Psyllid ID: psy17893

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140---
Protein Sequence
MSGLELERDLISIMSDLIDMSVPMTPRKCVCPTTLDSKSIKSAYEDVRSDASQTQWAVFKYQDSKISCTARGQSFDKFRAQFRPDERSFGYLRMMTGDEMSRRLKFLLITWVGCEVGVIQRAKVSIDKALVKSVITFKFKFKF
Secondary Structure (PSIPRED)
ccccccHHHHHHHHcccEEEEEEcccEEEcccccccHHHHHHHHHHHHccccccEEEEEEEcccEEEEEEccccHHHHHHHcccccEEEEEEEEEEcccccccEEEEEEEEEccccccccHHHccccHHHHHHHHccccEEEc
Secondary Structure Prediction (SSPRO)
cccHHHHHHHHHHHHHHHHHHccccccccEEEEEccHHHHHHHHHHHHcccccccEEEEEEcccEEEEEEccccHHHHHHHcccccEEEEEEEEEEccccccccEEEEEEEEcccccHHHHcEHcccHHHHHHHHHHHHHccc
Coil and Loop (DISEMBL)
MSGLELERDLISIMSDLidmsvpmtprkcvcpttldsksIKSAYEDVRSDASQTQWAVFKYQdskisctargqsfdkfraqfrpdersfgylrMMTGDEMSRRLKFLLITWVGCEVGVIQRAKVSIDKALVKSVITFKFKFKF
Flexible Loop (DISEMBL)
MSGLELERDLISIMSDlidmsvpmtPRKCVCPTTLDSKSIKSAYEDVRSDASQTQWAVFKYQDSKISCTargqsfdkfraqfrpdersfGYLRMMTGDEMSRRLKFLLITWVGCEVGVIQRAkvsidkalvksvitfkfkfkf
Low Complexity Region (SEG)
MSGLELERDLISIMSDLIDMSVPMTPRKCVCPTTLDSKSIKSAYEDVRSDASQTQWAVFKYQDSKISCTARGQSFDKFRAQFRPDERSFGYLRMMTGDEMSRRLKFLLITWVGCEVGVIQRAKVSIDKALVKSVITFKFKFKF
Disordered region (IsUnstruct)
*********LISIMSDLIDMSVPMTPRKCVCPTTLD****************QTQWAVFKYQDSKISCTARGQSFDKFRAQFRPDERSFGYLRMMTGDEMSRRLKFLLITWVGCEVGVIQRAKVSIDKALVKSVITFKFKF**
Disordered Region (DISOPRED)
*********LISIMSDL**********************IKSAYEDVRSDASQTQWAVFKYQDSKISCTARGQSFDKFRAQFRPDERSFGYLRMMTGDEMSRRLKFLLITWVGCEVGVIQRAKVSIDKALVKSVITFKFKFKF
Disordered Region (DISEMBL)
MSGLELERDLISIMSDLIDMSVPMTPRKCVCPTTLDSKSIKSA*********QTQWAVFKYQDSKISCTARGQSFDKFRAQFRPDERSFGYLRMMTGDEMSRRLKFLLITWVGCEVGVIQRAKVSIDKALVKSVITFKFKFKF
Disordered Region (DISPRO)
**GLELERDLISIMSDLIDMSVPMTPRKCVCPTTLDSKSIKSAYEDVRSDASQTQWAVFKYQDSKISCTARGQSFDKFRAQFRPDERSFGYLRMMTGDEMSRRLKFLLITWVGCEVGVIQRAKVSIDKALVKSVITFKFKFKF
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MSGLELERDLISIMSDLIDMSVPMTPRKCVCPTTLDSKSIKSAYEDVRSDASQTQWAVFKYQDSKISCTARGQSFDKFRAQFRPDERSFGYLRMMTGDEMSRRLKFLLITWVGCEVGVIQRAKVSIDKALVKSVITFKFKFKF
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	143	2.2.26 [Sep-21-2011]
Q14019	142	Coactosin-like protein OS	yes	N/A	0.727	0.732	0.432	1e-17
Q2HJ57	142	Coactosin-like protein OS	yes	N/A	0.727	0.732	0.432	1e-17
B0BNA5	142	Coactosin-like protein OS	yes	N/A	0.727	0.732	0.423	3e-17
Q9CQI6	142	Coactosin-like protein OS	yes	N/A	0.727	0.732	0.413	6e-17
P34121	146	Coactosin OS=Dictyosteliu	yes	N/A	0.706	0.691	0.403	3e-16
Q9P7E8	857	Protein app1 OS=Schizosac	yes	N/A	0.692	0.115	0.283	9e-05

>sp|Q14019|COTL1_HUMAN Coactosin-like protein OS=Homo sapiens GN=COTL1 PE=1 SV=3

 Score = 88.6 bits (218), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 45/104 (43%), Positives = 58/104 (55%)

Query: 32  PTTLDSKSIKSAYEDVRSDASQTQWAVFKYQDSKISCTARGQSFDKFRAQFRPDERSFGY 91
            T +D ++ ++AY  VR D S   W  FKY  S I    +G  +  F  Q   D R F +
Sbjct: 2   ATKIDKEACRAAYNLVRDDGSAVIWVTFKYDGSTIVPGEQGAEYQHFIQQCTDDVRLFAF 61

Query: 92  LRMMTGDEMSRRLKFLLITWVGCEVGVIQRAKVSIDKALVKSVI 135
           +R  TGD MS+R KF LITW+G  V  +QRAK   DK LVK V+
Sbjct: 62  VRFTTGDAMSKRSKFALITWIGENVSGLQRAKTGTDKTLVKEVV 105

Binds to F-actin in a calcium-independent manner. Has no direct effect on actin depolymerization.
Homo sapiens (taxid: 9606)

>sp|Q2HJ57|COTL1_BOVIN Coactosin-like protein OS=Bos taurus GN=COTL1 PE=2 SV=3

 Score = 88.2 bits (217), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 45/104 (43%), Positives = 59/104 (56%)

Query: 32  PTTLDSKSIKSAYEDVRSDASQTQWAVFKYQDSKISCTARGQSFDKFRAQFRPDERSFGY 91
            T +D ++ ++AY  VR D+S   W  FKY  S I    +G  +  F  Q   D R F +
Sbjct: 2   ATKIDKEACRTAYNLVRDDSSAVIWVTFKYDGSTIVPGEQGAEYQDFIQQCTDDVRLFAF 61

Query: 92  LRMMTGDEMSRRLKFLLITWVGCEVGVIQRAKVSIDKALVKSVI 135
           +R  TGD MS+R KF LITW+G  V  +QRAK   DK LVK V+
Sbjct: 62  VRFTTGDAMSKRSKFALITWIGENVSGLQRAKTGTDKTLVKEVV 105

Binds to F-actin in a calcium-independent manner. Has no direct effect on actin depolymerization.

Bos taurus (taxid: 9913)

>sp|B0BNA5|COTL1_RAT Coactosin-like protein OS=Rattus norvegicus GN=Cotl1 PE=1 SV=1

 Score = 87.4 bits (215), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 44/104 (42%), Positives = 59/104 (56%)

Query: 32  PTTLDSKSIKSAYEDVRSDASQTQWAVFKYQDSKISCTARGQSFDKFRAQFRPDERSFGY 91
            T +D ++ ++AY  VR D S   W  FKY  + I    +G  +  F  Q   D R F +
Sbjct: 2   ATKIDKEACRAAYNLVRDDGSSVIWVTFKYDGATIVPGDQGADYQHFIQQCTDDVRLFAF 61

Query: 92  LRMMTGDEMSRRLKFLLITWVGCEVGVIQRAKVSIDKALVKSVI 135
           +R  TGD MS+R KF LITW+G +V  +QRAK   DK LVK V+
Sbjct: 62  VRFTTGDAMSKRSKFALITWIGEDVSGLQRAKTGTDKTLVKEVV 105

Binds to F-actin in a calcium-independent manner. Has no direct effect on actin depolymerization.

Rattus norvegicus (taxid: 10116)

>sp|Q9CQI6|COTL1_MOUSE Coactosin-like protein OS=Mus musculus GN=Cotl1 PE=1 SV=3

 Score = 86.3 bits (212), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 43/104 (41%), Positives = 59/104 (56%)

Query: 32  PTTLDSKSIKSAYEDVRSDASQTQWAVFKYQDSKISCTARGQSFDKFRAQFRPDERSFGY 91
            T +D ++ ++AY  VR D S   W  F+Y  + I    +G  +  F  Q   D R F +
Sbjct: 2   ATKIDKEACRAAYNLVRDDGSAVIWVTFRYDGATIVPGDQGADYQHFIQQCTDDVRLFAF 61

Query: 92  LRMMTGDEMSRRLKFLLITWVGCEVGVIQRAKVSIDKALVKSVI 135
           +R  TGD MS+R KF LITW+G +V  +QRAK   DK LVK V+
Sbjct: 62  VRFTTGDAMSKRSKFALITWIGEDVSGLQRAKTGTDKTLVKEVV 105

Binds to F-actin in a calcium-independent manner. Has no direct effect on actin depolymerization.

Mus musculus (taxid: 10090)

>sp|P34121|COAA_DICDI Coactosin OS=Dictyostelium discoideum GN=coaA PE=1 SV=1

 Score = 84.0 bits (206), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 42/104 (40%), Positives = 69/104 (66%), Gaps = 3/104 (2%)

Query: 35  LDSKSIKSAYEDVRSDASQTQWAVFKYQD-SKISCTARGQS-FDKFRAQF-RPDERSFGY 91
           + S  +K+AY++V +D++ T W +FKY+  +KI  + +G   F +   +  +P ER + Y
Sbjct: 4   VSSTELKAAYDEVLADSNDTNWCLFKYEGKNKIVLSGKGSGGFAELAQEINQPSERLYAY 63

Query: 92  LRMMTGDEMSRRLKFLLITWVGCEVGVIQRAKVSIDKALVKSVI 135
           LR+++GD+ S+R KF+ I+W G EVG + +A VS+ KA VK VI
Sbjct: 64  LRVVSGDDESKRSKFVFISWCGEEVGPLAKANVSVHKASVKQVI 107

Binds to F-actin in a calcium independent manner. Binds to the filaments along their length.

Dictyostelium discoideum (taxid: 44689)

>sp|Q9P7E8|APP1_SCHPO Protein app1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=app1 PE=2 SV=1

 Score = 45.8 bits (107), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 30/106 (28%), Positives = 50/106 (47%), Gaps = 7/106 (6%)

Query: 33  TTLDSKSIKSAYEDVRSDASQTQWAVFKYQDSK---ISCTARGQSFDKFRAQFRPDERSF 89
           T+     I++ YE V S A    WA+F Y+  +   +   A G   D+F  +F  +   F
Sbjct: 7   TSTHGAEIRNVYEKVLSGADDCSWAIFGYEKGQGNILKVVASGNDNDEFLDEFDENAVLF 66

Query: 90  GYLRMMTGDEMSRRLKFLLITWVGCEVGVIQRAKVSIDKALVKSVI 135
           G+LR+   D  +   KF+L+ W  C     ++   SI  A V +++
Sbjct: 67  GFLRVK--DVNTGLNKFVLVCW--CGEAAARKGLFSIHMATVSNLL 108

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	143
347964694	163	AGAP000889-PA [Anopheles gambiae str. PE	0.860	0.754	0.544	1e-33
289739495	163	coactosin-like protein [Glossina morsita	0.860	0.754	0.552	2e-33
194769436	163	GF19083 [Drosophila ananassae] gi|190618	0.860	0.754	0.552	2e-32
114051842	163	cyclic AMP-regulated protein [Bombyx mor	0.804	0.705	0.556	2e-32
24643106	163	CG6891, isoform A [Drosophila melanogast	0.860	0.754	0.544	2e-32
195403221	163	GJ18476 [Drosophila virilis] gi|19414103	0.860	0.754	0.536	3e-32
157123252	163	hypothetical protein AaeL_AAEL009467 [Ae	0.860	0.754	0.504	3e-32
389608847	164	similar to CG6891 [Papilio xuthus] gi|38	0.804	0.701	0.556	4e-32
195134618	163	GI11191 [Drosophila mojavensis] gi|19390	0.860	0.754	0.528	6e-32
195041108	163	GH12531 [Drosophila grimshawi] gi|193900	0.860	0.754	0.528	8e-32

>gi|347964694|ref|XP_316866.4| AGAP000889-PA [Anopheles gambiae str. PEST] gi|333469465|gb|EAA12148.4| AGAP000889-PA [Anopheles gambiae str. PEST]

 Score =  147 bits (371), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 68/125 (54%), Positives = 91/125 (72%), Gaps = 2/125 (1%)

Query: 14  MSDLIDMS--VPMTPRKCVCPTTLDSKSIKSAYEDVRSDASQTQWAVFKYQDSKISCTAR 71
           MSD +++       PRK   PT+LD  +I+ AYEDVRS+ S  +WAVFK+   KI C+A+
Sbjct: 1   MSDSVEVEQMAESKPRKMALPTSLDKDAIREAYEDVRSNMSDHEWAVFKFDGLKIVCSAK 60

Query: 72  GQSFDKFRAQFRPDERSFGYLRMMTGDEMSRRLKFLLITWVGCEVGVIQRAKVSIDKALV 131
           GQ F +F AQF  DER+FGY+R+  GDEMS+R KFL +TW+G EVGV+QRAK+S DK+++
Sbjct: 61  GQGFQEFCAQFHDDERAFGYIRIQMGDEMSKRSKFLFLTWIGPEVGVMQRAKMSTDKSII 120

Query: 132 KSVIT 136
           K VI 
Sbjct: 121 KDVIN 125

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|289739495|gb|ADD18495.1| coactosin-like protein [Glossina morsitans morsitans]

 Score =  147 bits (370), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 69/125 (55%), Positives = 92/125 (73%), Gaps = 2/125 (1%)

Query: 14  MSDLIDMS--VPMTPRKCVCPTTLDSKSIKSAYEDVRSDASQTQWAVFKYQDSKISCTAR 71
           MSD I++   V   PR+    T+LD  +I+ AYEDVRSD + T+WAVFK+   +I CTAR
Sbjct: 1   MSDGIEVEQMVESKPRRMPMATSLDKDAIREAYEDVRSDLTDTEWAVFKFDGPRIICTAR 60

Query: 72  GQSFDKFRAQFRPDERSFGYLRMMTGDEMSRRLKFLLITWVGCEVGVIQRAKVSIDKALV 131
           GQ F++FR QF  +ER+FGY+R+  GDEMS+R KF+ +TW+G  VGVIQRAK+S DKAL+
Sbjct: 61  GQCFEEFRQQFGDNERAFGYIRIQMGDEMSKRKKFIFLTWIGQNVGVIQRAKMSTDKALI 120

Query: 132 KSVIT 136
           K V+ 
Sbjct: 121 KDVLN 125

Source: Glossina morsitans morsitans

Species: Glossina morsitans

Genus: Glossina

Family: Glossinidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|194769436|ref|XP_001966810.1| GF19083 [Drosophila ananassae] gi|190618331|gb|EDV33855.1| GF19083 [Drosophila ananassae]

 Score =  144 bits (362), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 69/125 (55%), Positives = 90/125 (72%), Gaps = 2/125 (1%)

Query: 14  MSDLIDMS--VPMTPRKCVCPTTLDSKSIKSAYEDVRSDASQTQWAVFKYQDSKISCTAR 71
           MSD I++   V   PR+    T+LD  SI+ AYEDVRSD + T+WAVFK+   +I   AR
Sbjct: 1   MSDGIEVEQIVESKPRRMPLATSLDKDSIREAYEDVRSDLTDTEWAVFKFDGPQIVVHAR 60

Query: 72  GQSFDKFRAQFRPDERSFGYLRMMTGDEMSRRLKFLLITWVGCEVGVIQRAKVSIDKALV 131
           GQ F++FR QF   ER+FGY+R+  GDEMS+R KF+ +TW+G EVGVIQRAK+S DKAL+
Sbjct: 61  GQCFEEFRQQFGDSERAFGYIRIQMGDEMSKRKKFIFLTWIGQEVGVIQRAKMSTDKALI 120

Query: 132 KSVIT 136
           K V+ 
Sbjct: 121 KDVLN 125

Source: Drosophila ananassae

Species: Drosophila ananassae

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|114051842|ref|NP_001040431.1| cyclic AMP-regulated protein [Bombyx mori] gi|95102866|gb|ABF51374.1| cyclic AMP-regulated protein [Bombyx mori]

 Score =  144 bits (362), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 64/115 (55%), Positives = 86/115 (74%)

Query: 22  VPMTPRKCVCPTTLDSKSIKSAYEDVRSDASQTQWAVFKYQDSKISCTARGQSFDKFRAQ 81
           V   PRK    T LD ++I++AYEDVRSD + T+WAVFK++ ++I C+ARG  F +FR Q
Sbjct: 11  VQNGPRKVTMTTGLDRETIRAAYEDVRSDTTPTEWAVFKFEGARIVCSARGSDFTEFRTQ 70

Query: 82  FRPDERSFGYLRMMTGDEMSRRLKFLLITWVGCEVGVIQRAKVSIDKALVKSVIT 136
           F  DER+FGYLR+  GDEMS+R KF+ +TWVG  V VI RAK+S DKA++K +I+
Sbjct: 71  FSDDERAFGYLRLQMGDEMSKRKKFMFMTWVGPNVSVINRAKMSTDKAIIKDIIS 125

Source: Bombyx mori

Species: Bombyx mori

Genus: Bombyx

Family: Bombycidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|24643106|ref|NP_573323.1| CG6891, isoform A [Drosophila melanogaster] gi|194892674|ref|XP_001977705.1| GG19183 [Drosophila erecta] gi|195345531|ref|XP_002039322.1| GM22913 [Drosophila sechellia] gi|195481479|ref|XP_002101662.1| GE17746 [Drosophila yakuba] gi|195567577|ref|XP_002107336.1| GD17404 [Drosophila simulans] gi|7293507|gb|AAF48881.1| CG6891, isoform A [Drosophila melanogaster] gi|190649354|gb|EDV46632.1| GG19183 [Drosophila erecta] gi|194134548|gb|EDW56064.1| GM22913 [Drosophila sechellia] gi|194189186|gb|EDX02770.1| GE17746 [Drosophila yakuba] gi|194204742|gb|EDX18318.1| GD17404 [Drosophila simulans]

 Score =  143 bits (361), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 68/125 (54%), Positives = 91/125 (72%), Gaps = 2/125 (1%)

Query: 14  MSDLIDMS--VPMTPRKCVCPTTLDSKSIKSAYEDVRSDASQTQWAVFKYQDSKISCTAR 71
           MSD I++   V   PR+    T+L+  SI+ AYEDVRSD + T+WAVFK+  ++I   AR
Sbjct: 1   MSDGIEVEQLVESKPRRMPLATSLEKDSIREAYEDVRSDLTDTEWAVFKFDGAQIIVHAR 60

Query: 72  GQSFDKFRAQFRPDERSFGYLRMMTGDEMSRRLKFLLITWVGCEVGVIQRAKVSIDKALV 131
           GQ F++FR QF   ER+FGY+R+  GDEMS+R KF+ +TW+G EVGVIQRAK+S DKAL+
Sbjct: 61  GQCFEEFRQQFGDSERAFGYIRIQMGDEMSKRKKFIFLTWIGQEVGVIQRAKMSTDKALI 120

Query: 132 KSVIT 136
           K V+ 
Sbjct: 121 KDVLN 125

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195403221|ref|XP_002060193.1| GJ18476 [Drosophila virilis] gi|194141037|gb|EDW57463.1| GJ18476 [Drosophila virilis]

 Score =  143 bits (360), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 67/125 (53%), Positives = 90/125 (72%), Gaps = 2/125 (1%)

Query: 14  MSDLIDMS--VPMTPRKCVCPTTLDSKSIKSAYEDVRSDASQTQWAVFKYQDSKISCTAR 71
           MSD I++   V   PR+    T+LD  +I+ AYEDVRSD + T+WAVFK+  ++I    R
Sbjct: 1   MSDGIEVEQIVESKPRRMPLATSLDKDAIREAYEDVRSDLTDTEWAVFKFDGAQIIVHGR 60

Query: 72  GQSFDKFRAQFRPDERSFGYLRMMTGDEMSRRLKFLLITWVGCEVGVIQRAKVSIDKALV 131
           GQ F++FR QF   ER+FGY+R+  GDEMS+R KF+ +TW+G EVGVIQRAK+S DKAL+
Sbjct: 61  GQCFEQFREQFGDSERAFGYIRIQMGDEMSKRKKFIFLTWIGQEVGVIQRAKMSTDKALI 120

Query: 132 KSVIT 136
           K V+ 
Sbjct: 121 KDVLN 125

Source: Drosophila virilis

Species: Drosophila virilis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157123252|ref|XP_001660081.1| hypothetical protein AaeL_AAEL009467 [Aedes aegypti] gi|108874433|gb|EAT38658.1| AAEL009467-PA [Aedes aegypti]

 Score =  142 bits (359), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 63/125 (50%), Positives = 91/125 (72%), Gaps = 2/125 (1%)

Query: 14  MSDLIDMS--VPMTPRKCVCPTTLDSKSIKSAYEDVRSDASQTQWAVFKYQDSKISCTAR 71
           MS+ +++   +   PRK   PT+LD  +I+ AYEDVRS+ +  +WAVFK+   KI C+ +
Sbjct: 1   MSEAVEVEQIIETKPRKMALPTSLDKDAIREAYEDVRSNLTDNEWAVFKFDGLKIVCSEK 60

Query: 72  GQSFDKFRAQFRPDERSFGYLRMMTGDEMSRRLKFLLITWVGCEVGVIQRAKVSIDKALV 131
           G  FD+F AQF  +ER+FGY+R+  GDEMS+R KF+ +TW+G EVGV+QRAK+S DK+++
Sbjct: 61  GIGFDEFCAQFHDNERAFGYIRIQMGDEMSKRSKFMFVTWIGPEVGVMQRAKMSTDKSII 120

Query: 132 KSVIT 136
           K VI 
Sbjct: 121 KDVIN 125

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|389608847|dbj|BAM18035.1| similar to CG6891 [Papilio xuthus] gi|389610993|dbj|BAM19107.1| simila to CG6891 [Papilio polytes]

 Score =  142 bits (359), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 64/115 (55%), Positives = 84/115 (73%)

Query: 22  VPMTPRKCVCPTTLDSKSIKSAYEDVRSDASQTQWAVFKYQDSKISCTARGQSFDKFRAQ 81
           V   P+K    T LD  +I++AYEDVRSD + T+WAVFK++ S+I C+ARG  F +FR Q
Sbjct: 12  VQNGPKKVAMTTGLDRDTIRAAYEDVRSDGTPTEWAVFKFEGSRIVCSARGSDFTEFRKQ 71

Query: 82  FRPDERSFGYLRMMTGDEMSRRLKFLLITWVGCEVGVIQRAKVSIDKALVKSVIT 136
           F  DER+FGYLR+  GDEMS+R KF+ + WVG  V VI RAK+S DKA+VK +I+
Sbjct: 72  FADDERAFGYLRLQMGDEMSKRRKFMFVAWVGPNVSVINRAKMSTDKAIVKDIIS 126

Source: Papilio xuthus

Species: Papilio xuthus

Genus: Papilio

Family: Papilionidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195134618|ref|XP_002011734.1| GI11191 [Drosophila mojavensis] gi|193906857|gb|EDW05724.1| GI11191 [Drosophila mojavensis]

 Score =  142 bits (357), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 66/125 (52%), Positives = 90/125 (72%), Gaps = 2/125 (1%)

Query: 14  MSDLIDMS--VPMTPRKCVCPTTLDSKSIKSAYEDVRSDASQTQWAVFKYQDSKISCTAR 71
           MSD I++   V   P++    T+LD  +I+ AYEDVRSD + T+WAVFK+  ++I    R
Sbjct: 1   MSDGIEVEQIVESKPKRMPVATSLDKDAIREAYEDVRSDLTDTEWAVFKFDGAQIIVHGR 60

Query: 72  GQSFDKFRAQFRPDERSFGYLRMMTGDEMSRRLKFLLITWVGCEVGVIQRAKVSIDKALV 131
           GQ F++FR QF   ER+FGY+R+  GDEMS+R KF+ +TW+G EVGVIQRAK+S DKAL+
Sbjct: 61  GQCFEQFREQFGDSERAFGYIRIQMGDEMSKRKKFIFLTWIGQEVGVIQRAKMSTDKALI 120

Query: 132 KSVIT 136
           K V+ 
Sbjct: 121 KDVLN 125

Source: Drosophila mojavensis

Species: Drosophila mojavensis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195041108|ref|XP_001991194.1| GH12531 [Drosophila grimshawi] gi|193900952|gb|EDV99818.1| GH12531 [Drosophila grimshawi]

 Score =  141 bits (356), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 66/125 (52%), Positives = 90/125 (72%), Gaps = 2/125 (1%)

Query: 14  MSDLIDMS--VPMTPRKCVCPTTLDSKSIKSAYEDVRSDASQTQWAVFKYQDSKISCTAR 71
           MSD I++   V   PR+    T++D  +I+ AYEDVRSD + T+WAVFK+  ++I    R
Sbjct: 1   MSDGIEVEQIVETKPRRMPQATSVDKDAIREAYEDVRSDLTDTEWAVFKFDGAQIIVHGR 60

Query: 72  GQSFDKFRAQFRPDERSFGYLRMMTGDEMSRRLKFLLITWVGCEVGVIQRAKVSIDKALV 131
           GQ F++FR QF   ER+FGY+R+  GDEMS+R KF+ +TW+G EVGVIQRAK+S DKAL+
Sbjct: 61  GQCFEQFREQFGDSERAFGYIRIQMGDEMSKRKKFIFLTWIGQEVGVIQRAKMSTDKALI 120

Query: 132 KSVIT 136
           K V+ 
Sbjct: 121 KDVLN 125

Source: Drosophila grimshawi

Species: Drosophila grimshawi

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	143
FB|FBgn0030955	269	CG6891 [Drosophila melanogaste	0.853	0.453	0.548	7.7e-32
ZFIN|ZDB-GENE-030131-8325	142	cotl1 "coactosin-like 1 (Dicty	0.762	0.767	0.454	2.4e-21
UNIPROTKB|F1NFH2	142	COTL1 "Uncharacterized protein	0.720	0.725	0.436	2.5e-19
UNIPROTKB|Q2HJ57	142	COTL1 "Coactosin-like protein"	0.720	0.725	0.436	4.6e-18
UNIPROTKB|Q14019	142	COTL1 "Coactosin-like protein"	0.720	0.725	0.436	5.8e-18
RGD|1305498	142	Cotl1 "coactosin-like 1 (Dicty	0.720	0.725	0.427	7.5e-18
UNIPROTKB|I3LI44	137	COTL1 "Uncharacterized protein	0.699	0.729	0.44	2e-17
MGI|MGI:1919292	142	Cotl1 "coactosin-like 1 (Dicty	0.720	0.725	0.417	2e-17
DICTYBASE|DDB_G0293898	146	coaA "actin binding protein" [	0.706	0.691	0.403	4.1e-17
UNIPROTKB|J9P0X7	123	COTL1 "Uncharacterized protein	0.601	0.699	0.453	2.3e-14

FB|FBgn0030955 CG6891 [Drosophila melanogaster (taxid:7227)]

 Score = 349 (127.9 bits), Expect = 7.7e-32, P = 7.7e-32
 Identities = 68/124 (54%), Positives = 91/124 (73%)

Query:    14 MSDLIDMS--VPMTPRKCVCPTTLDSKSIKSAYEDVRSDASQTQWAVFKYQDSKISCTAR 71
             MSD I++   V   PR+    T+L+  SI+ AYEDVRSD + T+WAVFK+  ++I   AR
Sbjct:   107 MSDGIEVEQLVESKPRRMPLATSLEKDSIREAYEDVRSDLTDTEWAVFKFDGAQIIVHAR 166

Query:    72 GQSFDKFRAQFRPDERSFGYLRMMTGDEMSRRLKFLLITWVGCEVGVIQRAKVSIDKALV 131
             GQ F++FR QF   ER+FGY+R+  GDEMS+R KF+ +TW+G EVGVIQRAK+S DKAL+
Sbjct:   167 GQCFEEFRQQFGDSERAFGYIRIQMGDEMSKRKKFIFLTWIGQEVGVIQRAKMSTDKALI 226

Query:   132 KSVI 135
             K V+
Sbjct:   227 KDVL 230

GO:0005622 "intracellular" evidence=IEA

GO:0003779 "actin binding" evidence=IEA

ZFIN|ZDB-GENE-030131-8325 cotl1 "coactosin-like 1 (Dictyostelium)" [Danio rerio (taxid:7955)]

 Score = 250 (93.1 bits), Expect = 2.4e-21, P = 2.4e-21
 Identities = 50/110 (45%), Positives = 70/110 (63%)

Query:    33 TTLDSKSIKSAYEDVRSDASQTQWAVFKYQDSKISCTARGQSFDKFRAQFRPDERSFGYL 92
             T +D ++ + AY  VR D+S   WA FKY  S I     G  +++F++Q   D R FG++
Sbjct:     3 TRIDKEACREAYNLVRDDSSGICWACFKYDGSTIVPGGHGSDYEEFKSQCTVDSRVFGFV 62

Query:    93 RMMTGDEMSRRLKFLLITWVGCEVGVIQRAKVSIDKALVKSVI-TFKFKF 141
             R+MTGD MS+R KF  ITW+G  +  +QRAK+S DKALVK  + TF  +F
Sbjct:    63 RIMTGDAMSKRSKFTFITWIGENITGLQRAKISTDKALVKDAVPTFAKEF 112

GO:0005622 "intracellular" evidence=IEA

GO:0003779 "actin binding" evidence=IEA

UNIPROTKB|F1NFH2 COTL1 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 231 (86.4 bits), Expect = 2.5e-19, P = 2.5e-19
 Identities = 45/103 (43%), Positives = 62/103 (60%)

Query:    33 TTLDSKSIKSAYEDVRSDASQTQWAVFKYQDSKISCTARGQSFDKFRAQFRPDERSFGYL 92
             T +D ++ + AY  VR DA++  W  FKY  S I    +G  ++ F+ +   D R FG  
Sbjct:     3 TKIDKEACREAYNLVRDDATEVNWVTFKYNGSTIVPGDQGVDYETFKRKCTDDVRLFGLF 62

Query:    93 RMMTGDEMSRRLKFLLITWVGCEVGVIQRAKVSIDKALVKSVI 135
             R  TGD MS+R+KF LITW+G +V  +QRAK   DK LVK V+
Sbjct:    63 RFTTGDAMSKRVKFALITWIGEDVSGLQRAKTGTDKTLVKEVV 105

GO:0005622 "intracellular" evidence=IEA

GO:0003779 "actin binding" evidence=IEA

GO:0019899 "enzyme binding" evidence=IEA

GO:0050832 "defense response to fungus" evidence=IEA

UNIPROTKB|Q2HJ57 COTL1 "Coactosin-like protein" [Bos taurus (taxid:9913)]

 Score = 219 (82.2 bits), Expect = 4.6e-18, P = 4.6e-18
 Identities = 45/103 (43%), Positives = 59/103 (57%)

Query:    33 TTLDSKSIKSAYEDVRSDASQTQWAVFKYQDSKISCTARGQSFDKFRAQFRPDERSFGYL 92
             T +D ++ ++AY  VR D+S   W  FKY  S I    +G  +  F  Q   D R F ++
Sbjct:     3 TKIDKEACRTAYNLVRDDSSAVIWVTFKYDGSTIVPGEQGAEYQDFIQQCTDDVRLFAFV 62

Query:    93 RMMTGDEMSRRLKFLLITWVGCEVGVIQRAKVSIDKALVKSVI 135
             R  TGD MS+R KF LITW+G  V  +QRAK   DK LVK V+
Sbjct:    63 RFTTGDAMSKRSKFALITWIGENVSGLQRAKTGTDKTLVKEVV 105

GO:0005856 "cytoskeleton" evidence=IEA

GO:0050832 "defense response to fungus" evidence=IEA

GO:0019899 "enzyme binding" evidence=IEA

GO:0003779 "actin binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

UNIPROTKB|Q14019 COTL1 "Coactosin-like protein" [Homo sapiens (taxid:9606)]

 Score = 218 (81.8 bits), Expect = 5.8e-18, P = 5.8e-18
 Identities = 45/103 (43%), Positives = 58/103 (56%)

Query:    33 TTLDSKSIKSAYEDVRSDASQTQWAVFKYQDSKISCTARGQSFDKFRAQFRPDERSFGYL 92
             T +D ++ ++AY  VR D S   W  FKY  S I    +G  +  F  Q   D R F ++
Sbjct:     3 TKIDKEACRAAYNLVRDDGSAVIWVTFKYDGSTIVPGEQGAEYQHFIQQCTDDVRLFAFV 62

Query:    93 RMMTGDEMSRRLKFLLITWVGCEVGVIQRAKVSIDKALVKSVI 135
             R  TGD MS+R KF LITW+G  V  +QRAK   DK LVK V+
Sbjct:    63 RFTTGDAMSKRSKFALITWIGENVSGLQRAKTGTDKTLVKEVV 105

GO:0005737 "cytoplasm" evidence=IEA

GO:0050832 "defense response to fungus" evidence=IEA

GO:0005856 "cytoskeleton" evidence=IEA

GO:0031965 "nuclear membrane" evidence=IEA

GO:0019899 "enzyme binding" evidence=IPI

GO:0008150 "biological_process" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0003779 "actin binding" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

RGD|1305498 Cotl1 "coactosin-like 1 (Dictyostelium)" [Rattus norvegicus (taxid:10116)]

 Score = 217 (81.4 bits), Expect = 7.5e-18, P = 7.5e-18
 Identities = 44/103 (42%), Positives = 59/103 (57%)

Query:    33 TTLDSKSIKSAYEDVRSDASQTQWAVFKYQDSKISCTARGQSFDKFRAQFRPDERSFGYL 92
             T +D ++ ++AY  VR D S   W  FKY  + I    +G  +  F  Q   D R F ++
Sbjct:     3 TKIDKEACRAAYNLVRDDGSSVIWVTFKYDGATIVPGDQGADYQHFIQQCTDDVRLFAFV 62

Query:    93 RMMTGDEMSRRLKFLLITWVGCEVGVIQRAKVSIDKALVKSVI 135
             R  TGD MS+R KF LITW+G +V  +QRAK   DK LVK V+
Sbjct:    63 RFTTGDAMSKRSKFALITWIGEDVSGLQRAKTGTDKTLVKEVV 105

GO:0003779 "actin binding" evidence=IEA;ISO

GO:0005737 "cytoplasm" evidence=IEA

GO:0005856 "cytoskeleton" evidence=IEA

GO:0019899 "enzyme binding" evidence=IEA;ISO

GO:0050832 "defense response to fungus" evidence=IEA;ISO

UNIPROTKB|I3LI44 COTL1 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 213 (80.0 bits), Expect = 2.0e-17, P = 2.0e-17
 Identities = 44/100 (44%), Positives = 57/100 (57%)

Query:    36 DSKSIKSAYEDVRSDASQTQWAVFKYQDSKISCTARGQSFDKFRAQFRPDERSFGYLRMM 95
             D ++ ++AY  VR D+S   W  FKY  S I    +G  +  F  Q   D R F ++R  
Sbjct:     1 DKEACRTAYNLVRDDSSAVIWVTFKYDGSTIVPGEQGAEYQDFIQQCTDDVRLFAFVRFT 60

Query:    96 TGDEMSRRLKFLLITWVGCEVGVIQRAKVSIDKALVKSVI 135
             TGD MS+R KF LITW+G  V  +QRAK   DK LVK V+
Sbjct:    61 TGDAMSKRSKFALITWIGENVSGLQRAKTGTDKTLVKEVV 100

GO:0050832 "defense response to fungus" evidence=IEA

GO:0019899 "enzyme binding" evidence=IEA

GO:0003779 "actin binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

MGI|MGI:1919292 Cotl1 "coactosin-like 1 (Dictyostelium)" [Mus musculus (taxid:10090)]

 Score = 213 (80.0 bits), Expect = 2.0e-17, P = 2.0e-17
 Identities = 43/103 (41%), Positives = 59/103 (57%)

Query:    33 TTLDSKSIKSAYEDVRSDASQTQWAVFKYQDSKISCTARGQSFDKFRAQFRPDERSFGYL 92
             T +D ++ ++AY  VR D S   W  F+Y  + I    +G  +  F  Q   D R F ++
Sbjct:     3 TKIDKEACRAAYNLVRDDGSAVIWVTFRYDGATIVPGDQGADYQHFIQQCTDDVRLFAFV 62

Query:    93 RMMTGDEMSRRLKFLLITWVGCEVGVIQRAKVSIDKALVKSVI 135
             R  TGD MS+R KF LITW+G +V  +QRAK   DK LVK V+
Sbjct:    63 RFTTGDAMSKRSKFALITWIGEDVSGLQRAKTGTDKTLVKEVV 105

GO:0003779 "actin binding" evidence=ISO;IDA

GO:0005515 "protein binding" evidence=IPI

GO:0005575 "cellular_component" evidence=ND

GO:0005622 "intracellular" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005856 "cytoskeleton" evidence=IEA

GO:0019899 "enzyme binding" evidence=ISO;IPI

GO:0050832 "defense response to fungus" evidence=IDA

DICTYBASE|DDB_G0293898 coaA "actin binding protein" [Dictyostelium discoideum (taxid:44689)]

 Score = 210 (79.0 bits), Expect = 4.1e-17, P = 4.1e-17
 Identities = 42/104 (40%), Positives = 69/104 (66%)

Query:    35 LDSKSIKSAYEDVRSDASQTQWAVFKYQD-SKISCTARGQS-FDKFRAQF-RPDERSFGY 91
             + S  +K+AY++V +D++ T W +FKY+  +KI  + +G   F +   +  +P ER + Y
Sbjct:     4 VSSTELKAAYDEVLADSNDTNWCLFKYEGKNKIVLSGKGSGGFAELAQEINQPSERLYAY 63

Query:    92 LRMMTGDEMSRRLKFLLITWVGCEVGVIQRAKVSIDKALVKSVI 135
             LR+++GD+ S+R KF+ I+W G EVG + +A VS+ KA VK VI
Sbjct:    64 LRVVSGDDESKRSKFVFISWCGEEVGPLAKANVSVHKASVKQVI 107

GO:0045335 "phagocytic vesicle" evidence=IDA

GO:0009617 "response to bacterium" evidence=IEP

GO:0030833 "regulation of actin filament polymerization" evidence=IDA

GO:0051015 "actin filament binding" evidence=IDA

GO:0015629 "actin cytoskeleton" evidence=IC

GO:0005622 "intracellular" evidence=IEA

GO:0003779 "actin binding" evidence=IEA

GO:0005856 "cytoskeleton" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0044351 "macropinocytosis" evidence=RCA

UNIPROTKB|J9P0X7 COTL1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 184 (69.8 bits), Expect = 2.3e-14, P = 2.3e-14
 Identities = 39/86 (45%), Positives = 47/86 (54%)

Query:    50 DASQTQWAVFKYQDSKISCTARGQSFDKFRAQFRPDERSFGYLRMMTGDEMSRRLKFLLI 109
             D S   W  FKY  S I    +G  +  F  Q   D R F ++R  TGD MS+R KF LI
Sbjct:     1 DGSAVIWVTFKYDGSTIVPGDQGADYQDFIQQCTDDIRLFAFVRFTTGDAMSKRSKFALI 60

Query:   110 TWVGCEVGVIQRAKVSIDKALVKSVI 135
             TW+G  V  +QRAK   DK LVK V+
Sbjct:    61 TWIGENVSGLQRAKTGTDKTLVKEVV 86

GO:0005622 "intracellular" evidence=IEA

GO:0003779 "actin binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9CQI6	COTL1_MOUSE	No assigned EC number	0.4134	0.7272	0.7323	yes	N/A
Q2HJ57	COTL1_BOVIN	No assigned EC number	0.4326	0.7272	0.7323	yes	N/A
B0BNA5	COTL1_RAT	No assigned EC number	0.4230	0.7272	0.7323	yes	N/A
Q14019	COTL1_HUMAN	No assigned EC number	0.4326	0.7272	0.7323	yes	N/A
P34121	COAA_DICDI	No assigned EC number	0.4038	0.7062	0.6917	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	143
cd11282	114	cd11282, ADF_coactosin_like, Coactosin-like member	4e-34
smart00102	127	smart00102, ADF, Actin depolymerisation factor/cof	5e-08
cd11281	136	cd11281, ADF_drebrin_like, ADF homology domain of	7e-08
pfam00241	127	pfam00241, Cofilin_ADF, Cofilin/tropomyosin-type a	3e-04
cd00013	97	cd00013, ADF_gelsolin, Actin depolymerization fact	4e-04

>gnl|CDD|200438 cd11282, ADF_coactosin_like, Coactosin-like members of the ADF homology domain family

 Score =  114 bits (288), Expect = 4e-34
 Identities = 44/99 (44%), Positives = 59/99 (59%), Gaps = 2/99 (2%)

Query: 39  SIKSAYEDVRSDASQTQWAVFKYQDS-KISCTARGQSF-DKFRAQFRPDERSFGYLRMMT 96
            I+ AY DVRSD S T W +  Y+ S  +     G    D+ +AQ   DE  FGY+R+  
Sbjct: 1   EIREAYNDVRSDVSDTNWVLLGYESSNTLVLRGSGSGGIDELKAQLPDDEVLFGYVRITL 60

Query: 97  GDEMSRRLKFLLITWVGCEVGVIQRAKVSIDKALVKSVI 135
           GD  S+R KF+ ITW+G  V V++RAKVS+ K  VK V+
Sbjct: 61  GDGESKRSKFVFITWIGENVSVLRRAKVSVHKGDVKEVL 99

Actin depolymerization factor/cofilin-like domains (ADF domains) are present in a family of essential eukaryotic actin regulatory proteins. Many of these proteins enhance the turnover rate of actin and interact with actin monomers as well as actin filaments. The function of coactosins is not well understood. They appear to interfere with the capping of actin filaments in Dictyostelium, and may not be able to bind monomeric globular actin. A role for coactosins as chaperones stabilizing 5-lipoxygenase (5LO) has been suggested; 5LO plays a crucial role in leukotriene synthesis. Length = 114

>gnl|CDD|214516 smart00102, ADF, Actin depolymerisation factor/cofilin -like domains

 Score = 48.0 bits (115), Expect = 5e-08
 Identities = 17/99 (17%), Positives = 37/99 (37%), Gaps = 4/99 (4%)

Query: 41  KSAYEDVRSD--ASQTQWAVFKYQDSKI--SCTARGQSFDKFRAQFRPDERSFGYLRMMT 96
           K A+ +++     S   + + K  +  +     +   S+D+F  +   DE  +       
Sbjct: 4   KEAFNELKKKRKHSAIIFKIDKDNEEIVVEEVGSTEDSYDEFVEELPEDECRYALYDYKF 63

Query: 97  GDEMSRRLKFLLITWVGCEVGVIQRAKVSIDKALVKSVI 135
             E S++ K + I W      V  +   +  K  +K  +
Sbjct: 64  TTEESKKSKIVFIFWSPDGAPVKSKMLYASSKDTLKKEL 102

Severs actin filaments and binds to actin monomers. Length = 127

>gnl|CDD|200437 cd11281, ADF_drebrin_like, ADF homology domain of drebrin and actin-binding protein 1 (abp1)

 Score = 48.0 bits (115), Expect = 7e-08
 Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 9/82 (10%)

Query: 37  SKSIKSAYEDVRSDASQTQWAVFKYQDS----KISCTARGQSFDKFRAQFRPDERSFGYL 92
           S  I +AYEDV    S T WA+F Y+      K++ T  G   ++   +F   +  +G+ 
Sbjct: 7   SPEILAAYEDVVDGKSSTDWALFTYEGKSNDLKVADTGDG-GLEELVEEFSDGKVQYGFA 65

Query: 93  RM-MTGDEMSRRLKFLLITWVG 113
           R+      +    KF+LI W G
Sbjct: 66  RVKDPNSGLP---KFVLINWCG 84

Actin depolymerization factor/cofilin-like domains (ADF domains) are present in a family of essential eukaryotic actin regulatory proteins. Many of these proteins enhance the turnover rate of actin and interact with actin monomers as well as actin filaments. Abp1 and drebrin (developmentally regulated brain protein) are multidomain proteins with an N-terminal ADF homology domain and one or more C-terminal SH3 domains. They have been shown to interact with polymeric F-actin, but not with monomeric G-actin, and do not appear to promote the disassembly of actin filaments. Drebrin rather stabilizes actin filaments by inducing changes in the helical twist and may promote or interfere with the interactions of other proteins with actin filaments. Length = 136

>gnl|CDD|143992 pfam00241, Cofilin_ADF, Cofilin/tropomyosin-type actin-binding protein

 Score = 37.7 bits (88), Expect = 3e-04
 Identities = 16/103 (15%), Positives = 40/103 (38%), Gaps = 10/103 (9%)

Query: 41  KSAYEDVRSDASQTQWAVFKYQDSK-----ISCTARGQSFDKFRAQFRPDERSFGYLRMM 95
           K+++ +++    +  + +FK    K           G S+D+F  +    E  +    + 
Sbjct: 4   KASFNELKKR-KKHNYIIFKIDKDKDQIVVEQVGDTGDSYDEFVEELPERECRYAVYDVE 62

Query: 96  TGDEMSRRLKFLLITWVGCEVG--VIQRAKVSIDKALVKSVIT 136
              + S++ K + ++W     G  V  +   +  K  +K  + 
Sbjct: 63  YTTDGSKKSKIVFVSW--SPDGAPVKSKMLYASSKDALKRALG 103

Severs actin filaments and binds to actin monomers. Length = 127

>gnl|CDD|200435 cd00013, ADF_gelsolin, Actin depolymerization factor/cofilin- and gelsolin-like domains

 Score = 37.1 bits (86), Expect = 4e-04
 Identities = 19/84 (22%), Positives = 34/84 (40%), Gaps = 7/84 (8%)

Query: 56  WAVFKYQDSK-----ISCTARGQSFDKFRAQFRPDERSFGYLRMMTGDEMSRRLKFLLIT 110
           W +FK    K      S  A     D+F  +   D+  + + R        +R KF+ I+
Sbjct: 2   WVLFKVDAKKEEIVVGSTGAGFL--DEFLEELPEDDPRYAFYRFKYPHSDDKRSKFVFIS 59

Query: 111 WVGCEVGVIQRAKVSIDKALVKSV 134
           W+   V + Q+   + +K  +K  
Sbjct: 60  WIPDGVSIKQKMVYATNKQTLKEA 83

Actin depolymerization factor/cofilin-like domains are present in a family of essential eukaryotic actin regulatory proteins; these proteins enhance the turnover rate of actin and interact with actin monomers as well as actin filaments. Length = 97

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	143
KOG3655|consensus	484		99.94
PF00241	127	Cofilin_ADF: Cofilin/tropomyosin-type actin-bindin	99.9
cd00013	132	ADF Actin depolymerisation factor/cofilin -like do	99.89
smart00102	127	ADF Actin depolymerisation factor/cofilin -like do	99.85
PLN03216	141	actin depolymerizing factor; Provisional	99.85
PTZ00152	122	cofilin/actin-depolymerizing factor 1-like protein	99.7
KOG1735|consensus	146		99.59
KOG1747|consensus	342		98.37
KOG1747|consensus	342		98.32
KOG1736|consensus	143		97.24

>KOG3655|consensus

Probab=99.94  E-value=7.9e-27  Score=201.61  Aligned_cols=110  Identities=34%  Similarity=0.592  Sum_probs=105.1

Q ss_pred             eccccccChHHHHHHHHHHHcCCCCccEEEEEeeCC--eEEEeeecC-CHHHHHhccCCCceEEEEEEeEeCCCCcceee
Q psy17893         29 CVCPTTLDSKSIKSAYEDVRSDASQTQWAVFKYQDS--KISCTARGQ-SFDKFRAQFRPDERSFGYLRMMTGDEMSRRLK  105 (143)
Q Consensus        29 ~~m~~~~~~~~i~~A~~~Vr~d~~~~nWilf~y~~~--~l~l~~~G~-Gl~El~~~L~dd~v~Ygl~Rv~~~d~~s~r~K  105 (143)
                      |+|.+..+..+|++||+.|++|.+.++|+||+|+|+  .|.+.++|. |++||.+.|..++++||++||.  |.++++.|
T Consensus         2 ~~l~~~~~~aei~aaY~~v~~d~~dt~WaiF~Yeg~s~~~~~~~s~~~~~~e~~~df~~~kv~yg~~rv~--D~~s~l~K   79 (484)
T KOG3655|consen    2 MPLNTTTHGAEIRAAYERVVDDSSDTDWALFTYEGNSNDLKVAGSGEGGLEEFLGDFDSGKVMYGFCRVK--DPMSGLPK   79 (484)
T ss_pred             CcccccccHHHHHHHHHHhhccCCCceeEEEeecCCccceeeeccccccHHHHhhhcccCceeEEEEEec--CcccCCcc
Confidence            788899999999999999999999999999999997  678888888 8999999999999999999997  99999999


Q ss_pred             EEEEEeecCCcccccceeeeecHHHHHhhccCCcc
Q psy17893        106 FLLITWVGCEVGVIQRAKVSIDKALVKSVITFKFK  140 (143)
Q Consensus       106 fVfI~WiGe~V~~~~Kar~s~hk~~Vk~~~~~yh~  140 (143)
                      ||||+|||++|+.++||++++|+..|+++|++||-
T Consensus        80 fvLI~W~GE~vp~~Rka~~ath~a~v~~~lkg~hV  114 (484)
T KOG3655|consen   80 FVLINWIGEGVPVLRKAKCATHKALVKNFLKGFHV  114 (484)
T ss_pred             eEEEEecCCccHHHhhhhhcchHHHHHHHhhcceE
Confidence            99999999999999999999999999999999994

>PF00241 Cofilin_ADF: Cofilin/tropomyosin-type actin-binding protein; InterPro: IPR002108 The actin-depolymerising factor homology (ADF-H) domain is an ~150-amino acid motif that is present in three phylogenetically distinct classes of eukaryotic actin-binding proteins [, , ]: ADF/cofilins, which include ADF, cofilin, destrin, actophorin, coactosin, depactin and glia maturation factors (GMFs) beta and gamma

Probab=99.90  E-value=6.1e-24  Score=154.63  Aligned_cols=101  Identities=27%  Similarity=0.419  Sum_probs=93.7

Q ss_pred             HHHHHHHHHHHcCCCCccEEEEEeeCC--eEEEeeec--C-CHHHHHhccCCCceEEEEEEeEeCCCCcceeeEEEEEee
Q psy17893         38 KSIKSAYEDVRSDASQTQWAVFKYQDS--KISCTARG--Q-SFDKFRAQFRPDERSFGYLRMMTGDEMSRRLKFLLITWV  112 (143)
Q Consensus        38 ~~i~~A~~~Vr~d~~~~nWilf~y~~~--~l~l~~~G--~-Gl~El~~~L~dd~v~Ygl~Rv~~~d~~s~r~KfVfI~Wi  112 (143)
                      |+|.+||++++.+++ ++|++|+|+++  .|++..+|  . +++||.++|++++++|+++|+....+++.+.|+|||.||
T Consensus         1 ~e~~~~~~~~~~~~~-~~~i~~~i~~~~~~i~v~~~g~~~~~~~el~~~l~~~~p~y~~~~~~~~~~~~~~~k~vfI~w~   79 (127)
T PF00241_consen    1 DECKAAFQELKSKKS-TRWIIFKIDDEKEEIVVEKSGSEGGSFDELLSHLPDDEPRYILYRFEYTHKGSRRSKLVFIYWC   79 (127)
T ss_dssp             HHHHHHHHHHHTTTS-CSEEEEEEETTSTEEEEEEEEEESSHHHHHHHCSCTTSEEEEEEEEEEEETTSEEEEEEEEEEE
T ss_pred             CHHHHHHHHHHcCCC-ceEEEEEEeCCCcEEEEEeccCCCCCHHHHHHhcccCCcEEEEEEeeecccCCCCceEEEEEEe
Confidence            689999999999876 99999999986  79999998  4 799999999999999999999966568899999999999


Q ss_pred             cCCcccccceeeeecHHHHHhhccCCc
Q psy17893        113 GCEVGVIQRAKVSIDKALVKSVITFKF  139 (143)
Q Consensus       113 Ge~V~~~~Kar~s~hk~~Vk~~~~~yh  139 (143)
                      |+++|+..||.|++|++.|++.|+++|
T Consensus        80 P~~~~vk~km~yas~k~~l~~~l~~~~  106 (127)
T PF00241_consen   80 PDNAPVKEKMLYASSKASLKKKLGGIH  106 (127)
T ss_dssp             STTS-HHHHHHHHHHHHHHHHHCTTEE
T ss_pred             cCCccHHHhhhhHHhHHHHHHHhCCce
Confidence            999999999999999999999999977

ADF/cofilins are small actin-binding proteins composed of a single ADF-H domain. They bind both actin-monomers and filaments and promote rapid filament turnover in cells by depolymerising/fragmenting actin filaments. ADF/cofilins bind ADP-actin with higher affinity than ATP-actin and inhibit the spontaneous nucleotide exchange on actin monomers Twinfilins, which are actin monomer-binding proteins that are composed of two ADF-H domains Abp1/Drebrins, which are relatively large proteins composed of an N-terminal ADF-H domain followed by a variable region and a C-terminal SH3 domain. Abp1/Drebrins interact only with actin filaments and do not promote filament depolymerisation or fragmentation Although these proteins are biochemically distinct and play different roles in actin dynamics, they all appear to use the ADF-H domain for their interactions with actin. The ADF-H domain consists of a six-stranded mixed beta-sheet in which the four central strands (beta2-beta5) are anti-parallel and the two edge strands (beta1 and beta6) run parallel with the neighbouring strands. The sheet is surrounded by two alpha-helices on each side [, , ].; GO: 0003779 actin binding, 0005622 intracellular; PDB: 1AK6_A 1AK7_A 1V6F_A 2L72_A 1CFY_A 1QPV_A 1COF_A 1TVJ_A 1X67_A 3L50_A ....

>cd00013 ADF Actin depolymerisation factor/cofilin -like domains; present in a family of essential eukaryotic actin regulatory proteins; these proteins enhance the turnover rate of actin and interact with actin monomers as well as actin filaments

Probab=99.89  E-value=5.2e-23  Score=150.41  Aligned_cols=104  Identities=26%  Similarity=0.386  Sum_probs=95.5

Q ss_pred             ChHHHHHHHHHHHcCCCCccEEEEEeeC--CeEEEeeecC---CHHHHHhccCCCceEEEEEEeEeCCCCcceeeEEEEE
Q psy17893         36 DSKSIKSAYEDVRSDASQTQWAVFKYQD--SKISCTARGQ---SFDKFRAQFRPDERSFGYLRMMTGDEMSRRLKFLLIT  110 (143)
Q Consensus        36 ~~~~i~~A~~~Vr~d~~~~nWilf~y~~--~~l~l~~~G~---Gl~El~~~L~dd~v~Ygl~Rv~~~d~~s~r~KfVfI~  110 (143)
                      -++++.+||++++.++ ..+|++|+|++  ++|++.++|.   +++||+++|++++++|+++|+....+++.+.|+|||.
T Consensus         5 i~~e~~~a~~~~~~~~-~~~~vi~~i~~~~~~i~~~~~~~~~~~~~~l~~~l~~~~~~y~~~~~~~~~~~~~~~k~vfI~   83 (132)
T cd00013           5 VSDECKEAFEELKSGK-KTRWIIFKIDDDKKEIVVEKTGEGGESFDEFVEELPEDECRYALYDYDFTTEGSKKSKIVFIY   83 (132)
T ss_pred             ECHHHHHHHHHHHhCC-ceeEEEEEEcCCCCEEEEEecCCCCCCHHHHHHhCCcCCceEEEEEecccCCCccccCEEEEE
Confidence            3689999999999875 68999999998  4899999988   6999999999999999999998655578899999999


Q ss_pred             eecCCcccccceeeeecHHHHHhhccCCcc
Q psy17893        111 WVGCEVGVIQRAKVSIDKALVKSVITFKFK  140 (143)
Q Consensus       111 WiGe~V~~~~Kar~s~hk~~Vk~~~~~yh~  140 (143)
                      |||+++++..||.|++|++.+++.++++|+
T Consensus        84 w~P~~a~~k~km~yas~k~~l~~~l~~~~~  113 (132)
T cd00013          84 WSPETAPVKSKMLYASSKAALKRELVGIQV  113 (132)
T ss_pred             ECCCCCChhhhhhhHHHHHHHHHhcCCceE
Confidence            999999999999999999999999998865

>smart00102 ADF Actin depolymerisation factor/cofilin -like domains

Probab=99.85  E-value=2.8e-21  Score=141.40  Aligned_cols=102  Identities=19%  Similarity=0.279  Sum_probs=91.9

Q ss_pred             HHHHHHHHHHHcCCCCccEEEEEeeCC--eEEEeeecC---CHHHHHhccCCCceEEEEEEeEeCCCCcceeeEEEEEee
Q psy17893         38 KSIKSAYEDVRSDASQTQWAVFKYQDS--KISCTARGQ---SFDKFRAQFRPDERSFGYLRMMTGDEMSRRLKFLLITWV  112 (143)
Q Consensus        38 ~~i~~A~~~Vr~d~~~~nWilf~y~~~--~l~l~~~G~---Gl~El~~~L~dd~v~Ygl~Rv~~~d~~s~r~KfVfI~Wi  112 (143)
                      ++|.+||++++.++ ..+|++|.++++  +|+|..+|.   +++||++.|++++++|+++|+....+++++.|+|||.||
T Consensus         1 ~~~~~~~~~~~~~~-~~~~vi~~i~~~~~~i~v~~~~~~~~~~~el~~~l~~~~~ry~~~~~~~~~~~~~~~k~vfI~w~   79 (127)
T smart00102        1 EDCKEAFNELKKKR-KHSAIIFKIDKDNEEIVVEEVGSTEDSYDEFVEELPEDECRYALYDYKFTTEESKKSKIVFIFWS   79 (127)
T ss_pred             ChHHHHHHHHHcCC-CceEEEEEEecCCCEEEEEecCCCCCCHHHHHHhCCccCceEEEEEeecccCCCccccEEEEEEC
Confidence            47899999999865 489999999874  799988873   699999999999999999999965556889999999999


Q ss_pred             cCCcccccceeeeecHHHHHhhccCCcc
Q psy17893        113 GCEVGVIQRAKVSIDKALVKSVITFKFK  140 (143)
Q Consensus       113 Ge~V~~~~Kar~s~hk~~Vk~~~~~yh~  140 (143)
                      |+++++..||.|++|+..+++.|+++|.
T Consensus        80 P~~a~~~~km~yas~k~~l~~~l~~~~~  107 (127)
T smart00102       80 PDGAPVKSKMLYASSKDTLKKELGGIQV  107 (127)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHcCCceE
Confidence            9999999999999999999999998774

Severs actin filaments and binds to actin monomers.

>PLN03216 actin depolymerizing factor; Provisional

Probab=99.85  E-value=5.4e-21  Score=143.67  Aligned_cols=111  Identities=14%  Similarity=0.261  Sum_probs=97.4

Q ss_pred             eccccccChHHHHHHHHHHHcCCCCccEEEEEeeCC--eEEEeeecC---CHHHHHhccCCCceEEEEEEeE-eCCCCcc
Q psy17893         29 CVCPTTLDSKSIKSAYEDVRSDASQTQWAVFKYQDS--KISCTARGQ---SFDKFRAQFRPDERSFGYLRMM-TGDEMSR  102 (143)
Q Consensus        29 ~~m~~~~~~~~i~~A~~~Vr~d~~~~nWilf~y~~~--~l~l~~~G~---Gl~El~~~L~dd~v~Ygl~Rv~-~~d~~s~  102 (143)
                      |+++..--+++|.++|++++..+ ..+|++|.++++  .|+|..+|.   +++||.+.|++++++|+++|+. ..++++.
T Consensus         5 m~~SGi~v~~~c~~~f~~lk~~k-~~r~iifkI~~~~~~ivv~~~~~~~~~~~d~~~~L~~~~~rY~vyd~~~~~~~g~~   83 (141)
T PLN03216          5 MATTGMWVTDECKNSFMEMKWKK-VHRYIVFKIDEKSRKVTVDKVGGPGESYDDLAASLPTDDCRYAVFDFDFVTVDNCR   83 (141)
T ss_pred             ecCCCCeeCHHHHHHHHHHHhCC-CceEEEEEEcCCCCEEEEEecCCCCCCHHHHHHhCCCCCCeEEEEEeEeccCCCCc
Confidence            55666667999999999999753 479999999874  688877653   7999999999999999999998 4666788


Q ss_pred             eeeEEEEEeecCCcccccceeeeecHHHHHhhccCCcc
Q psy17893        103 RLKFLLITWVGCEVGVIQRAKVSIDKALVKSVITFKFK  140 (143)
Q Consensus       103 r~KfVfI~WiGe~V~~~~Kar~s~hk~~Vk~~~~~yh~  140 (143)
                      +.|+|||.|||+++++..||.|+++|..+++.|++.++
T Consensus        84 ~~klvFI~w~Pd~a~vk~KMlYAssK~~lk~~l~gi~~  121 (141)
T PLN03216         84 KSKIFFIAWSPEASRIRAKMLYATSKDGLRRVLDGVHY  121 (141)
T ss_pred             ccCEEEEEECCCCCCHHHHHHHHHHHHHHHHHhcCCeE
Confidence            99999999999999999999999999999999998653

>PTZ00152 cofilin/actin-depolymerizing factor 1-like protein; Provisional

Probab=99.70  E-value=8.4e-17  Score=118.69  Aligned_cols=100  Identities=8%  Similarity=0.172  Sum_probs=88.8

Q ss_pred             cccChHHHHHHHHHHHcCCCCccEEEEEeeCCeEEEeeecC--CHHHHHhccCCCc---eEEEEEEeEeCCCCcceeeEE
Q psy17893         33 TTLDSKSIKSAYEDVRSDASQTQWAVFKYQDSKISCTARGQ--SFDKFRAQFRPDE---RSFGYLRMMTGDEMSRRLKFL  107 (143)
Q Consensus        33 ~~~~~~~i~~A~~~Vr~d~~~~nWilf~y~~~~l~l~~~G~--Gl~El~~~L~dd~---v~Ygl~Rv~~~d~~s~r~KfV  107 (143)
                      ...-+++|.++|++++..+ ..+|++|.+++++|+|..+|+  .++||++.|++++   |+|++++..        .|++
T Consensus         4 Gi~v~de~~~~f~~lk~~k-~~r~iifkI~~~~Ivv~~~~~~~~~~e~~~~L~~~~~~~crY~vyd~~--------~klv   74 (122)
T PTZ00152          4 GIRVNDNCVTEFNNMKIRK-TCRWIIFVIENCEIIIHSKGATTTLTELVGSIDKNDKIQCAYVVFDAV--------NKIH   74 (122)
T ss_pred             CcCcCHHHHHHHHHHhcCC-cceEEEEEEcCcEEEEEecCCCCCHHHHHHhccccCCCCceEEEEccC--------CCEE
Confidence            3445899999999999754 589999999887899988888  6999999999988   999999873        4799


Q ss_pred             EEEeecCCcccccceeeeecHHHHHhhccCCccc
Q psy17893        108 LITWVGCEVGVIQRAKVSIDKALVKSVITFKFKF  141 (143)
Q Consensus       108 fI~WiGe~V~~~~Kar~s~hk~~Vk~~~~~yh~~  141 (143)
                      ||.|||+++++..||.|++.|..+++.+++-.++
T Consensus        75 FI~w~Pd~a~ik~KMlYASsK~~l~~~l~Gi~~~  108 (122)
T PTZ00152         75 FFMYARESSNSRDRMTYASSKQALLKKIEGVNVL  108 (122)
T ss_pred             EEEECCCCCChHHhhhhHhHHHHHHHHhcchhHH
Confidence            9999999999999999999999999999877665

>KOG1735|consensus

Probab=99.59  E-value=6.3e-15  Score=111.49  Aligned_cols=106  Identities=17%  Similarity=0.296  Sum_probs=91.8

Q ss_pred             ccChHHHHHHHHHHHcCCCCccEEEEEeeCC--eEEEeeecC---CHHHHHhccC---CCceEEEEEEeEeC--CC-Ccc
Q psy17893         34 TLDSKSIKSAYEDVRSDASQTQWAVFKYQDS--KISCTARGQ---SFDKFRAQFR---PDERSFGYLRMMTG--DE-MSR  102 (143)
Q Consensus        34 ~~~~~~i~~A~~~Vr~d~~~~nWilf~y~~~--~l~l~~~G~---Gl~El~~~L~---dd~v~Ygl~Rv~~~--d~-~s~  102 (143)
                      ...+|+|..++++++..+ ...+++|..+++  .+.+...|+   .+++|..+|+   +++|+||+++++..  -. +++
T Consensus         5 v~Vsde~~~~F~elk~kk-~~r~ivF~i~~~~~~i~ve~~g~~~~s~~~f~~~l~~~~~~dCrYA~yDf~f~t~~~g~~~   83 (146)
T KOG1735|consen    5 VAVSDECKKVFNELKVKK-RKRYVVFKISEDKKQIIVEKGGSPGASYDDFVASLPKMPEKDCRYALYDFEFETKESGNCK   83 (146)
T ss_pred             eEecHHHHHHHHHHHhhc-ceeEEEEEeccccccccccccCCCCCchhhhHHHhccCCccccceEEecceEEeeccccce
Confidence            345899999999999954 799999999885  577776676   6999999999   99999999999932  22 557


Q ss_pred             eeeEEEEEeecCCcccccceeeeecHHHHHhhccCCcc
Q psy17893        103 RLKFLLITWVGCEVGVIQRAKVSIDKALVKSVITFKFK  140 (143)
Q Consensus       103 r~KfVfI~WiGe~V~~~~Kar~s~hk~~Vk~~~~~yh~  140 (143)
                      +.|++||+|+|+.+|...||.|++.++++++.|++-++
T Consensus        84 ~~Ki~f~~wsPd~a~vKsKMiYaSSkDalkr~L~Gi~~  121 (146)
T KOG1735|consen   84 KSKIFFIAWSPDTAPVKSKMIYASSKDALKRELTGIQH  121 (146)
T ss_pred             eeeEEEEEECCCccchhhheeehhhHHHHhhhccCcee
Confidence            89999999999999999999999999999999987654

>KOG1747|consensus

Probab=98.37  E-value=9e-07  Score=74.28  Aligned_cols=96  Identities=17%  Similarity=0.288  Sum_probs=73.6

Q ss_pred             hHHHHHHHHHHHcCCCCccEEEEEeeCCeEEEee----ecC---CHHHHHhc-cCCCceEEEEEEeEeCCCCcceeeEEE
Q psy17893         37 SKSIKSAYEDVRSDASQTQWAVFKYQDSKISCTA----RGQ---SFDKFRAQ-FRPDERSFGYLRMMTGDEMSRRLKFLL  108 (143)
Q Consensus        37 ~~~i~~A~~~Vr~d~~~~nWilf~y~~~~l~l~~----~G~---Gl~El~~~-L~dd~v~Ygl~Rv~~~d~~s~r~KfVf  108 (143)
                      .+++.+++++-++.  ..+=+...+++.++.+..    +++   .|++++.- |.+.+.+|.|||..     ++.++++|
T Consensus        10 ~e~l~~~l~~~~~~--k~R~ikIvI~nEql~~~s~~e~~~~w~~D~~~~v~~ll~~~ePcyILyrld-----s~~~~w~l   82 (342)
T KOG1747|consen   10 TEALKKFLNEAKNG--KLRLIKIVIENEQLSPGSTSEPSTSWERDYDKLVLPLLDAREPCYILYRLD-----SKNAEWLL   82 (342)
T ss_pred             HHHHHHHHHhcccC--ceEEEEEEEecccccCCccccccccHHHHHHHHHHHhhccCCceEEEEeec-----CCCccEEE
Confidence            45677777776664  356666666665555533    333   57887766 46689999999985     55669999


Q ss_pred             EEeecCCcccccceeeeecHHHHHhhccCCc
Q psy17893        109 ITWVGCEVGVIQRAKVSIDKALVKSVITFKF  139 (143)
Q Consensus       109 I~WiGe~V~~~~Kar~s~hk~~Vk~~~~~yh  139 (143)
                      |+|+||++++.+||.|++.++.+++-|.+-|
T Consensus        83 Is~vPD~apVR~KMLYAsTrATlkrefG~~~  113 (342)
T KOG1747|consen   83 ISWVPDNAPVRQKMLYASTRATLKREFGGAY  113 (342)
T ss_pred             EEECCCCChHHHHHHHHHHHHHHHHHhccce
Confidence            9999999999999999999999999998644

>KOG1747|consensus

Probab=98.32  E-value=5.6e-06  Score=69.58  Aligned_cols=127  Identities=13%  Similarity=0.107  Sum_probs=99.6

Q ss_pred             chhhhHHHHhhhhhhhhCCCCCce---eccccccChHHHHHHHHHHHcCCCCccEEEEEeeC--CeEEEeeecC--CHHH
Q psy17893          5 ELERDLISIMSDLIDMSVPMTPRK---CVCPTTLDSKSIKSAYEDVRSDASQTQWAVFKYQD--SKISCTARGQ--SFDK   77 (143)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~---~~m~~~~~~~~i~~A~~~Vr~d~~~~nWilf~y~~--~~l~l~~~G~--Gl~E   77 (143)
                      |.|+--|.+-.-+.+....++.|+   .+|+   -++...+|.+++.+.+  .|++.|.++-  .+|.+..+-.  .+.|
T Consensus       148 EeEl~ei~~~e~~t~~~~~~kh~tl~Gva~p---i~~~a~kAl~~L~~~~--~n~vql~ID~~nE~I~l~~t~~~~e~sd  222 (342)
T KOG1747|consen  148 EEELKEINKNEVLTEIHTSPKHQTLQGVAFP---IDRNAEKALQDLKSSK--LNYVQLSIDLENETIQLSQTDTCTEPSD  222 (342)
T ss_pred             HHHHHHHHHHHHHHhhccCcceeeccceeec---ccHHHHHHHHHHHhhc--cceEEEEeccccceeeeeccCCCCChHH
Confidence            444444555455667778888754   5555   4677789999998865  7999999984  4799988887  8999


Q ss_pred             HHhccCCCceEEEEEEeEeCCCCcceeeEEEEEeecC-CcccccceeeeecHHHHHhhcc
Q psy17893         78 FRAQFRPDERSFGYLRMMTGDEMSRRLKFLLITWVGC-EVGVIQRAKVSIDKALVKSVIT  136 (143)
Q Consensus        78 l~~~L~dd~v~Ygl~Rv~~~d~~s~r~KfVfI~WiGe-~V~~~~Kar~s~hk~~Vk~~~~  136 (143)
                      |...++.|..+|.++++.-..++....+.+||-=||. ++++..||.|++.|+-.-+.++
T Consensus       223 L~s~vP~d~prY~ff~~~ht~eGD~~es~~FIYS~P~~~~sVKeRMlYSScK~~fLd~~k  282 (342)
T KOG1747|consen  223 LPSRVPRDGPRYHFFLFKHTHEGDPLESIVFIYSMPGYGCSVKERMLYSSCKSGFLDSLK  282 (342)
T ss_pred             hhhhcCCCCCceEEEecccccCCCCceeEEEEEECCCCCcchhhhhHhhhcchhHHHHHH
Confidence            9999999999999999882222223568999999999 9999999999999977665554

>KOG1736|consensus

Probab=97.24  E-value=0.001  Score=49.62  Aligned_cols=99  Identities=11%  Similarity=0.099  Sum_probs=75.3

Q ss_pred             ChHHHHHHHHHHHcC-CCCccE-EEEEeeCC--eEEEeeec---CCHHHHHhccCCCceEEEEEEeE-eCCCCcceeeEE
Q psy17893         36 DSKSIKSAYEDVRSD-ASQTQW-AVFKYQDS--KISCTARG---QSFDKFRAQFRPDERSFGYLRMM-TGDEMSRRLKFL  107 (143)
Q Consensus        36 ~~~~i~~A~~~Vr~d-~~~~nW-ilf~y~~~--~l~l~~~G---~Gl~El~~~L~dd~v~Ygl~Rv~-~~d~~s~r~KfV  107 (143)
                      .+++..+.+...|-. +...+. ++.+.+..  .|++.+--   -..+|+.+.|++.+++|.++-.. ..+++....-++
T Consensus        10 i~~et~~ki~kFR~r~k~t~~~A~imKidK~~~eiV~d~Eeld~is~eEladeLpe~~PRFvl~sYpt~t~DGr~stPL~   89 (143)
T KOG1736|consen   10 IGTETREKIRKFRFRTKETSNAAIIMKIDKDSYEIVLDEEELDEISPEELADELPERQPRFVLYSYPTTTDDGRVSTPLC   89 (143)
T ss_pred             eCHHHHHHHHHhhhhhccccceeEEEEecCCceEeecCHHHhccCChHHHHhhccccCCcEEEEECcccccCCcccccEE
Confidence            356777778776654 333444 66777654  46665421   26789999999999999999887 456677788899


Q ss_pred             EEEeecCCcccccceeeeecHHHHHhh
Q psy17893        108 LITWVGCEVGVIQRAKVSIDKALVKSV  134 (143)
Q Consensus       108 fI~WiGe~V~~~~Kar~s~hk~~Vk~~  134 (143)
                      ||-|.|.++++-.+|.|+..+.-+.+.
T Consensus        90 ~Iyw~P~~~~~e~~MmYAgak~~~~~~  116 (143)
T KOG1736|consen   90 FIYWSPVGCKPEQQMMYAGAKNMLVQT  116 (143)
T ss_pred             EEEecCccCCHHHHHHHHHHHHHHHHH
Confidence            999999999999999999988776654

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	143
1tmw_A	149	Solution Structure Of Human Coactosin Like Protein		1e-18
1vfq_A	143	The Crystal Structure Of Human Coactosin-Like Prote		1e-18
1wnj_A	145	Nmr Structure Of Human Coactosin-Like Protein Lengt		1e-18
1t3x_A	141	Three Crystal Structures Of Human Coactosin-Like Pr		1e-18
1wm4_A	142	Solution Structure Of Mouse Coactosin, An Actin Fil		6e-18
1udm_A	149	Solution Structure Of Coactosin-Like Protein (Cofil		6e-18
1t2l_A	141	Three Crystal Structures Of Human Coactosin-Like Pr		7e-18

>pdb|1TMW|A Chain A, Solution Structure Of Human Coactosin Like Protein D123n Length = 149

Iteration: 1
 Score = 88.6 bits (218), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 45/104 (43%), Positives = 58/104 (55%)
Query: 32  PTTLDSKSIKSAYEDVRSDASQTQWAVFKYQDSKISCTARGQSFDKFRAQFRPDERSFGY 91
            T +D ++ ++AY  VR D S   W  FKY  S I    +G  +  F  Q   D R F +
Sbjct: 1   ATKIDKEACRAAYNLVRDDGSAVIWVTFKYDGSTIVPGEQGAEYQHFIQQCTDDVRLFAF 60
Query: 92  LRMMTGDEMSRRLKFLLITWVGCEVGVIQRAKVSIDKALVKSVI 135
           +R  TGD MS+R KF LITW+G  V  +QRAK   DK LVK V+
Sbjct: 61  VRFTTGDAMSKRSKFALITWIGENVSGLQRAKTGTDKTLVKEVV 104

>pdb|1VFQ|A Chain A, The Crystal Structure Of Human Coactosin-Like Protein At 1.9 A Resolution Length = 143

Iteration: 1
 Score = 88.6 bits (218), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 45/104 (43%), Positives = 58/104 (55%)
Query: 32  PTTLDSKSIKSAYEDVRSDASQTQWAVFKYQDSKISCTARGQSFDKFRAQFRPDERSFGY 91
            T +D ++ ++AY  VR D S   W  FKY  S I    +G  +  F  Q   D R F +
Sbjct: 3   ATKIDKEACRAAYNLVRDDGSAVIWVTFKYDGSTIVPGEQGAEYQHFIQQCTDDVRLFAF 62
Query: 92  LRMMTGDEMSRRLKFLLITWVGCEVGVIQRAKVSIDKALVKSVI 135
           +R  TGD MS+R KF LITW+G  V  +QRAK   DK LVK V+
Sbjct: 63  VRFTTGDAMSKRSKFALITWIGENVSGLQRAKTGTDKTLVKEVV 106

>pdb|1WNJ|A Chain A, Nmr Structure Of Human Coactosin-Like Protein Length = 145

Iteration: 1
 Score = 88.6 bits (218), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 45/104 (43%), Positives = 58/104 (55%)
Query: 32  PTTLDSKSIKSAYEDVRSDASQTQWAVFKYQDSKISCTARGQSFDKFRAQFRPDERSFGY 91
            T +D ++ ++AY  VR D S   W  FKY  S I    +G  +  F  Q   D R F +
Sbjct: 5   ATKIDKEACRAAYNLVRDDGSAVIWVTFKYDGSTIVPGEQGAEYQHFIQQCTDDVRLFAF 64
Query: 92  LRMMTGDEMSRRLKFLLITWVGCEVGVIQRAKVSIDKALVKSVI 135
           +R  TGD MS+R KF LITW+G  V  +QRAK   DK LVK V+
Sbjct: 65  VRFTTGDAMSKRSKFALITWIGENVSGLQRAKTGTDKTLVKEVV 108

>pdb|1T3X|A Chain A, Three Crystal Structures Of Human Coactosin-Like Protein Length = 141

Iteration: 1
 Score = 88.6 bits (218), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 45/104 (43%), Positives = 58/104 (55%)
Query: 32  PTTLDSKSIKSAYEDVRSDASQTQWAVFKYQDSKISCTARGQSFDKFRAQFRPDERSFGY 91
            T +D ++ ++AY  VR D S   W  FKY  S I    +G  +  F  Q   D R F +
Sbjct: 1   ATKIDKEACRAAYNLVRDDGSAVIWVTFKYDGSTIVPGEQGAEYQHFIQQCTDDVRLFAF 60
Query: 92  LRMMTGDEMSRRLKFLLITWVGCEVGVIQRAKVSIDKALVKSVI 135
           +R  TGD MS+R KF LITW+G  V  +QRAK   DK LVK V+
Sbjct: 61  VRFTTGDAMSKRSKFALITWIGENVSGLQRAKTGTDKTLVKEVV 104

>pdb|1WM4|A Chain A, Solution Structure Of Mouse Coactosin, An Actin Filament Binding Protein Length = 142

Iteration: 1
 Score = 86.3 bits (212), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 43/104 (41%), Positives = 59/104 (56%)
Query: 32  PTTLDSKSIKSAYEDVRSDASQTQWAVFKYQDSKISCTARGQSFDKFRAQFRPDERSFGY 91
            T +D ++ ++AY  VR D S   W  F+Y  + I    +G  +  F  Q   D R F +
Sbjct: 2   ATKIDKEACRAAYNLVRDDGSAVIWVTFRYDGATIVPGDQGADYQHFIQQCTDDVRLFAF 61
Query: 92  LRMMTGDEMSRRLKFLLITWVGCEVGVIQRAKVSIDKALVKSVI 135
           +R  TGD MS+R KF LITW+G +V  +QRAK   DK LVK V+
Sbjct: 62  VRFTTGDAMSKRSKFALITWIGEDVSGLQRAKTGTDKTLVKEVV 105

>pdb|1UDM|A Chain A, Solution Structure Of Coactosin-Like Protein (Cofilin Family) From Mus Musculus Length = 149

Iteration: 1
 Score = 85.9 bits (211), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 43/104 (41%), Positives = 59/104 (56%)
Query: 32  PTTLDSKSIKSAYEDVRSDASQTQWAVFKYQDSKISCTARGQSFDKFRAQFRPDERSFGY 91
            T +D ++ ++AY  VR D S   W  F+Y  + I    +G  +  F  Q   D R F +
Sbjct: 9   ATKIDKEACRAAYNLVRDDGSAVIWVTFRYDGATIVPGDQGADYQHFIQQCTDDVRLFAF 68
Query: 92  LRMMTGDEMSRRLKFLLITWVGCEVGVIQRAKVSIDKALVKSVI 135
           +R  TGD MS+R KF LITW+G +V  +QRAK   DK LVK V+
Sbjct: 69  VRFTTGDAMSKRSKFALITWIGEDVSGLQRAKTGTDKTLVKEVV 112

>pdb|1T2L|A Chain A, Three Crystal Structures Of Human Coactosin-Like Protein Length = 141

Iteration: 1
 Score = 85.9 bits (211), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 44/104 (42%), Positives = 57/104 (54%)
Query: 32  PTTLDSKSIKSAYEDVRSDASQTQWAVFKYQDSKISCTARGQSFDKFRAQFRPDERSFGY 91
            T +D ++ ++AY  VR D S   W  FKY  S I    +G  +  F  Q   D R F +
Sbjct: 1   ATKIDKEACRAAYNLVRDDGSAVIWVTFKYDGSTIVPGEQGAEYQHFIQQCTDDVRLFAF 60
Query: 92  LRMMTGDEMSRRLKFLLITWVGCEVGVIQRAKVSIDKALVKSVI 135
           +R  TGD  S+R KF LITW+G  V  +QRAK   DK LVK V+
Sbjct: 61  VRFTTGDAXSKRSKFALITWIGENVSGLQRAKTGTDKTLVKEVV 104

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	143
1t3y_A	141	Coactosin-like protein; beta sheet, protein bindin	2e-29
1x67_A	146	Drebrin-like protein; cell-free protein synthesis,	3e-19
1hqz_1	141	ABP1P, actin-binding protein; cofilin homology dom	2e-18
1cnu_A	137	Actophorin, ADF, cofilin; actin-binding protein, c	2e-08
2i2q_A	137	Cofilin; N-terminal serine, actin-binding protein;	3e-07
1cfy_A	143	Cofilin; actin-binding, cytoskeleton, actin-bindin	9e-07
2kd5_A	144	ADF H, actin severing and dynamics regulatory prot	3e-05

>1t3y_A Coactosin-like protein; beta sheet, protein binding; 1.15A {Homo sapiens} SCOP: d.109.1.2 PDB: 1t2l_A 1t3x_A 1vfq_A 1tmw_A 1wnj_A 1udm_A 1wm4_A Length = 141

 Score =  103 bits (257), Expect = 2e-29
 Identities = 45/103 (43%), Positives = 58/103 (56%)

Query: 33  TTLDSKSIKSAYEDVRSDASQTQWAVFKYQDSKISCTARGQSFDKFRAQFRPDERSFGYL 92
           T +D ++ ++AY  VR D S   W  FKY  S I    +G  +  F  Q   D R F ++
Sbjct: 2   TKIDKEACRAAYNLVRDDGSAVIWVTFKYDGSTIVPGEQGAEYQHFIQQCTDDVRLFAFV 61

Query: 93  RMMTGDEMSRRLKFLLITWVGCEVGVIQRAKVSIDKALVKSVI 135
           R  TGD MS+R KF LITW+G  V  +QRAK   DK LVK V+
Sbjct: 62  RFTTGDAMSKRSKFALITWIGENVSGLQRAKTGTDKTLVKEVV 104

>1x67_A Drebrin-like protein; cell-free protein synthesis, actin-binding protein, SH3P7, MABP1, T-cell lymphocyte signaling and regulation; NMR {Homo sapiens} Length = 146

 Score = 77.8 bits (191), Expect = 3e-19
 Identities = 22/106 (20%), Positives = 48/106 (45%), Gaps = 5/106 (4%)

Query: 33  TTLDSKSIKSAYEDVRSDASQTQWAVFKYQDSK--ISCTARGQ-SFDKFRAQFRPDERSF 89
            + +  +++ AY  V ++ S T WA+F Y+ +   I     G+   ++   +    +  +
Sbjct: 12  LSRNGPALQEAYVRVVTEKSPTDWALFTYEGNSNDIRVAGTGEGGLEEMVEELNSGKVMY 71

Query: 90  GYLRMMTGDEMSRRLKFLLITWVGCEVGVIQRAKVSIDKALVKSVI 135
            + R+   D  S   KF+LI W G  V  +++   +   + + S +
Sbjct: 72  AFCRVK--DPNSGLPKFVLINWTGEGVNDVRKGACASHVSTMASFL 115

>1hqz_1 ABP1P, actin-binding protein; cofilin homology domain, NEW YORK SGX researc for structural genomics, NYSGXRC, structural genomics, PSI; 2.10A {Saccharomyces cerevisiae} SCOP: d.109.1.2 Length = 141

 Score = 75.4 bits (185), Expect = 2e-18
 Identities = 23/102 (22%), Positives = 36/102 (35%), Gaps = 4/102 (3%)

Query: 33  TTLDSKSIKSAYEDV-RSDASQTQWAVFKYQDSK-ISCTARGQSFDKFRAQFRPDERSFG 90
            T  S+ I + Y  + R     T W +      K     + G SF  F   F   +  +G
Sbjct: 8   YTTHSREIDAEYLKIVRGSDPDTTWLIISPNAKKEYEPESTGSSFHDFLQLFDETKVQYG 67

Query: 91  YLRMMTGDEMSRRLKFLLITWVGCEVGVIQRAKVSIDKALVK 132
             R+      S   K ++I W      +  RA  + + A V 
Sbjct: 68  LARV--SPPGSDVEKIIIIGWCPDSAPLKTRASFAANFAAVA 107

>1cnu_A Actophorin, ADF, cofilin; actin-binding protein, contractIle; 2.25A {Acanthamoeba polyphaga} SCOP: d.109.1.2 PDB: 1ahq_A Length = 137

 Score = 48.8 bits (116), Expect = 2e-08
 Identities = 13/105 (12%), Positives = 33/105 (31%), Gaps = 6/105 (5%)

Query: 37  SKSIKSAYEDVRSDASQTQWAVFKYQDSKIS-----CTARGQSFDKFRAQFRPDERSFGY 91
           S      + +++    Q ++  FK   S              +++ F++Q    +  +  
Sbjct: 6   SDDCVQKFNELKLG-HQHRYVTFKMNASNTEVVVEHVGGPNATYEDFKSQLPERDCRYAI 64

Query: 92  LRMMTGDEMSRRLKFLLITWVGCEVGVIQRAKVSIDKALVKSVIT 136
                  +  +R K   I W      +  +   +  K  +K  + 
Sbjct: 65  FDYEFQVDGGQRNKITFILWAPDSAPIKSKMMYTSTKDSIKKKLV 109

>2i2q_A Cofilin; N-terminal serine, actin-binding protein; HET: LDA; 1.72A {Schizosaccharomyces pombe} Length = 137

 Score = 45.7 bits (108), Expect = 3e-07
 Identities = 17/104 (16%), Positives = 36/104 (34%), Gaps = 5/104 (4%)

Query: 37  SKSIKSAYEDVRSDASQTQWAVFKYQDSK----ISCTARGQSFDKFRAQFRPDERSFGYL 92
           S     A+++++      ++ VFK  D+K    +   +  + FD F       +  +   
Sbjct: 9   SPECLEAFQELKLG-KSLRYVVFKMNDTKTEIVVEKKSTDKDFDTFLGDLPEKDCRYAIY 67

Query: 93  RMMTGDEMSRRLKFLLITWVGCEVGVIQRAKVSIDKALVKSVIT 136
                     R K + I+W      +  +   S  K  ++   T
Sbjct: 68  DFEFNLGEGVRNKIIFISWSPDVAPIKSKMVYSSSKDTLRRAFT 111

>1cfy_A Cofilin; actin-binding, cytoskeleton, actin-binding protein; 2.30A {Saccharomyces cerevisiae} SCOP: d.109.1.2 PDB: 1cof_A 1qpv_A Length = 143

 Score = 44.6 bits (105), Expect = 9e-07
 Identities = 15/106 (14%), Positives = 38/106 (35%), Gaps = 7/106 (6%)

Query: 37  SKSIKSAYEDVRSDASQTQWAVFKYQDSKISC----TARGQSFDKFRAQFRPDERSFGYL 92
           +    +A+ D++    + ++ +F   D+K       T+   S+D F  +   ++  +   
Sbjct: 9   ADESLTAFNDLKLG-KKYKFILFGLNDAKTEIVVKETSTDPSYDAFLEKLPENDCLYAIY 67

Query: 93  RM--MTGDEMSRRLKFLLITWVGCEVGVIQRAKVSIDKALVKSVIT 136
                      +R K +  TW      V  +   +  K  ++  + 
Sbjct: 68  DFEYEINGNEGKRSKIVFFTWSPDTAPVRSKMVYASSKDALRRALN 113

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	143
1t3y_A	141	Coactosin-like protein; beta sheet, protein bindin	100.0
1x67_A	146	Drebrin-like protein; cell-free protein synthesis,	99.97
1hqz_1	141	ABP1P, actin-binding protein; cofilin homology dom	99.94
1cfy_A	143	Cofilin; actin-binding, cytoskeleton, actin-bindin	99.92
1f7s_A	139	Actin depolymerizing factor (ADF); KINK in alpha-h	99.92
2kd5_A	144	ADF H, actin severing and dynamics regulatory prot	99.91
1cnu_A	137	Actophorin, ADF, cofilin; actin-binding protein, c	99.91
2xfa_A	148	Actin depolymerization factor 2; actin binding pro	99.9
2kvk_A	144	Actin severing and dynamics regulatory protein; AD	99.9
2i2q_A	137	Cofilin; N-terminal serine, actin-binding protein;	99.9
1m4j_A	142	A6 gene product, twinfilin; mixed beta-sheet, PAIR	99.89
2d8b_A	166	Twinfilin-1; cell-free protein synthesis, actin-bi	99.88
1v6f_A	151	MGMF-beta, GLIA maturation factor, beta; actin bin	99.88
2w0i_A	135	Twinfilin-2; cytoskeleton, actin-binding, actin bi	99.88
2lj8_A	144	Cofilin/actin depolymerizing factor, putative; pro	99.88
1vkk_A	154	GMF-gamma, GLIA maturation factor gamma; 15079298,	99.88
1ak6_A	174	Destrin; actin depolymerization factor, actin-bind	99.87
2vac_A	134	Twinfilin-2; transferase, actin binding, phosphory	99.86
1tvj_A	166	Cofilin; ADF, actin binding protein, actin depolym	99.86
2l72_A	139	Tgadf, actin depolymerizing factor, putative; ADF/	99.86
3q2b_A	124	Pfadf1, cofilin/actin-depolymerizing factor homolo	99.79
3daw_B	164	Twinfilin-1, protein A6; actin depolymerisation, a	99.66

>1t3y_A Coactosin-like protein; beta sheet, protein binding; 1.15A {Homo sapiens} SCOP: d.109.1.2 PDB: 1t2l_A 1t3x_A 1vfq_A 1tmw_A 1wnj_A 1udm_A 1wm4_A

Probab=100.00  E-value=1.6e-33  Score=209.78  Aligned_cols=108  Identities=43%  Similarity=0.678  Sum_probs=103.7

Q ss_pred             cccChHHHHHHHHHHHcCCCCccEEEEEeeCCeEEEeeecCCHHHHHhccCCCceEEEEEEeEeCCCCcceeeEEEEEee
Q psy17893         33 TTLDSKSIKSAYEDVRSDASQTQWAVFKYQDSKISCTARGQSFDKFRAQFRPDERSFGYLRMMTGDEMSRRLKFLLITWV  112 (143)
Q Consensus        33 ~~~~~~~i~~A~~~Vr~d~~~~nWilf~y~~~~l~l~~~G~Gl~El~~~L~dd~v~Ygl~Rv~~~d~~s~r~KfVfI~Wi  112 (143)
                      +.+++++|.+||++||++++.++|++|+|++++|+|.++|+||+||+++|++++|+||++|+..+++++.|+|||||+||
T Consensus         2 ~~~~~~~~~~a~~~v~~~~~~~~wilf~~~~~~i~v~~~G~g~~e~~~~L~~~~~~Ya~~r~~~~~~~~~~~K~vfI~W~   81 (141)
T 1t3y_A            2 TKIDKEACRAAYNLVRDDGSAVIWVTFKYDGSTIVPGEQGAEYQHFIQQCTDDVRLFAFVRFTTGDAMSKRSKFALITWI   81 (141)
T ss_dssp             CEECHHHHHHHHHHHHCTTSSCCEEEEEEETTEEEEEEEESSHHHHHHHCCTTCEEEEEEEEEECSGGGCEEEEEEEEEE
T ss_pred             CCCChHHHHHHHHHHHcCCCCceEEEEEEcCCEEEEEecCCCHHHHHhhCCCCceEEEEEEEEecCCCCceeeEEEEEEC
Confidence            46899999999999999988899999999999999999999999999999999999999999878888999999999999


Q ss_pred             cCCcccccceeeeecHHHHHhhccCCcc
Q psy17893        113 GCEVGVIQRAKVSIDKALVKSVITFKFK  140 (143)
Q Consensus       113 Ge~V~~~~Kar~s~hk~~Vk~~~~~yh~  140 (143)
                      ||++|+++||++++|+++|+++|+|||.
T Consensus        82 pd~~~~~~K~~~as~k~~vk~~l~g~~~  109 (141)
T 1t3y_A           82 GENVSGLQRAKTGTDKTLVKEVVQNFAK  109 (141)
T ss_dssp             CTTSCHHHHHHHHHHHHHHTTTSCCCSE
T ss_pred             CCCCCHHHhhhHHHHHHHHHHHhcccEE
Confidence            9999999999999999999999999984

>1x67_A Drebrin-like protein; cell-free protein synthesis, actin-binding protein, SH3P7, MABP1, T-cell lymphocyte signaling and regulation; NMR {Homo sapiens}

Probab=99.97  E-value=6.1e-31  Score=196.57  Aligned_cols=110  Identities=20%  Similarity=0.414  Sum_probs=102.2

Q ss_pred             eccccccChHHHHHHHHHHHcCCCCccEEEEEeeCC--eEEEeeecC-CHHHHHhccCCCceEEEEEEeEeCCCCcceee
Q psy17893         29 CVCPTTLDSKSIKSAYEDVRSDASQTQWAVFKYQDS--KISCTARGQ-SFDKFRAQFRPDERSFGYLRMMTGDEMSRRLK  105 (143)
Q Consensus        29 ~~m~~~~~~~~i~~A~~~Vr~d~~~~nWilf~y~~~--~l~l~~~G~-Gl~El~~~L~dd~v~Ygl~Rv~~~d~~s~r~K  105 (143)
                      |++....++++|.+||++|++++..++|++|+|+++  +|+|.++|+ ||+||+++|++++|+||++|++  ++++.++|
T Consensus         8 m~~~l~~~~~e~~~a~~~v~~~~~~~~wi~~~i~~~~~~l~v~~~G~~~~~e~~~~L~~~~~~Y~~~r~~--~~~~~~~K   85 (146)
T 1x67_A            8 MAANLSRNGPALQEAYVRVVTEKSPTDWALFTYEGNSNDIRVAGTGEGGLEEMVEELNSGKVMYAFCRVK--DPNSGLPK   85 (146)
T ss_dssp             SCCCCCTTHHHHHHHHHHHHCSSSSCSEEEEEESSSSSCEEEEEEESSCHHHHHHHCCTTSEEEEEEEEE--CSSSCSEE
T ss_pred             eEEEcCCCCHHHHHHHHHHHcCCCCccEEEEEEeCCCcEEEEEeccCCCHHHHHhhCCCCceEEEEEEEE--cCCCCeee
Confidence            444556679999999999999987899999999986  799999999 9999999999999999999998  56788999


Q ss_pred             EEEEEeecCCcccccceeeeecHHHHHhhccCCcc
Q psy17893        106 FLLITWVGCEVGVIQRAKVSIDKALVKSVITFKFK  140 (143)
Q Consensus       106 fVfI~WiGe~V~~~~Kar~s~hk~~Vk~~~~~yh~  140 (143)
                      ||||+||||++|+++||+|++|+++|++.|+++|.
T Consensus        86 ~vfI~W~pd~a~v~~Km~yas~k~~lk~~l~g~~~  120 (146)
T 1x67_A           86 FVLINWTGEGVNDVRKGACASHVSTMASFLKGAHV  120 (146)
T ss_dssp             EEEEEEECTTSCHHHHHHHHHHHHHHHHHTTTEEE
T ss_pred             EEEEEECCCCCChhheeeehhhHHHHHHhcCCcEE
Confidence            99999999999999999999999999999999985

>1hqz_1 ABP1P, actin-binding protein; cofilin homology domain, NEW YORK SGX researc for structural genomics, NYSGXRC, structural genomics, PSI; 2.10A {Saccharomyces cerevisiae} SCOP: d.109.1.2

Probab=99.94  E-value=9.1e-27  Score=172.17  Aligned_cols=110  Identities=18%  Similarity=0.270  Sum_probs=98.0

Q ss_pred             eccc-cc--cChHHHHHHHHHHHcC-CCCccEEEEEeeC-CeEEEeeecCCHHHHHhccCCCceEEEEEEeEeCCCCcce
Q psy17893         29 CVCP-TT--LDSKSIKSAYEDVRSD-ASQTQWAVFKYQD-SKISCTARGQSFDKFRAQFRPDERSFGYLRMMTGDEMSRR  103 (143)
Q Consensus        29 ~~m~-~~--~~~~~i~~A~~~Vr~d-~~~~nWilf~y~~-~~l~l~~~G~Gl~El~~~L~dd~v~Ygl~Rv~~~d~~s~r  103 (143)
                      |+|+ .+  .++++|.+||++++.+ .+.++|++|+|++ ++|+|.++|++++||+++|++++++||++|+.  ++++.+
T Consensus         1 ~~m~~i~l~~~~~e~~~a~~~~~~~~~~~~~~ii~~i~~~~~i~v~~~g~~~~el~~~l~~~~~rY~~~~~~--~~~~~~   78 (141)
T 1hqz_1            1 MALEPIDYTTHSREIDAEYLKIVRGSDPDTTWLIISPNAKKEYEPESTGSSFHDFLQLFDETKVQYGLARVS--PPGSDV   78 (141)
T ss_dssp             --CCCCCCSTTHHHHHHHHHHHHHTCCTTCCEEEEEECTTSCEEEEEEESCHHHHHTCCCTTSCEEEEEEEC--CTTCSC
T ss_pred             CcccccccCCCCHHHHHHHHHHHhCCCCCceEEEEEEcCCCEEEEEeecCCHHHHHhhCCCCceEEEEEEEe--cCCCce
Confidence            4555 33  3479999999999997 4579999999998 47999999999999999999999999999998  556889


Q ss_pred             eeEEEEEeecCCcccccceeeeecHHHHHh-hccCCcc
Q psy17893        104 LKFLLITWVGCEVGVIQRAKVSIDKALVKS-VITFKFK  140 (143)
Q Consensus       104 ~KfVfI~WiGe~V~~~~Kar~s~hk~~Vk~-~~~~yh~  140 (143)
                      .|+|||.|||+++++..||.|++|++.+++ .|+++|.
T Consensus        79 ~k~vfI~w~Pd~~~vk~Kmlyas~k~~l~~~~l~g~~~  116 (141)
T 1hqz_1           79 EKIIIIGWCPDSAPLKTRASFAANFAAVANNLFKGYHV  116 (141)
T ss_dssp             CEEEEEEECCTTSCHHHHHHHHHHHHHHHHHTSCSCSE
T ss_pred             eeEEEEEECCCCCChhheEEEeccHHHHHHHhCCceEE
Confidence            999999999999999999999999999997 9999985

>1cfy_A Cofilin; actin-binding, cytoskeleton, actin-binding protein; 2.30A {Saccharomyces cerevisiae} SCOP: d.109.1.2 PDB: 1cof_A 1qpv_A

Probab=99.92  E-value=1.8e-25  Score=165.34  Aligned_cols=108  Identities=13%  Similarity=0.227  Sum_probs=96.5

Q ss_pred             ccccChHHHHHHHHHHHcCCCCccEEEEEeeC--CeEEEeeecC--CHHHHHhccCCCceEEEEEEeEe-CCCC-cceee
Q psy17893         32 PTTLDSKSIKSAYEDVRSDASQTQWAVFKYQD--SKISCTARGQ--SFDKFRAQFRPDERSFGYLRMMT-GDEM-SRRLK  105 (143)
Q Consensus        32 ~~~~~~~~i~~A~~~Vr~d~~~~nWilf~y~~--~~l~l~~~G~--Gl~El~~~L~dd~v~Ygl~Rv~~-~d~~-s~r~K  105 (143)
                      +....+++|.+||+++|.++ .++|++|+|++  ++|++.++|+  +++||+++|++++++|+++|+.. .+++ +.+.|
T Consensus         4 sGi~v~~e~~~a~~~~~~~~-~~~~ii~~i~~~~~~i~v~~~g~~~~~~el~~~L~~~~~rY~~~~~~~~~~~~~~~~~k   82 (143)
T 1cfy_A            4 SGVAVADESLTAFNDLKLGK-KYKFILFGLNDAKTEIVVKETSTDPSYDAFLEKLPENDCLYAIYDFEYEINGNEGKRSK   82 (143)
T ss_dssp             --CEECHHHHHHHHHHHHHC-CCSEEEEEECTTSSEEEEEEEECCCCHHHHHTTSCTTCCEEEEEEEEEECSSSCCEEEE
T ss_pred             CCcEeCHHHHHHHHHHHCCC-CeeEEEEEEcCCCCEEEEEecCCCCCHHHHHHhCCCCCcEEEEEEeeeecCCCcccccC
Confidence            34445899999999999986 69999999987  3899999887  89999999999999999999994 4444 78999


Q ss_pred             EEEEEeecCCcccccceeeeecHHHHHhhccCCcc
Q psy17893        106 FLLITWVGCEVGVIQRAKVSIDKALVKSVITFKFK  140 (143)
Q Consensus       106 fVfI~WiGe~V~~~~Kar~s~hk~~Vk~~~~~yh~  140 (143)
                      +|||.|||+++++.+||.|++|++.+++.|+++|.
T Consensus        83 ~vfI~w~Pd~a~v~~KmlyAssk~~l~~~l~g~~~  117 (143)
T 1cfy_A           83 IVFFTWSPDTAPVRSKMVYASSKDALRRALNGVST  117 (143)
T ss_dssp             EEEEEECCTTSCHHHHHHHHHHHHHHHHHCTTCCE
T ss_pred             EEEEEECCCCCChhheeehHhhHHHHHHhcCCceE
Confidence            99999999999999999999999999999999885

>1f7s_A Actin depolymerizing factor (ADF); KINK in alpha-helix 3, plant protein; HET: LDA; 2.00A {Arabidopsis thaliana} SCOP: d.109.1.2

Probab=99.92  E-value=4.7e-25  Score=162.76  Aligned_cols=108  Identities=15%  Similarity=0.237  Sum_probs=98.6

Q ss_pred             ccccChHHHHHHHHHHHcCCCCccEEEEEeeCC--eEEEeeecC---CHHHHHhccCCCceEEEEEEeE-eCCCCcceee
Q psy17893         32 PTTLDSKSIKSAYEDVRSDASQTQWAVFKYQDS--KISCTARGQ---SFDKFRAQFRPDERSFGYLRMM-TGDEMSRRLK  105 (143)
Q Consensus        32 ~~~~~~~~i~~A~~~Vr~d~~~~nWilf~y~~~--~l~l~~~G~---Gl~El~~~L~dd~v~Ygl~Rv~-~~d~~s~r~K  105 (143)
                      +....+++|.+||++++.++ .++|++|+|+++  +|++.++|+   +++||.++|++++++|+++|+. ..++++.+.|
T Consensus         6 sGi~v~~e~~~af~~~~~~~-~~~~ii~~i~~~~~~i~v~~~g~~~~~~~el~~~L~~~~~rY~~~~~~~~~~~~~~~~k   84 (139)
T 1f7s_A            6 SGMAVHDDCKLRFLELKAKR-THRFIVYKIEEKQKQVVVEKVGQPIQTYEEFAACLPADECRYAIYDFDFVTAENCQKSK   84 (139)
T ss_dssp             CCCEECHHHHHHHHHHHHHC-CCSEEEEEEETTTTEEEEEEECCSSCCHHHHHTTSCTTSCEEEEEEEEEECTTSCEEEE
T ss_pred             cCcEeCHHHHHHHHHHHcCC-CcEEEEEEECCCCcEEEEEeecCCCCCHHHHHHhCCCCCceEEEEEeeeeccccCcccC
Confidence            44456899999999999865 689999999886  899999886   7999999999999999999999 5667789999


Q ss_pred             EEEEEeecCCcccccceeeeecHHHHHhhccCCcc
Q psy17893        106 FLLITWVGCEVGVIQRAKVSIDKALVKSVITFKFK  140 (143)
Q Consensus       106 fVfI~WiGe~V~~~~Kar~s~hk~~Vk~~~~~yh~  140 (143)
                      +|||.|||+++++..||.|++|++.+++.|+++|.
T Consensus        85 ~vfI~w~P~~a~v~~KmlyAssk~~l~~~l~g~~v  119 (139)
T 1f7s_A           85 IFFIAWCPDIAKVRSKMIYASSKDRFKRELDGIQV  119 (139)
T ss_dssp             EEEEEECCTTSCHHHHHHHHHHHHHHHTTCTTCCE
T ss_pred             EEEEEECCCCCChhHheehHHhHHHHHHhcCCeEE
Confidence            99999999999999999999999999999999985

>1cnu_A Actophorin, ADF, cofilin; actin-binding protein, contractIle; 2.25A {Acanthamoeba polyphaga} SCOP: d.109.1.2 PDB: 1ahq_A

Probab=99.91  E-value=2e-24  Score=158.53  Aligned_cols=103  Identities=13%  Similarity=0.243  Sum_probs=93.0

Q ss_pred             hHHHHHHHHHHHcCCCCccEEEEEeeC--CeEEEeeecC---CHHHHHhccCCCceEEEEEEeEeCCCCcceeeEEEEEe
Q psy17893         37 SKSIKSAYEDVRSDASQTQWAVFKYQD--SKISCTARGQ---SFDKFRAQFRPDERSFGYLRMMTGDEMSRRLKFLLITW  111 (143)
Q Consensus        37 ~~~i~~A~~~Vr~d~~~~nWilf~y~~--~~l~l~~~G~---Gl~El~~~L~dd~v~Ygl~Rv~~~d~~s~r~KfVfI~W  111 (143)
                      +++|.+||+++|.++ .++|++|+|++  ++|++.++|+   +++||.++|++++++|+++|+....++..+.|+|||.|
T Consensus         6 ~~e~~~a~~~~~~~~-~~~~ii~~i~~~~~~i~v~~~g~~~~~~~el~~~L~~~~~rY~~~~~~~~~~~~~~~k~vfI~w   84 (137)
T 1cnu_A            6 SDDCVQKFNELKLGH-QHRYVTFKMNASNTEVVVEHVGGPNATYEDFKSQLPERDCRYAIFDYEFQVDGGQRNKITFILW   84 (137)
T ss_dssp             CHHHHHHHHHHHHHC-CCSEEEEEECTTSSEEEEEEECCTTCCHHHHHTTSCTTSCEEEEEEEEEEETTEEEEEEEEEEE
T ss_pred             CHHHHHHHHHHHcCC-CccEEEEEEcCCCCEEEEEeccCCCCCHHHHHHhCCCCCceEEEEEeeeecCCCCccCEEEEEE
Confidence            689999999999976 69999999987  3899999994   89999999999999999999984222227899999999


Q ss_pred             ecCCcccccceeeeecHHHHHhhccCCcc
Q psy17893        112 VGCEVGVIQRAKVSIDKALVKSVITFKFK  140 (143)
Q Consensus       112 iGe~V~~~~Kar~s~hk~~Vk~~~~~yh~  140 (143)
                      ||+++++.+||.|++|++.+++.|+++|.
T Consensus        85 ~Pd~a~v~~Kmlyassk~~l~~~l~g~~~  113 (137)
T 1cnu_A           85 APDSAPIKSKMMYTSTKDSIKKKLVGIQV  113 (137)
T ss_dssp             CCTTSCHHHHHHHHHHHHHHHHHSTTCCE
T ss_pred             CCCCCChHHheehHHhHHHHHHHhcCceE
Confidence            99999999999999999999999999875

>2xfa_A Actin depolymerization factor 2; actin binding protein, protein binding; 2.10A {Plasmodium berghei}

Probab=99.90  E-value=4.4e-24  Score=159.03  Aligned_cols=111  Identities=13%  Similarity=0.109  Sum_probs=97.4

Q ss_pred             ecccc-ccChHHHHHHHHHHHcCCCCccEEEEEeeCC-eEEEe------eecC---CHHHHHhccCCCceEEEEEEeEe-
Q psy17893         29 CVCPT-TLDSKSIKSAYEDVRSDASQTQWAVFKYQDS-KISCT------ARGQ---SFDKFRAQFRPDERSFGYLRMMT-   96 (143)
Q Consensus        29 ~~m~~-~~~~~~i~~A~~~Vr~d~~~~nWilf~y~~~-~l~l~------~~G~---Gl~El~~~L~dd~v~Ygl~Rv~~-   96 (143)
                      |+|+. ...+++|.+||+++|.++ .++|++|+|+++ +|++.      .+|+   +++||++.|++++++|++||+.. 
T Consensus         4 msm~sGi~v~~e~~~af~~~k~~k-~~~~ii~~i~~~~~i~v~~~~~~~~~g~~~~~~~~~~~~L~~~~prY~~y~~~~~   82 (148)
T 2xfa_A            4 GSMVSGVNVSDECIYEFNRLKVKH-LNKYIIYKIENLEKIVVDVLEHDMELTSLDNIIMRIKNNLKNTECRYIIADMPIP   82 (148)
T ss_dssp             --CCCCCEECHHHHHHHHHHHTSC-CCSEEEEEEETTTEEEEEEEECCTTCCCHHHHHHHHHHTCBTTBCEEEEEEEEEC
T ss_pred             ccccCCCeeCHHHHHHHHHHHCCC-ceEEEEEEECCCCEEEEEecccccccCCCCCCHHHHHHhCCcCCcEEEEEecccc
Confidence            67753 336999999999999976 699999999644 79998      7785   79999999999999999999994 


Q ss_pred             CCCCcceeeEEEEEeecCCcccccceeeeecHHHHHhhccCCcc
Q psy17893         97 GDEMSRRLKFLLITWVGCEVGVIQRAKVSIDKALVKSVITFKFK  140 (143)
Q Consensus        97 ~d~~s~r~KfVfI~WiGe~V~~~~Kar~s~hk~~Vk~~~~~yh~  140 (143)
                      .++++.+.|+|||.|||+++++.+||.||++++.+++.|+++|.
T Consensus        83 ~~~g~~~~k~vfI~w~Pd~a~vr~KMlYAssk~~lk~~l~g~~~  126 (148)
T 2xfa_A           83 TPEGVLRDRIYFIFWSPGLSKPKEKMLYAASKESLVRKINGIFK  126 (148)
T ss_dssp             CSSCCCEEEEEEEEECCTTSCHHHHHHHHHHHHHHHTTCTTCSE
T ss_pred             cCCCCcccCEEEEEECCCCCChHHHhHhHHHHHHHHHHhcCCeE
Confidence            55677899999999999999999999999999999999998875

>2kvk_A Actin severing and dynamics regulatory protein; ADF/cofilin, hormone; NMR {Leishmania donovani}

Probab=99.90  E-value=3.8e-24  Score=159.33  Aligned_cols=111  Identities=17%  Similarity=0.293  Sum_probs=99.5

Q ss_pred             eccccccChHHHHHHHHHHHcCCCCccEEEEEeeCC--eEEEeeecC---CHHHHHhccCCCceEEEEEEeEeCCCCcce
Q psy17893         29 CVCPTTLDSKSIKSAYEDVRSDASQTQWAVFKYQDS--KISCTARGQ---SFDKFRAQFRPDERSFGYLRMMTGDEMSRR  103 (143)
Q Consensus        29 ~~m~~~~~~~~i~~A~~~Vr~d~~~~nWilf~y~~~--~l~l~~~G~---Gl~El~~~L~dd~v~Ygl~Rv~~~d~~s~r  103 (143)
                      |+|+...-+++|.+||+++|.++  ++|++|+++.+  +|++..+|.   +++||.++|++++++||+||+...++++.+
T Consensus         1 Ma~SGv~v~de~~~af~~lk~~k--~~~vi~~I~~~~~~i~v~~~~~~~~~~~e~~~~L~~~~prY~~y~~~~~~~~~~~   78 (144)
T 2kvk_A            1 MAISGVTLEESVRGAIDDLRMKK--SRYVMMCIGADGKKIEVTEVGERSVNYTDLKEKFSTEKPCYVAFDFEYNDAGSKR   78 (144)
T ss_dssp             CCCCCCEECHHHHHHHHHHHTTS--SSEEEEEECTTSCEEEEEEEECTTCCHHHHHHTCCTTSCCEEEEEEEEEETTEEE
T ss_pred             CCcCCcccCHHHHHHHHHHhcCC--ceEEEEEEeCCCcEEEEEeccCCCCCHHHHHHhCCccCceEEEEEeeeccCCCCc
Confidence            78887777899999999999864  69999999764  688877775   699999999999999999999976777889


Q ss_pred             eeEEEEEeecCCcccccceeeeecHHHHHhhccCCccc
Q psy17893        104 LKFLLITWVGCEVGVIQRAKVSIDKALVKSVITFKFKF  141 (143)
Q Consensus       104 ~KfVfI~WiGe~V~~~~Kar~s~hk~~Vk~~~~~yh~~  141 (143)
                      .|+|||.|||+++|+..||.|++|++.+++.|++++.+
T Consensus        79 ~k~vfI~w~Pd~a~vk~KMlyassk~~lk~~l~~~~~i  116 (144)
T 2kvk_A           79 EKLILIQWIPDTARPREKMMYSASRDALSSVSEGYLPI  116 (144)
T ss_dssp             EEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCTTEEEE
T ss_pred             ccEEEEEECCCCCCHHHHHHHHHHHHHHHHhcCCEEEE
Confidence            99999999999999999999999999999999986543

>2i2q_A Cofilin; N-terminal serine, actin-binding protein; HET: LDA; 1.72A {Schizosaccharomyces pombe}

Probab=99.90  E-value=1.2e-23  Score=154.54  Aligned_cols=108  Identities=16%  Similarity=0.230  Sum_probs=94.1

Q ss_pred             ccccChHHHHHHHHHHHcCCCCccEEEEEeeC--CeEEEeeec--CCHHHHHhccCCCceEEEEEEeEeCCCCcceeeEE
Q psy17893         32 PTTLDSKSIKSAYEDVRSDASQTQWAVFKYQD--SKISCTARG--QSFDKFRAQFRPDERSFGYLRMMTGDEMSRRLKFL  107 (143)
Q Consensus        32 ~~~~~~~~i~~A~~~Vr~d~~~~nWilf~y~~--~~l~l~~~G--~Gl~El~~~L~dd~v~Ygl~Rv~~~d~~s~r~KfV  107 (143)
                      +....+++|.+||+++|.++ .++|++|+|++  ++|++....  .+++||.++|++++++|+++|+....+++.+.|+|
T Consensus         4 sGi~v~~e~~~a~~~~~~~~-~~~~ii~~i~~~~~~i~v~~~~~~~~~~el~~~L~~~~~rY~~~~~~~~~~~~~~~k~v   82 (137)
T 2i2q_A            4 SGVKVSPECLEAFQELKLGK-SLRYVVFKMNDTKTEIVVEKKSTDKDFDTFLGDLPEKDCRYAIYDFEFNLGEGVRNKII   82 (137)
T ss_dssp             SCCEECHHHHHHHHHHHHTC-CCSEEEEEECTTSSEEEEEEEECCCCHHHHHHTSCSSSCEEEEEEEEECSSSSCEEEEE
T ss_pred             CCcccCHHHHHHHHHHHCCC-CceEEEEEECCCCcEEEEecCCCCCCHHHHHHhCCCcCceEEEEEeeeecCCCCccCEE
Confidence            44446899999999999976 69999999987  378887632  38999999999999999999999533333899999


Q ss_pred             EEEeecCCcccccceeeeecHHHHHhhccCCcc
Q psy17893        108 LITWVGCEVGVIQRAKVSIDKALVKSVITFKFK  140 (143)
Q Consensus       108 fI~WiGe~V~~~~Kar~s~hk~~Vk~~~~~yh~  140 (143)
                      ||.|||+++++.+||.|++|++.+++.|+++|+
T Consensus        83 fI~w~Pd~a~vk~KMlyassk~~l~~~l~g~~~  115 (137)
T 2i2q_A           83 FISWSPDVAPIKSKMVYSSSKDTLRRAFTGIGT  115 (137)
T ss_dssp             EEEECCTTSCHHHHHHHHHHHHHHHTTCCCCCE
T ss_pred             EEEECCCCCChhHhhhhHHHHHHHHHHhcCceE
Confidence            999999999999999999999999999998875

>1m4j_A A6 gene product, twinfilin; mixed beta-sheet, PAIR of alpha-helices, structural protein; 1.60A {Mus musculus} SCOP: d.109.1.2

Probab=99.89  E-value=2.5e-23  Score=154.15  Aligned_cols=107  Identities=13%  Similarity=0.239  Sum_probs=91.2

Q ss_pred             ecccccc-ChHHHHHHHHHHHcCCCCccEEEEEeeCCeEEEeeecC-C------HHHHHhcc-CCCceEEEEEEeEeCCC
Q psy17893         29 CVCPTTL-DSKSIKSAYEDVRSDASQTQWAVFKYQDSKISCTARGQ-S------FDKFRAQF-RPDERSFGYLRMMTGDE   99 (143)
Q Consensus        29 ~~m~~~~-~~~~i~~A~~~Vr~d~~~~nWilf~y~~~~l~l~~~G~-G------l~El~~~L-~dd~v~Ygl~Rv~~~d~   99 (143)
                      |+|+..+ .+++|.++|+++|.++  ++|++|++++++|++..+|. +      ++||++.| ++++++|+++|+....+
T Consensus         1 Msm~SGi~v~~e~~~~f~~~k~~k--~~~ii~~i~~~~ivv~~~~~~~~~~~~~~~e~~~~l~~~~~~rY~~~~~~~~~~   78 (142)
T 1m4j_A            1 MSHQTGIQASEDVKEIFARARNGK--YRLLKISIENEQLVVGSCSPPSDSWEQDYDSFVLPLLEDKQPCYVLFRLDSQNA   78 (142)
T ss_dssp             ------CCBCHHHHHHHHHHHTTT--CSEEEEEECSSSEEEEEEECCCSCHHHHHHHHHGGGCCTTCCEEEEEEEEEEET
T ss_pred             CCCcCCCeECHHHHHHHHHHhcCC--eEEEEEEEcCCEEEEEeecCCCccccccHHHHHHhhCCCCCceEEEEEcCcCCC
Confidence            4555433 6899999999999875  89999999998999998887 4      89999998 68999999999984332


Q ss_pred             CcceeeEEEEEeecCCcccccceeeeecHHHHHhhccCCc
Q psy17893        100 MSRRLKFLLITWVGCEVGVIQRAKVSIDKALVKSVITFKF  139 (143)
Q Consensus       100 ~s~r~KfVfI~WiGe~V~~~~Kar~s~hk~~Vk~~~~~yh  139 (143)
                        .+.|+|||+|+|+++++.+||.|+++++.+++.|++.|
T Consensus        79 --~~~k~vfI~w~Pd~a~vr~KMlYAssk~~lk~~l~g~~  116 (142)
T 1m4j_A           79 --QGYEWIFIAWSPDHSHVRQKMLYAATRATLKKEFGGGH  116 (142)
T ss_dssp             --TEEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHHCGGG
T ss_pred             --CCceEEEEEEcCCCCCHHHHHHHHHHHHHHHHHcCCce
Confidence              36999999999999999999999999999999999887

>2d8b_A Twinfilin-1; cell-free protein synthesis, actin-binding protein, developmental regulation, cellular remodeling, cytoskeleton, morphology; NMR {Mus musculus}

Probab=99.88  E-value=7e-23  Score=156.05  Aligned_cols=113  Identities=12%  Similarity=0.100  Sum_probs=97.5

Q ss_pred             hhCCCCCceecccccc--ChHHHHHHHHHHHcCCCCccEEEEEeeCC--eEEEeeecC-CHHHHHhccCCCceEEEEEEe
Q psy17893         20 MSVPMTPRKCVCPTTL--DSKSIKSAYEDVRSDASQTQWAVFKYQDS--KISCTARGQ-SFDKFRAQFRPDERSFGYLRM   94 (143)
Q Consensus        20 ~~~~~~~~~~~m~~~~--~~~~i~~A~~~Vr~d~~~~nWilf~y~~~--~l~l~~~G~-Gl~El~~~L~dd~v~Ygl~Rv   94 (143)
                      .++..+.|+  |+...  .+++|.+||+++|.+  .++|++|+|+++  +|+|..+|. +++||.+.|++++++|++||+
T Consensus        13 ~~~~~~~~~--~sgv~~~v~~e~~~a~~~lk~~--~~~~vifkId~~~~~I~v~~~~~~~~~el~~~Lp~~~pRY~~y~~   88 (166)
T 2d8b_A           13 VSVDTKHQT--LQGVAFPISRDAFQALEKLSKK--QLNYVQLEIDIKNETIILANTENTELRDLPKRIPKDSARYHFFLY   88 (166)
T ss_dssp             CSCCCCCSC--SCCCCCCBCHHHHHHHHHHHTT--CCSCCEEEEETTTTEEEEEECCCCCSTTHHHHSCSSCCEEEEEEE
T ss_pred             cccccCccc--cCCcccCcCHHHHHHHHHHHcC--CCcEEEEEEeCCCCEEEEEecCCCCHHHHHHhCCCCCceEEEEec
Confidence            344455554  55444  599999999999996  689999999883  799999888 899999999999999999999


Q ss_pred             EeCCCCcceeeEEEEEeecC-CcccccceeeeecHHHHHhhcc
Q psy17893         95 MTGDEMSRRLKFLLITWVGC-EVGVIQRAKVSIDKALVKSVIT  136 (143)
Q Consensus        95 ~~~d~~s~r~KfVfI~WiGe-~V~~~~Kar~s~hk~~Vk~~~~  136 (143)
                      ....++.++.|+|||.|||+ ++++..||.|+++|+.+++.++
T Consensus        89 ~~~~~~~~~~k~vFI~w~P~~~~~ik~KMlYAssk~~l~~~l~  131 (166)
T 2d8b_A           89 KHSHEGDYLESVVFIYSMPGYTCSIRERMLYSSCKSPLLEIVE  131 (166)
T ss_dssp             EEEETTEEEEEEEEEEECCCSSSCHHHHHHHHHTTHHHHHHHT
T ss_pred             cccCCCCccccEEEEEECCCCCCCHHHeeehhhhHHHHHHHHh
Confidence            84333347999999999999 9999999999999999999999

>1v6f_A MGMF-beta, GLIA maturation factor, beta; actin binding protein, cytoskeleton, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.109.1.2

Probab=99.88  E-value=1.4e-22  Score=151.98  Aligned_cols=104  Identities=10%  Similarity=0.007  Sum_probs=93.0

Q ss_pred             ChHHHHHHHHHHHcCCC-CccEEEEEeeCC--eEEEeeecC--CHHHHHhccCCCceEEEEEEeE-eCCCCcceeeEEEE
Q psy17893         36 DSKSIKSAYEDVRSDAS-QTQWAVFKYQDS--KISCTARGQ--SFDKFRAQFRPDERSFGYLRMM-TGDEMSRRLKFLLI  109 (143)
Q Consensus        36 ~~~~i~~A~~~Vr~d~~-~~nWilf~y~~~--~l~l~~~G~--Gl~El~~~L~dd~v~Ygl~Rv~-~~d~~s~r~KfVfI  109 (143)
                      .+++|.+||+++|.+++ .++|++|+|+++  +|+|..+|.  +++||.++|++++++|+++|+. ...+++.+.|+|||
T Consensus        16 v~~e~~~a~~~lr~~k~~~~~~iifki~~~~~~I~v~~~~~~~~~~el~~~Lp~~~prY~~~~~~~~~~~~~~~~k~vfI   95 (151)
T 1v6f_A           16 VAEDLVEKLRKFRFRKETHNAAIIMKIDKDERLVVLDEELEGVSPDELKDELPERQPRFIVYSYKYQHDDGRVSYPLCFI   95 (151)
T ss_dssp             ECHHHHHHHHHHHTCCCSSCEEEEEEECSSSCEEEEEEEEESCCHHHHGGGSCSSSCEEEEEECCEECTTSCEECCEEEE
T ss_pred             ECHHHHHHHHHHHhccCCCccEEEEEEcCCCcEEEEEecCCCCCHHHHHhhCCCCCceEEEEecccccCCCcccccEEEE
Confidence            57899999999999774 689999999884  699988774  8999999999999999999998 34556779999999


Q ss_pred             EeecCCcccccceeeeecHHHHHhhccCCcc
Q psy17893        110 TWVGCEVGVIQRAKVSIDKALVKSVITFKFK  140 (143)
Q Consensus       110 ~WiGe~V~~~~Kar~s~hk~~Vk~~~~~yh~  140 (143)
                      .|||+++++..||.|+++++.+++.+ ++|+
T Consensus        96 ~w~P~~a~vk~KMlYAssk~~l~~~l-gi~~  125 (151)
T 1v6f_A           96 FSSPVGCKPEQQMMYAGSKNKLVQTA-ELTK  125 (151)
T ss_dssp             EECCTTSCHHHHHHHHHHHHHHHHHT-TCSE
T ss_pred             EECCCCCChHHheehHHHHHHHHHHh-CCeE
Confidence            99999999999999999999999999 5654

>2w0i_A Twinfilin-2; cytoskeleton, actin-binding, actin binding, cofilin-like, phosphoprotein, phosphorylation, transferase, protein tyros kinase-9; 1.8A {Homo sapiens}

Probab=99.88  E-value=1.2e-22  Score=149.50  Aligned_cols=98  Identities=9%  Similarity=0.107  Sum_probs=90.6

Q ss_pred             hHHHHHHHHHHHcCCCCccEEEEEeeCC--eEEEeeecC-CHHHHHhccCCCceEEEEEEeEeCCCCcceeeEEEEEeec
Q psy17893         37 SKSIKSAYEDVRSDASQTQWAVFKYQDS--KISCTARGQ-SFDKFRAQFRPDERSFGYLRMMTGDEMSRRLKFLLITWVG  113 (143)
Q Consensus        37 ~~~i~~A~~~Vr~d~~~~nWilf~y~~~--~l~l~~~G~-Gl~El~~~L~dd~v~Ygl~Rv~~~d~~s~r~KfVfI~WiG  113 (143)
                      +++|.+||+++|.++  ++|++|+++++  +|+|..+|. +++||.+.|++++++|+++|+....+++.+.|+|||.|||
T Consensus         5 ~~e~~~a~~~lk~~~--~~~ii~~id~~~~~I~v~~~~~~~~~el~~~Lp~~~~rY~~y~~~~~~~~~~~~k~vfI~w~P   82 (135)
T 2w0i_A            5 QPEAQRALQQLKQKM--VNYIQMKLDLERETIELVHTEPTDVAQLPSRVPRDAARYHFFLYKHTHEGDPLESVVFIYSMP   82 (135)
T ss_dssp             CHHHHHHHHHHHTTS--CSEEEEEEETTTTEEEEEECCCCCGGGGGGGSCSSSCEEEEEEEEEEETTEEEEEEEEEEECC
T ss_pred             CHHHHHHHHHHHcCC--CcEEEEEEeCCCCEEEEEecCCCCHHHHHhhCCCCCcEEEEEecccccCCCCCccEEEEEECC
Confidence            789999999999965  99999999874  799998888 8999999999999999999999544455899999999999


Q ss_pred             C-CcccccceeeeecHHHHHhhcc
Q psy17893        114 C-EVGVIQRAKVSIDKALVKSVIT  136 (143)
Q Consensus       114 e-~V~~~~Kar~s~hk~~Vk~~~~  136 (143)
                      + ++++..||.||++++.+++.++
T Consensus        83 ~~~~~vk~kMlYassk~~l~~~l~  106 (135)
T 2w0i_A           83 GYKCSIKERMLYSSCKSRLLDSVE  106 (135)
T ss_dssp             GGGSCHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCHHHHhHhHHhHHHHHHHHh
Confidence            9 9999999999999999999998

>2lj8_A Cofilin/actin depolymerizing factor, putative; protein binding; NMR {Trypanosoma brucei}

Probab=99.88  E-value=2.6e-22  Score=149.53  Aligned_cols=112  Identities=13%  Similarity=0.187  Sum_probs=98.6

Q ss_pred             eeccccccChHHHHHHHHHHHcCCCCccEEEEEeeCC-eEEEeeecC---CHHHHHhccCCCceEEEEEEeEeCCCCcce
Q psy17893         28 KCVCPTTLDSKSIKSAYEDVRSDASQTQWAVFKYQDS-KISCTARGQ---SFDKFRAQFRPDERSFGYLRMMTGDEMSRR  103 (143)
Q Consensus        28 ~~~m~~~~~~~~i~~A~~~Vr~d~~~~nWilf~y~~~-~l~l~~~G~---Gl~El~~~L~dd~v~Ygl~Rv~~~d~~s~r  103 (143)
                      -|+|+..--+++|.+||++++..+  ++|++|..+++ ++++...|.   +++||.+.|++++++|+++|+....+++.+
T Consensus         8 ~Ma~SGi~vsde~~~af~~lk~~k--~~~ii~~i~d~~~~vv~~~~~~~~~~de~~~~L~~~~prY~~y~~~~~~~~~~~   85 (144)
T 2lj8_A            8 HMAMSGVSVADECVTALNDLRHKK--SRYVIMHIVDQKSIAVKTIGERGANFDQFIEAIDKNVPCYAAFDFEYTTNDGPR   85 (144)
T ss_dssp             -CCCSSCEECHHHHHHHHHHTTTS--SSEEEEEEETTTEEEEEEECSSCCCHHHHHHHCCSSSCEEEEEEEEECSSSSSE
T ss_pred             ccccCCceeCHHHHHHHHHHhcCC--ceEEEEEEECCcEEEEEecCCCCCCHHHHHHhCcccCCcceeeeeeeccCCCCc
Confidence            489987777899999999999754  79999999775 666666554   799999999999999999999966666778


Q ss_pred             eeEEEEEeecCCcccccceeeeecHHHHHhhccCCccc
Q psy17893        104 LKFLLITWVGCEVGVIQRAKVSIDKALVKSVITFKFKF  141 (143)
Q Consensus       104 ~KfVfI~WiGe~V~~~~Kar~s~hk~~Vk~~~~~yh~~  141 (143)
                      .|+|||.|||+++|+..||.|+++++++++.|+++|.+
T Consensus        86 ~k~vfI~w~Pd~a~vk~KMlYASsk~~l~~~l~~~~~i  123 (144)
T 2lj8_A           86 DKLILISWNPDSGAPRTKMLYSSSRDALVPLTQGFQGI  123 (144)
T ss_dssp             EEEEEEEECCTTSCHHHHHHHHHHHHHHHHHTTTSEEE
T ss_pred             ccEEEEEEcCCCCCHHHHHHHHHHHHHHHHHhCCeeEE
Confidence            99999999999999999999999999999999999864

>1vkk_A GMF-gamma, GLIA maturation factor gamma; 15079298, structural GEN JCSG, protein structure initiative, PSI, joint center for S genomics; 1.35A {Mus musculus} SCOP: d.109.1.2 PDB: 1wfs_A 3l50_A

Probab=99.88  E-value=1.5e-22  Score=152.61  Aligned_cols=105  Identities=10%  Similarity=-0.004  Sum_probs=92.8

Q ss_pred             ccChHHHHHHHHHHHcCC-CCccEEEEEeeCC--eEEEeeecC--CHHHHHhccCCCceEEEEEEeE-eCCCCcceeeEE
Q psy17893         34 TLDSKSIKSAYEDVRSDA-SQTQWAVFKYQDS--KISCTARGQ--SFDKFRAQFRPDERSFGYLRMM-TGDEMSRRLKFL  107 (143)
Q Consensus        34 ~~~~~~i~~A~~~Vr~d~-~~~nWilf~y~~~--~l~l~~~G~--Gl~El~~~L~dd~v~Ygl~Rv~-~~d~~s~r~KfV  107 (143)
                      .-.+++|.+||+++|.++ ..++|++|+++++  +|+|..+|.  +++||.+.|++++++|++||+. ...+++.+.|+|
T Consensus        20 ~~v~~e~~~a~~~lk~~k~~~~~~iifkId~~~~~I~v~~~~~~~~~~e~~~~Lp~~~pRY~vy~~~~~~~~g~~~~klv   99 (154)
T 1vkk_A           20 CEVDPELKETLRKFRFRKETNNAAIIMKVDKDRQMVVLEDELQNISPEELKLELPERQPRFVVYSYKYVHDDGRVSYPLC   99 (154)
T ss_dssp             CEECHHHHHHHHHHHTCCCCSCEEEEEEEETTTTEEEEEEEEESCCHHHHHHHSCSSSCEEEEEECCEECTTSCEECCEE
T ss_pred             eeeCHHHHHHHHHHHhcccCCccEEEEEEcCCCCEEEEEEcCCCCCHHHHHHhCCCCCcEEEEEEeeeccCCCcccccEE
Confidence            335889999999999876 3799999999874  798887653  8999999999999999999998 445567899999


Q ss_pred             EEEeecCCcccccceeeeecHHHHHhhccCCc
Q psy17893        108 LITWVGCEVGVIQRAKVSIDKALVKSVITFKF  139 (143)
Q Consensus       108 fI~WiGe~V~~~~Kar~s~hk~~Vk~~~~~yh  139 (143)
                      ||.|||+++++..||.||++++.+++.| +.|
T Consensus       100 FI~w~P~~a~vk~KMlYAssk~~l~~~l-gi~  130 (154)
T 1vkk_A          100 FIFSSPVGCKPEQQMMYAGSKNRLVQTA-ELT  130 (154)
T ss_dssp             EEEECCTTSCHHHHHHHHHHHHHHHHHT-TCC
T ss_pred             EEEECCCCCChhhhhhhHhhHHHHHHhh-Cce
Confidence            9999999999999999999999999999 554

>1ak6_A Destrin; actin depolymerization factor, actin-binding protein; NMR {Homo sapiens} SCOP: d.109.1.2 PDB: 1ak7_A 1q8g_A 1q8x_A 3j0s_M

Probab=99.87  E-value=9.9e-24  Score=161.81  Aligned_cols=117  Identities=11%  Similarity=0.186  Sum_probs=100.4

Q ss_pred             CCCceeccccccC-hHHHHHHHHHHHcCCC--------CccEEEEEeeCC--eEEEeee--------c---C-CHHHHHh
Q psy17893         24 MTPRKCVCPTTLD-SKSIKSAYEDVRSDAS--------QTQWAVFKYQDS--KISCTAR--------G---Q-SFDKFRA   80 (143)
Q Consensus        24 ~~~~~~~m~~~~~-~~~i~~A~~~Vr~d~~--------~~nWilf~y~~~--~l~l~~~--------G---~-Gl~El~~   80 (143)
                      .+||.|+|+..+. +++|.++|+++|.+++        .++|++|+++++  .|++...        |   . +++||++
T Consensus         3 ~~~~~m~m~SGi~vs~e~~~~f~~~k~~ks~~~~~~~~~~~~iifki~~~~~~Iivee~~~~~~~~~g~~~~~~~~ef~~   82 (174)
T 1ak6_A            3 ITPSSGNSASGVQVADEVCRIFYDMKVRKCSTPEEIKKRKKAVIFCLSADKKCIIVEEGKEILVGDVGVTITDPFKHFVG   82 (174)
T ss_dssp             CCCCCSTTTTCCCCCSHHHHHHHHTSSSCCSSHHHHGGGCCCEECCCSTTSCSCCCCSSCCCCSSSTTTTCCSSSHHHHH
T ss_pred             cCcCcccccCCCccCHHHHHHHHHHHcCCcccccccccceeEEEEEECCCCcEEEEeccccccccccCcccCCCHHHHHH
Confidence            3678899886555 9999999999999864        688999999884  5777652        3   3 7999999


Q ss_pred             ccCCCceEEEEEEeEeCCCCcceeeEEEEEeecCCcccccceeeeecHHHHHhhccCCcc
Q psy17893         81 QFRPDERSFGYLRMMTGDEMSRRLKFLLITWVGCEVGVIQRAKVSIDKALVKSVITFKFK  140 (143)
Q Consensus        81 ~L~dd~v~Ygl~Rv~~~d~~s~r~KfVfI~WiGe~V~~~~Kar~s~hk~~Vk~~~~~yh~  140 (143)
                      .|++++++|++||+.....++.+.|+|||.|||+++++.+||.||++++.+++.|+++|+
T Consensus        83 ~L~~~~prY~ly~~~~~~~~~~~~klvfI~W~Pd~a~vk~KMlYAssk~~lk~~l~gi~~  142 (174)
T 1ak6_A           83 MLPEKDCRYALYDASFETKESRKEELMFFLWAPELAPLKSKMIYASSKDAIKKKFQGIKH  142 (174)
T ss_dssp             TSCSSCCCCEECCCCCCCSSCSCCCCCEEEECCSSSCHHHHHSHHHHHHHHHHHCTTCSC
T ss_pred             hCCCCCcEEEEEeCcccCCCCccccEEEEEECCCCCCHHHhhHHHHHHHHHHHHhcCCeE
Confidence            999999999999997433345899999999999999999999999999999999988764

>2vac_A Twinfilin-2; transferase, actin binding, phosphorylation, cofilin-like, cytoskeleton, actin-binding, protein tyrosine kinase-9; 1.70A {Homo sapiens}

Probab=99.86  E-value=5.6e-22  Score=145.59  Aligned_cols=100  Identities=12%  Similarity=0.225  Sum_probs=90.4

Q ss_pred             ChHHHHHHHHHHHcCCCCccEEEEEeeCCeEEEeeecC-C------HHHHHhcc-CCCceEEEEEEeEeCCCCcceeeEE
Q psy17893         36 DSKSIKSAYEDVRSDASQTQWAVFKYQDSKISCTARGQ-S------FDKFRAQF-RPDERSFGYLRMMTGDEMSRRLKFL  107 (143)
Q Consensus        36 ~~~~i~~A~~~Vr~d~~~~nWilf~y~~~~l~l~~~G~-G------l~El~~~L-~dd~v~Ygl~Rv~~~d~~s~r~KfV  107 (143)
                      -+++|.++|+++|.++  ++|++|++++++|++..+|. +      ++||++.| ++++++|+++|+....+  .+.|+|
T Consensus         6 v~~e~~~~f~~~k~~k--~r~ii~~i~~~~ivv~~~~~~~~~~~~~~~~~~~~l~~~~~prY~v~~~~~~~~--~~~k~v   81 (134)
T 2vac_A            6 ATEELKEFFAKARAGS--VRLIKVVIEDEQLVLGASQEPVGRWDQDYDRAVLPLLDAQQPCYLLYRLDSQNA--QGFEWL   81 (134)
T ss_dssp             ECHHHHHHHHHHHHSS--CSEEEEEEETTEEEEEEEECCCSCHHHHHHHHHGGGCCTTCCEEEEEEEEEEET--TEEEEE
T ss_pred             eCHHHHHHHHHHhcCC--eEEEEEEecCCEEEEEeecCcCcccccCHHHHHHhcCCCCCCEEEEEECCcCCC--CCceEE
Confidence            4799999999999876  89999999999999998887 4      79999998 68999999999984332  259999


Q ss_pred             EEEeecCCcccccceeeeecHHHHHhhccCCc
Q psy17893        108 LITWVGCEVGVIQRAKVSIDKALVKSVITFKF  139 (143)
Q Consensus       108 fI~WiGe~V~~~~Kar~s~hk~~Vk~~~~~yh  139 (143)
                      ||+|+|+++++.+||.||++++.+++.|++.|
T Consensus        82 fI~w~Pd~a~vr~KMlYAssk~~lk~~l~g~~  113 (134)
T 2vac_A           82 FLAWSPDNSPVRLKMLYAATRATVKKEFGGGH  113 (134)
T ss_dssp             EEEECCTTSCHHHHHHHHHHHHHHHHHHCGGG
T ss_pred             EEEEcCCCCCHHHHhHHHHHHHHHHHHcCCCe
Confidence            99999999999999999999999999999877

>1tvj_A Cofilin; ADF, actin binding protein, actin depolymerizing factor, actin-binding protein; NMR {Gallus gallus}

Probab=99.86  E-value=9e-22  Score=149.79  Aligned_cols=107  Identities=12%  Similarity=0.202  Sum_probs=92.8

Q ss_pred             ccChHHHHHHHHHHHcCCC--------CccEEEEEeeCC--eEEEee--------ec---C-CHHHHHhccCCCceEEEE
Q psy17893         34 TLDSKSIKSAYEDVRSDAS--------QTQWAVFKYQDS--KISCTA--------RG---Q-SFDKFRAQFRPDERSFGY   91 (143)
Q Consensus        34 ~~~~~~i~~A~~~Vr~d~~--------~~nWilf~y~~~--~l~l~~--------~G---~-Gl~El~~~L~dd~v~Ygl   91 (143)
                      ..-+++|.++|+++|.+++        .++|++|+++++  .|++.+        .|   . +++||++.|++++++|++
T Consensus         5 i~vs~e~~~~f~~~k~~k~~~~~~~~~~~~~iifki~~~~~~iivee~~~~~~~~~~~~~~~~~~ef~~~L~~~~prY~v   84 (166)
T 1tvj_A            5 VTVNDEVIKVFNDMKVRKSSTPEEIKKRKKAVLFCLSDDKKQIIVEEAKQILVGDIGDTVEDPYTAFVKLLPLNDCRYAL   84 (166)
T ss_dssp             CEECHHHHHHHHHHHSCCCSCHHHHTTCEEEEEEEECTTSSEEEEEEEEEEETTTBTTTBSCHHHHHHHHCCTTSCEEEE
T ss_pred             CeeCHHHHHHHHHHhcCCCccccccccceeEEEEEECCCCcEEEEeccccccccccCccccCCHHHHHHhCCCCCcEEEE
Confidence            3358999999999999864        689999999884  677776        45   3 799999999999999999


Q ss_pred             EEeEeCCCCcceeeEEEEEeecCCcccccceeeeecHHHHHhhccCCcc
Q psy17893         92 LRMMTGDEMSRRLKFLLITWVGCEVGVIQRAKVSIDKALVKSVITFKFK  140 (143)
Q Consensus        92 ~Rv~~~d~~s~r~KfVfI~WiGe~V~~~~Kar~s~hk~~Vk~~~~~yh~  140 (143)
                      ||+.....++.+.|+|||.|||+++++.+||.||++++.+++.|++.|+
T Consensus        85 y~~~~~~~~~~~~klvfI~W~Pd~a~vr~KMlYAssk~~lk~~l~gi~~  133 (166)
T 1tvj_A           85 YDATYETKESKKEDLVFIFWAPESAPLKSKMIYASSKDAIKKKFTGIKH  133 (166)
T ss_dssp             EEEEEEESSCEEEEEEEEEECCTTSCHHHHHHHHHHHHHHHHTTTTCCC
T ss_pred             EeccccCCCCCccCEEEEEECCCCCCHHHhhHHHHhHHHHHHHhcCCeE
Confidence            9998432235899999999999999999999999999999999988764

>2l72_A Tgadf, actin depolymerizing factor, putative; ADF/cofilin, actin binding, protein binding; NMR {Toxoplasma gondii}

Probab=99.86  E-value=7.2e-22  Score=146.94  Aligned_cols=103  Identities=17%  Similarity=0.291  Sum_probs=91.6

Q ss_pred             ecccccc-ChHHHHHHHHHHHcCCCCccEEEEEeeCCeEEEeeecC-CHHHHHhccCCCceEEEEEEeEeCCCCcceeeE
Q psy17893         29 CVCPTTL-DSKSIKSAYEDVRSDASQTQWAVFKYQDSKISCTARGQ-SFDKFRAQFRPDERSFGYLRMMTGDEMSRRLKF  106 (143)
Q Consensus        29 ~~m~~~~-~~~~i~~A~~~Vr~d~~~~nWilf~y~~~~l~l~~~G~-Gl~El~~~L~dd~v~Ygl~Rv~~~d~~s~r~Kf  106 (143)
                      |+|+..+ .+++|.+||+++|.++ .++|++|++++++|++..+|+ +++||.+.|++++++|++||    + +   .|+
T Consensus        20 ~~m~sGi~vs~e~~~af~~lk~~k-~~~~ii~~I~~~eivv~~~g~~~~~el~~~Lp~~~prY~~y~----d-g---~k~   90 (139)
T 2l72_A           20 RHMASGMGVDENCVARFNELKIRK-TVKWIVFKIENTKIVVEKDGKGNADEFRGALPANDCRFGVYD----C-G---NKI   90 (139)
T ss_dssp             --CCTTCEECHHHHHHHHHHTTTT-CCCEEEEEEETTEEEEEEEESSHHHHHHHHCCCCSCCEEEEE----C-S---SCE
T ss_pred             ccccCCCCcCHHHHHHHHHHhCCC-CeeEEEEEEcCCEEEEeecCCCCHHHHHHhCCCCCcEEEEEc----C-C---CcE
Confidence            5555433 6999999999999876 689999999998899988888 89999999999999999999    2 2   799


Q ss_pred             EEEEeecCCcccccceeeeecHHHHHhhccCCcc
Q psy17893        107 LLITWVGCEVGVIQRAKVSIDKALVKSVITFKFK  140 (143)
Q Consensus       107 VfI~WiGe~V~~~~Kar~s~hk~~Vk~~~~~yh~  140 (143)
                      |||.|||+++++.+||.|+++++.+++.|++.|.
T Consensus        91 vFI~w~Pd~a~vk~KMlYASsk~~lk~~l~g~~v  124 (139)
T 2l72_A           91 QFVLWCPDNAPVKPRMTYASSKDALLKKLDGATA  124 (139)
T ss_dssp             EEEEECCTTSCHHHHHHHHHHHHHHHHHHCSCCS
T ss_pred             EEEEECCCCCChhHeeehHhhHHHHHHHhCCceE
Confidence            9999999999999999999999999999998764

>3q2b_A Pfadf1, cofilin/actin-depolymerizing factor homolog 1; actin regulator, actin-binding protein; HET: TAR; 1.60A {Plasmodium falciparum} PDB: 2xf1_A

Probab=99.79  E-value=1.1e-19  Score=132.43  Aligned_cols=100  Identities=9%  Similarity=0.149  Sum_probs=91.1

Q ss_pred             ccccChHHHHHHHHHHHcCCCCccEEEEEeeCCeEEEeeecC--CHHHHHhccCCCc---eEEEEEEeEeCCCCcceeeE
Q psy17893         32 PTTLDSKSIKSAYEDVRSDASQTQWAVFKYQDSKISCTARGQ--SFDKFRAQFRPDE---RSFGYLRMMTGDEMSRRLKF  106 (143)
Q Consensus        32 ~~~~~~~~i~~A~~~Vr~d~~~~nWilf~y~~~~l~l~~~G~--Gl~El~~~L~dd~---v~Ygl~Rv~~~d~~s~r~Kf  106 (143)
                      +...-+++|.++++++|.++ .++|++|++++++|++..+|.  .++||.+.|++++   ++|+++|+        +.|+
T Consensus         5 SGi~vs~e~~~~f~~lk~~k-~~~~ii~kI~~~~ivv~~~~~~~~~~~f~~~Lp~~~~~~prY~vy~~--------~~k~   75 (124)
T 3q2b_A            5 SGIRVNDNCVTEFNNMKIRK-TCGWIIFVIQNCEIIIHSKGASTTLTELVQSIDKNNEIQCAYVVFDA--------VSKI   75 (124)
T ss_dssp             CSCEECHHHHHHHHHHHHHT-SSEEEEEEEETTEEEEEEEEECSCHHHHHHHHHHCTTCSEEEEEEEC--------SSCE
T ss_pred             CCCccCHHHHHHHHHHhcCC-CcEEEEEEEcCCEEEEeccCCCCCHHHHHHHccccCCCCcEEEEEec--------CCCE
Confidence            34446899999999999865 489999999999999988886  8999999999999   99999998        4799


Q ss_pred             EEEEeecCCcccccceeeeecHHHHHhhccCCcc
Q psy17893        107 LLITWVGCEVGVIQRAKVSIDKALVKSVITFKFK  140 (143)
Q Consensus       107 VfI~WiGe~V~~~~Kar~s~hk~~Vk~~~~~yh~  140 (143)
                      |||.|||+++++..||.||+.++.+++.|++.|.
T Consensus        76 vfI~w~Pd~a~vk~KMlYASsk~~l~~~l~g~~~  109 (124)
T 3q2b_A           76 HFFMYARESSNSRDRMTYASSKQAILKKIEGVNV  109 (124)
T ss_dssp             EEEEEECTTSCHHHHHHHHHHHHHHHTTSTTSEE
T ss_pred             EEEEECCCCCChhHhhhhHHHHHHHHHHhCCCce
Confidence            9999999999999999999999999999999885

>3daw_B Twinfilin-1, protein A6; actin depolymerisation, actin binding proteins, cytoskeleton, structural protein/contractIle protein complex; HET: ATP; 2.55A {Mus musculus} PDB: 2hd7_A

Probab=99.66  E-value=2.4e-16  Score=119.93  Aligned_cols=99  Identities=11%  Similarity=0.106  Sum_probs=86.9

Q ss_pred             ChHHHHHHHHHHHcCCCCccEEEEEeeCC--eEEEeeecC-CHHHHHhccCCCceEEEEEEeEeCCCCcceeeEEEEEee
Q psy17893         36 DSKSIKSAYEDVRSDASQTQWAVFKYQDS--KISCTARGQ-SFDKFRAQFRPDERSFGYLRMMTGDEMSRRLKFLLITWV  112 (143)
Q Consensus        36 ~~~~i~~A~~~Vr~d~~~~nWilf~y~~~--~l~l~~~G~-Gl~El~~~L~dd~v~Ygl~Rv~~~d~~s~r~KfVfI~Wi  112 (143)
                      -+++|.+||+++|.+  ..+|++|+++.+  +|+|..++. +++||.+.|++++++|++||+....++....+.|||.||
T Consensus        24 v~~e~~~a~~~lk~~--~~~~iifkId~~~e~I~v~~~~~~~~~df~~~Lp~~~pRY~vyd~~~~~~g~~~~~~ifi~~~  101 (164)
T 3daw_B           24 ISRDAFQALEKLSKK--QLNYVQLEIDIKNETIILANTENTELRDLPKRIPKDSARYHFFLYKHSHEGDYLESVVFIYSM  101 (164)
T ss_dssp             BCHHHHHHHHHHHTT--SCSEEEEEEETTTTEEEEEECCCCCGGGSGGGSCSSSCEEEEEEEEEEETTEEEEEEEEEEEC
T ss_pred             ECHHHHHHHHHHHcC--CceEEEEEEeCCCCEEEEEeCCCCCHHHHHHhCCccCceEEEEecccccCCCccccEEEEEEc
Confidence            488999999999986  489999999874  788877754 899999999999999999999953334456778999999


Q ss_pred             cC-CcccccceeeeecHHHHHhhcc
Q psy17893        113 GC-EVGVIQRAKVSIDKALVKSVIT  136 (143)
Q Consensus       113 Ge-~V~~~~Kar~s~hk~~Vk~~~~  136 (143)
                      |+ ++++..||.||+.|+.+++.++
T Consensus       102 P~~~a~ik~kMlYASsK~~l~~~l~  126 (164)
T 3daw_B          102 PGYTCSIRERMLYSSCKSPLLEIVE  126 (164)
T ss_dssp             CSTTSCHHHHHHHHHTHHHHHHHHH
T ss_pred             CCCCCCHHHHHHHHHhHHHHHHHHh
Confidence            99 9999999999999999999987

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	143
d1t3ya1	130	d.109.1.2 (A:2-131) Coactosin-like protein Cotl1 (	3e-26
d1hqz1_	139	d.109.1.2 (1:) Cofilin-like domain of actin-bindin	8e-16
d1cnua_	134	d.109.1.2 (A:) Cofilin (actin depolymerizing facto	7e-10
d1q8ga_	166	d.109.1.2 (A:) Cofilin (actin depolymerizing facto	6e-04

>d1t3ya1 d.109.1.2 (A:2-131) Coactosin-like protein Cotl1 (Clp) {Human (Homo sapiens) [TaxId: 9606]} Length = 130

class: Alpha and beta proteins (a+b)
fold: Gelsolin-like
superfamily: Actin depolymerizing proteins
family: Cofilin-like
domain: Coactosin-like protein Cotl1 (Clp)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 93.8 bits (233), Expect = 3e-26
 Identities = 45/104 (43%), Positives = 58/104 (55%)

Query: 33  TTLDSKSIKSAYEDVRSDASQTQWAVFKYQDSKISCTARGQSFDKFRAQFRPDERSFGYL 92
           T +D ++ ++AY  VR D S   W  FKY  S I    +G  +  F  Q   D R F ++
Sbjct: 2   TKIDKEACRAAYNLVRDDGSAVIWVTFKYDGSTIVPGEQGAEYQHFIQQCTDDVRLFAFV 61

Query: 93  RMMTGDEMSRRLKFLLITWVGCEVGVIQRAKVSIDKALVKSVIT 136
           R  TGD MS+R KF LITW+G  V  +QRAK   DK LVK V+ 
Sbjct: 62  RFTTGDAMSKRSKFALITWIGENVSGLQRAKTGTDKTLVKEVVQ 105

>d1hqz1_ d.109.1.2 (1:) Cofilin-like domain of actin-binding protein abp1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 139

class: Alpha and beta proteins (a+b)
fold: Gelsolin-like
superfamily: Actin depolymerizing proteins
family: Cofilin-like
domain: Cofilin-like domain of actin-binding protein abp1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 67.2 bits (164), Expect = 8e-16
 Identities = 22/99 (22%), Positives = 36/99 (36%), Gaps = 4/99 (4%)

Query: 37  SKSIKSAYEDV-RSDASQTQWAVFKYQDSK-ISCTARGQSFDKFRAQFRPDERSFGYLRM 94
           S+ I + Y  + R     T W +      K     + G SF  F   F   +  +G  R+
Sbjct: 10  SREIDAEYLKIVRGSDPDTTWLIISPNAKKEYEPESTGSSFHDFLQLFDETKVQYGLARV 69

Query: 95  MTGDEMSRRLKFLLITWVGCEVGVIQRAKVSIDKALVKS 133
                 S   K ++I W      +  RA  + + A V +
Sbjct: 70  --SPPGSDVEKIIIIGWCPDSAPLKTRASFAANFAAVAN 106

>d1cnua_ d.109.1.2 (A:) Cofilin (actin depolymerizing factor, ADF) {Acanthamoeba castellanii, actophorin [TaxId: 5755]} Length = 134

class: Alpha and beta proteins (a+b)
fold: Gelsolin-like
superfamily: Actin depolymerizing proteins
family: Cofilin-like
domain: Cofilin (actin depolymerizing factor, ADF)
species: Acanthamoeba castellanii, actophorin [TaxId: 5755]

 Score = 51.4 bits (123), Expect = 7e-10
 Identities = 13/105 (12%), Positives = 33/105 (31%), Gaps = 6/105 (5%)

Query: 37  SKSIKSAYEDVRSDASQTQWAVFKYQDSKISCT-----ARGQSFDKFRAQFRPDERSFGY 91
           S      + +++    Q ++  FK   S              +++ F++Q    +  +  
Sbjct: 5   SDDCVQKFNELKLG-HQHRYVTFKMNASNTEVVVEHVGGPNATYEDFKSQLPERDCRYAI 63

Query: 92  LRMMTGDEMSRRLKFLLITWVGCEVGVIQRAKVSIDKALVKSVIT 136
                  +  +R K   I W      +  +   +  K  +K  + 
Sbjct: 64  FDYEFQVDGGQRNKITFILWAPDSAPIKSKMMYTSTKDSIKKKLV 108

>d1q8ga_ d.109.1.2 (A:) Cofilin (actin depolymerizing factor, ADF) {Human (Homo sapiens), non-muscle isoform [TaxId: 9606]} Length = 166

class: Alpha and beta proteins (a+b)
fold: Gelsolin-like
superfamily: Actin depolymerizing proteins
family: Cofilin-like
domain: Cofilin (actin depolymerizing factor, ADF)
species: Human (Homo sapiens), non-muscle isoform [TaxId: 9606]

 Score = 35.8 bits (82), Expect = 6e-04
 Identities = 14/121 (11%), Positives = 35/121 (28%), Gaps = 22/121 (18%)

Query: 37  SKSIKSAYEDVRSDASQT--------QWAVFKYQD----------SKISCTARGQS---- 74
           S  +   + D++   S T        +  +F   +           +I     GQ+    
Sbjct: 8   SDGVIKVFNDMKVRKSSTPEEVKKRKKAVLFCLSEDKKNIILEEGKEILVGDVGQTVDDP 67

Query: 75  FDKFRAQFRPDERSFGYLRMMTGDEMSRRLKFLLITWVGCEVGVIQRAKVSIDKALVKSV 134
           +  F       +  +         + S++   + I W      +  +   +  K  +K  
Sbjct: 68  YATFVKMLPDKDCRYALYDATYETKESKKEDLVFIFWAPESAPLKSKMIYASSKDAIKKK 127

Query: 135 I 135
           +
Sbjct: 128 L 128

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	143
d1t3ya1	130	Coactosin-like protein Cotl1 (Clp) {Human (Homo sa	99.97
d1hqz1_	139	Cofilin-like domain of actin-binding protein abp1p	99.96
d1cnua_	134	Cofilin (actin depolymerizing factor, ADF) {Acanth	99.89
d1cfya_	133	Cofilin (actin depolymerizing factor, ADF) {Baker'	99.88
d1f7sa_	124	Cofilin (actin depolymerizing factor, ADF) {Plant	99.87
d1q8ga_	166	Cofilin (actin depolymerizing factor, ADF) {Human	99.76
d1ak7a_	174	Destrin {Human and pig (Homo sapiens) and (Sus scr	99.7
d1vkka_	137	Glia maturation factor gamma, GMF-gamma {Mouse (Mu	99.7
d1m4ja_	133	Adf-H domain of twinfilin isoform-1 {Mouse (Mus mu	99.61

>d1t3ya1 d.109.1.2 (A:2-131) Coactosin-like protein Cotl1 (Clp) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Gelsolin-like
superfamily: Actin depolymerizing proteins
family: Cofilin-like
domain: Coactosin-like protein Cotl1 (Clp)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=5.3e-32  Score=197.27  Aligned_cols=109  Identities=42%  Similarity=0.672  Sum_probs=102.3

Q ss_pred             ccccChHHHHHHHHHHHcCCCCccEEEEEeeCCeEEEeeecCCHHHHHhccCCCceEEEEEEeEeCCCCcceeeEEEEEe
Q psy17893         32 PTTLDSKSIKSAYEDVRSDASQTQWAVFKYQDSKISCTARGQSFDKFRAQFRPDERSFGYLRMMTGDEMSRRLKFLLITW  111 (143)
Q Consensus        32 ~~~~~~~~i~~A~~~Vr~d~~~~nWilf~y~~~~l~l~~~G~Gl~El~~~L~dd~v~Ygl~Rv~~~d~~s~r~KfVfI~W  111 (143)
                      ++.+++++|++||++||++.+.++|++|+|+++.+++..+|.|++||+++|++++++||++|+..+++++.++|||||.|
T Consensus         1 ~~~vd~e~~~~a~~~vr~~~~~~~w~if~~d~~~~v~~~~~~~~~e~~~~l~~~~~~y~~~r~~~~~~~~~~~K~vfI~w   80 (130)
T d1t3ya1           1 ATKIDKEACRAAYNLVRDDGSAVIWVTFKYDGSTIVPGEQGAEYQHFIQQCTDDVRLFAFVRFTTGDAMSKRSKFALITW   80 (130)
T ss_dssp             CCEECHHHHHHHHHHHHCTTSSCCEEEEEEETTEEEEEEEESSHHHHHHHCCTTCEEEEEEEEEECSGGGCEEEEEEEEE
T ss_pred             CcccCHHHHHHHHHHHHcCCCCcEEEEEEeCCCEEEEcCCCCCHHHHHHhCCCCceEEEEEEEEecCCCCccccEEEEEe
Confidence            36789999999999999999899999999999888776666699999999999999999999998888999999999999


Q ss_pred             ecCCcccccceeeeecHHHHHhhccCCcc
Q psy17893        112 VGCEVGVIQRAKVSIDKALVKSVITFKFK  140 (143)
Q Consensus       112 iGe~V~~~~Kar~s~hk~~Vk~~~~~yh~  140 (143)
                      ||+++|+++||++++|+++|++.|+|+|.
T Consensus        81 ~p~~~~~~~Km~~ss~~~~ik~~l~~~~~  109 (130)
T d1t3ya1          81 IGENVSGLQRAKTGTDKTLVKEVVQNFAK  109 (130)
T ss_dssp             ECTTSCHHHHHHHHHHHHHHTTTSCCCSE
T ss_pred             CCCcCCHhHeeehHHhHHHHHHhcCCceE
Confidence            99999999999999999999999999985

>d1hqz1_ d.109.1.2 (1:) Cofilin-like domain of actin-binding protein abp1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Gelsolin-like
superfamily: Actin depolymerizing proteins
family: Cofilin-like
domain: Cofilin-like domain of actin-binding protein abp1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.96  E-value=4.6e-29  Score=183.79  Aligned_cols=107  Identities=20%  Similarity=0.295  Sum_probs=96.5

Q ss_pred             ccccChHHHHHHHHHHH-cCCCCccEEEEEeeCC-eEEEeeecCCHHHHHhccCCCceEEEEEEeEeCCCCcceeeEEEE
Q psy17893         32 PTTLDSKSIKSAYEDVR-SDASQTQWAVFKYQDS-KISCTARGQSFDKFRAQFRPDERSFGYLRMMTGDEMSRRLKFLLI  109 (143)
Q Consensus        32 ~~~~~~~~i~~A~~~Vr-~d~~~~nWilf~y~~~-~l~l~~~G~Gl~El~~~L~dd~v~Ygl~Rv~~~d~~s~r~KfVfI  109 (143)
                      .+.-++++|++||++|+ +++++++|++|+|+++ +|++.++|.|++||+++|++++++||++|+.  ++++.++|||||
T Consensus         5 ~~~t~s~ei~~ay~~v~~~~~~~~~wvi~~~~~~~~i~v~~~g~~~~e~~~~l~~~~~~Y~~~r~~--~~~s~~~K~vfI   82 (139)
T d1hqz1_           5 DYTTHSREIDAEYLKIVRGSDPDTTWLIISPNAKKEYEPESTGSSFHDFLQLFDETKVQYGLARVS--PPGSDVEKIIII   82 (139)
T ss_dssp             CCSTTHHHHHHHHHHHHHTCCTTCCEEEEEECTTSCEEEEEEESCHHHHHTCCCTTSCEEEEEEEC--CTTCSCCEEEEE
T ss_pred             ecccCCHHHHHHHHHHHhCCCCCccEEEEEECCCcEEEEecCCCCHHHHHHhcCCCceEEEEEEEe--cCCCCcccEEEE
Confidence            35567999999999975 4555799999999985 7999999999999999999999999999997  567889999999


Q ss_pred             EeecCCcccccceeeeecHHHH-HhhccCCcc
Q psy17893        110 TWVGCEVGVIQRAKVSIDKALV-KSVITFKFK  140 (143)
Q Consensus       110 ~WiGe~V~~~~Kar~s~hk~~V-k~~~~~yh~  140 (143)
                      +||||++|+++||++++|++++ +++++++|.
T Consensus        83 ~W~pd~a~~~~Km~yas~~~~v~k~~l~~~~~  114 (139)
T d1hqz1_          83 GWCPDSAPLKTRASFAANFAAVANNLFKGYHV  114 (139)
T ss_dssp             EECCTTSCHHHHHHHHHHHHHHHHHTSCSCSE
T ss_pred             EEcCCCCCHhHhhheeccHHHHHHHhcCCceE
Confidence            9999999999999999999998 577899885

>d1cnua_ d.109.1.2 (A:) Cofilin (actin depolymerizing factor, ADF) {Acanthamoeba castellanii, actophorin [TaxId: 5755]}

class: Alpha and beta proteins (a+b)
fold: Gelsolin-like
superfamily: Actin depolymerizing proteins
family: Cofilin-like
domain: Cofilin (actin depolymerizing factor, ADF)
species: Acanthamoeba castellanii, actophorin [TaxId: 5755]

Probab=99.89  E-value=1.6e-23  Score=152.07  Aligned_cols=103  Identities=14%  Similarity=0.245  Sum_probs=93.2

Q ss_pred             hHHHHHHHHHHHcCCCCccEEEEEeeCC--eEEEeeecC---CHHHHHhccCCCceEEEEEEeEeCCCCcceeeEEEEEe
Q psy17893         37 SKSIKSAYEDVRSDASQTQWAVFKYQDS--KISCTARGQ---SFDKFRAQFRPDERSFGYLRMMTGDEMSRRLKFLLITW  111 (143)
Q Consensus        37 ~~~i~~A~~~Vr~d~~~~nWilf~y~~~--~l~l~~~G~---Gl~El~~~L~dd~v~Ygl~Rv~~~d~~s~r~KfVfI~W  111 (143)
                      +++|.+||++++..+ .++|++|+++++  .|++..+|.   +++||+++|++++++||++|+...++++.+.|+|||.|
T Consensus         5 ~~e~~~a~~~lk~~~-~~~~vi~~I~~~~~~i~v~~~~~~~~~~~e~~~~l~~~~~ry~~~~~~~~~~~~~~~k~vfI~w   83 (134)
T d1cnua_           5 SDDCVQKFNELKLGH-QHRYVTFKMNASNTEVVVEHVGGPNATYEDFKSQLPERDCRYAIFDYEFQVDGGQRNKITFILW   83 (134)
T ss_dssp             CHHHHHHHHHHHHHC-CCSEEEEEECTTSSEEEEEEECCTTCCHHHHHTTSCTTSCEEEEEEEEEEETTEEEEEEEEEEE
T ss_pred             CHHHHHHHHHHhcCC-CeEEEEEEEeCCCeEEEEEecCCCCCCHHHHHHhCCCCCceEEEEEeeecCCCCCceeEEEEEE
Confidence            679999999999765 589999999875  688777764   79999999999999999999996667788999999999


Q ss_pred             ecCCcccccceeeeecHHHHHhhccCCcc
Q psy17893        112 VGCEVGVIQRAKVSIDKALVKSVITFKFK  140 (143)
Q Consensus       112 iGe~V~~~~Kar~s~hk~~Vk~~~~~yh~  140 (143)
                      ||+++|+..||.|++|++++++.|+++|.
T Consensus        84 ~P~~a~~k~Km~yassk~~l~~~l~gi~~  112 (134)
T d1cnua_          84 APDSAPIKSKMMYTSTKDSIKKKLVGIQV  112 (134)
T ss_dssp             CCTTSCHHHHHHHHHHHHHHHHHSTTCCE
T ss_pred             CCCCCChhheEEeeccHHHHhhhccCceE
Confidence            99999999999999999999999998764

>d1cfya_ d.109.1.2 (A:) Cofilin (actin depolymerizing factor, ADF) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Gelsolin-like
superfamily: Actin depolymerizing proteins
family: Cofilin-like
domain: Cofilin (actin depolymerizing factor, ADF)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.88  E-value=9.1e-23  Score=147.42  Aligned_cols=103  Identities=14%  Similarity=0.267  Sum_probs=90.5

Q ss_pred             hHHHHHHHHHHHcCCCCccEEEEEeeCC--eEEEeeecC--CHHHHHhccCCCceEEEEEEeEe--CCCCcceeeEEEEE
Q psy17893         37 SKSIKSAYEDVRSDASQTQWAVFKYQDS--KISCTARGQ--SFDKFRAQFRPDERSFGYLRMMT--GDEMSRRLKFLLIT  110 (143)
Q Consensus        37 ~~~i~~A~~~Vr~d~~~~nWilf~y~~~--~l~l~~~G~--Gl~El~~~L~dd~v~Ygl~Rv~~--~d~~s~r~KfVfI~  110 (143)
                      +++|.+||++++.++ .++|++|.++++  .+++..+|.  +++||+++|++++++||++|+..  +++++.++|+|||.
T Consensus         4 s~e~~~a~~~lk~~k-~~~~vi~~i~~~~~~vv~~~~~~~~~~~~~~~~l~~~~pry~v~~~~~~~~~~~~~~~k~vfI~   82 (133)
T d1cfya_           4 ADESLTAFNDLKLGK-KYKFILFGLNDAKTEIVVKETSTDPSYDAFLEKLPENDCLYAIYDFEYEINGNEGKRSKIVFFT   82 (133)
T ss_dssp             CHHHHHHHHHHHHHC-CCSEEEEEECTTSSEEEEEEEECCCCHHHHHTTSCTTCCEEEEEEEEEECSSSCCEEEEEEEEE
T ss_pred             CHHHHHHHHHHHcCC-CeEEEEEEEcCCceEEEEecCCCCCCHHHHHHhCCccCceEEEEEeeeecccCCCCcccEEEEE
Confidence            579999999999876 589999999875  455554444  79999999999999999999983  55677899999999


Q ss_pred             eecCCcccccceeeeecHHHHHhhccCCcc
Q psy17893        111 WVGCEVGVIQRAKVSIDKALVKSVITFKFK  140 (143)
Q Consensus       111 WiGe~V~~~~Kar~s~hk~~Vk~~~~~yh~  140 (143)
                      |||+++|+..||.|++|++++++.|++.|.
T Consensus        83 w~Pd~a~vk~Km~yassk~~l~~~l~gi~~  112 (133)
T d1cfya_          83 WSPDTAPVRSKMVYASSKDALRRALNGVST  112 (133)
T ss_dssp             ECCTTSCHHHHHHHHHHHHHHHHHCTTCCE
T ss_pred             ECCCCCCHHHheehHhhHHHHHHhccCceE
Confidence            999999999999999999999999998764

>d1f7sa_ d.109.1.2 (A:) Cofilin (actin depolymerizing factor, ADF) {Plant (Arabidopsis thaliana), ADF1 [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Gelsolin-like
superfamily: Actin depolymerizing proteins
family: Cofilin-like
domain: Cofilin (actin depolymerizing factor, ADF)
species: Plant (Arabidopsis thaliana), ADF1 [TaxId: 3702]

Probab=99.87  E-value=3e-22  Score=143.57  Aligned_cols=104  Identities=15%  Similarity=0.254  Sum_probs=94.2

Q ss_pred             ChHHHHHHHHHHHcCCCCccEEEEEeeCC--eEEEeeecC---CHHHHHhccCCCceEEEEEEeE-eCCCCcceeeEEEE
Q psy17893         36 DSKSIKSAYEDVRSDASQTQWAVFKYQDS--KISCTARGQ---SFDKFRAQFRPDERSFGYLRMM-TGDEMSRRLKFLLI  109 (143)
Q Consensus        36 ~~~~i~~A~~~Vr~d~~~~nWilf~y~~~--~l~l~~~G~---Gl~El~~~L~dd~v~Ygl~Rv~-~~d~~s~r~KfVfI  109 (143)
                      -+++|.+||++++..+ ..+|++|+++++  .|++..+|.   +++||+++|++++++|+++++. ..++++.+.|+|||
T Consensus         6 v~de~~~~f~~lk~~~-~~~~vi~~i~~~~~~i~v~~~~~~~~~~~~~~~~l~~~~~ry~~~~~~~~~~~~~~~~k~vfI   84 (124)
T d1f7sa_           6 VHDDCKLRFLELKAKR-THRFIVYKIEEKQKQVVVEKVGQPIQTYEEFAACLPADECRYAIYDFDFVTAENCQKSKIFFI   84 (124)
T ss_dssp             ECHHHHHHHHHHHHHC-CCSEEEEEEETTTTEEEEEEECCSSCCHHHHHTTSCTTSCEEEEEEEEEECTTSCEEEEEEEE
T ss_pred             eCHHHHHHHHHHhcCC-CceEEEEEEeCCCcEEEEEecCCCCCCHHHHHHhCCcCCceEEEEEEEEecCCCCccccEEEE
Confidence            3688999999999865 589999999874  699988886   7999999999999999999998 45667889999999


Q ss_pred             EeecCCcccccceeeeecHHHHHhhccCCcc
Q psy17893        110 TWVGCEVGVIQRAKVSIDKALVKSVITFKFK  140 (143)
Q Consensus       110 ~WiGe~V~~~~Kar~s~hk~~Vk~~~~~yh~  140 (143)
                      .|||+++|+..||.|+++++.+++.|++.|+
T Consensus        85 ~w~Pd~a~vk~KMlyAssk~~l~~~l~gi~~  115 (124)
T d1f7sa_          85 AWCPDIAKVRSKMIYASSKDRFKRELDGIQV  115 (124)
T ss_dssp             EECCTTSCHHHHHHHHHHHHHHHTTCTTCCE
T ss_pred             EECCCCCCHhHeeeeHhHHHHHHHHhcCccE
Confidence            9999999999999999999999999998764

>d1q8ga_ d.109.1.2 (A:) Cofilin (actin depolymerizing factor, ADF) {Human (Homo sapiens), non-muscle isoform [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Gelsolin-like
superfamily: Actin depolymerizing proteins
family: Cofilin-like
domain: Cofilin (actin depolymerizing factor, ADF)
species: Human (Homo sapiens), non-muscle isoform [TaxId: 9606]

Probab=99.76  E-value=2.8e-19  Score=133.93  Aligned_cols=107  Identities=10%  Similarity=0.173  Sum_probs=89.8

Q ss_pred             ccChHHHHHHHHHHHcCC--------CCccEEEEEeeCC--eEEEeeec-----------C-CHHHHHhccCCCceEEEE
Q psy17893         34 TLDSKSIKSAYEDVRSDA--------SQTQWAVFKYQDS--KISCTARG-----------Q-SFDKFRAQFRPDERSFGY   91 (143)
Q Consensus        34 ~~~~~~i~~A~~~Vr~d~--------~~~nWilf~y~~~--~l~l~~~G-----------~-Gl~El~~~L~dd~v~Ygl   91 (143)
                      .--+++|.++|++++..+        ..++|++|.++++  .|++....           . .++||++.|++++++|++
T Consensus         5 i~vs~e~~~~f~~lK~~~~~~~~~~~~~~~~vi~kI~~~~~~Ivv~~~~e~~~~~~~~~~~~~~~e~~~~l~~~~prY~v   84 (166)
T d1q8ga_           5 VAVSDGVIKVFNDMKVRKSSTPEEVKKRKKAVLFCLSEDKKNIILEEGKEILVGDVGQTVDDPYATFVKMLPDKDCRYAL   84 (166)
T ss_dssp             CCCCSHHHHHHHHHHHCCCCSHHHHTSCEEEEEEEECSSSSCEEEEEEEEEESGGGTTTCSCHHHHHHHTCCTTSCBCCC
T ss_pred             cCcCHHHHHHHHHHHhccccchhhhccccceEEEEEcCCCcEEEEecccccccccccccccchHHHHHHhCCCCCcEEEE
Confidence            335889999999998643        3579999999875  46655332           2 489999999999999999


Q ss_pred             EEeEeCCCCcceeeEEEEEeecCCcccccceeeeecHHHHHhhccCCcc
Q psy17893         92 LRMMTGDEMSRRLKFLLITWVGCEVGVIQRAKVSIDKALVKSVITFKFK  140 (143)
Q Consensus        92 ~Rv~~~d~~s~r~KfVfI~WiGe~V~~~~Kar~s~hk~~Vk~~~~~yh~  140 (143)
                      ||+.....++++.|+|||.|||+++++..||.|++++.++++.|+++|+
T Consensus        85 ~d~~~~~~~~~~~klvfi~w~Pd~a~ik~KMlYassk~~l~~~l~g~~~  133 (166)
T d1q8ga_          85 YDATYETKESKKEDLVFIFWAPESAPLKSKMIYASSKDAIKKKLTGIKH  133 (166)
T ss_dssp             EECCEEBSSCEECCEEEEEECCTTSCGGGTHHHHHHHHHHHHHHTSCSE
T ss_pred             EEeecccCCCCcccEEEEEEcCCCCChhheeeeHhhHHHHHHHhcCccE
Confidence            9998544456789999999999999999999999999999999998764

>d1ak7a_ d.109.1.2 (A:) Destrin {Human and pig (Homo sapiens) and (Sus scrofa) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Gelsolin-like
superfamily: Actin depolymerizing proteins
family: Cofilin-like
domain: Destrin
species: Human and pig (Homo sapiens) and (Sus scrofa) [TaxId: 9606]

Probab=99.70  E-value=4.5e-19  Score=134.20  Aligned_cols=111  Identities=9%  Similarity=0.120  Sum_probs=93.2

Q ss_pred             ccccccChHHHHHHHHHHHcCCC--------CccEEEEEeeCC--eEEEeeec-----------C-CHHHHHhccCCCce
Q psy17893         30 VCPTTLDSKSIKSAYEDVRSDAS--------QTQWAVFKYQDS--KISCTARG-----------Q-SFDKFRAQFRPDER   87 (143)
Q Consensus        30 ~m~~~~~~~~i~~A~~~Vr~d~~--------~~nWilf~y~~~--~l~l~~~G-----------~-Gl~El~~~L~dd~v   87 (143)
                      +++..--+++|.++|++++...+        ..+|++|+++++  .|++...+           . .+++|+++|+++++
T Consensus        10 s~SGI~v~de~~~~f~elK~~~~~~~~~~kk~~r~ii~kI~~~~~~Iv~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~~p   89 (174)
T d1ak7a_          10 SASGVQVADEVCRIFYDMKVRKCSTPEEIKKRKKAVIFCLSADKKCIIVEEGKEILVGDVGVTITDPFKHFVGMLPEKDC   89 (174)
T ss_dssp             TTCCCCCCSSHHHHTTSSSSTTCSSHHHHTTSCCEEEECCCSSSCSSCCCSSCCCCSSSTTTTCCSSSHHHHHHSCSSSC
T ss_pred             CCCCcEeCHHHHHHHHHHhhccccchhhhccceeEEEEEEcCCCeEEEEeccccccccccccccchhHHHHHHhCCCCCc
Confidence            45655568999999999987543        467999999875  56664332           2 58999999999999


Q ss_pred             EEEEEEeEeCCCCcceeeEEEEEeecCCcccccceeeeecHHHHHhhccCCcc
Q psy17893         88 SFGYLRMMTGDEMSRRLKFLLITWVGCEVGVIQRAKVSIDKALVKSVITFKFK  140 (143)
Q Consensus        88 ~Ygl~Rv~~~d~~s~r~KfVfI~WiGe~V~~~~Kar~s~hk~~Vk~~~~~yh~  140 (143)
                      +|++||+....+++.+.|+|||.|||+++|+..||.|++++.++++.|+++|.
T Consensus        90 rY~vyd~~~~~~~~~~~k~vfI~w~Pd~a~vk~KMlYassk~~lk~~l~g~~~  142 (174)
T d1ak7a_          90 RYALYDASFETKESRKEELMFFLWAPELAPLKSKMIYASSKDAIKKKFQGIKH  142 (174)
T ss_dssp             CEEEECCCCCBSSCSCCCCCCEEECCSSSCGGGTTTHHHHHHHHHHHCSCCSC
T ss_pred             eEEEEEeeccCCCCCcccEEEEEeCCCCCChhHhhhhHhhHHHHHHHhcCeeE
Confidence            99999998555566789999999999999999999999999999999998864

>d1vkka_ d.109.1.2 (A:) Glia maturation factor gamma, GMF-gamma {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Gelsolin-like
superfamily: Actin depolymerizing proteins
family: Cofilin-like
domain: Glia maturation factor gamma, GMF-gamma
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.70  E-value=2.6e-17  Score=120.19  Aligned_cols=105  Identities=10%  Similarity=0.054  Sum_probs=90.8

Q ss_pred             hHHHHHHHHHHHcCC-CCccEEEEEeeCC--eEEEeeecC--CHHHHHhccCCCceEEEEEEeE-eCCCCcceeeEEEEE
Q psy17893         37 SKSIKSAYEDVRSDA-SQTQWAVFKYQDS--KISCTARGQ--SFDKFRAQFRPDERSFGYLRMM-TGDEMSRRLKFLLIT  110 (143)
Q Consensus        37 ~~~i~~A~~~Vr~d~-~~~nWilf~y~~~--~l~l~~~G~--Gl~El~~~L~dd~v~Ygl~Rv~-~~d~~s~r~KfVfI~  110 (143)
                      ++++.+|++++|..+ ...+|++++.+.+  .+++..+..  .+++|.+.|++++++|+++++. ...++..+.|++||.
T Consensus         6 ~~e~~~~l~~~k~~~~~~~~~ii~~Id~~~~~iv~~~~~~~~~~~~~~~~lp~~~prY~vy~~~~~~~~g~~~~k~vfi~   85 (137)
T d1vkka_           6 DPELKETLRKFRFRKETNNAAIIMKVDKDRQMVVLEDELQNISPEELKLELPERQPRFVVYSYKYVHDDGRVSYPLCFIF   85 (137)
T ss_dssp             CHHHHHHHHHHHTCCCCSCEEEEEEEETTTTEEEEEEEEESCCHHHHHHHSCSSSCEEEEEECCEECTTSCEECCEEEEE
T ss_pred             CHHHHHHHHHHHhccCCCCCEEEEEECCCceEEEEEecCCCCCHHHHHhhCCCCCcEEEEEEcccccCCCCccccEEEEE
Confidence            789999999997543 3579999999775  566655544  7999999999999999999998 455577899999999


Q ss_pred             eecCCcccccceeeeecHHHHHhhccCCccc
Q psy17893        111 WVGCEVGVIQRAKVSIDKALVKSVITFKFKF  141 (143)
Q Consensus       111 WiGe~V~~~~Kar~s~hk~~Vk~~~~~yh~~  141 (143)
                      |||+++++..||.||+.++.+++.++..+.+
T Consensus        86 w~Pd~a~ik~kMlYassk~~l~~~l~~~k~i  116 (137)
T d1vkka_          86 SSPVGCKPEQQMMYAGSKNRLVQTAELTKVF  116 (137)
T ss_dssp             ECCTTSCHHHHHHHHHHHHHHHHHTTCCCEE
T ss_pred             ECCCCCChHHhhhhHHHHHHHHHHhCCeEEE
Confidence            9999999999999999999999999877654

>d1m4ja_ d.109.1.2 (A:) Adf-H domain of twinfilin isoform-1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Gelsolin-like
superfamily: Actin depolymerizing proteins
family: Cofilin-like
domain: Adf-H domain of twinfilin isoform-1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.61  E-value=9e-16  Score=111.01  Aligned_cols=97  Identities=14%  Similarity=0.308  Sum_probs=79.1

Q ss_pred             hHHHHHHHHHHHcCCCCccEEEEEee--CCeEEEeeecC---C----HHHHH-hccCCCceEEEEEEeEeCCCCcceeeE
Q psy17893         37 SKSIKSAYEDVRSDASQTQWAVFKYQ--DSKISCTARGQ---S----FDKFR-AQFRPDERSFGYLRMMTGDEMSRRLKF  106 (143)
Q Consensus        37 ~~~i~~A~~~Vr~d~~~~nWilf~y~--~~~l~l~~~G~---G----l~El~-~~L~dd~v~Ygl~Rv~~~d~~s~r~Kf  106 (143)
                      .+++.++++.+++.    +|+++.++  +.+|++..+++   .    +++++ +.|++++++|+++|+..  +++.+.|+
T Consensus         4 s~e~~~~f~~~k~~----~~~~~~i~~~~~~ivv~~~~~~~~~~~~~~~~~l~~~l~~~~prY~~~~~~~--~~~~~~k~   77 (133)
T d1m4ja_           4 SEDVKEIFARARNG----KYRLLKISIENEQLVVGSCSPPSDSWEQDYDSFVLPLLEDKQPCYVLFRLDS--QNAQGYEW   77 (133)
T ss_dssp             CHHHHHHHHHHHTT----TCSEEEEEECSSSEEEEEEECCCSCHHHHHHHHHGGGCCTTCCEEEEEEEEE--EETTEEEE
T ss_pred             CHHHHHHHHhccCC----CEEEEEEEeCCcEEEEEEecCCCccchhhHHHHHhhcCCCCCcEEEEEEecC--CCCCcceE
Confidence            67899999999753    56666665  44799988776   2    44544 55788999999999983  23457899


Q ss_pred             EEEEeecCCcccccceeeeecHHHHHhhccCCc
Q psy17893        107 LLITWVGCEVGVIQRAKVSIDKALVKSVITFKF  139 (143)
Q Consensus       107 VfI~WiGe~V~~~~Kar~s~hk~~Vk~~~~~yh  139 (143)
                      +||.|||+++|+..||.||++++++++.|++.|
T Consensus        78 vfI~w~Pd~a~vk~KMlyASsk~~l~~~l~g~~  110 (133)
T d1m4ja_          78 IFIAWSPDHSHVRQKMLYAATRATLKKEFGGGH  110 (133)
T ss_dssp             EEEEECCTTSCHHHHHHHHHHHHHHHHHHCGGG
T ss_pred             EEEEECCCCCCHHHHHHHHHHHHHHHHHcCCce
Confidence            999999999999999999999999999999854