Psyllid ID: psy2358


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------
MSKENQLTCGKWIAQPIPTDITAKLLGNRVAVSPIVTIEPRRRKFHKPITLTIPVPQAANKGMINQYSGDAPTLRLLCSITGGTARAQWEDVTGTTPLTFVKDCVSFTTTVSARFWLMDCRNVQDSAKMATELYREAIHVPFMAKFVVFAKRIEQLEARLRVFCMTDDKEDKTLEHQEHFTEVAKSRDVEVLEGKSQFVEFAGNLVPVTKSGDQLRLGFRAFRENRLPFTVRVKDPHADVIGRTLFMREPKVSKGEAPQQPICVSKGEAPQQPICVLNIVLPDDIIPETSLPESELTRYQYLTDSSGTARAQWEDVTGTTPLTFVKDCVSFTTTVSARFWLMDCRNVQDSAKMATELYREAIHVPFMAKFVVFAKRIEQLEARLRVFCMTDDKEDKTLEHQEHFTEVAKSRDVELLR
cccccccccccEEcccccHHHHHHHHccccccccEEEEccccccccccEEEEEccccccccccccccccccccEEEEEccccccccccccccccccEEEEEEEEEEEEEEccccEEEEEcccHHHHHHHHHHHHHHHccccEEEEEEEEEEEcccccEEEEEEEEcccccccccccccccccccccccEEEEcccEEEEEEEcccccccccccEEEEEEEEEcccEEEEEEEEEcccccccEEEEEEEcccccccccccccccccccccccccEEEEEEEccccccccccccccccccEEEcccccccccccccccccccccEEEcccccccHHHHHHHHccccccHHHHHHHHHHHHHHHHccccEEEEEEEEEccccccEEEEEEEEEccccccccccccccEEEEEcccccccc
ccccccccccHHEcccccHHHHHHHHccccEEccEEEEccccHcccccEEEEEccccccccccccccccccccEEEEEEEccccccccHHcccccccEEEEccEEEEEEEEEEEEEEcccccHHHHHHHHHHHHHHHHHcHHHHEEEEEEccccccEEEEEEEEccccccccHHHHHHcHHHHHHcccEEEEccccEEEEEccccEEEEccccEEEEEEEEcccccccEEEEEEccccccccEEEEccccccccccEEEEEEcccccccccccEEEEEEEcccccccccccccccccEEEEcccccccccccHHHccccccEEEEEccccccccHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEHccccccccEEEEEcccccHcHHHHHHccHHHHHccccEEEcc
mskenqltcgkwiaqpiptditakllgnrvavspivtieprrrkfhkpitltipvpqaankgminqysgdaptlRLLCSITggtaraqwedvtgttpltfvKDCVSFTTTVSARFWLMDCRNVQDSAKMATELYREAIHVPFMAKFVVFAKRIEQLEARLRVFCMtddkedktlEHQEHFTEVAKSRDVEVLEGKSQFVEFagnlvpvtksgdqLRLGFRAfrenrlpftvrvkdphadvigrtlfmrepkvskgeapqqpicvskgeapqqpicvlnivlpddiipetslpeseltRYQYLtdssgtaraqwedvtgttpltfvKDCVSFTTTVSARFWLMDCRNVQDSAKMATELYREAIHVPFMAKFVVFAKRIEQLEARLRVFCMtddkedktlEHQEHFTEVAKSRDVELLR
mskenqltcgkwiaqpiptditakllgnrvavspivtieprrrkfhkpitltipvpqaankGMINQYSGDAPTLRLLCSITGGTARAQWEDVTGTTPLTFVKDCVSFTTTVSARFWLMDCRNVQDSAKMATELYREAIHVPFMAKFVVFAKRIEQLEARLRVFCMTDDKEDKTLEHQEHftevaksrdveVLEGKSQFVefagnlvpvtksgdqLRLGFRAFrenrlpftvrvkdphadvIGRTLfmrepkvskgeapQQPICVSKGEAPQQPICVLNIVLPDDIIPETSLPESELTRYQYLTDSSGTARAQWEDVtgttpltfvkDCVSFTTTVSARFWLMDCRNVQDSAKMATELYREAIHVPFMAKFVVFAKRIEQLEARLRVFCMTDDKedktlehqehftevaksrdvellr
MSKENQLTCGKWIAQPIPTDITAKLLGNRVAVSPIVTIEPRRRKFHKPITLTIPVPQAANKGMINQYSGDAPTLRLLCSITGGTARAQWEDVTGTTPLTFVKDCVSFTTTVSARFWLMDCRNVQDSAKMATELYREAIHVPFMAKFVVFAKRIEQLEARLRVFCMTDDKEDKTLEHQEHFTEVAKSRDVEVLEGKSQFVEFAGNLVPVTKSGDQLRLGFRAFRENRLPFTVRVKDPHADVIGRTLFMREPKVSKGEAPQQPICVSKGEAPQQPICVLNIVLPDDIIPETSLPESELTRYQYLTDSSGTARAQWEDVTGTTPLTFVKDCVSFTTTVSARFWLMDCRNVQDSAKMATELYREAIHVPFMAKFVVFAKRIEQLEARLRVFCMTDDKEDKTLEHQEHFTEVAKSRDVELLR
******LTCGKWIAQPIPTDITAKLLGNRVAVSPIVTIEPRRRKFHKPITLTIPVPQAANKGMINQYSGDAPTLRLLCSITGGTARAQWEDVTGTTPLTFVKDCVSFTTTVSARFWLMDCRNVQDSAKMATELYREAIHVPFMAKFVVFAKRIEQLEARLRVFCMTD********************DVEVLEGKSQFVEFAGNLVPVTKSGDQLRLGFRAFRENRLPFTVRVKDPHADVIGRTLFM************************QPICVLNIVLPDDIIPETSLPESELTRYQYLTDSSGTARAQWEDVTGTTPLTFVKDCVSFTTTVSARFWLMDCRNVQDSAKMATELYREAIHVPFMAKFVVFAKRIEQLEARLRVFCMT***************************
******L*CGKWIAQPIPTDITAKLLGNRVAVSPIVTIEPRRRKFHKPITLTIPVPQ*************APTLRLLCSITGGTARAQWEDVTGTTPLTFVKDCVSFTTTVSARFWLMDCRNVQDSAKMATELYREAIHVPFMAKFVVFAKRIEQLEARLRVFCMTDDKEDKTLEHQ******AK***VEVLEGKSQFVEFAGNLVPVTKSGDQLRLGFRAFRENRLPFTVRVKDPHADVIGRTLFMREP******************APQQPICVLNIV*****************************************LTFVKDCVSFTTTVSARFWLMDCRNVQDSAKMATELYREAIHVPFMAKFVVFAKRIEQLEARLRVFCMTDDKEDKTLEHQEHFTEVAKSRDVELL*
********CGKWIAQPIPTDITAKLLGNRVAVSPIVTIEPRRRKFHKPITLTIPVPQAANKGMINQYSGDAPTLRLLCSITGGTARAQWEDVTGTTPLTFVKDCVSFTTTVSARFWLMDCRNVQDSAKMATELYREAIHVPFMAKFVVFAKRIEQLEARLRVFCMTDDKEDKTLEHQEHFTEVAKSRDVEVLEGKSQFVEFAGNLVPVTKSGDQLRLGFRAFRENRLPFTVRVKDPHADVIGRTLFMREP*********QPICVSKGEAPQQPICVLNIVLPDDIIPETSLPESELTRYQYLTDSSGTARAQWEDVTGTTPLTFVKDCVSFTTTVSARFWLMDCRNVQDSAKMATELYREAIHVPFMAKFVVFAKRIEQLEARLRVFCMTDDKEDKTLEHQEHFTEVAKSRDVELLR
*****QLTCGKWIAQPIPTDITAKLLGNRVAVSPIVTIEPRRRKFHKPITLTIPVPQAANKGMINQYSGDAPTLRLLCSITGGTARAQWEDVTGTTPLTFVKDCVSFTTTVSARFWLMDCRNVQDSAKMATELYREAIHVPFMAKFVVFAKRIEQLEARLRVFCMTDDKEDKTLEHQEHFTEVAKSRDVEVLEGKSQFVEFAGNLVPVTKSGDQLRLGFRAFRENRLPFTVRVKDPHADVIGRTLFMREPKVSKGEAPQQPICVSKGEAPQQPICVLNIVLPDDI********SELTRYQYLTDSS*TARAQWEDVTGTTPLTFVKDCVSFTTTVSARFWLMDCRNVQDSAKMATELYREAIHVPFMAKFVVFAKRIEQLEARLRVFCMTDDKEDKTLEHQEHFTEVAKSRDVE***
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MSKENQLTCGKWIAQPIPTDITAKLLGNRVAVSPIVTIEPRRRKFHKPITLTIPVPQAANKGMINQYSGDAPTLRLLCSITGGTARAQWEDVTGTTPLTFVKDCVSFTTTVSARFWLMDCRNVQDSAKMATELYREAIHVPFMAKFVVFAKRIEQLEARLRVFCMTDDKEDKTLEHQEHFTEVAKSRDVEVLEGKSQFVEFAGNLVPVTKSGDQLRLGFRAFRENRLPFTVRVKDPHADVIGRTLFMREPKVSKGEAPQQPICVSKGEAPQQPICVLNIVLPDDIIPETSLPESELTRYQYLTDSSGTARAQWEDVTGTTPLTFVKDCVSFTTTVSARFWLMDCRNVQDSAKMATELYREAIHVPFMAKFVVFAKRIEQLEARLRVFCMTDDKEDKTLEHQEHFTEVAKSRDVELLR
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query417 2.2.26 [Sep-21-2011]
Q12955 4377 Ankyrin-3 OS=Homo sapiens yes N/A 0.709 0.067 0.535 6e-95
Q8C8R3 3898 Ankyrin-2 OS=Mus musculus yes N/A 0.613 0.065 0.617 9e-95
Q01484 3957 Ankyrin-2 OS=Homo sapiens no N/A 0.613 0.064 0.617 1e-94
G5E8K5 1961 Ankyrin-3 OS=Mus musculus no N/A 0.671 0.142 0.553 3e-93
P16157 1881 Ankyrin-1 OS=Homo sapiens no N/A 0.611 0.135 0.509 1e-74
Q02357 1862 Ankyrin-1 OS=Mus musculus no N/A 0.611 0.136 0.505 2e-73
>sp|Q12955|ANK3_HUMAN Ankyrin-3 OS=Homo sapiens GN=ANK3 PE=1 SV=3 Back     alignment and function desciption
 Score =  348 bits (892), Expect = 6e-95,   Method: Compositional matrix adjust.
 Identities = 175/327 (53%), Positives = 221/327 (67%), Gaps = 31/327 (9%)

Query: 14   AQPIPTDITAKLLGNRVAVSPIVTIEPRRRKFHKPITLTIPVPQAANKGMINQYSGDA-P 72
            AQP+P +I  K+LGN+   SPIVT+EPRRRKFHKPIT+TIPVP  + +G+ N Y GD  P
Sbjct: 1181 AQPVPDEIVKKILGNKATFSPIVTVEPRRRKFHKPITMTIPVPPPSGEGVSNGYKGDTTP 1240

Query: 73   TLRLLCSITGGTARAQWEDVTGTTPLTFVKDCVSFTTTVSARFWLMDCRNVQDSAKMATE 132
             LRLLCSITGGT+ AQWED+TGTTPLTF+KDCVSFTT VSARFWL DC  V ++  +AT+
Sbjct: 1241 NLRLLCSITGGTSPAQWEDITGTTPLTFIKDCVSFTTNVSARFWLADCHQVLETVGLATQ 1300

Query: 133  LYREAIHVPFMAKFVVFAKRIEQLEARLRVFCMTDDKEDKTLEHQEHFTEVAKSRDVEVL 192
            LYRE I VP+MAKFVVFAK  + +E+ LR FCMTDDK DKTLE QE+F EVA+S+D+EVL
Sbjct: 1301 LYRELICVPYMAKFVVFAKMNDPVESSLRCFCMTDDKVDKTLEQQENFEEVARSKDIEVL 1360

Query: 193  EGKSQFVEFAGNLVPVTKSGDQLRLGFRAFRENRLPFTVRVKDPHADVIGRTLFMREPKV 252
            EGK  +V+  GNL P+TK G QL   F +F+ENRLPF+++++D   +  GR  F++EPK 
Sbjct: 1361 EGKPIYVDCYGNLAPLTKGGQQLVFNFYSFKENRLPFSIKIRDTSQEPCGRLSFLKEPKT 1420

Query: 253  SKGEAPQQPICVSKGEAPQQPICVLNIVLP----------DDIIPETSLPESELT----- 297
            +KG              PQ  +C LNI LP          DD I +T   +S  +     
Sbjct: 1421 TKG-------------LPQTAVCNLNITLPAHKKETESDQDDEIEKTDRRQSFASLALRK 1467

Query: 298  RYQYLTDSSGTARAQWEDVTGTTPLTF 324
            RY YLT+     R+     T + P T+
Sbjct: 1468 RYSYLTEPGMIERSTG--ATRSLPTTY 1492




Membrane-cytoskeleton linker. May participate in the maintenance/targeting of ion channels and cell adhesion molecules at the nodes of Ranvier and axonal initial segments.
Homo sapiens (taxid: 9606)
>sp|Q8C8R3|ANK2_MOUSE Ankyrin-2 OS=Mus musculus GN=Ank2 PE=1 SV=2 Back     alignment and function description
>sp|Q01484|ANK2_HUMAN Ankyrin-2 OS=Homo sapiens GN=ANK2 PE=1 SV=4 Back     alignment and function description
>sp|G5E8K5|ANK3_MOUSE Ankyrin-3 OS=Mus musculus GN=Ank3 PE=1 SV=1 Back     alignment and function description
>sp|P16157|ANK1_HUMAN Ankyrin-1 OS=Homo sapiens GN=ANK1 PE=1 SV=3 Back     alignment and function description
>sp|Q02357|ANK1_MOUSE Ankyrin-1 OS=Mus musculus GN=Ank1 PE=1 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query417
242024511 1770 ankyrin-1, putative [Pediculus humanus c 0.762 0.179 0.714 1e-135
332022332 7686 Ankyrin-2 [Acromyrmex echinatior] 0.681 0.036 0.738 1e-133
307196554 5738 Ankyrin-2 [Harpegnathos saltator] 0.673 0.048 0.734 1e-133
383856810 5704 PREDICTED: uncharacterized protein LOC10 0.673 0.049 0.741 1e-132
328786387 6029 PREDICTED: hypothetical protein LOC40905 0.673 0.046 0.741 1e-131
307184783 4208 Ankyrin-2 [Camponotus floridanus] 0.681 0.067 0.741 1e-131
340713436 6672 PREDICTED: hypothetical protein LOC10064 0.673 0.042 0.738 1e-130
350425715 4893 PREDICTED: hypothetical protein LOC10074 0.673 0.057 0.738 1e-130
189235951 1719 PREDICTED: similar to ankyrin 2,3/unc44 0.800 0.194 0.639 1e-129
157129750 2439 ankyrin 2,3/unc44 [Aedes aegypti] gi|108 0.630 0.107 0.774 1e-129
>gi|242024511|ref|XP_002432671.1| ankyrin-1, putative [Pediculus humanus corporis] gi|212518141|gb|EEB19933.1| ankyrin-1, putative [Pediculus humanus corporis] Back     alignment and taxonomy information
 Score =  487 bits (1254), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 240/336 (71%), Positives = 271/336 (80%), Gaps = 18/336 (5%)

Query: 14   AQPIPTDITAKLLGNRVAVSPIVTIEPRRRKFHKPITLTIPVPQAANKGMINQYSGDAPT 73
            AQPIP ++TAKLLGNRVAVSPIVT+EPRRRKFHKPITLTIPVP+AANKGMIN YS DAPT
Sbjct: 1103 AQPIPAELTAKLLGNRVAVSPIVTVEPRRRKFHKPITLTIPVPRAANKGMINNYSSDAPT 1162

Query: 74   LRLLCSITGGTARAQWEDVTGTTPLTFVKDCVSFTTTVSARFWLMDCRNVQDSAKMATEL 133
            LRLLCSITGGT+RAQWEDVTG+TPLTFV DCVSFTTTVSARFWLMDCRNV ++ KMATEL
Sbjct: 1163 LRLLCSITGGTSRAQWEDVTGSTPLTFVNDCVSFTTTVSARFWLMDCRNVGEATKMATEL 1222

Query: 134  YREAIHVPFMAKFVVFAKRIEQLEARLRVFCMTDDKEDKTLEHQEHFTEVAKSRDVEVLE 193
            YREAIHVPFM+KFVVFAKR++ +EARLRVFCMTDDKEDKTLEHQE+FTEVAKSRDVEVLE
Sbjct: 1223 YREAIHVPFMSKFVVFAKRVDTMEARLRVFCMTDDKEDKTLEHQENFTEVAKSRDVEVLE 1282

Query: 194  GKSQFVEFAGNLVPVTKSGDQLRLGFRAFRENRLPFTVRVKDPHADVIGRTLFMREPKVS 253
            GK Q+VEFAGNLVPVTKSGDQL++GF+AFRENRLPFTVRVKDP  D IGR LFMRE K S
Sbjct: 1283 GKPQYVEFAGNLVPVTKSGDQLQIGFKAFRENRLPFTVRVKDPLVDSIGRLLFMREAKAS 1342

Query: 254  KGEAPQQPICVSKGEAPQQPICVLNIVLPDDIIPETSLPESELTRYQYLTDS--SGTARA 311
            KG+ PQQP C           C LNIVLP+ I+P+ SL E +L   Q    +  +G   A
Sbjct: 1343 KGDPPQQPTC-----------C-LNIVLPETIMPDLSLSEPDLIALQKKISAMKNGGIEA 1390

Query: 312  QWEDVTGTTPLTFVKDCVSFTTTVSARFWLMDCRNV 347
            Q  D+     L+ V + + +   V A    +D  +V
Sbjct: 1391 QRSDLR----LSDVSNLLGYDWIVLASHLNIDDSDV 1422




Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332022332|gb|EGI62644.1| Ankyrin-2 [Acromyrmex echinatior] Back     alignment and taxonomy information
>gi|307196554|gb|EFN78084.1| Ankyrin-2 [Harpegnathos saltator] Back     alignment and taxonomy information
>gi|383856810|ref|XP_003703900.1| PREDICTED: uncharacterized protein LOC100874737, partial [Megachile rotundata] Back     alignment and taxonomy information
>gi|328786387|ref|XP_392578.4| PREDICTED: hypothetical protein LOC409051 [Apis mellifera] Back     alignment and taxonomy information
>gi|307184783|gb|EFN71097.1| Ankyrin-2 [Camponotus floridanus] Back     alignment and taxonomy information
>gi|340713436|ref|XP_003395249.1| PREDICTED: hypothetical protein LOC100642686 [Bombus terrestris] Back     alignment and taxonomy information
>gi|350425715|ref|XP_003494210.1| PREDICTED: hypothetical protein LOC100742486, partial [Bombus impatiens] Back     alignment and taxonomy information
>gi|189235951|ref|XP_001809144.1| PREDICTED: similar to ankyrin 2,3/unc44 [Tribolium castaneum] Back     alignment and taxonomy information
>gi|157129750|ref|XP_001661747.1| ankyrin 2,3/unc44 [Aedes aegypti] gi|108872110|gb|EAT36335.1| AAEL011565-PA [Aedes aegypti] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query417
UNIPROTKB|A7Z090 1093 ANK3 "Uncharacterized protein" 0.743 0.283 0.533 3.1e-87
WB|WBGene00006780 6994 unc-44 [Caenorhabditis elegans 0.661 0.039 0.611 3.3e-87
UNIPROTKB|E9PCH6 1048 ANK2 "Ankyrin-2" [Homo sapiens 0.736 0.292 0.550 2.4e-85
UNIPROTKB|F1LY23 1039 Ank2 "Protein Ank2" [Rattus no 0.736 0.295 0.550 4.9e-85
UNIPROTKB|B1AQT2 1001 ANK3 "Ankyrin-3" [Homo sapiens 0.743 0.309 0.527 6.2e-85
UNIPROTKB|F1NG08 3694 Gga.53822 "Uncharacterized pro 0.597 0.067 0.648 1.2e-84
UNIPROTKB|H0Y931 966 ANK2 "Ankyrin-2" [Homo sapiens 0.671 0.289 0.576 1.3e-84
UNIPROTKB|F1M5N3 3838 Ank2 "Protein Ank2" [Rattus no 0.597 0.064 0.644 1.7e-84
UNIPROTKB|F1M9N9 3898 Ank2 "Protein Ank2" [Rattus no 0.597 0.063 0.644 1.8e-84
UNIPROTKB|F1LM42 3927 Ank2 "Protein Ank2" [Rattus no 0.597 0.063 0.644 1.8e-84
UNIPROTKB|A7Z090 ANK3 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
 Score = 854 (305.7 bits), Expect = 3.1e-87, Sum P(2) = 3.1e-87
 Identities = 177/332 (53%), Positives = 224/332 (67%)

Query:    14 AQPIPTDITAKLLGNRVAVSPIVTIEPRRRKFHKPITLTIPVPQAANKGMINQYSGDA-P 72
             AQP+P +I  K+LGN+   SPIVT+EPRRRKFHKPIT+TIPVP A+ +G+ N Y GD  P
Sbjct:   315 AQPVPDEIVKKILGNKATFSPIVTVEPRRRKFHKPITMTIPVPPASGEGVSNGYKGDTTP 374

Query:    73 TLRLLCSITGGTARAQWEDVTGTTPLTFVKDCVSFTTTVSARFWLMDCRNVQDSAKMATE 132
              LRLLCSITGGT+ AQWED+TGTTPLTF+KDCVSFTT VSARFWL DC  V ++  +AT+
Sbjct:   375 NLRLLCSITGGTSPAQWEDITGTTPLTFIKDCVSFTTNVSARFWLADCHQVLETVGLATQ 434

Query:   133 LYREAIHVPFMAKFVVFAKRIEQLEARLRVFCMTDDKEDKTLEHQEHFTEVAKSRDVEVL 192
             LYRE I VP+MAKFVVFAK  + +E+ LR FCMTDDK DKTLE QE+F EVA+S+D+EVL
Sbjct:   435 LYRELICVPYMAKFVVFAKMNDPVESSLRCFCMTDDKVDKTLEQQENFEEVARSKDIEVL 494

Query:   193 EGKSQFVEFAGNLVPVTKSGDQLRLGFRAFRENRLPFTVRVKDPHADVIGRTLFMREPKV 252
             EGK  +V+  GNL P+TK G QL   F AF+ENRLPF+++++D   +  GR  F++EPK 
Sbjct:   495 EGKPIYVDCYGNLAPLTKGGQQLVFNFYAFKENRLPFSIKIRDTSQEPCGRLSFLKEPKT 554

Query:   253 SKGEAPQQPICVSKGEAPQQPICVLNIVLPDDIIPE-TSLPESELT-----RYQYLTDSS 306
             +KG              PQ  +C LNI LP     E T   +S  +     RY YLT+  
Sbjct:   555 TKG-------------LPQTAVCNLNITLPAHKKTEKTDRRQSFASLALRKRYSYLTEPG 601

Query:   307 GTARAQWEDVTGTTPLTFVKDCVSFTTTVSAR 338
              + ++  E       +  V D +  + T  AR
Sbjct:   602 MSPQSPCERTD--IRMAIVADHLGLSWTELAR 631


GO:0007165 "signal transduction" evidence=IEA
WB|WBGene00006780 unc-44 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
UNIPROTKB|E9PCH6 ANK2 "Ankyrin-2" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|F1LY23 Ank2 "Protein Ank2" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|B1AQT2 ANK3 "Ankyrin-3" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|F1NG08 Gga.53822 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|H0Y931 ANK2 "Ankyrin-2" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|F1M5N3 Ank2 "Protein Ank2" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|F1M9N9 Ank2 "Protein Ank2" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|F1LM42 Ank2 "Protein Ank2" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q8C8R3ANK2_MOUSENo assigned EC number0.61710.61390.0656yesN/A
Q12955ANK3_HUMANNo assigned EC number0.53510.70980.0676yesN/A

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 417
KOG4177|consensus1143 100.0
KOG4177|consensus1143 99.79
PF00791103 ZU5: ZU5 domain; InterPro: IPR000906 This is a dom 92.99
smart00218104 ZU5 Domain present in ZO-1 and Unc5-like netrin re 91.56
>KOG4177|consensus Back     alignment and domain information
Probab=100.00  E-value=1.3e-50  Score=449.96  Aligned_cols=233  Identities=63%  Similarity=0.993  Sum_probs=226.5

Q ss_pred             eeEEEEEecCHHHHHHHcCCCceecceEEeecCCCCCCCCeEEEccCCCCCCCCCccCCCCCCCceeEeecccCCCccCc
Q psy2358           9 CGKWIAQPIPTDITAKLLGNRVAVSPIVTIEPRRRKFHKPITLTIPVPQAANKGMINQYSGDAPTLRLLCSITGGTARAQ   88 (417)
Q Consensus         9 ~V~LQaqpv~~~lv~~l~g~~~~~SPlvtvePrrrkFhkPItl~lPlPp~~~k~~~~~~~~~~~~LrLLcsi~Ggt~~a~   88 (417)
                      -++||+|||+.++++++.||+.++|||+++|||++|||+||++.+ .|+.+     +.+++++++||||||++||+.+|+
T Consensus       903 r~~~~~~~~~~~~~~~~~~~~~~~~~i~~~e~r~~~~~~~~~l~~-~~~~~-----~~~~~~t~~l~ll~~~~~~~~~a~  976 (1143)
T KOG4177|consen  903 RVSLQAQPVPLEVVTKLLGNKATFSPIVTVEPRRRKFHKPITLRI-APGSN-----NAYSGDTPTLRLLCSITGGVAPAQ  976 (1143)
T ss_pred             HHHHhcccccHHHHHHhcCCcccccceeeecchHHHhhhhhhhcc-ccccC-----cccCCCCchhhhhhcccCCcCcch
Confidence            467899999999999999999999999999999999999999999 88777     578888999999999999999999


Q ss_pred             cccccCceeeeEecCeEEEEeeeeeeEEEecCCchhhHHHHHHHHHHhhcccceeeEEEEEEecCCccceEEEEEeeCCc
Q psy2358          89 WEDVTGTTPLTFVKDCVSFTTTVSARFWLMDCRNVQDSAKMATELYREAIHVPFMAKFVVFAKRIEQLEARLRVFCMTDD  168 (417)
Q Consensus        89 WeDITg~t~l~~~~~~vsFtttvsaRfwL~~c~~~~~~~~~a~~Ly~e~~~vp~ma~fVvf~k~~dp~e~~L~~~C~tdd  168 (417)
                      |+|+||.+.+.+.|+|+||++++++|||++||+++.|...+++++|.|++++ ||++|++|+|+++|.++.++|||||||
T Consensus       977 ~~~~t~~~h~~~~~~~~~f~~~~~~r~~~~~~~~~~e~~~~~~~~~~e~~~~-~~~~~~~f~~~~~~~~~~~~~~~~~~~ 1055 (1143)
T KOG4177|consen  977 WEDITGTTHLTFANDCGSFTTNVSARFWLVDCRKTREAVTHATQLYNELIFV-YMAKFVVFAKSNFPNEGRLRCFCMTDD 1055 (1143)
T ss_pred             hhcccceeecccccccceeehhhhhHhhhhhcchhhhhhhHHHHHHHHHHHH-HHHHHhhhccCCcchhhccccccccCC
Confidence            9999999999999999999999999999999999999999999999999999 999999999999999999999999999


Q ss_pred             ccccccccccCccccccCCceeeecCceEEEEeecCcccccCCCceEEEEEEecccccceEEEEEcCCCCCceeEEEEee
Q psy2358         169 KEDKTLEHQEHFTEVAKSRDVEVLEGKSQFVEFAGNLVPVTKSGDQLRLGFRAFRENRLPFTVRVKDPHADVIGRTLFMR  248 (417)
Q Consensus       169 k~dktLe~qe~f~~~a~S~~vevlEG~~~~~ef~GNlvP~~k~g~ql~f~F~sfreNrL~~~Vkv~D~~~~~~G~vsF~r  248 (417)
                      |+++||+++++|.+.++|+|++|++|+..|++++||++|..+.|+|+.|.|.+|+||||.|+++.+    +. |++||++
T Consensus      1056 ~~~~~~~~~~~f~~~~~~~d~~v~~~~~~~~~~~~n~~p~~~~~~ql~~~~~~~~~~~l~~~~~~~----~~-g~~~~~~ 1130 (1143)
T KOG4177|consen 1056 KVDKTLEQQEYFAEVARSRDIEVLGGKGGFAEPSGNDVPLTKAGQQLSFCFVPFLENRLAFSVKKR----HA-GRISFMA 1130 (1143)
T ss_pred             ccCcchhhHHHHHHhhhhhhhhhhccccceecccCccccceeccceeEEeeehhhhhhhHHHHHhh----cC-Ccceeec
Confidence            999999999999999999999999999999999999999999999999999999999999999999    22 9999999


Q ss_pred             ccccC
Q psy2358         249 EPKVS  253 (417)
Q Consensus       249 ~pk~~  253 (417)
                      +|+.+
T Consensus      1131 ~~~~~ 1135 (1143)
T KOG4177|consen 1131 EPKSK 1135 (1143)
T ss_pred             ccccc
Confidence            99877



>KOG4177|consensus Back     alignment and domain information
>PF00791 ZU5: ZU5 domain; InterPro: IPR000906 This is a domain of unknown function, present in ZO-1 and Unc5-like netrin receptors Back     alignment and domain information
>smart00218 ZU5 Domain present in ZO-1 and Unc5-like netrin receptors Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query417
4d8o_A581 Crystal Structure Of The Ankyrin-B Zu5-Zu5-Upa-Dd T 2e-90
4d8o_A 581 Crystal Structure Of The Ankyrin-B Zu5-Zu5-Upa-Dd T 6e-43
3ud1_A326 Crystal Structure Of Zu5a-Zu5b Domains Of Human Ery 3e-36
3ud1_A326 Crystal Structure Of Zu5a-Zu5b Domains Of Human Ery 6e-13
3ud2_C326 Crystal Structure Of Selenomethionine Zu5a-Zu5b Pro 4e-36
3ud2_C326 Crystal Structure Of Selenomethionine Zu5a-Zu5b Pro 6e-13
>pdb|4D8O|A Chain A, Crystal Structure Of The Ankyrin-B Zu5-Zu5-Upa-Dd Tandem Length = 581 Back     alignment and structure

Iteration: 1

Score = 329 bits (844), Expect = 2e-90, Method: Compositional matrix adjust. Identities = 165/269 (61%), Positives = 197/269 (73%), Gaps = 22/269 (8%) Query: 14 AQPIPTDITAKLLGNRVAVSPIVTIEPRRRKFHKPITLTIPVPQAANKGMINQYSGDAPT 73 AQP+ +++ K+LGN+ SPIVT+EPRRRKFHKPIT+TIPVP+A SGDAPT Sbjct: 220 AQPMHSELVKKILGNKATFSPIVTLEPRRRKFHKPITMTIPVPKA---------SGDAPT 270 Query: 74 LRLLCSITGGTARAQWEDVTGTTPLTFVKDCVSFTTTVSARFWLMDCRNVQDSAKMATEL 133 LRLLCSITGGT AQWED+TGTTPLTFV +CVSFTT VSARFWL+DCR +Q+S A+++ Sbjct: 271 LRLLCSITGGTTPAQWEDITGTTPLTFVNECVSFTTNVSARFWLIDCRQIQESVTFASQV 330 Query: 134 YREAIHVPFMAKFVVFAKRIEQLEARLRVFCMTDDKEDKTLEHQEHFTEVAKSRDVEVLE 193 YRE I VP+MAKFVVFAK + +EARLR FCMTDDK DKTLE QE+F EVA+SRDVEVLE Sbjct: 331 YREIICVPYMAKFVVFAKSHDPIEARLRCFCMTDDKVDKTLEQQENFAEVARSRDVEVLE 390 Query: 194 GKSQFVEFAGNLVPVTKSGDQLRLGFRAFRENRLPFTVRVKDPHADVIGRTLFMREPKVS 253 GK +V+ GNLVP+TKSG F AF+ENRLP V+V+D + GR FM+EPK + Sbjct: 391 GKPIYVDCFGNLVPLTKSGQHHIFSFFAFKENRLPLFVKVRDTTQEPCGRLSFMKEPKST 450 Query: 254 KGEAPQQPICVSKGEAPQQPICVLNIVLP 282 +G Q IC LNI LP Sbjct: 451 RGLV-------------HQAICNLNITLP 466
>pdb|4D8O|A Chain A, Crystal Structure Of The Ankyrin-B Zu5-Zu5-Upa-Dd Tandem Length = 581 Back     alignment and structure
>pdb|3UD1|A Chain A, Crystal Structure Of Zu5a-Zu5b Domains Of Human Erythrocyte Ankyrin Length = 326 Back     alignment and structure
>pdb|3UD1|A Chain A, Crystal Structure Of Zu5a-Zu5b Domains Of Human Erythrocyte Ankyrin Length = 326 Back     alignment and structure
>pdb|3UD2|C Chain C, Crystal Structure Of Selenomethionine Zu5a-Zu5b Protein Domains Of Human Erythrocyte Ankyrin Length = 326 Back     alignment and structure
>pdb|3UD2|C Chain C, Crystal Structure Of Selenomethionine Zu5a-Zu5b Protein Domains Of Human Erythrocyte Ankyrin Length = 326 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query417
4d8o_A581 Ankyrin-2; ZU5, UPA, death domain, supramodule, pr 2e-86
4d8o_A 581 Ankyrin-2; ZU5, UPA, death domain, supramodule, pr 2e-34
3ud1_A326 Ankyrin-1; beta sandwich, ZU5, adapter protein, sp 2e-51
3ud1_A326 Ankyrin-1; beta sandwich, ZU5, adapter protein, sp 6e-19
3g5b_A405 Netrin receptor UNC5B; ZU5, death domain, UPA, apo 4e-11
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 6e-07
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-05
>4d8o_A Ankyrin-2; ZU5, UPA, death domain, supramodule, protein binding; 2.20A {Homo sapiens} Length = 581 Back     alignment and structure
 Score =  273 bits (698), Expect = 2e-86
 Identities = 166/281 (59%), Positives = 198/281 (70%), Gaps = 22/281 (7%)

Query: 14  AQPIPTDITAKLLGNRVAVSPIVTIEPRRRKFHKPITLTIPVPQAANKGMINQYSGDAPT 73
           AQP+ +++  K+LGN+   SPIVT+EPRRRKFHKPIT+TIPVP+          SGDAPT
Sbjct: 220 AQPMHSELVKKILGNKATFSPIVTLEPRRRKFHKPITMTIPVPK---------ASGDAPT 270

Query: 74  LRLLCSITGGTARAQWEDVTGTTPLTFVKDCVSFTTTVSARFWLMDCRNVQDSAKMATEL 133
           LRLLCSITGGT  AQWED+TGTTPLTFV +CVSFTT VSARFWL+DCR +Q+S   A+++
Sbjct: 271 LRLLCSITGGTTPAQWEDITGTTPLTFVNECVSFTTNVSARFWLIDCRQIQESVTFASQV 330

Query: 134 YREAIHVPFMAKFVVFAKRIEQLEARLRVFCMTDDKEDKTLEHQEHFTEVAKSRDVEVLE 193
           YRE I VP+MAKFVVFAK  + +EARLR FCMTDDK DKTLE QE+F EVA+SRDVEVLE
Sbjct: 331 YREIICVPYMAKFVVFAKSHDPIEARLRCFCMTDDKVDKTLEQQENFAEVARSRDVEVLE 390

Query: 194 GKSQFVEFAGNLVPVTKSGDQLRLGFRAFRENRLPFTVRVKDPHADVIGRTLFMREPKVS 253
           GK  +V+  GNLVP+TKSG      F AF+ENRLP  V+V+D   +  GR  FM+EPK +
Sbjct: 391 GKPIYVDCFGNLVPLTKSGQHHIFSFFAFKENRLPLFVKVRDTTQEPCGRLSFMKEPKST 450

Query: 254 KGEAPQQPICVSKGEAPQQPICVLNIVLPDDIIPETSLPES 294
           +G                Q IC LNI LP       S  E 
Sbjct: 451 RGL-------------VHQAICNLNITLPIYTKESESDQEQ 478


>4d8o_A Ankyrin-2; ZU5, UPA, death domain, supramodule, protein binding; 2.20A {Homo sapiens} Length = 581 Back     alignment and structure
>3ud1_A Ankyrin-1; beta sandwich, ZU5, adapter protein, spectrin binding, cytos protein binding; 2.00A {Homo sapiens} PDB: 3ud2_C Length = 326 Back     alignment and structure
>3ud1_A Ankyrin-1; beta sandwich, ZU5, adapter protein, spectrin binding, cytos protein binding; 2.00A {Homo sapiens} PDB: 3ud2_C Length = 326 Back     alignment and structure
>3g5b_A Netrin receptor UNC5B; ZU5, death domain, UPA, apoptosis, developmental protein, glycoprotein, immunoglobulin domain, membrane, phosphoprotein; 2.00A {Rattus norvegicus} Length = 405 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query417
4d8o_A581 Ankyrin-2; ZU5, UPA, death domain, supramodule, pr 100.0
3ud1_A326 Ankyrin-1; beta sandwich, ZU5, adapter protein, sp 100.0
4d8o_A 581 Ankyrin-2; ZU5, UPA, death domain, supramodule, pr 100.0
3ud1_A326 Ankyrin-1; beta sandwich, ZU5, adapter protein, sp 99.79
3g5b_A405 Netrin receptor UNC5B; ZU5, death domain, UPA, apo 96.73
2kxr_A118 Tight junction protein ZO-1; beta-barrel, protein 91.75
2kxs_A146 Tight junction protein ZO-1, linker, peptide of M 88.93
3f59_A161 Ankyrin-1; beta sandwich, ZU5, spectrin binding, a 85.04
>4d8o_A Ankyrin-2; ZU5, UPA, death domain, supramodule, protein binding; 2.20A {Homo sapiens} Back     alignment and structure
Probab=100.00  E-value=7e-95  Score=762.43  Aligned_cols=264  Identities=63%  Similarity=1.005  Sum_probs=242.9

Q ss_pred             ceeeEEEEEecCHHHHHHHcCCCceecceEEeecCCCCCCCCeEEEccCCCCCCCCCccCCCCCCCceeEeecccCCCcc
Q psy2358           7 LTCGKWIAQPIPTDITAKLLGNRVAVSPIVTIEPRRRKFHKPITLTIPVPQAANKGMINQYSGDAPTLRLLCSITGGTAR   86 (417)
Q Consensus         7 ~~~V~LQaqpv~~~lv~~l~g~~~~~SPlvtvePrrrkFhkPItl~lPlPp~~~k~~~~~~~~~~~~LrLLcsi~Ggt~~   86 (417)
                      -..|+|||||||++++++|+|+++++|||||+||||+||||||||+|||||++         +|+++|||||||+||+++
T Consensus       213 ~~~v~lqvqpV~~~~v~~l~~~~~~~Spivt~ep~~~~F~kPvtv~lP~P~~~---------gd~~~lrLL~s~~gg~~~  283 (581)
T 4d8o_A          213 RIRVGLQAQPMHSELVKKILGNKATFSPIVTLEPRRRKFHKPITMTIPVPKAS---------GDAPTLRLLCSITGGTTP  283 (581)
T ss_dssp             CEEEEEEEECCCHHHHHHHHTTSEEECCEEEEESSSCEEEEEEEEEEECCTTC---------CSCTTEEEEEECCCTTSC
T ss_pred             ceEEEEEEEecCHHHHHHhhcCCCccCceEEEecCcccccCCeeEEeeCCCCC---------CCCCceEEEeecCCCCCc
Confidence            35799999999999999999999999999999999999999999999999977         478999999999999999


Q ss_pred             CccccccCceeeeEecCeEEEEeeeeeeEEEecCCchhhHHHHHHHHHHhhcccceeeEEEEEEecCCccceEEEEEeeC
Q psy2358          87 AQWEDVTGTTPLTFVKDCVSFTTTVSARFWLMDCRNVQDSAKMATELYREAIHVPFMAKFVVFAKRIEQLEARLRVFCMT  166 (417)
Q Consensus        87 a~WeDITg~t~l~~~~~~vsFtttvsaRfwL~~c~~~~~~~~~a~~Ly~e~~~vp~ma~fVvf~k~~dp~e~~L~~~C~t  166 (417)
                      |+||||||+|+++++|+|||||||||||||||||+++.++++||++||+|+++||||||||||+|+.||+|++|||||||
T Consensus       284 a~WeDIT~~~~l~~~~~~vsFtttvsarfwL~~c~~~~~~~~~a~~ly~~l~~v~~~~~fvvf~k~~dp~e~~lr~~C~~  363 (581)
T 4d8o_A          284 AQWEDITGTTPLTFVNECVSFTTNVSARFWLIDCRQIQESVTFASQVYREIICVPYMAKFVVFAKSHDPIEARLRCFCMT  363 (581)
T ss_dssp             CCCEECGGGSCCEEETTEEEEEEEECCEEEEEEESCGGGHHHHHHHHHHHHTSCEEEEEEEEEEECCSSSEEEEEEEEEC
T ss_pred             ccccccCCceeEEEecceEEEEEeeeeeEEEEcCCCchhhHHHHHHHHHHhhccceeEEEEEEEccCCCchheEEEEEec
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CcccccccccccCccccccCCceeeecCceEEEEeecCcccccCCCceEEEEEEecccccceEEEEEcCCCCCceeEEEE
Q psy2358         167 DDKEDKTLEHQEHFTEVAKSRDVEVLEGKSQFVEFAGNLVPVTKSGDQLRLGFRAFRENRLPFTVRVKDPHADVIGRTLF  246 (417)
Q Consensus       167 ddk~dktLe~qe~f~~~a~S~~vevlEG~~~~~ef~GNlvP~~k~g~ql~f~F~sfreNrL~~~Vkv~D~~~~~~G~vsF  246 (417)
                      |||+|||||+||+|.++|||++|||+||+|||++|+|||+|++|+|+|++|+||+||||||+|+|||+|.+++++|+|+|
T Consensus       364 ~dk~d~tLe~~e~f~~~a~S~~vevlEG~~~~~~f~Gnl~P~~k~g~~~~f~F~~~~enrl~~~Vkv~d~~~~~~g~v~F  443 (581)
T 4d8o_A          364 DDKVDKTLEQQENFAEVARSRDVEVLEGKPIYVDCFGNLVPLTKSGQHHIFSFFAFKENRLPLFVKVRDTTQEPCGRLSF  443 (581)
T ss_dssp             CCSCSCGGGSCTTCEEEEECCCEEEETTCEEEEEEEESEEECC---CCEEEECCTTSCCEEEEEEEESCTTSCSEEEEEE
T ss_pred             CcchhhhhhhhhccCccCCCCCeEEecCceEEEEecCCcccccccCceEEEEEEeeecceeeEEEEecCCCCCccEEEEE
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eeccccCCCCCCCCCccccCCCCCCCceEEEEeecCCCCCCCCCCc
Q psy2358         247 MREPKVSKGEAPQQPICVSKGEAPQQPICVLNIVLPDDIIPETSLP  292 (417)
Q Consensus       247 ~r~pk~~~~~~~~~~~~~~k~~~~q~plC~L~ItLP~~~k~~~~d~  292 (417)
                      ||+||..++.             +|+|||+|||+||++++....++
T Consensus       444 ~r~~r~~~g~-------------~~~~lc~L~i~lP~~~~~~~~~~  476 (581)
T 4d8o_A          444 MKEPKSTRGL-------------VHQAICNLNITLPIYTKESESDQ  476 (581)
T ss_dssp             ESCC--------------------CCCSEEEEEECCCCC-------
T ss_pred             ecccccCCCC-------------CCCceeecccccCccccCCcccc
Confidence            9999987654             48999999999999998765543



>3ud1_A Ankyrin-1; beta sandwich, ZU5, adapter protein, spectrin binding, cytos protein binding; 2.00A {Homo sapiens} PDB: 3ud2_C Back     alignment and structure
>4d8o_A Ankyrin-2; ZU5, UPA, death domain, supramodule, protein binding; 2.20A {Homo sapiens} Back     alignment and structure
>3ud1_A Ankyrin-1; beta sandwich, ZU5, adapter protein, spectrin binding, cytos protein binding; 2.00A {Homo sapiens} PDB: 3ud2_C Back     alignment and structure
>3g5b_A Netrin receptor UNC5B; ZU5, death domain, UPA, apoptosis, developmental protein, glycoprotein, immunoglobulin domain, membrane, phosphoprotein; 2.00A {Rattus norvegicus} Back     alignment and structure
>2kxr_A Tight junction protein ZO-1; beta-barrel, protein binding; NMR {Homo sapiens} Back     alignment and structure
>2kxs_A Tight junction protein ZO-1, linker, peptide of M enriched ZO-associated protein; beta-barrel, protein binding; NMR {Homo sapiens} Back     alignment and structure
>3f59_A Ankyrin-1; beta sandwich, ZU5, spectrin binding, alternative P usage, ANK repeat, cytoskeleton, disease mutation; 2.00A {Homo sapiens} PDB: 3kbt_C 3kbu_C Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00