 iMGG~~~~~GN~~~~aE~N~~~DPeAA~~Vl~s~g~~i~~vpld~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (325)
                      ||||++...||++|.+|||||+|||||++||++ |.|++|+|||+|.+..++.+. ++++.+.+++.++++.++++. |.
T Consensus       146 iMGG~~~~~GN~tp~aEfN~~~DPeAA~~V~~s-g~~i~~v~ldvt~~~~lt~~~-~~~l~~~~~~~~~~~~~~~~~-~~  222 (311)
T 3t8j_A          146 VMGGAVFGIGNITPVAEFNIWVDPDAAKIVFNA-GFDITMIPWDVIINYPVTDEE-WNVIKNMKTRMSELYVSMYLH-YR  222 (311)
T ss_dssp             EECCCTTSCCSSSSSCCHHHHHCHHHHHHHHHT-TCCEEEECHHHHTTSCBCHHH-HHHHHTSCSHHHHHHHHHHHH-HH
T ss_pred             EcCCcccCCCCCCchhhhccccCHHHHHHHHhC-CCCEEEecccccccccCCHHH-HHHHHhhCCHHHHHHHHHHHH-HH
Confidence            999998889999999999999999999999997 999999999999878888754 366666678888888776543 22


Q ss_pred             hh--hhcCCCCCCCCcHHHHHHHhcCCceeeEEEeeEEEEeeCCcccceEEEecCC-----CCCCCeEEEeccCHHHHHH
Q psy17834        246 RA--ISMGFNKWVPADSALCTCFLDEKAITVSYETTCSVELAGEITRGQACVDVVH-----SKTPNVRMIDTVDSRLLKD  318 (325)
Q Consensus       246 ~~--~~~~~~~~~~~D~la~a~~~~P~~~~~~~~~~v~V~~~g~~~~G~tv~d~~~-----~~~~~v~v~~~vd~~~f~~  318 (325)
                      .+  ..++..++++||++|++++++|++|+++++.+|+||++|+++||+|++|+.+     ++++|++|++++|.++|++
T Consensus       223 ~~~~~~~g~~g~~lhD~lava~~l~P~l~~~~~~~~v~Ve~~g~~t~G~tv~d~~~~~~~~~~~~n~~v~~~vD~~~f~~  302 (311)
T 3t8j_A          223 QYSSTVQKINGHPHPDAITTAIAIDGSIATRREKRFVVIDNTDNITRGMTLVDRFDADTSWSDKPNAEIVYEINKKSFME  302 (311)
T ss_dssp             HHHHHTSCCSSBCCHHHHHHHHHHCGGGEEEEEEEEEEECCSSSTTTTCEEEECSCSSSCSCSSCCEEEEEEECHHHHHH
T ss_pred             HHHHhhcCCCCCcCcCHHHHHHHhCHHHhhccceeeEEEecCCCCCCceEEEecCCCcccCCCCCCEEEeeccCHHHHHH
Confidence            21  2456778999999999999999999756899999999999999999999864     3358999999999999999


Q ss_pred             HHhhhh
Q psy17834        319 MLLWIK  324 (325)
Q Consensus       319 ~l~~~~  324 (325)
                      +|.+++
T Consensus       303 ~~~~~l  308 (311)
T 3t8j_A          303 KIYDLL  308 (311)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            999875
>1q8f_A Pyrimidine nucleoside hydrolase; open alpha-beta structure, NH-fold; 1.70A {Escherichia coli} SCOP: c.70.1.1 PDB: 3b9x_A* 3mkn_A* 3mkm_A* Back     alignment and structure
>1yoe_A Hypothetical protein YBEK; pyrimidine nucleoside hydrolase, bacterial nucleosidase, RIB enzyme-product complex, hydrolase; HET: RIB; 1.78A {Escherichia coli} PDB: 3g5i_A* Back     alignment and structure
>2mas_A Inosine-uridine nucleoside N-ribohydrolase; purine nucleoside hydrolase, IU-NH, purine nucleosidase; HET: PIR; 2.30A {Crithidia fasciculata} SCOP: c.70.1.1 PDB: 1mas_A* 1ezr_A Back     alignment and structure
>3fz0_A Nucleoside hydrolase, putative; NH fold, open alpha/beta structure, glycosidase; HET: BTB; 2.50A {Trypanosoma brucei} Back     alignment and structure
>3t8i_A Purine nucleosidase, (IUNH-2); purine nucleoside hydrolase, thermostable protein, open (ALP structure, rossmann fold, NH-fold; 1.80A {Sulfolobus solfataricus} Back     alignment and structure
>2c40_A Inosine-uridine preferring nucleoside hydrolase F protein; spine; 2.2A {Bacillus anthracis} Back     alignment and structure
>3epw_A IAG-nucleoside hydrolase; rossmann fold, active site loops, aromatic stacking; HET: JMQ; 1.30A {Trypanosoma vivax} SCOP: c.70.1.1 PDB: 3epx_A* 1hoz_A 1hp0_A* 2ff1_A* 2ff2_A* 1kic_A* 1kie_A* 1r4f_A* 3b9g_A* Back     alignment and structure
>2yhg_A SDE_182CT, cellulose-binding protein; hydrolase, glycoside hydrolase; HET: BTB; 1.08A {Saccharophagus degradans} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 325
d1kica_327 c.70.1.1 (A:) Inosine-adenosine-guanosine preferri 1e-57
d2masa_313 c.70.1.1 (A:) Inosine-uridine nucleoside N-ribohyd 2e-50
d1q8fa_308 c.70.1.1 (A:) Pyrimidine nucleoside hydrolase YeiK 8e-50
>d1kica_ c.70.1.1 (A:) Inosine-adenosine-guanosine preferring nucleoside hydrolase {Trypanosoma vivax [TaxId: 5699]} Length = 327 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Nucleoside hydrolase
superfamily: Nucleoside hydrolase
family: Nucleoside hydrolase
domain: Inosine-adenosine-guanosine preferring nucleoside hydrolase
species: Trypanosoma vivax [TaxId: 5699]

 Score =  187 bits (475), Expect = 1e-57
 Identities = 51/326 (15%), Positives = 108/326 (33%), Gaps = 15/326 (4%)

Query: 5   PRKVILDVDAGIDDAWALLLMLKAEQKNLIEIIAITCCHGNAELSEVVDNVCRVLQAF-G 63
            + V+LD    +DD  A++L+    +K  + +I   C   +  +    +   +++     
Sbjct: 2   AKNVVLDHAGNLDDFVAMVLLASNTEK--VRLIGALCTDADCFVENGFNVTGKIMCLMHN 59

Query: 64  RKNIPVYKGVSKPLIPKDLSHKYSFDWLHFFGKNGFGDIDLGDSDTL--DRSCHVENISA 121
             N+P++          +   K           +    +++ ++  L        E    
Sbjct: 60  NMNLPLFPIGKSAATAVNPFPKEWRC--LAKNMDDMPILNIPENVELWDKIKAENEKYEG 117

Query: 122 VVALHELTREFKGLISVLCLAPLTNIALTLRL-FPQFAQNAKELYIMGGNHKGVGNV--- 177
              L +L    +  +++    PL+N+A  +     +F    +E  IMGG     GNV   
Sbjct: 118 QQLLADLVMNSEEKVTICVTGPLSNVAWCIDKYGEKFTSKVEECVIMGGAVDVRGNVFLP 177

Query: 178 --TSAAEFNFLTDPEAAHIVLGGFHGPICILPWEACLGIDISYEWRYDTLGASDAPYISL 235
                AE+N   DP +A  V G       +   ++   + +   +     G      +S+
Sbjct: 178 STDGTAEWNIYWDPASAKTVFGCPGLRRIMFSLDSTNTVPVRSPY-VQRFGEQTNFLLSI 236

Query: 236 LNRLERGISDRAISMGFNKWVPADSALCTCFLDEKAITVSYETTCSVELAGEITRGQACV 295
           L      +      +       A  AL   ++ ++ +         V +  +   G    
Sbjct: 237 LVGTMWAMCTHCELLRDGDGYYAWDALTAAYVVDQKVANVDPVPIDVVVDKQPNEGATVR 296

Query: 296 DVVHSKTPNVRMIDTVDSRLLKDMLL 321
                  P   +    ++    DMLL
Sbjct: 297 T-DAENYPLTFVARNPEAEFFLDMLL 321
>d2masa_ c.70.1.1 (A:) Inosine-uridine nucleoside N-ribohydrolase, IU-NH {Crithidia fasciculata [TaxId: 5656]} Length = 313 Back     information, alignment and structure
>d1q8fa_ c.70.1.1 (A:) Pyrimidine nucleoside hydrolase YeiK {Escherichia coli [TaxId: 562]} Length = 308 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query325
d2masa_313 Inosine-uridine nucleoside N-ribohydrolase, IU-NH 100.0
d1q8fa_308 Pyrimidine nucleoside hydrolase YeiK {Escherichia 100.0
d1kica_327 Inosine-adenosine-guanosine preferring nucleoside 100.0
>d2masa_ c.70.1.1 (A:) Inosine-uridine nucleoside N-ribohydrolase, IU-NH {Crithidia fasciculata [TaxId: 5656]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Nucleoside hydrolase
superfamily: Nucleoside hydrolase
family: Nucleoside hydrolase
domain: Inosine-uridine nucleoside N-ribohydrolase, IU-NH
species: Crithidia fasciculata [TaxId: 5656]

Probab=100.00  E-value=1.1e-75  Score=547.51  Aligned_cols=301  Identities=27%  Similarity=0.359  Sum_probs=263.1

Q ss_pred             ceEEEeCCCCchHHHHHHHHHhCCCCCceEEEEEEeecCCCCHHHHHHHHHHHHHHhCCCCCCcccCCCCCCCCCCccCc
Q psy17834          6 RKVILDVDAGIDDAWALLLMLKAEQKNLIEIIAITCCHGNAELSEVVDNVCRVLQAFGRKNIPVYKGVSKPLIPKDLSHK   85 (325)
Q Consensus         6 ~kvIiDtD~G~DDa~Al~~al~~~~~~~i~l~gVt~v~Gn~~~~~~~~n~~~~l~~~g~~~IPV~~G~~~pl~~~~~~~~   85 (325)
                      ||||||||+|+||++||+|||++|+   +||+|||+|+||++++++++|++++|+.+|+++||||+|+..|+.++...  
T Consensus         2 kkvIiDtD~G~DDa~Al~~al~~p~---vel~gIt~v~GN~~~~~~~~n~~~ll~~~g~~~iPV~~G~~~~~~~~~~~--   76 (313)
T d2masa_           2 KKIILDCDPGLDDAVAILLAHGNPE---IELLAITTVVGNQTLAKVTRNAQLVADIAGITGVPIAAGCDKPLVRKIMT--   76 (313)
T ss_dssp             EEEEEEECCSHHHHHHHHHHHHCTT---EEEEEEEECSSSSCHHHHHHHHHHHHHHTTCCSCCEEECCSSCSSSCCCC--
T ss_pred             CEEEEECCCCHHHHHHHHHHhhCCC---cEEEEEEEccCCcCHHHHHHHHHHHHHHhCCCCCcEEecCCCcccccccc--
Confidence            7899999999999999999999998   99999999999999999999999999999999999999999999876543  


Q ss_pred             cccccccccCCCCCCCCCCCCCCCcccccCCCCCcHHHHHHHHHHhC-CCcEEEEEccchHHHHHHHHHCcchhhccCcE
Q psy17834         86 YSFDWLHFFGKNGFGDIDLGDSDTLDRSCHVENISAVVALHELTREF-KGLISVLCLAPLTNIALTLRLFPQFAQNAKEL  164 (325)
Q Consensus        86 ~a~~~~~~hG~dglg~~~~~~p~~~~~~~~~~~~~a~~~l~~~~~~~-~~~vtiv~iGpLTNiA~al~~~P~~~~~i~~i  164 (325)
                       +   .++||.+|+|+..+  |. +......+. +|+.+++++++++ |++||||++|||||||+||+++|++.++||+|
T Consensus        77 -~---~~~~g~~g~g~~~~--p~-~~~~~~~~~-~a~~~~i~~~~~~~p~~itiva~GPLTNlA~al~~~P~~~~~ik~i  148 (313)
T d2masa_          77 -A---GHIHGESGMGTVAY--PA-EFKNKVDER-HAVNLIIDLVMSHEPKTITLVPTGGLTNIAMAARLEPRIVDRVKEV  148 (313)
T ss_dssp             -C---HHHHCSSSSTTCCC--CS-SCSSCBCSS-CHHHHHHHHHHHSCTTCEEEEECSCSHHHHHHHHHCTHHHHHSCEE
T ss_pred             -h---hhccccCCCCCccC--Cc-cccccccch-hhhHHHHHHHhhcCCCcEEEEEcCCchHHHHHHHhhhhhhhhcCeE
Confidence             2   67899999999876  52 222234554 8999999988776 89999999999999999999999999999999


Q ss_pred             EEecCcccCCCCCCccccccCCCCHHHHHHHHhcCCCCeEEecCCccccccCChHHHHHHhCCCChHHHHHHHHHHHHHh
Q psy17834        165 YIMGGNHKGVGNVTSAAEFNFLTDPEAAHIVLGGFHGPICILPWEACLGIDISYEWRYDTLGASDAPYISLLNRLERGIS  244 (325)
Q Consensus       165 viMGG~~~~~GN~~~~aE~N~~~DPeAA~~Vl~s~g~~i~~vpld~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (325)
                      |||||++. +||+++.+|||||+|||||++||+| +.|++++|||+|++..++.+.. +++.+.+++..+++.+.... |
T Consensus       149 viMGG~~~-~GN~~~~aEfN~~~DPeAA~iVl~s-~~~i~~v~ldvt~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~  224 (313)
T d2masa_         149 VLMGGGYH-EGNATSVAEFNIIIDPEAAHIVFNE-SWQVTMVGLDLTHQALATPPIL-QRVKEVDTNPARFMLEIMDY-Y  224 (313)
T ss_dssp             EEECCCSS-CCSSSSSCCHHHHTCHHHHHHHHHS-SSCEEEECHHHHTTCEECHHHH-HHHHTTCSHHHHHHHHHHHH-H
T ss_pred             EEeccCCC-CCCCccccccceeeChHHHHHHhcc-CCCeEEecchhhhcccCCHHHH-HHHHHhhhhHHHHHHHHHHH-H
Confidence            99999986 6999999999999999999999997 9999999999999999998653 55656677777776655432 2


Q ss_pred             hhh--hhcCCCCCCCCcHHHHHHHhcCCceeeEEEeeEEEEeeCCcccceEEEecCC--CCCCCeEEEeccCHHHHHHHH
Q psy17834        245 DRA--ISMGFNKWVPADSALCTCFLDEKAITVSYETTCSVELAGEITRGQACVDVVH--SKTPNVRMIDTVDSRLLKDML  320 (325)
Q Consensus       245 ~~~--~~~~~~~~~~~D~la~a~~~~P~~~~~~~~~~v~V~~~g~~~~G~tv~d~~~--~~~~~v~v~~~vd~~~f~~~l  320 (325)
                      .+.  ..++..++++||++|++++++|++++ +++.+|+|+++|+++||+|++|+++  ++.+|++|++++|.++|+++|
T Consensus       225 ~~~~~~~~~~~~~~l~D~lA~a~~idP~l~~-~~~~~v~Vet~g~~trG~tv~d~~~~~~~~~n~~V~~~vD~~~F~~~l  303 (313)
T d2masa_         225 TKIYQSNRYMAAAAVHDPCAVAYVIDPSVMT-TERVPVDIELTGKLTLGMTVADFRNPRPEHCHTQVAVKLDFEKFWGLV  303 (313)
T ss_dssp             HHHHHSTTCCSSEECCHHHHHHHHHCGGGEE-EEECCEEECSSCSSCTTCEEECCCSSCCSSCSEEEEEEECHHHHHHHH
T ss_pred             HHHHHhccCcCCCccCcHHHhHHhcCcceeE-EEEEeEEEEeCCCCCCCeEEEecccCCCCCCCeEEEeeCCHHHHHHHH
Confidence            211  23455678899999999999999986 7899999999999999999999875  345899999999999999999


Q ss_pred             hhhh
Q psy17834        321 LWIK  324 (325)
Q Consensus       321 ~~~~  324 (325)
                      ++++
T Consensus       304 ~~~L  307 (313)
T d2masa_         304 LDAL  307 (313)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            9875
>d1q8fa_ c.70.1.1 (A:) Pyrimidine nucleoside hydrolase YeiK {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1kica_ c.70.1.1 (A:) Inosine-adenosine-guanosine preferring nucleoside hydrolase {Trypanosoma vivax [TaxId: 5699]} Back     information, alignment and structure