Psyllid ID: psy1999

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------
Protein Sequence
MTYLILKILLICLVAHNPTDSLSTSQLNSKKLLNKEKCTKIYPKKFVGYVPFGNRAAGNFTKVVPEEGLPMTVEQCVQTCCNDESCNIVFMYRAEGKINCFLVTKVPDYPPEANAGSDVILYLPNSNVTLNGNMSTDDHGLVSYEWTLRESLNQHKPVDMQKSKTPYLQLSNLELGE
Secondary Structure (PSIPRED)
ccHHHHHHHHHHHHHccccccccccccccHHccccccccccccccEEcccccccccccccEEEcccccccccccccccEEcccccccEEEEEEccccEEEEEEcccccccccccccccEEEEccccEEEEEcccccccccEEEEEEEEcccccccccEEEccccccEEEEccccccc
Secondary Structure Prediction (SSPRO)
cHHHHHHHHHHHHHHccccccccccccccHHHHHccccHHHcccccccccccccccccccccccccccccccHHHHHHHHccccccEEEEEEcccccEEEEEEcccccccccEcccccEEEEEcccEEEEEcccccccccEEEEEEEEccccccccEEEcccccccEEEEEcccccc
Coil and Loop (DISEMBL)
MTYLILKILLICLVahnptdslstsqLNSKKllnkekctkiypkkfvgyvpfgnraagnftkvvpeeglpmtVEQCVQTccndescnIVFMYRAEGkincflvtkvpdyppeanagsdvilylpnsnvtlngnmstddhglVSYEWTLRESlnqhkpvdmqksktpylqlsnlelge
Flexible Loop (DISEMBL)
MTYLILKILLICLVAHnptdslstsqlnskkllnkekctkiypkKFVGYVPFGNRAAGNFTKVVPEEGLPMTVEQCVQTCCNDESCNIVFMYRAEGKINCFLVTKVPDYPPEANAGSDVILYLPNSNVTLNGNMSTDDHGLVSYEWTLRESLNqhkpvdmqksktpylqlsnlelge
Low Complexity Region (SEG)
MTYLILKILLICLVAHNPTDSLSTSQLNSKKLLNKEKCTKIYPKKFVGYVPFGNRAAGNFTKVVPEEGLPMTVEQCVQTCCNDESCNIVFMYRAEGKINCFLVTKVPDYPPEANAGSDVILYLPNSNVTLNGNMSTDDHGLVSYEWTLRESLNQHKPVDMQKSKTPYLQLSNLELGE
Disordered region (IsUnstruct)
**YLILKILLICLVAHNP*************LLNKEKCTKIYPKKFVGYVPFGNRAAGNFTKVVPEEGLPMTVEQCVQTCCNDESCNIVFMYRAEGKINCFLVTKVPDYPPEANAGSDVILYLPNSNVTLNGNMSTDDHGLVSYEWTLR****************************
Disordered Region (DISOPRED)
*TYLILKILLICLVAHNPTDSLSTSQLNSKKLLNKEKCTKIYPKKFVGYVPFGNRAAGNFTKVVPEEGLPMTVEQCVQTCCNDESCNIVFMYRAEGKINCFLVTKVPDYPPEANAGSDVILYLPNSNVTLNGNMSTDDHGLVSYEWT****************KTPYLQLSNL****
Disordered Region (DISEMBL)
MTYLILKILLICLVAHNPTDSLSTSQLNSKKLLNKEKCTKIYPKKFVGYVPFGNRAAGNFTKVVPEEGLPMTVEQCVQTCCNDESCNIVFMYRAEGKINCFLVTKVPDYPPEANAGSDVILYLPNSNVTLNGNMSTDDHGLVSYEWTLRESLNQHKPVDMQKSKTPYLQLSNLELGE
Disordered Region (DISPRO)
MTYLILKILLICLVAHNPTDSLSTSQLNSKKLLNKEKCTKIYPKKFVGYVPFGNRAAGNFTKVVPEEGLPMTVEQCVQTCCNDESCNIVFMYRAEGKINCFLVTKVPDYPPEANAGSDVILYLPNSNVTLNGNMSTDDHGLVSYEWTLRESLNQHKPVDMQKSKTPYLQLSNL****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MTYLILKILLICLVAHNPTDSLSTSQLNSKKLLNKEKCTKIYPKKFVGYVPFGNRAAGNFTKVVPEEGLPMTVEQCVQTCCNDESCNIVFMYRAEGKINCFLVTKVPDYPPEANAGSDVILYLPNSNVTLNGNMSTDDHGLVSYEWTLRESLNQHKPVDMQKSKTPYLQLSNLELGE
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	177	2.2.26 [Sep-21-2011]
Q5RFR6	1049	Dyslexia-associated prote	yes	N/A	0.418	0.070	0.52	7e-15
Q8IZA0	1049	Dyslexia-associated prote	yes	N/A	0.418	0.070	0.52	7e-15
Q8K135	1048	Dyslexia-associated prote	yes	N/A	0.418	0.070	0.52	7e-15
Q5VV43	1072	Dyslexia-associated prote	no	N/A	0.435	0.071	0.461	1e-12
P0CI71	1081	Dyslexia-associated prote	no	N/A	0.389	0.063	0.485	3e-12
Q5SZV5	1081	Dyslexia-associated prote	no	N/A	0.389	0.063	0.485	7e-12
Q86VZ4	500	Low-density lipoprotein r	no	N/A	0.564	0.2	0.290	1e-10
Q8CB67	483	Low-density lipoprotein r	no	N/A	0.570	0.209	0.289	4e-10

>sp|Q5RFR6|K319L_PONAB Dyslexia-associated protein KIAA0319-like protein OS=Pongo abelii GN=KIAA0319L PE=2 SV=1

 Score = 80.1 bits (196), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 39/75 (52%), Positives = 54/75 (72%), Gaps = 1/75 (1%)

Query: 103 VTKVPDYPPEANAGSDVILYLPNSNVTLNGNMSTDDHGLVSYEWTLRESLNQHKPVDMQK 162
           V K  DYPP ANAG + ++ LP +++TL GN STDDHG+ SYEW+L  S ++ K V+MQ 
Sbjct: 495 VNKAVDYPPVANAGPNQVITLPQNSITLFGNQSTDDHGITSYEWSLSPS-SKGKVVEMQG 553

Query: 163 SKTPYLQLSNLELGE 177
            +TP LQLS ++ G+
Sbjct: 554 VRTPTLQLSAMQEGD 568

Possible role in axon guidance through interaction with RTN4R.
Pongo abelii (taxid: 9601)

>sp|Q8IZA0|K319L_HUMAN Dyslexia-associated protein KIAA0319-like protein OS=Homo sapiens GN=KIAA0319L PE=1 SV=2

 Score = 80.1 bits (196), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 39/75 (52%), Positives = 54/75 (72%), Gaps = 1/75 (1%)

Query: 103 VTKVPDYPPEANAGSDVILYLPNSNVTLNGNMSTDDHGLVSYEWTLRESLNQHKPVDMQK 162
           V K  DYPP ANAG + ++ LP +++TL GN STDDHG+ SYEW+L  S ++ K V+MQ 
Sbjct: 495 VNKAVDYPPVANAGPNQVITLPQNSITLFGNQSTDDHGITSYEWSLSPS-SKGKVVEMQG 553

Query: 163 SKTPYLQLSNLELGE 177
            +TP LQLS ++ G+
Sbjct: 554 VRTPTLQLSAMQEGD 568

Possible role in axon guidance through interaction with RTN4R.

Homo sapiens (taxid: 9606)

>sp|Q8K135|K319L_MOUSE Dyslexia-associated protein KIAA0319-like protein OS=Mus musculus GN=Kiaa0319l PE=1 SV=1

 Score = 80.1 bits (196), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 39/75 (52%), Positives = 54/75 (72%), Gaps = 1/75 (1%)

Query: 103 VTKVPDYPPEANAGSDVILYLPNSNVTLNGNMSTDDHGLVSYEWTLRESLNQHKPVDMQK 162
           V K  DYPP ANAG + ++ LP +++TL GN STDDHG+ SYEW+L  S ++ K V+MQ 
Sbjct: 494 VNKAVDYPPVANAGPNQVITLPQNSITLFGNQSTDDHGITSYEWSLSPS-SKGKVVEMQG 552

Query: 163 SKTPYLQLSNLELGE 177
            +TP LQLS ++ G+
Sbjct: 553 VRTPALQLSAMQEGD 567

Possible role in axon guidance through interaction with RTN4R.

Mus musculus (taxid: 10090)

>sp|Q5VV43|K0319_HUMAN Dyslexia-associated protein KIAA0319 OS=Homo sapiens GN=KIAA0319 PE=1 SV=1

 Score = 72.4 bits (176), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 36/78 (46%), Positives = 51/78 (65%), Gaps = 1/78 (1%)

Query: 100 CFLVTKVPDYPPEANAGSDVILYLPNSNVTLNGNMSTDDHGLVSYEWTLRESLNQHKPVD 159
             +V    DYPP ANAG +  + LP +++TLNGN S+DDH +V YEW+L    ++ K V 
Sbjct: 518 ALIVNNAVDYPPVANAGPNHTITLPQNSITLNGNQSSDDHQIVLYEWSLGPG-SEGKHVV 576

Query: 160 MQKSKTPYLQLSNLELGE 177
           MQ  +TPYL LS ++ G+
Sbjct: 577 MQGVQTPYLHLSAMQEGD 594

Involved in neuronal migration during development of the cerebral neocortex. May function in a cell autonomous and a non-cell autonomous manner and play a role in appropriate adhesion between migrating neurons and radial glial fibers. May also regulate growth and differentiation of dendrites.

Homo sapiens (taxid: 9606)

>sp|P0CI71|K0319_RAT Dyslexia-associated protein KIAA0319 homolog OS=Rattus norvegicus PE=2 SV=1

 Score = 71.2 bits (173), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 34/70 (48%), Positives = 46/70 (65%), Gaps = 1/70 (1%)

Query: 108 DYPPEANAGSDVILYLPNSNVTLNGNMSTDDHGLVSYEWTLRESLNQHKPVDMQKSKTPY 167
           DYPP ANAG +  + LP + + LNGN S+DDH +V YEW   +   + K + MQ ++TPY
Sbjct: 535 DYPPVANAGPNQTITLPQNTIILNGNQSSDDHQIVLYEW-FPDPGGESKEMVMQGAQTPY 593

Query: 168 LQLSNLELGE 177
           L LS L+ GE
Sbjct: 594 LHLSELQEGE 603

Involved in neuronal migration during development of the cerebral neocortex. May function in a cell autonomous and a non-cell autonomous manner and play a role in appropriate adhesion between migrating neurons and radial glial fibers. May also regulate growth and differentiation of dendrites.

Rattus norvegicus (taxid: 10116)

>sp|Q5SZV5|K0319_MOUSE Dyslexia-associated protein KIAA0319 homolog OS=Mus musculus GN=Kiaa0319 PE=2 SV=1

 Score = 70.1 bits (170), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 34/70 (48%), Positives = 45/70 (64%), Gaps = 1/70 (1%)

Query: 108 DYPPEANAGSDVILYLPNSNVTLNGNMSTDDHGLVSYEWTLRESLNQHKPVDMQKSKTPY 167
           DYPP ANAG +  + LP + + LNGN S+DDH +V YEW       + K + MQ ++TPY
Sbjct: 535 DYPPVANAGPNQTITLPQNTIILNGNQSSDDHQIVLYEWFAGPG-GESKEMVMQGAQTPY 593

Query: 168 LQLSNLELGE 177
           L LS L+ GE
Sbjct: 594 LHLSELQEGE 603

Involved in neuronal migration during development of the cerebral neocortex. May function in a cell autonomous and a non-cell autonomous manner and play a role in appropriate adhesion between migrating neurons and radial glial fibers. May also regulate growth and differentiation of dendrites.

Mus musculus (taxid: 10090)

>sp|Q86VZ4|LRP11_HUMAN Low-density lipoprotein receptor-related protein 11 OS=Homo sapiens GN=LRP11 PE=2 SV=2

 Score = 65.9 bits (159), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 43/148 (29%), Positives = 64/148 (43%), Gaps = 48/148 (32%)

Query: 74  EQCVQTCCNDESCNI-------------------VFMYRAEGKINC----------FLVT 104
            QCV  CC++  C++                   +F   A G+  C          + ++
Sbjct: 128 RQCVAACCSEPRCSVAVVELPRRPAPPAAVLGCYLFNCTARGRNVCKFALHSGYSSYSLS 187

Query: 105 KVPD----------------YPPEANAGSDVILYLPNSNVTLNGNMSTDDHGLVSYEWTL 148
           + PD                 PP + AG DV+L+LP   V L+G  STDDH +V YEW L
Sbjct: 188 RAPDGAALATARASPRQEKDAPPLSKAGQDVVLHLPTDGVVLDGRESTDDHAIVQYEWAL 247

Query: 149 RESLNQHKPVDMQKSKTPYLQLSNLELG 176
              L     VDM+  ++  L+LS+L+ G
Sbjct: 248 ---LQGDPSVDMKVPQSGTLKLSHLQEG 272

Homo sapiens (taxid: 9606)

>sp|Q8CB67|LRP11_MOUSE Low-density lipoprotein receptor-related protein 11 OS=Mus musculus GN=Lrp11 PE=2 SV=1

 Score = 64.3 bits (155), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 42/145 (28%), Positives = 61/145 (42%), Gaps = 44/145 (30%)

Query: 74  EQCVQTCCNDESCNIVFMYRAEG--------KINCFL----------------------- 102
            QCV  CC++ SC++  +    G           C+L                       
Sbjct: 114 RQCVTACCSEPSCSVAVVQLPRGPSVPAPMPAPRCYLFNCTARGRSVCKFAPLRGYRTYT 173

Query: 103 ------VTKVP-----DYPPEANAGSDVILYLPNSNVTLNGNMSTDDHGLVSYEWTLRES 151
                    +P     D PP + AG DV+L+LP   V L+G  S+DDH +V YEWTL++ 
Sbjct: 174 LSRAEDAAGIPPRPDEDKPPVSKAGKDVVLHLPTDGVVLDGRESSDDHAIVLYEWTLQQ- 232

Query: 152 LNQHKPVDMQKSKTPYLQLSNLELG 176
                 VDM+  +   L+LS L+ G
Sbjct: 233 -GDPSSVDMKVPQPGTLRLSRLKEG 256

Mus musculus (taxid: 10090)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	177
242018382	973	conserved hypothetical protein [Pediculu	0.412	0.075	0.689	7e-21
383864486	955	PREDICTED: dyslexia-associated protein K	0.412	0.076	0.662	1e-20
328704722	958	PREDICTED: dyslexia-associated protein K	0.412	0.076	0.635	1e-20
350398890	955	PREDICTED: dyslexia-associated protein K	0.412	0.076	0.662	1e-20
157132241	995	serine-type protease inhibitor [Aedes ae	0.412	0.073	0.662	1e-20
340712150	945	PREDICTED: dyslexia-associated protein K	0.412	0.077	0.648	2e-20
380030389	941	PREDICTED: dyslexia-associated protein K	0.412	0.077	0.648	2e-20
328783991	941	PREDICTED: dyslexia-associated protein K	0.412	0.077	0.648	2e-20
170028331	1032	serine-type protease inhibitor [Culex qu	0.412	0.070	0.662	4e-20
307193412	949	Uncharacterized protein KIAA0319 [Harpeg	0.610	0.113	0.453	4e-20

>gi|242018382|ref|XP_002429656.1| conserved hypothetical protein [Pediculus humanus corporis] gi|212514641|gb|EEB16918.1| conserved hypothetical protein [Pediculus humanus corporis]

 Score =  105 bits (262), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 51/74 (68%), Positives = 60/74 (81%), Gaps = 1/74 (1%)

Query: 103 VTKVPDYPPEANAGSDVILYLPNSNVTLNGNMSTDDHGLVSYEWTLRESLNQHKPVDMQK 162
           V K  DYPPEANAG+DVI+YLP ++VTLNGNMSTDD G+VS+EWT R    + K VDMQ 
Sbjct: 439 VVKGTDYPPEANAGNDVIVYLPVNSVTLNGNMSTDDRGIVSWEWT-RTHTGRDKAVDMQN 497

Query: 163 SKTPYLQLSNLELG 176
           ++TPYLQLSNLE G
Sbjct: 498 TRTPYLQLSNLEEG 511

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383864486|ref|XP_003707709.1| PREDICTED: dyslexia-associated protein KIAA0319-like [Megachile rotundata]

 Score =  105 bits (261), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 49/74 (66%), Positives = 60/74 (81%), Gaps = 1/74 (1%)

Query: 103 VTKVPDYPPEANAGSDVILYLPNSNVTLNGNMSTDDHGLVSYEWTLRESLNQHKPVDMQK 162
           V KV DYPP ANAG D+I+YLP + +TLNGN+STDDHG+ S+EWT   S +Q+K VDMQ 
Sbjct: 414 VLKVIDYPPSANAGQDIIIYLPQNTLTLNGNLSTDDHGIASWEWTKSPS-DQNKAVDMQN 472

Query: 163 SKTPYLQLSNLELG 176
           ++TPYLQLSNLE G
Sbjct: 473 TRTPYLQLSNLEEG 486

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328704722|ref|XP_001946382.2| PREDICTED: dyslexia-associated protein KIAA0319-like protein-like [Acyrthosiphon pisum]

 Score =  104 bits (260), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 47/74 (63%), Positives = 63/74 (85%), Gaps = 1/74 (1%)

Query: 103 VTKVPDYPPEANAGSDVILYLPNSNVTLNGNMSTDDHGLVSYEWTLRESLNQHKPVDMQK 162
           V +VPDYPPEANAG D+++YLP  NVTLNG++STDDHG+V++EWT + S +Q+K VD+Q 
Sbjct: 423 VMRVPDYPPEANAGQDMVVYLPVKNVTLNGSLSTDDHGIVAWEWT-KSSSDQNKAVDIQD 481

Query: 163 SKTPYLQLSNLELG 176
           ++TPY +LSNLE G
Sbjct: 482 TRTPYPRLSNLEEG 495

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350398890|ref|XP_003485341.1| PREDICTED: dyslexia-associated protein KIAA0319-like protein-like [Bombus impatiens]

 Score =  104 bits (260), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 49/74 (66%), Positives = 60/74 (81%), Gaps = 1/74 (1%)

Query: 103 VTKVPDYPPEANAGSDVILYLPNSNVTLNGNMSTDDHGLVSYEWTLRESLNQHKPVDMQK 162
           V KV DYPP ANAG D+I+YLP + +TLNGN+STDDHG+ S+EWT   S +Q+K VDMQ 
Sbjct: 414 VLKVIDYPPSANAGQDIIIYLPQNTLTLNGNLSTDDHGIASWEWTKSPS-DQNKAVDMQN 472

Query: 163 SKTPYLQLSNLELG 176
           ++TPYLQLSNLE G
Sbjct: 473 TRTPYLQLSNLEEG 486

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157132241|ref|XP_001655983.1| serine-type protease inhibitor [Aedes aegypti] gi|108871233|gb|EAT35458.1| AAEL012378-PA [Aedes aegypti]

 Score =  104 bits (260), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 49/74 (66%), Positives = 62/74 (83%), Gaps = 1/74 (1%)

Query: 103 VTKVPDYPPEANAGSDVILYLPNSNVTLNGNMSTDDHGLVSYEWTLRESLNQHKPVDMQK 162
           V K  DYPPEANAG +VI+YLPN+ VTLNG++S DDHG+V++EWT ++S +Q K VDMQ 
Sbjct: 449 VLKEIDYPPEANAGQNVIVYLPNNKVTLNGSLSKDDHGIVAWEWT-KDSKDQSKAVDMQN 507

Query: 163 SKTPYLQLSNLELG 176
           ++TPYLQLSNLE G
Sbjct: 508 TRTPYLQLSNLEEG 521

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340712150|ref|XP_003394627.1| PREDICTED: dyslexia-associated protein KIAA0319-like protein-like [Bombus terrestris]

 Score =  104 bits (259), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 48/74 (64%), Positives = 60/74 (81%), Gaps = 1/74 (1%)

Query: 103 VTKVPDYPPEANAGSDVILYLPNSNVTLNGNMSTDDHGLVSYEWTLRESLNQHKPVDMQK 162
           V K+ DYPP ANAG D+I+YLP + +TLNGN+STDDHG+ S+EWT   S +Q+K VDMQ 
Sbjct: 414 VLKIIDYPPSANAGQDIIIYLPQNTLTLNGNLSTDDHGIASWEWTKSPS-DQNKAVDMQN 472

Query: 163 SKTPYLQLSNLELG 176
           ++TPYLQLSNLE G
Sbjct: 473 TRTPYLQLSNLEEG 486

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380030389|ref|XP_003698831.1| PREDICTED: dyslexia-associated protein KIAA0319-like protein-like [Apis florea]

 Score =  103 bits (258), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 48/74 (64%), Positives = 60/74 (81%), Gaps = 1/74 (1%)

Query: 103 VTKVPDYPPEANAGSDVILYLPNSNVTLNGNMSTDDHGLVSYEWTLRESLNQHKPVDMQK 162
           V KV DYPP ANAG D+I+YLP + +TLNGN+STDDHG+ ++EWT   S +Q+K VDMQ 
Sbjct: 412 VLKVTDYPPSANAGQDIIIYLPQNTLTLNGNLSTDDHGIANWEWTKSPS-DQNKAVDMQN 470

Query: 163 SKTPYLQLSNLELG 176
           ++TPYLQLSNLE G
Sbjct: 471 TRTPYLQLSNLEEG 484

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328783991|ref|XP_395372.3| PREDICTED: dyslexia-associated protein KIAA0319-like protein-like [Apis mellifera]

 Score =  103 bits (258), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 48/74 (64%), Positives = 60/74 (81%), Gaps = 1/74 (1%)

Query: 103 VTKVPDYPPEANAGSDVILYLPNSNVTLNGNMSTDDHGLVSYEWTLRESLNQHKPVDMQK 162
           V KV DYPP ANAG D+I+YLP + +TLNGN+STDDHG+ ++EWT   S +Q+K VDMQ 
Sbjct: 412 VLKVTDYPPSANAGQDIIIYLPQNTLTLNGNLSTDDHGIANWEWTKSPS-DQNKAVDMQN 470

Query: 163 SKTPYLQLSNLELG 176
           ++TPYLQLSNLE G
Sbjct: 471 TRTPYLQLSNLEEG 484

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|170028331|ref|XP_001842049.1| serine-type protease inhibitor [Culex quinquefasciatus] gi|167874204|gb|EDS37587.1| serine-type protease inhibitor [Culex quinquefasciatus]

 Score =  103 bits (256), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 49/74 (66%), Positives = 61/74 (82%), Gaps = 1/74 (1%)

Query: 103 VTKVPDYPPEANAGSDVILYLPNSNVTLNGNMSTDDHGLVSYEWTLRESLNQHKPVDMQK 162
           V K  DYPPEANAG +VI+YLPN+NVTLNG++S DDH +V++EWT + S +Q K VDMQ 
Sbjct: 542 VLKEIDYPPEANAGQNVIVYLPNNNVTLNGSLSKDDHEIVAWEWT-KASSDQSKAVDMQN 600

Query: 163 SKTPYLQLSNLELG 176
           ++TPYLQLSNLE G
Sbjct: 601 TRTPYLQLSNLEEG 614

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307193412|gb|EFN76237.1| Uncharacterized protein KIAA0319 [Harpegnathos saltator]

 Score =  102 bits (255), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 63/139 (45%), Positives = 77/139 (55%), Gaps = 31/139 (22%)

Query: 47  VGYVP---------FGNRAAGNFTKVVPEEGLPMTVEQCVQTCCNDESCNIVFMYRAEGK 97
           +GY P           N  AGN+T         +TVE       N  S NI         
Sbjct: 371 IGYQPNLVDTPTLQLDNLIAGNYT-------FKLTVEDS-DHITNSTSANIT-------- 414

Query: 98  INCFLVTKVPDYPPEANAGSDVILYLPNSNVTLNGNMSTDDHGLVSYEWTLRESLNQHKP 157
                V KV DYPP ANAG D+I+YLP + +TLNGN+STDD G+ S+EWT   S +Q+K 
Sbjct: 415 -----VLKVTDYPPSANAGQDIIIYLPQNTLTLNGNLSTDDRGIASWEWTKSPS-DQNKA 468

Query: 158 VDMQKSKTPYLQLSNLELG 176
           VDMQ ++TPYLQLSNLE G
Sbjct: 469 VDMQNTRTPYLQLSNLEEG 487

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	177
FB|FBgn0035833	1089	CG7565 [Drosophila melanogaste	0.412	0.067	0.608	5.7e-22
UNIPROTKB|Q8IZA0	1049	KIAA0319L "Dyslexia-associated	0.418	0.070	0.52	1.1e-17
UNIPROTKB|Q5RFR6	1049	KIAA0319L "Dyslexia-associated	0.418	0.070	0.52	1.1e-17
UNIPROTKB|F1P358	1050	KIAA0319 "Uncharacterized prot	0.468	0.079	0.5	4.7e-17
UNIPROTKB|F1P359	1056	KIAA0319 "Uncharacterized prot	0.468	0.078	0.5	4.7e-17
UNIPROTKB|F1ML49	1047	KIAA0319L "Uncharacterized pro	0.418	0.070	0.493	5.9e-17
UNIPROTKB|E1BDP2	1066	KIAA0319 "Uncharacterized prot	0.423	0.070	0.473	1.3e-16
UNIPROTKB|E2RD96	1038	KIAA0319 "Uncharacterized prot	0.423	0.072	0.473	3.2e-16
ZFIN|ZDB-GENE-060503-110	967	si:ch211-193k19.1 "si:ch211-19	0.423	0.077	0.5	8.6e-16
UNIPROTKB|Q5VV43	1072	KIAA0319 "Dyslexia-associated	0.423	0.069	0.473	9.1e-16

FB|FBgn0035833 CG7565 [Drosophila melanogaster (taxid:7227)]

 Score = 233 (87.1 bits), Expect = 5.7e-22, Sum P(2) = 5.7e-22
 Identities = 45/74 (60%), Positives = 58/74 (78%)

Query:   103 VTKVPDYPPEANAGSDVILYLPNSNVTLNGNMSTDDHGLVSYEWTLRESLNQHKPVDMQK 162
             V K  DY P ANAG  VILYLPN+NVTLNG  S+DDH +V++EWT +++ ++ K VDMQ 
Sbjct:   518 VLKETDYAPVANAGDAVILYLPNNNVTLNGTASSDDHEIVAWEWT-KDASDEAKAVDMQN 576

Query:   163 SKTPYLQLSNLELG 176
             ++TPY+QLSNLE G
Sbjct:   577 TRTPYVQLSNLEEG 590

GO:0004568 "chitinase activity" evidence=ISS

UNIPROTKB|Q8IZA0 KIAA0319L "Dyslexia-associated protein KIAA0319-like protein" [Homo sapiens (taxid:9606)]

 Score = 200 (75.5 bits), Expect = 1.1e-17, Sum P(2) = 1.1e-17
 Identities = 39/75 (52%), Positives = 54/75 (72%)

Query:   103 VTKVPDYPPEANAGSDVILYLPNSNVTLNGNMSTDDHGLVSYEWTLRESLNQHKPVDMQK 162
             V K  DYPP ANAG + ++ LP +++TL GN STDDHG+ SYEW+L  S ++ K V+MQ 
Sbjct:   495 VNKAVDYPPVANAGPNQVITLPQNSITLFGNQSTDDHGITSYEWSLSPS-SKGKVVEMQG 553

Query:   163 SKTPYLQLSNLELGE 177
              +TP LQLS ++ G+
Sbjct:   554 VRTPTLQLSAMQEGD 568

GO:0016021 "integral to membrane" evidence=IEA

GO:0044433 "cytoplasmic vesicle part" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

UNIPROTKB|Q5RFR6 KIAA0319L "Dyslexia-associated protein KIAA0319-like protein" [Pongo abelii (taxid:9601)]

 Score = 200 (75.5 bits), Expect = 1.1e-17, Sum P(2) = 1.1e-17
 Identities = 39/75 (52%), Positives = 54/75 (72%)

Query:   103 VTKVPDYPPEANAGSDVILYLPNSNVTLNGNMSTDDHGLVSYEWTLRESLNQHKPVDMQK 162
             V K  DYPP ANAG + ++ LP +++TL GN STDDHG+ SYEW+L  S ++ K V+MQ 
Sbjct:   495 VNKAVDYPPVANAGPNQVITLPQNSITLFGNQSTDDHGITSYEWSLSPS-SKGKVVEMQG 553

Query:   163 SKTPYLQLSNLELGE 177
              +TP LQLS ++ G+
Sbjct:   554 VRTPTLQLSAMQEGD 568

GO:0044433 "cytoplasmic vesicle part" evidence=ISS

UNIPROTKB|F1P358 KIAA0319 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 193 (73.0 bits), Expect = 4.7e-17, Sum P(2) = 4.7e-17
 Identities = 42/84 (50%), Positives = 54/84 (64%)

Query:    94 AEGKINCFLVTKVPDYPPEANAGSDVILYLPNSNVTLNGNMSTDDHGLVSYEWTLRESLN 153
             A   I    V K  DYPP ANAG +  + LP + VTLNGN S+DDH +VSYEW+L    +
Sbjct:   490 ANSTIASLSVNKPVDYPPIANAGPNQAVTLPQNFVTLNGNQSSDDHEIVSYEWSLSPR-S 548

Query:   154 QHKPVDMQKSKTPYLQLSNLELGE 177
             + K V MQ  +TPYLQLS ++ G+
Sbjct:   549 KDKVVAMQGVRTPYLQLSAMQEGD 572

GO:0005509 "calcium ion binding" evidence=IEA

GO:0007156 "homophilic cell adhesion" evidence=IEA

GO:0016020 "membrane" evidence=IEA

UNIPROTKB|F1P359 KIAA0319 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 193 (73.0 bits), Expect = 4.7e-17, Sum P(2) = 4.7e-17
 Identities = 42/84 (50%), Positives = 54/84 (64%)

Query:    94 AEGKINCFLVTKVPDYPPEANAGSDVILYLPNSNVTLNGNMSTDDHGLVSYEWTLRESLN 153
             A   I    V K  DYPP ANAG +  + LP + VTLNGN S+DDH +VSYEW+L    +
Sbjct:   496 ANSTIASLSVNKPVDYPPIANAGPNQAVTLPQNFVTLNGNQSSDDHEIVSYEWSLSPR-S 554

Query:   154 QHKPVDMQKSKTPYLQLSNLELGE 177
             + K V MQ  +TPYLQLS ++ G+
Sbjct:   555 KDKVVAMQGVRTPYLQLSAMQEGD 578

GO:0005509 "calcium ion binding" evidence=IEA

GO:0007156 "homophilic cell adhesion" evidence=IEA

GO:0001764 "neuron migration" evidence=IEA

GO:0005769 "early endosome" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:2000171 "negative regulation of dendrite development" evidence=IEA

UNIPROTKB|F1ML49 KIAA0319L "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 194 (73.4 bits), Expect = 5.9e-17, Sum P(2) = 5.9e-17
 Identities = 37/75 (49%), Positives = 54/75 (72%)

Query:   103 VTKVPDYPPEANAGSDVILYLPNSNVTLNGNMSTDDHGLVSYEWTLRESLNQHKPVDMQK 162
             V K  DYPP ANAG + ++ LP +++TL GN STDDHG+ SYEW+L  + ++ K ++MQ 
Sbjct:   493 VNKAVDYPPVANAGPNQVITLPQNSITLFGNQSTDDHGITSYEWSLSPN-SKGKVMEMQG 551

Query:   163 SKTPYLQLSNLELGE 177
              +TP LQLS ++ G+
Sbjct:   552 VRTPTLQLSAMQEGD 566

GO:0044433 "cytoplasmic vesicle part" evidence=IEA

UNIPROTKB|E1BDP2 KIAA0319 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 185 (70.2 bits), Expect = 1.3e-16, Sum P(2) = 1.3e-16
 Identities = 36/76 (47%), Positives = 52/76 (68%)

Query:   102 LVTKVPDYPPEANAGSDVILYLPNSNVTLNGNMSTDDHGLVSYEWTLRESLNQHKPVDMQ 161
             +V    DYPP ANAG +  + LP +++TLNGN S+DDH +V YEW+L    ++++ V MQ
Sbjct:   514 IVNSAVDYPPVANAGPNQTITLPQNSITLNGNQSSDDHQIVLYEWSLVPG-SENQEVAMQ 572

Query:   162 KSKTPYLQLSNLELGE 177
               KTPYL LS ++ G+
Sbjct:   573 GVKTPYLHLSAMKEGD 588

GO:2000171 "negative regulation of dendrite development" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0005769 "early endosome" evidence=IEA

GO:0001764 "neuron migration" evidence=IEA

UNIPROTKB|E2RD96 KIAA0319 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 182 (69.1 bits), Expect = 3.2e-16, Sum P(2) = 3.2e-16
 Identities = 36/76 (47%), Positives = 51/76 (67%)

Query:   102 LVTKVPDYPPEANAGSDVILYLPNSNVTLNGNMSTDDHGLVSYEWTLRESLNQHKPVDMQ 161
             +V    D PP ANAG +  + LP +++TLNGN S+DDH +V YEW+L    +++K V MQ
Sbjct:   486 IVNSAVDCPPVANAGPNQTITLPQNSITLNGNQSSDDHQIVLYEWSLGPG-SENKEVAMQ 544

Query:   162 KSKTPYLQLSNLELGE 177
               KTPYL LS ++ G+
Sbjct:   545 GVKTPYLHLSAMQEGD 560

GO:2000171 "negative regulation of dendrite development" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0005769 "early endosome" evidence=IEA

GO:0001764 "neuron migration" evidence=IEA

ZFIN|ZDB-GENE-060503-110 si:ch211-193k19.1 "si:ch211-193k19.1" [Danio rerio (taxid:7955)]

 Score = 189 (71.6 bits), Expect = 8.6e-16, Sum P(2) = 8.6e-16
 Identities = 38/76 (50%), Positives = 53/76 (69%)

Query:   102 LVTKVPDYPPEANAGSDVILYLPNSNVTLNGNMSTDDHGLVSYEWTLRESLNQHKPVDMQ 161
             LV K  DY P ANAG + ++ LP++ +TLNGN STDDH  +SYEW+L    ++ K V+MQ
Sbjct:   410 LVNKATDYRPTANAGPNQVITLPHNYITLNGNQSTDDHDNLSYEWSLSPE-SKGKVVEMQ 468

Query:   162 KSKTPYLQLSNLELGE 177
               +TP LQLS ++ G+
Sbjct:   469 GVRTPTLQLSAMQEGD 484

GO:0007156 "homophilic cell adhesion" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

UNIPROTKB|Q5VV43 KIAA0319 "Dyslexia-associated protein KIAA0319" [Homo sapiens (taxid:9606)]

 Score = 181 (68.8 bits), Expect = 9.1e-16, Sum P(2) = 9.1e-16
 Identities = 36/76 (47%), Positives = 51/76 (67%)

Query:   102 LVTKVPDYPPEANAGSDVILYLPNSNVTLNGNMSTDDHGLVSYEWTLRESLNQHKPVDMQ 161
             +V    DYPP ANAG +  + LP +++TLNGN S+DDH +V YEW+L    ++ K V MQ
Sbjct:   520 IVNNAVDYPPVANAGPNHTITLPQNSITLNGNQSSDDHQIVLYEWSLGPG-SEGKHVVMQ 578

Query:   162 KSKTPYLQLSNLELGE 177
               +TPYL LS ++ G+
Sbjct:   579 GVQTPYLHLSAMQEGD 594

GO:0016021 "integral to membrane" evidence=IEA

GO:0031901 "early endosome membrane" evidence=IEA

GO:0001764 "neuron migration" evidence=IGI

GO:0005886 "plasma membrane" evidence=IDA

GO:0005769 "early endosome" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:2000171 "negative regulation of dendrite development" evidence=IGI

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q8IZA0	K319L_HUMAN	No assigned EC number	0.52	0.4180	0.0705	yes	N/A
Q8K135	K319L_MOUSE	No assigned EC number	0.52	0.4180	0.0706	yes	N/A
Q5RFR6	K319L_PONAB	No assigned EC number	0.52	0.4180	0.0705	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	177
smart00765	93	smart00765, MANEC, The MANEC domain, formerly call	2e-05

>gnl|CDD|129004 smart00765, MANEC, The MANEC domain, formerly called MANSC

 Score = 40.9 bits (96), Expect = 2e-05
 Identities = 12/34 (35%), Positives = 20/34 (58%), Gaps = 2/34 (5%)

Query: 72  TVEQCVQTCCNDESCN--IVFMYRAEGKINCFLV 103
           T E CV+ CC+  +CN  +  + R + + NC+L 
Sbjct: 39  TWEDCVRACCSTPNCNLAVFELRREDAEGNCYLF 72

This domain, comprising 8 conserved cysteines, is found in the N terminus of higher multicellular animal membrane and extracellular proteins. It is postulated that this domain may play a role in the formation of protein complexes involving various protease activators and inhibitors. It is possible that some of the cysteine residues in the MANSC domain form structurally important disulfide bridges. All of the MANSC-containing proteins contain predicted transmembrane regions and signal peptides. It has been proposed that the MANSC domain in HAI-1 might function through binding with hepatocyte growth factor activator and matriptase. Length = 93

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	177
smart00765	93	MANEC The MANEC domain was formerly called MANSC.	98.38
PF07502	92	MANEC: MANEC domain; InterPro: IPR011106 The MANSC	97.8
PF02010	440	REJ: REJ domain; InterPro: IPR002859 The REJ (Rece	97.31
TIGR00864	2740	PCC polycystin cation channel protein. Note: this	88.41
cd00146	81	PKD polycystic kidney disease I (PKD) domain; simi	83.81
PF02010	440	REJ: REJ domain; InterPro: IPR002859 The REJ (Rece	81.15

>smart00765 MANEC The MANEC domain was formerly called MANSC

Probab=98.38  E-value=1.1e-07  Score=71.69  Aligned_cols=66  Identities=26%  Similarity=0.523  Sum_probs=47.6

Q ss_pred             ccccccccccceeeeeeeCCcce---eeEEEecCCCCCceeEEeccccccCCCeEEEEEeecc-C-CceeeEEEe
Q psy1999          35 KEKCTKIYPKKFVGYVPFGNRAA---GNFTKVVPEEGLPMTVEQCVQTCCNDESCNIVFMYRA-E-GKINCFLVT  104 (177)
Q Consensus        35 ~~~c~~~~~~~f~~~lpl~~l~a---G~Ytf~~~~~~~~lTV~DCvgaCC~~~~CNVal~~~~-~-~~i~CfLv~  104 (177)
                      .+.|...++ ++.+++..++...   ..|-- .|.+  .-+++||+++||++++|||||||.+ + +..+||||+
T Consensus         3 ~~~C~~~f~-~~~n~ii~t~~S~~~Ga~fL~-~p~~--~~s~edC~~aCC~~~~CnlAv~e~~~~~~~~~CyLf~   73 (93)
T smart00765        3 GEDCLGRFR-VLENAIIRTEESLSAGARFLK-SPIA--VNTWEDCVRACCSTPNCNLAVFELRREDAEGNCYLFN   73 (93)
T ss_pred             ccccccccc-cCCCeeeccchhhhccccccC-Cccc--cCCHHHHHHHHcCCCCCcEEEEeccCCCCCCceEEEE
Confidence            456988875 4888888887754   33311 1222  4477999999999999999999953 3 455599996

This domain, comprising 8 conserved cysteines, is found in the N terminus of higher multicellular animal membrane and extracellular proteins. It is postulated that this domain may play a role in the formation of protein complexes involving various protease activators and inhibitors. It is possible that some of the cysteine residues in the MANSC domain form structurally important disulfide bridges. All of the MANSC-containing proteins contain predicted transmembrane regions and signal peptides. It has been proposed that the MANSC domain in HAI-1 might function through binding with hepatocyte growth factor activator and matriptase.

>PF07502 MANEC: MANEC domain; InterPro: IPR011106 The MANSC (motif at N terminus with seven cysteines) domain is a module with a well-conserved seven cysteine motif that is present at the N terminus of higher multicellular animal membrane and extracellular proteins

Probab=97.80  E-value=6.9e-06  Score=61.54  Aligned_cols=34  Identities=29%  Similarity=0.836  Sum_probs=29.0

Q ss_pred             eeEEeccccccCCCeEEEEEeeccC--Ccee-eEEEe
Q psy1999          71 MTVEQCVQTCCNDESCNIVFMYRAE--GKIN-CFLVT  104 (177)
Q Consensus        71 lTV~DCvgaCC~~~~CNVal~~~~~--~~i~-CfLv~  104 (177)
                      .+.+||+++||+++.|||||++...  +..+ ||||+
T Consensus        36 ~s~~dC~~aCC~~~~Cnlav~e~~~~~~~~~~CyLf~   72 (92)
T PF07502_consen   36 SSAEDCVRACCSTPNCNLAVFEERPTGSEDNSCYLFN   72 (92)
T ss_pred             CCHHHHHHHhCCCCCCcEEEEeccCCCCCCceEEEEE
Confidence            3789999999999999999999653  4456 99995

It is possible that some of the cysteine residues in the MANSC domain form structurally important disulphide bridges. All of the MANSC-containing proteins contain predicted transmembrane regions and signal peptides. It has been proposed that the MANSC domain in HAI-1 might function through binding with hepatocyte growth factor activator and matriptase [].

>PF02010 REJ: REJ domain; InterPro: IPR002859 The REJ (Receptor for Egg Jelly) domain is found in PKD1 P98161 from SWISSPROT and the sperm receptor for egg jelly Q26627 from SWISSPROT

Probab=97.31  E-value=0.00015  Score=64.38  Aligned_cols=79  Identities=23%  Similarity=0.331  Sum_probs=22.9

Q ss_pred             eeeeCCcceeeEEEecCCCCCceeEE--eccccccCCCeEEEEEeeccCCceeeEEEecCCCCCCeeecCCCeEEeeCCc
Q psy1999          49 YVPFGNRAAGNFTKVVPEEGLPMTVE--QCVQTCCNDESCNIVFMYRAEGKINCFLVTKVPDYPPEANAGSDVILYLPNS  126 (177)
Q Consensus        49 ~lpl~~l~aG~Ytf~~~~~~~~lTV~--DCvgaCC~~~~CNVal~~~~~~~i~CfLv~k~~n~PPvA~AG~D~~v~lP~~  126 (177)
                      ++|-.-+.+|.|+|       .++|+  +... -.....++|.+             . ..+..|+...|..+++ ...+
T Consensus        41 ~ip~~~L~~G~y~~-------~~~Vt~~~~~~-~~~~~~~~v~V-------------~-~s~l~~~I~gG~~~~~-~~~~   97 (440)
T PF02010_consen   41 TIPPYTLPPGDYTF-------TLTVTASSNPG-LSSTDSVTVTV-------------E-PSPLVAVIKGGSSRTV-GYNS   97 (440)
T ss_dssp             EEECES--SCEEEE-------EEEEE--BCTT-EEEEEEEEEEE-------------E----------------------
T ss_pred             EeCcccCCCCCEEE-------EEEEEEECCCC-ceEEEEEEEEE-------------e-eccceeEEcCCcccee-ecCc
Confidence            45666779999999       88888  4444 45666777773             2 3455667766766666 4557


Q ss_pred             eeEEcCCCcCC-CCC----eeeEEEEEcc
Q psy1999         127 NVTLNGNMSTD-DHG----LVSYEWTLRE  150 (177)
Q Consensus       127 ~v~LnGs~StD-D~~----IvsY~Wt~~~  150 (177)
                      .++|||+.|.| |+.    ..+|.|+-..
T Consensus        98 ~i~ldgs~S~Dpd~~~~~~~l~y~W~C~~  126 (440)
T PF02010_consen   98 DITLDGSQSYDPDGPPGDSGLTYSWSCTD  126 (440)
T ss_dssp             -----------------------------
T ss_pred             eEEEeeEEEecccccccCCceEEEEEEeC
Confidence            89999999999 554    4999999655

The exact function of this domain is unknown. The domain is 600 amino acids long so is probably composed of multiple structural domains. There are six completely conserved cysteine residues that may form disulphide bridges. This region contains tandem PKD-like domains. Sequence similarity between a region of the autosomal dominant polycystic kidney disease (ADPKD) protein, polycystin-1 and a sea urchin sperm glycoprotein involved in fertilization, the receptor for egg jelly (suREJ) has been known for some time. The suREJ protein binds the glycoprotein coat of the egg (egg jelly), triggering the acrosome reaction, which transforms the sperm into a fusogenic cell. The sequence similarity and expression pattern suggests that the predicted human PKDREJ protein is a mammalian equivalent of the suREJ protein and therefore may have a central role in human fertilization [].; PDB: 2E7M_A 2YRL_A.

>TIGR00864 PCC polycystin cation channel protein

Probab=88.41  E-value=1.3  Score=49.65  Aligned_cols=80  Identities=16%  Similarity=0.242  Sum_probs=50.8

Q ss_pred             eeeeCCcceeeEEEecCCCCCceeEEeccccccCCCeEEEEEeeccCCceeeEEEecCCCCCCeeecCCCeEEeeCCcee
Q psy1999          49 YVPFGNRAAGNFTKVVPEEGLPMTVEQCVQTCCNDESCNIVFMYRAEGKINCFLVTKVPDYPPEANAGSDVILYLPNSNV  128 (177)
Q Consensus        49 ~lpl~~l~aG~Ytf~~~~~~~~lTV~DCvgaCC~~~~CNVal~~~~~~~i~CfLv~k~~n~PPvA~AG~D~~v~lP~~~v  128 (177)
                      ++|..-|..|+|.|       .++|.--.--.-....|+|.+              .....-++...|..+++ -=...+
T Consensus      2213 ~IPk~tLp~G~Y~~-------~~~Vs~~~tpl~~sa~~~L~V--------------~~s~LvAVI~GGt~Rtv-s~~~~L 2270 (2740)
T TIGR00864      2213 SLPKLALAAGHYCF-------VFSLSFEDTPLKKAACANLGV--------------AAARLMPIIEGGSYRVW-SDTQDL 2270 (2740)
T ss_pred             eccCcccCcceEEE-------EEEEEEcceEeeeEEEEEEEE--------------EcCCcEEEEcCCCcEEe-ccCccE
Confidence            45777889999999       555422111123334444442              23344455566667777 566799


Q ss_pred             EEcCCCcCC-C-----CCeeeEEEEEcc
Q psy1999         129 TLNGNMSTD-D-----HGLVSYEWTLRE  150 (177)
Q Consensus       129 ~LnGs~StD-D-----~~IvsY~Wt~~~  150 (177)
                      +|||+.|.| |     .+-.+|.|.=..
T Consensus      2271 ~LDGS~SyDPD~~~~~~~~L~Y~W~C~~ 2298 (2740)
T TIGR00864      2271 QLDAEESYDPNLDDDDQSLLHFHWACQA 2298 (2740)
T ss_pred             EEeCccccCCCCCCCCCCCcEEEEEEEE
Confidence            999999988 5     344899999433

Note: this model has been restricted to the amino half because for technical reasons.

>cd00146 PKD polycystic kidney disease I (PKD) domain; similar to other cell-surface modules, with an IG-like fold; domain probably functions as a ligand binding site in protein-protein or protein-carbohydrate interactions; a single instance of the repeat is presented here

Probab=83.81  E-value=4.6  Score=27.59  Aligned_cols=25  Identities=28%  Similarity=0.636  Sum_probs=21.2

Q ss_pred             CceeEEcCCCcCCCCCeeeEEEEEcc
Q psy1999         125 NSNVTLNGNMSTDDHGLVSYEWTLRE  150 (177)
Q Consensus       125 ~~~v~LnGs~StDD~~IvsY~Wt~~~  150 (177)
                      ++.+.|+...+.+ +.+++|.|.+-+
T Consensus        14 ~~~v~~~~~~~~~-~~~~~~~W~fgd   38 (81)
T cd00146          14 GASVTFSASDSSG-GSIVSYKWDFGD   38 (81)
T ss_pred             CccEEEEEEeCCC-CCEEEEEEEeCC
Confidence            6889999887777 789999999866

The domain is also found in microbial collagenases and chitinases.

>PF02010 REJ: REJ domain; InterPro: IPR002859 The REJ (Receptor for Egg Jelly) domain is found in PKD1 P98161 from SWISSPROT and the sperm receptor for egg jelly Q26627 from SWISSPROT

Probab=81.15  E-value=0.48  Score=42.19  Aligned_cols=74  Identities=23%  Similarity=0.416  Sum_probs=0.0

Q ss_pred             eeCCcceee-EEEecCCCCCceeEEeccccccCCCeEEEEEeeccCCceeeEEEecCCCCCCeeecCC-C---eEEeeCC
Q psy1999          51 PFGNRAAGN-FTKVVPEEGLPMTVEQCVQTCCNDESCNIVFMYRAEGKINCFLVTKVPDYPPEANAGS-D---VILYLPN  125 (177)
Q Consensus        51 pl~~l~aG~-Ytf~~~~~~~~lTV~DCvgaCC~~~~CNVal~~~~~~~i~CfLv~k~~n~PPvA~AG~-D---~~v~lP~  125 (177)
                      |-..+.+|. |+|       +|++++-.+ -.....-.|.+.               .+.||...... +   ..| -|+
T Consensus       153 ~~~~l~~~~~y~f-------~ltv~k~~r-~s~s~~~~v~v~---------------~~~~p~v~I~~~~n~~~~v-n~~  208 (440)
T PF02010_consen  153 PASTLSPGSTYTF-------TLTVSKGSR-SSSSASQTVTVV---------------SGDPPTVSISCVSNCKGKV-NPS  208 (440)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             EhHHcCCCceEEE-------EEEEEeCCC-CceeeEEEEEec---------------cCCCCceeEcccccccccc-CCC
Confidence            456789999 999       999999887 234444444421               13344433332 1   225 799


Q ss_pred             ceeEEcCCCcCCC--CCeeeEEEEE
Q psy1999         126 SNVTLNGNMSTDD--HGLVSYEWTL  148 (177)
Q Consensus       126 ~~v~LnGs~StDD--~~IvsY~Wt~  148 (177)
                      +.++|.+.-+.++  ...+.|.|++
T Consensus       209 ~~l~L~~~~~~~~~~~~~~~y~Wsl  233 (440)
T PF02010_consen  209 ERLVLQASCSSCDSDSSNVSYSWSL  233 (440)
T ss_dssp             -------------------------
T ss_pred             CCEEEEEEEeCCCCcCCCEEEEEEE
Confidence            9999999999555  7899999997

The exact function of this domain is unknown. The domain is 600 amino acids long so is probably composed of multiple structural domains. There are six completely conserved cysteine residues that may form disulphide bridges. This region contains tandem PKD-like domains. Sequence similarity between a region of the autosomal dominant polycystic kidney disease (ADPKD) protein, polycystin-1 and a sea urchin sperm glycoprotein involved in fertilization, the receptor for egg jelly (suREJ) has been known for some time. The suREJ protein binds the glycoprotein coat of the egg (egg jelly), triggering the acrosome reaction, which transforms the sperm into a fusogenic cell. The sequence similarity and expression pattern suggests that the predicted human PKDREJ protein is a mammalian equivalent of the suREJ protein and therefore may have a central role in human fertilization [].; PDB: 2E7M_A 2YRL_A.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	177
2yrl_A	102	KIAA1837 protein; PKD domain, NPPSFA, national pro	5e-13
2e7m_A	113	Protein KIAA0319; PKD domain, structural genomics,	1e-08

>2yrl_A KIAA1837 protein; PKD domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 102

 Score = 61.0 bits (148), Expect = 5e-13
 Identities = 16/39 (41%), Positives = 24/39 (61%)

Query: 110 PPEANAGSDVILYLPNSNVTLNGNMSTDDHGLVSYEWTL 148
             +A+AG D  L LP  + TL+G+ S+DD  ++SY W  
Sbjct: 6   SGQADAGPDKELTLPVDSTTLDGSKSSDDQKIISYLWEK 44

>2e7m_A Protein KIAA0319; PKD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 113

 Score = 49.6 bits (118), Expect = 1e-08
 Identities = 16/75 (21%), Positives = 32/75 (42%), Gaps = 3/75 (4%)

Query: 104 TKVPDYPPEANAGSDVILYLPNSNVTLNGNMSTDDHG--LVSYEWTLRESLNQHKPVDMQ 161
                     +AG ++I+ LP++ V L   ++         +YEW L      ++  +++
Sbjct: 7   GPRTVKELTVSAGDNLIITLPDNEVELKAFVAPAPPVETTYNYEWNLISHPTDYQ-GEIK 65

Query: 162 KSKTPYLQLSNLELG 176
           +     L LS L +G
Sbjct: 66  QGHKQTLNLSQLSVG 80

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	177
2yrl_A	102	KIAA1837 protein; PKD domain, NPPSFA, national pro	99.52
2e7m_A	113	Protein KIAA0319; PKD domain, structural genomics,	99.33
2yhg_A	437	SDE_182CT, cellulose-binding protein; hydrolase, g	98.14
2y72_A	85	Collagenase, collagenase G; polycystic kidney dise	97.8
2y3u_A	785	Collagenase, collagenase G; hydrolase, gluzincin,	96.93
2c4x_A	260	Endoglucanase, ctcel9D-CEL44A; cellulase ctcel9D-C	96.83
2e7m_A	113	Protein KIAA0319; PKD domain, structural genomics,	93.52
2yrl_A	102	KIAA1837 protein; PKD domain, NPPSFA, national pro	91.48
3pdd_A	190	Glycoside hydrolase, family 9; CBHA, beta-sandwich	88.63
2c4x_A	260	Endoglucanase, ctcel9D-CEL44A; cellulase ctcel9D-C	86.94
2y72_A	85	Collagenase, collagenase G; polycystic kidney dise	80.8

>2yrl_A KIAA1837 protein; PKD domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.52  E-value=1.6e-14  Score=106.86  Aligned_cols=68  Identities=28%  Similarity=0.523  Sum_probs=61.3

Q ss_pred             CCCCCeeecCCCeEEeeCCceeEEcCCCcCCCCCeeeEEEEEcccCCCCccEEeccCCCCeEEeccCccCC
Q psy1999         107 PDYPPEANAGSDVILYLPNSNVTLNGNMSTDDHGLVSYEWTLRESLNQHKPVDMQKSKTPYLQLSNLELGE  177 (177)
Q Consensus       107 ~n~PPvA~AG~D~~v~lP~~~v~LnGs~StDD~~IvsY~Wt~~~~~~g~~~V~m~~~~~~~l~LSnL~eG~  177 (177)
                      .|+||+|+||.|+++.+|.+.|+|+|++|+||++|++|+|++.+   |+..+.+...+.+.+.++.+++|+
T Consensus         3 ~N~~PvA~ag~d~~v~~~~~~v~L~gs~S~DDg~~lsY~W~~~~---Gp~~~~l~~~~~~~~~~t~~~~G~   70 (102)
T 2yrl_A            3 SGSSGQADAGPDKELTLPVDSTTLDGSKSSDDQKIISYLWEKTQ---GPDGVQLENANSSVATVTGLQVGT   70 (102)
T ss_dssp             CCCCCSCCCCSCEEEETTCCEEEEECCTTCSSSCBCCCCEEEEE---SCTTCEEESTTSSEEEEESCCSSE
T ss_pred             CCCCCEEEeCCCcEEecCCeEEEEEeEeccCCCCeEEEEEEECC---CCceeEEccCCCccEEEECCCCeE
Confidence            58999999999999999999999999999999999999999988   455688888888899999888873

>2e7m_A Protein KIAA0319; PKD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.33  E-value=4.7e-13  Score=102.89  Aligned_cols=70  Identities=23%  Similarity=0.380  Sum_probs=62.2

Q ss_pred             CCCCCeeecCCCeEEeeCCceeEEcCCCcCCCC--CeeeEEEEEcccCCCCccEEeccCCCCeEEeccCccCC
Q psy1999         107 PDYPPEANAGSDVILYLPNSNVTLNGNMSTDDH--GLVSYEWTLRESLNQHKPVDMQKSKTPYLQLSNLELGE  177 (177)
Q Consensus       107 ~n~PPvA~AG~D~~v~lP~~~v~LnGs~StDD~--~IvsY~Wt~~~~~~g~~~V~m~~~~~~~l~LSnL~eG~  177 (177)
                      ..++++..||.|++|+||.|.|+|+|..+.||.  .|.+|+|+++++. .+..+.|++.+..+|+||+|+||.
T Consensus        10 ~~k~l~Vsag~~~~i~LP~n~v~L~a~v~pd~~~~~~ysyeWtli~gP-~d~~~~~~~~~~~tlkLS~L~eG~   81 (113)
T 2e7m_A           10 TVKELTVSAGDNLIITLPDNEVELKAFVAPAPPVETTYNYEWNLISHP-TDYQGEIKQGHKQTLNLSQLSVGL   81 (113)
T ss_dssp             CCEECEEECCSCEEEETTCCCEEEECEEESCCCSSCCCCCBCCEEECC-TTCCCCCCTTSSSEEEECSCCSEE
T ss_pred             cccccEEEcCCCeEEECCCCcEEEEEEECCCCCCCCEEeeEEEEecCC-CCCceEEecCCCCeeEecCcCcEE
Confidence            356789999999999999999999999999974  4999999999953 256899999999999999999994

>2yhg_A SDE_182CT, cellulose-binding protein; hydrolase, glycoside hydrolase; HET: BTB; 1.08A {Saccharophagus degradans}

Probab=98.14  E-value=3e-06  Score=77.36  Aligned_cols=66  Identities=17%  Similarity=0.266  Sum_probs=51.0

Q ss_pred             cCCCCCCeee-cCC------CeEEeeCCceeEEcCCCcCC-CCCeeeEEEEEcccCCC-CccEEeccCCCCeEEec
Q psy1999         105 KVPDYPPEAN-AGS------DVILYLPNSNVTLNGNMSTD-DHGLVSYEWTLRESLNQ-HKPVDMQKSKTPYLQLS  171 (177)
Q Consensus       105 k~~n~PPvA~-AG~------D~~v~lP~~~v~LnGs~StD-D~~IvsY~Wt~~~~~~g-~~~V~m~~~~~~~l~LS  171 (177)
                      ...|+||+|+ +|.      ++++ .++++|+|+|++|+| |+.+.+|.|++..+... ...|.+.+.+.+.+.++
T Consensus       328 ~~aNhaPVa~iag~~g~~p~~~~v-~aG~tVtLdAs~SsDPDGD~LtY~W~q~~g~g~~~~~vtls~~~~~~~sft  402 (437)
T 2yhg_A          328 SAANHHPVPVVNNDANEAVMYLNA-SAGSTVSLDASGSSDPDGDSLNYSWSHYGEADSYSGSVSISNSSSASANVQ  402 (437)
T ss_dssp             GGSCCCCBCCBTTBCCSSCEEEEE-CTTCEEEEECTTCBCTTCCCEEEEEEECTTTSSCCSCCCEETTTSSEEEEE
T ss_pred             ccCCCCCEEEecCCCcccccceEe-cCCCEEEEEeeeeeCCCCCeEEEEEEEeCCCCccccceEeecCCCceEEEE
Confidence            4679999999 787      7888 799999999999999 99999999998774211 13666665555555554

>2y72_A Collagenase, collagenase G; polycystic kidney disease domain, beta barrel, collagen RECO domain, hydrolase; 1.18A {Clostridium histolyticum} PDB: 3jqu_A 3js7_A

Probab=97.80  E-value=1.4e-05  Score=56.43  Aligned_cols=41  Identities=24%  Similarity=0.403  Sum_probs=36.2

Q ss_pred             CCeeecCCCeEEeeCCceeEEcCCCcCC-CCCeeeEEEEEccc
Q psy1999         110 PPEANAGSDVILYLPNSNVTLNGNMSTD-DHGLVSYEWTLRES  151 (177)
Q Consensus       110 PPvA~AG~D~~v~lP~~~v~LnGs~StD-D~~IvsY~Wt~~~~  151 (177)
                      ||+|+++.+..+ .....|+|+|+.|.| |+.|++|.|.+-+|
T Consensus         2 ~Pva~~~~~~~~-~~~~~v~f~~~~s~d~~g~~~~y~W~fgdG   43 (85)
T 2y72_A            2 GTIAKVTGPSTG-AVGRNIEFSGKDSKDEDGKIVSYDWDFGDG   43 (85)
T ss_dssp             CCBCCCEEESEE-ETTCEEEEECTTCBCTTSCEEEEEEECSSS
T ss_pred             CCEEEEeCCCcc-CCCcEEEEEEecccCCCCCEEEEEEEECCC
Confidence            899999998888 567899999999988 78899999998664

>2y3u_A Collagenase, collagenase G; hydrolase, gluzincin, metalloprotease; HET: P6G FLC; 2.55A {Clostridium histolyticum} PDB: 2y50_A* 2y6i_A*

Probab=96.93  E-value=0.00031  Score=68.11  Aligned_cols=46  Identities=24%  Similarity=0.399  Sum_probs=0.0

Q ss_pred             cCCCCCCeeecCCCeEEeeCCceeEEcCCCcCC-CCCeeeEEEEEccc
Q psy1999         105 KVPDYPPEANAGSDVILYLPNSNVTLNGNMSTD-DHGLVSYEWTLRES  151 (177)
Q Consensus       105 k~~n~PPvA~AG~D~~v~lP~~~v~LnGs~StD-D~~IvsY~Wt~~~~  151 (177)
                      ...|.||+|+++.+..+ .+..+|+|+|+.|+| |+.|++|.|.+-+|
T Consensus       697 ~~~N~~PvA~f~~~~sg-~~p~tV~F~gs~SsD~dG~i~sY~WdFGDG  743 (785)
T 2y3u_A          697 ISNNKAPIAKVTGPSTG-AVGRNIEFSGKDSKDEDGKIVSYDWDFGDG  743 (785)
T ss_dssp             ------------------------------------------------
T ss_pred             ccCCCCCceEEeCCccc-CCCceEEEecccccCCCCCEEEEEEEeCCC
Confidence            35699999999999888 455789999999987 88899999998775

>2c4x_A Endoglucanase, ctcel9D-CEL44A; cellulase ctcel9D-CEL44A, PKD domain, CBM44, carbohydrate BI module, beta-sandwich proteins, cellulosome; 2.0A {Clostridium thermocellum} PDB: 2c26_A

Probab=96.83  E-value=0.00046  Score=58.71  Aligned_cols=46  Identities=22%  Similarity=0.290  Sum_probs=38.5

Q ss_pred             CCCCCCeeecCCCeEEeeCCceeEEcCCCcCC-CCCeeeEEEEEccc
Q psy1999         106 VPDYPPEANAGSDVILYLPNSNVTLNGNMSTD-DHGLVSYEWTLRES  151 (177)
Q Consensus       106 ~~n~PPvA~AG~D~~v~lP~~~v~LnGs~StD-D~~IvsY~Wt~~~~  151 (177)
                      ..|.||+|++..+.....+..+|+|+++.|+| |+.|++|.|.+-+|
T Consensus         5 ~~N~~PvA~ft~~~~~g~~~~tV~F~~s~StD~dG~i~sy~WdFGDG   51 (260)
T 2c4x_A            5 PENQAPKAIFTFSPEDPVTDENVVFNASNSIDEDGTIAYYVWDFGDG   51 (260)
T ss_dssp             CCCCCCBCCCEEESSSCBTTCCEEEECTTCBCSSSCEEEEEEECSSS
T ss_pred             CCCCCCEEEEEecccccCCCcEEEEEeccccCCCCCEEEEEEEeCCC
Confidence            56999999998765433677899999999988 88899999998664

>2e7m_A Protein KIAA0319; PKD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=93.52  E-value=0.056  Score=41.27  Aligned_cols=35  Identities=11%  Similarity=0.111  Sum_probs=31.2

Q ss_pred             eeeeeeCCcceeeEEEecCCCCCceeEEeccccccCCCeEEEEE
Q psy1999          47 VGYVPFGNRAAGNFTKVVPEEGLPMTVEQCVQTCCNDESCNIVF   90 (177)
Q Consensus        47 ~~~lpl~~l~aG~Ytf~~~~~~~~lTV~DCvgaCC~~~~CNVal   90 (177)
                      ...+.|.+|++|.|+|       +|||+|..+  -.+...||+|
T Consensus        69 ~~tlkLS~L~eG~Y~F-------qltVtd~~~--~ge~~vnVTV  103 (113)
T 2e7m_A           69 KQTLNLSQLSVGLYVF-------KVTVSSENA--FGEGFVNVTV  103 (113)
T ss_dssp             SSEEEECSCCSEEEEE-------CCEEEETTE--EEECCEEEEE
T ss_pred             CCeeEecCcCcEEEEE-------EEEEECCCC--CccceEEEEE
Confidence            4678999999999999       999999998  5788899995

>2yrl_A KIAA1837 protein; PKD domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=91.48  E-value=0.19  Score=36.33  Aligned_cols=31  Identities=16%  Similarity=0.249  Sum_probs=25.7

Q ss_pred             eCCcceeeEEEecCCCCCceeEEeccccccCCCeEEEEE
Q psy1999          52 FGNRAAGNFTKVVPEEGLPMTVEQCVQTCCNDESCNIVF   90 (177)
Q Consensus        52 l~~l~aG~Ytf~~~~~~~~lTV~DCvgaCC~~~~CNVal   90 (177)
                      +...++|.|+|       +|||+|..+ ..++...+|.|
T Consensus        63 ~t~~~~G~y~f-------~LTVtD~~G-~s~s~~v~VtV   93 (102)
T 2yrl_A           63 VTGLQVGTYVF-------TLTVKDERN-LQSQSSVNVIV   93 (102)
T ss_dssp             EESCCSSEEEE-------EEEEEBTTC-CEEEEEEEEEE
T ss_pred             EECCCCeEEEE-------EEEEEeCCC-CEEEeEEEEEE
Confidence            44568999999       999999999 57777888884

>3pdd_A Glycoside hydrolase, family 9; CBHA, beta-sandwich, cellulosome, unknown function; 1.72A {Clostridium thermocellum} PDB: 3pdg_A

Probab=88.63  E-value=2.3  Score=33.60  Aligned_cols=74  Identities=11%  Similarity=0.134  Sum_probs=49.2

Q ss_pred             eCCcceeeEEEecCCCCCceeEEeccccccCCCeEEEEEeeccCCceeeEEEecCCCCCCeeecC---CCeEEeeCCcee
Q psy1999          52 FGNRAAGNFTKVVPEEGLPMTVEQCVQTCCNDESCNIVFMYRAEGKINCFLVTKVPDYPPEANAG---SDVILYLPNSNV  128 (177)
Q Consensus        52 l~~l~aG~Ytf~~~~~~~~lTV~DCvgaCC~~~~CNVal~~~~~~~i~CfLv~k~~n~PPvA~AG---~D~~v~lP~~~v  128 (177)
                      ...+.+|.|++       ..+.+|-.|.-..+...+|.+             ..  +.||.....   ....+ .....+
T Consensus        55 ~~~~~~G~htl-------ta~A~D~aGn~s~s~~v~vtV-------------~~--~~~Ptv~itsP~~g~~~-~~~~~v  111 (190)
T 3pdd_A           55 ITGAAVGAYNL-------KAVAVLSDGRRIESPVTPVLV-------------KV--IVKPTVKLTAPKSNVVA-YGNEFL  111 (190)
T ss_dssp             ECSCCSEEEEE-------EEEEEETTSCEEECCCEEEEE-------------EC--CCCCEEEEEECCTTCCC-BTTSEE
T ss_pred             eccCCCccEEE-------EEEEEECCCCEeeecceeEEe-------------cc--CCCCceeecCCCCCcEE-ecCCeE
Confidence            34467899999       889999999654555567773             22  777865311   11122 134578


Q ss_pred             EEcCCCcCCCCCeeeEEEEE
Q psy1999         129 TLNGNMSTDDHGLVSYEWTL  148 (177)
Q Consensus       129 ~LnGs~StDD~~IvsY~Wt~  148 (177)
                      +|.++.+.+|++|.+|+|.+
T Consensus       112 tl~~~AsD~~g~V~~Ve~~~  131 (190)
T 3pdd_A          112 KITATASDSDGKISRVDFLV  131 (190)
T ss_dssp             EEEEEEECSSSCEEEEEEEE
T ss_pred             EEEEEEECCCCcEEEEEEEE
Confidence            88898886677799999883

>2c4x_A Endoglucanase, ctcel9D-CEL44A; cellulase ctcel9D-CEL44A, PKD domain, CBM44, carbohydrate BI module, beta-sandwich proteins, cellulosome; 2.0A {Clostridium thermocellum} PDB: 2c26_A

Probab=86.94  E-value=0.54  Score=39.75  Aligned_cols=31  Identities=10%  Similarity=0.221  Sum_probs=24.7

Q ss_pred             eCCcceeeEEEecCCCCCceeEEeccccccCCCeEEEEE
Q psy1999          52 FGNRAAGNFTKVVPEEGLPMTVEQCVQTCCNDESCNIVF   90 (177)
Q Consensus        52 l~~l~aG~Ytf~~~~~~~~lTV~DCvgaCC~~~~CNVal   90 (177)
                      ..-.++|+|++       +|||+|..| |.++....|.|
T Consensus        63 htY~~~GtYtV-------tLTVtD~~G-~s~t~t~~ItV   93 (260)
T 2c4x_A           63 YKYKNPGTYKV-------KLIVTDNQG-ASSSFTATIKV   93 (260)
T ss_dssp             ECCSSCEEEEE-------EEEEEETTS-CEEEEEEEEEE
T ss_pred             EEeCCCEEEEE-------EEEEEeCCC-CeEEEEEEEEE
Confidence            44458999999       999999999 66666777773

>2y72_A Collagenase, collagenase G; polycystic kidney disease domain, beta barrel, collagen RECO domain, hydrolase; 1.18A {Clostridium histolyticum} PDB: 3jqu_A 3js7_A

Probab=80.80  E-value=1.2  Score=30.73  Aligned_cols=29  Identities=21%  Similarity=0.276  Sum_probs=23.7

Q ss_pred             CcceeeEEEecCCCCCceeEEeccccccCCCeEEEEE
Q psy1999          54 NRAAGNFTKVVPEEGLPMTVEQCVQTCCNDESCNIVF   90 (177)
Q Consensus        54 ~l~aG~Ytf~~~~~~~~lTV~DCvgaCC~~~~CNVal   90 (177)
                      -.++|+|++       +|+|+|..+ |..+....|.|
T Consensus        55 y~~~G~Y~v-------~LtVtd~~G-~~~t~~~~V~V   83 (85)
T 2y72_A           55 YKKAGTYNV-------TLKVTDDKG-ATATESFTIEI   83 (85)
T ss_dssp             CSSCEEEEE-------EEEEEETTS-CEEEEEEEEEE
T ss_pred             cCCCeEEEE-------EEEEEECCC-CEEEEEEEEEE
Confidence            448999999       999999999 77777766663

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00