Psyllid ID: psy2488

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140--
Protein Sequence
EDWYLGKRSIKTPLKILNREGKNKTSKQQFVKFWFGTGGAGYCISRALALKMLPIASGGKFISICEKIRLPDDCTMGYIIEHRLQRPMTVIEEFHSHLEPMKFLHQDKFSQQVTFSYMQYAKDVVNRLNIESFDTSVDPTRG
Secondary Structure (PSIPRED)
ccEEEcccccccccEEEccccccccccccEEEEEEccccEEEEEcHHHHHHHccccccccHHHHHHHccccccccHHHHHHHHccccccccccccccccccccccccccccEEEEEccccccccccEEEccccccccccccc
Secondary Structure Prediction (SSPRO)
ccEEEccccccccEEEEEcccccccccccEEEEEEEcccccHHHcHHHHHHcccHccccccHHHHHHcccccccHHHHHHHHHcccccccccHHHHHHHHHHHccHHHHHcEEEEEcccccccccEEEEccccccccccccc
Coil and Loop (DISEMBL)
edwylgkrsiktPLKILNregknktsKQQFVKFwfgtggagyCISRALALKmlpiasggkfisicekirlpddctmgYIIEHRLQRPMTVIEEFHShlepmkflhqdkfsqQVTFSYMQYAKDVVNRLniesfdtsvdptrg
Flexible Loop (DISEMBL)
edwylgkrsiktplkilnregknktskQQFVKFWFGTGGAGYCISRALALKMLPIASGGKFISICEKIRLPDDCTMGYIIEHRLQRPMTVIEEFHSHLEPMKFLHQDKFSQQVTFSYMQYAKDVVNrlniesfdtsvdptrg
Low Complexity Region (SEG)
EDWYLGKRSIKTPLKILNREGKNKTSKQQFVKFWFGTGGAGYCISRALALKMLPIASGGKFISICEKIRLPDDCTMGYIIEHRLQRPMTVIEEFHSHLEPMKFLHQDKFSQQVTFSYMQYAKDVVNRLNIESFDTSVDPTRG
Disordered region (IsUnstruct)
***************I***********QQFVKFWFGTGGAGYCISRALALKMLPIASGGKFISICEKIRLPDDCTMGYIIEHRLQRPMTVIEEFHSHLEPMKFLHQDKFSQQVTFSYMQYAKDVVNRLNIE***********
Disordered Region (DISOPRED)
EDWYLGKRSIKTPLKILN********KQQFVKFWFGTGGAGYCISRALALKMLPIAS**KFISICEKIRLPDDCTMGYIIEHRLQRPMTVIEEFHSHLEPMKFLHQDKFSQQVTFSYMQYAKDVVNRLNIESFDT***P***
Disordered Region (DISEMBL)
EDWYLGKRSIKTPLKILNREGKNKTSKQQFVKFWFGTGGAGYCISRALALKMLPIASGGKFISICEKIRLPDDCTMGYIIEHRLQRPMTVIEEFHSHLEPMKFLHQDKFSQQVTFSYMQYAKDVVNRLNIESFDTSVDPTRG
Disordered Region (DISPRO)
EDWYLGKRSIKTPLKILNREGKNKTSKQQFVKFWFGTGGAGYCISRALALKMLPIASGGKFISICEKIRLPDDCTMGYIIEHRLQRPMTVIEEFHSHLEPMKFLHQDKFSQQVTFSYMQYAKDVVNRLNIESFD********
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
EDWYLGKRSIKTPLKILNREGKNKTSKQQFVKFWFGTGGAGYCISRALALKMLPIASGGKFISICEKIRLPDDCTMGYIIEHRLQRPMTVIEEFHSHLEPMKFLHQDKFSQQVTFSYMQYAKDVVNRLNIESFDTSVDPTRG
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	142	2.2.26 [Sep-21-2011]
Q24342	412	Fringe glycosyltransferas	yes	N/A	0.964	0.332	0.585	1e-43
Q8JHF2	374	Beta-1,3-N-acetylglucosam	yes	N/A	0.964	0.366	0.471	7e-30
Q2KJ92	380	Beta-1,3-N-acetylglucosam	yes	N/A	0.964	0.360	0.471	7e-30
Q6KFX9	362	Beta-1,3-N-acetylglucosam	no	N/A	0.943	0.370	0.496	9e-30
Q8NES3	379	Beta-1,3-N-acetylglucosam	yes	N/A	0.957	0.358	0.453	1e-28
O09010	378	Beta-1,3-N-acetylglucosam	yes	N/A	0.964	0.362	0.457	3e-28
Q924T4	378	Beta-1,3-N-acetylglucosam	yes	N/A	0.964	0.362	0.450	5e-28
O12971	363	Beta-1,3-N-acetylglucosam	yes	N/A	0.964	0.377	0.464	8e-28
P79948	375	Beta-1,3-N-acetylglucosam	N/A	N/A	0.964	0.365	0.464	1e-27
O09009	332	Beta-1,3-N-acetylglucosam	no	N/A	0.964	0.412	0.475	2e-27

>sp|Q24342|FNG_DROME Fringe glycosyltransferase OS=Drosophila melanogaster GN=fng PE=1 SV=1

 Score =  174 bits (442), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 82/140 (58%), Positives = 106/140 (75%), Gaps = 3/140 (2%)

Query: 2   DWYLGKRSIKTPLKILNREGKNKTSKQQFVKFWFGTGGAGYCISRALALKMLPIASGGKF 61
           DWYLGK SI +PL+I + + KN T+ ++ + FWF TGGAG+C+SRAL LKMLPIA GGKF
Sbjct: 258 DWYLGKPSISSPLEI-HLDSKNTTTNKK-ITFWFATGGAGFCLSRALTLKMLPIAGGGKF 315

Query: 62  ISICEKIRLPDDCTMGYIIEHRLQRPMTVIEEFHSHLEPMKFLHQDKFSQQVTFSYMQYA 121
           ISI +KIR PDD TMG+IIEH L+ P+TV++ FHSHLEPM+F+ QD F  QV+FSY  + 
Sbjct: 316 ISIGDKIRFPDDVTMGFIIEHLLKVPLTVVDNFHSHLEPMEFIRQDTFQDQVSFSY-AHM 374

Query: 122 KDVVNRLNIESFDTSVDPTR 141
           K+  N + ++ FD   DP R
Sbjct: 375 KNQWNVIKVDGFDMKTDPKR 394

Glycosyltransferase involved in the elongation of O-linked ligands to activate Notch signaling. Possesses fucose-specific beta-1,3-N-acetylglucosaminyltransferase activity; extends the O-linked fucose on the Notch EGF repeats. Boundary-specific cell-signaling molecule that is responsible for dorsal-ventral cell interactions during wing development.
Drosophila melanogaster (taxid: 7227)
EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: 2EC: 2EC: 2

>sp|Q8JHF2|LFNG_DANRE Beta-1,3-N-acetylglucosaminyltransferase lunatic fringe OS=Danio rerio GN=lfng PE=2 SV=2

 Score =  129 bits (323), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 67/142 (47%), Positives = 93/142 (65%), Gaps = 5/142 (3%)

Query: 1   EDWYLGKRSIKTPLKILNREGKNKTSKQQFVKFWFGTGGAGYCISRALALKMLPIASGGK 60
           +D Y+GK S+  P++   R G NK    + V FWF TGGAG+CISR LALKM P ASGG 
Sbjct: 216 QDMYIGKPSLDRPIEATERLGDNK---MRPVNFWFATGGAGFCISRGLALKMSPWASGGH 272

Query: 61  FISICEKIRLPDDCTMGYIIEHRLQRPMTVIEEFHSHLEPMKFLHQDKFSQQVTFSYMQY 120
           F++  EKIRLPDDCT+GYIIE  L   +T    FHSHLE ++ + + +  +Q+T SY  +
Sbjct: 273 FMNTAEKIRLPDDCTIGYIIESVLGVSLTRSSLFHSHLENLQQVSKSEVHKQITLSYGMF 332

Query: 121 AKDVVNRLNIE-SFDTSVDPTR 141
            ++  N +N++ +F    DP+R
Sbjct: 333 -ENKRNIINMKGAFSVEEDPSR 353

Glycosyltransferase that initiates the elongation of O-linked fucose residues attached to EGF-like repeats in the extracellular domain of Notch molecules (By similarity). Involved in the correct formation of boundaries in the somites and hindbrain. Required for Delta-Notch-mediated induction of hypochord cells at the lateral borders of the midline precursor domain.

Danio rerio (taxid: 7955)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 2

EC: 2

EC: 2

>sp|Q2KJ92|LFNG_BOVIN Beta-1,3-N-acetylglucosaminyltransferase lunatic fringe OS=Bos taurus GN=LFNG PE=2 SV=1

 Score =  129 bits (323), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 67/142 (47%), Positives = 90/142 (63%), Gaps = 5/142 (3%)

Query: 1   EDWYLGKRSIKTPLKILNREGKNKTSKQQFVKFWFGTGGAGYCISRALALKMLPIASGGK 60
           +D YLGK S+  P++   R  +NK      V FWF TGGAG+CISR LALKM P ASGG 
Sbjct: 222 QDVYLGKPSLDRPIQATERVSENKVRP---VHFWFATGGAGFCISRGLALKMSPWASGGH 278

Query: 61  FISICEKIRLPDDCTMGYIIEHRLQRPMTVIEEFHSHLEPMKFLHQDKFSQQVTFSYMQY 120
           F+S  E+IRLPDDCT+GYI+E  L  P+     FHSHLE ++ +   +  +QVT SY  +
Sbjct: 279 FMSTAERIRLPDDCTIGYIVEALLGVPLVRCGLFHSHLENLQQVPASELHEQVTLSYGMF 338

Query: 121 AKDVVNRLNIES-FDTSVDPTR 141
            ++  N ++I+  F    DP+R
Sbjct: 339 -ENKRNSVHIKGPFSVEADPSR 359

Glycosyltransferase that initiates the elongation of O-linked fucose residues attached to EGF-like repeats in the extracellular domain of Notch molecules. Decreases the binding of JAGGED1 to NOTCH2 but not that of DELTA1. Essential mediator of somite segmentation and patterning.

Bos taurus (taxid: 9913)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 2

EC: 2

EC: 2

>sp|Q6KFX9|RFNG_DANRE Beta-1,3-N-acetylglucosaminyltransferase radical fringe OS=Danio rerio GN=rfng PE=2 SV=1

 Score =  128 bits (322), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 72/145 (49%), Positives = 90/145 (62%), Gaps = 11/145 (7%)

Query: 1   EDWYLGKRSIKTPLKILNREGKNKTSKQQFVKFWFGTGGAGYCISRALALKMLPIASGGK 60
           +D YLG+ S+  P++   R    K+     VKFWF TGGAG+CISR LALKM P AS G 
Sbjct: 204 QDVYLGRPSLDHPIEAAERV---KSDGSVSVKFWFATGGAGFCISRGLALKMSPWASLGN 260

Query: 61  FISICEKIRLPDDCTMGYIIEHRLQRPMTVIEEFHSHLEPMKFLHQDKFSQQVTFSYMQY 120
           FI+  EKIRLPDDCT+GYIIE  L+ P+T    FHSHLE ++ L  +   +QVT SY  +
Sbjct: 261 FITTAEKIRLPDDCTIGYIIEALLEVPLTHTGLFHSHLENLQRLPAENILRQVTLSYGGF 320

Query: 121 AKDVVNRLNIES----FDTSVDPTR 141
                NR N+ S    F  + DPTR
Sbjct: 321 E----NRRNVVSVGGAFSLAEDPTR 341

Glycosyltransferase that initiates the elongation of O-linked fucose residues attached to EGF-like repeats in the extracellular domain of Notch molecules (By similarity). Regulates neurogenesis in the hindbrain; involved in boundary cell specification via Notch-mediated activation of wnt1 expression.

Danio rerio (taxid: 7955)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 2

EC: 2

EC: 2

>sp|Q8NES3|LFNG_HUMAN Beta-1,3-N-acetylglucosaminyltransferase lunatic fringe OS=Homo sapiens GN=LFNG PE=1 SV=2

 Score =  125 bits (313), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 64/141 (45%), Positives = 90/141 (63%), Gaps = 5/141 (3%)

Query: 2   DWYLGKRSIKTPLKILNREGKNKTSKQQFVKFWFGTGGAGYCISRALALKMLPIASGGKF 61
           D Y+GK S+  P++ + R  +NK      V FWF TGGAG+CISR LALKM P ASGG F
Sbjct: 222 DVYVGKPSLDRPIQAMERVSENKVRP---VHFWFATGGAGFCISRGLALKMSPWASGGHF 278

Query: 62  ISICEKIRLPDDCTMGYIIEHRLQRPMTVIEEFHSHLEPMKFLHQDKFSQQVTFSYMQYA 121
           ++  E+IRLPDDCT+GYI+E  L  P+     FHSHLE ++ +   +  +QVT SY  + 
Sbjct: 279 MNTAERIRLPDDCTIGYIVEALLGVPLIRSGLFHSHLENLQQVPTSELHEQVTLSYGMF- 337

Query: 122 KDVVNRLNIES-FDTSVDPTR 141
           ++  N ++++  F    DP+R
Sbjct: 338 ENKRNAVHVKGPFSVEADPSR 358

Glycosyltransferase that initiates the elongation of O-linked fucose residues attached to EGF-like repeats in the extracellular domain of Notch molecules. Decreases the binding of JAGGED1 to NOTCH2 but not that of DELTA1. Essential mediator of somite segmentation and patterning.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 2

EC: 2

EC: 2

>sp|O09010|LFNG_MOUSE Beta-1,3-N-acetylglucosaminyltransferase lunatic fringe OS=Mus musculus GN=Lfng PE=1 SV=1

 Score =  124 bits (310), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 65/142 (45%), Positives = 90/142 (63%), Gaps = 5/142 (3%)

Query: 1   EDWYLGKRSIKTPLKILNREGKNKTSKQQFVKFWFGTGGAGYCISRALALKMLPIASGGK 60
           +D Y+GK S+  P++   R  ++K      V FWF TGGAG+CISR LALKM P ASGG 
Sbjct: 220 QDVYIGKPSLDRPIQATERISEHKVRP---VHFWFATGGAGFCISRGLALKMGPWASGGH 276

Query: 61  FISICEKIRLPDDCTMGYIIEHRLQRPMTVIEEFHSHLEPMKFLHQDKFSQQVTFSYMQY 120
           F+S  E+IRLPDDCT+GYI+E  L  P+     FHSHLE ++ +   +  +QVT SY  +
Sbjct: 277 FMSTAERIRLPDDCTIGYIVEALLGVPLIRSGLFHSHLENLQQVPTTELHEQVTLSYGMF 336

Query: 121 AKDVVNRLNIES-FDTSVDPTR 141
            ++  N ++I+  F    DP+R
Sbjct: 337 -ENKRNAVHIKGPFSVEADPSR 357

Glycosyltransferase that initiates the elongation of O-linked fucose residues attached to EGF-like repeats in the extracellular domain of Notch molecules inhibiting Jagged mediated Notch signaling. Essential mediator of somite segmentation and patterning. During somite boundary formation, it restricts Notch activity in the presomitic mesoderm to a boundary-formig territory in the posterior half of the prospective somite. In this region, Notch function activates a set of genes that are involved in boundary formation and in anterior-posterior somite identity. Ectopically expressed in the thymus, Lfgn inhibits Notch signaling which results in inhibition of T-cell commitment and promotes B-cell development in lymphoid progenitors. May play a role in boundary formation of the enamel knot.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 2

EC: 2

EC: 2

>sp|Q924T4|LFNG_RAT Beta-1,3-N-acetylglucosaminyltransferase lunatic fringe OS=Rattus norvegicus GN=Lfng PE=2 SV=1

 Score =  122 bits (307), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 64/142 (45%), Positives = 90/142 (63%), Gaps = 5/142 (3%)

Query: 1   EDWYLGKRSIKTPLKILNREGKNKTSKQQFVKFWFGTGGAGYCISRALALKMLPIASGGK 60
           +D Y+GK S+  P++   R  +++      V FWF TGGAG+CISR LALKM P ASGG 
Sbjct: 220 QDVYIGKPSLDRPIQATERISEHRVRP---VHFWFATGGAGFCISRGLALKMGPWASGGH 276

Query: 61  FISICEKIRLPDDCTMGYIIEHRLQRPMTVIEEFHSHLEPMKFLHQDKFSQQVTFSYMQY 120
           F+S  E+IRLPDDCT+GYI+E  L  P+     FHSHLE ++ +   +  +QVT SY  +
Sbjct: 277 FMSTAERIRLPDDCTIGYIVEALLGVPLIRSGLFHSHLENLQQVPTTELHEQVTLSYGMF 336

Query: 121 AKDVVNRLNIES-FDTSVDPTR 141
            ++  N ++I+  F    DP+R
Sbjct: 337 -ENKRNAVHIKGPFSVEADPSR 357

Glycosyltransferase that initiates the elongation of O-linked fucose residues attached to EGF-like repeats in the extracellular domain of Notch molecules inhibiting Jagged mediated Notch signaling. Essential mediator of somite segmentation and patterning.

Rattus norvegicus (taxid: 10116)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 2

EC: 2

EC: 2

>sp|O12971|LFNG_CHICK Beta-1,3-N-acetylglucosaminyltransferase lunatic fringe OS=Gallus gallus GN=LFNG PE=2 SV=1

 Score =  122 bits (305), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 66/142 (46%), Positives = 90/142 (63%), Gaps = 5/142 (3%)

Query: 1   EDWYLGKRSIKTPLKILNREGKNKTSKQQFVKFWFGTGGAGYCISRALALKMLPIASGGK 60
           +D Y+GK S+  P++   R  +NK      V FWF TGGAG+CISR LALKM P ASGG 
Sbjct: 205 QDIYIGKPSLDRPIQATERISENKMHP---VHFWFATGGAGFCISRGLALKMSPWASGGH 261

Query: 61  FISICEKIRLPDDCTMGYIIEHRLQRPMTVIEEFHSHLEPMKFLHQDKFSQQVTFSYMQY 120
           F+S  EKIRLPDDCT+GYIIE  L   +     FHSHLE +  + + +  +QVT SY  +
Sbjct: 262 FMSTAEKIRLPDDCTIGYIIESVLGVKLIRSNLFHSHLENLHQVPKTEIHKQVTLSYGMF 321

Query: 121 AKDVVNRLNIE-SFDTSVDPTR 141
            ++  N ++++ +F    DP+R
Sbjct: 322 -ENKRNSIHMKGAFSVEEDPSR 342

Glycosyltransferase that initiates the elongation of O-linked fucose residues attached to EGF-like repeats in the extracellular domain of Notch molecules. Essential mediator of somite segmentation and patterning.

Gallus gallus (taxid: 9031)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 2

EC: 2

EC: 2

>sp|P79948|LFNG_XENLA Beta-1,3-N-acetylglucosaminyltransferase lunatic fringe OS=Xenopus laevis GN=lfng PE=2 SV=1

 Score =  121 bits (304), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 65/140 (46%), Positives = 82/140 (58%), Gaps = 3/140 (2%)

Query: 2   DWYLGKRSIKTPLKILNREGKNKTSKQQFVKFWFGTGGAGYCISRALALKMLPIASGGKF 61
           D Y+GK S+  P++   R  +   S  + V FWF TGGAG+CISR LALKM P ASGG F
Sbjct: 218 DIYIGKPSLDRPIQATERISE---SNMRPVNFWFATGGAGFCISRGLALKMSPWASGGHF 274

Query: 62  ISICEKIRLPDDCTMGYIIEHRLQRPMTVIEEFHSHLEPMKFLHQDKFSQQVTFSYMQYA 121
           ++  EKIRLPDDCT+GYIIE  L   +     FHSHLE +  + Q +   QVT SY  + 
Sbjct: 275 MNTAEKIRLPDDCTIGYIIESVLGVKLIRSNLFHSHLENLHQVPQSEIHNQVTLSYGMFE 334

Query: 122 KDVVNRLNIESFDTSVDPTR 141
                 L   +F    DP+R
Sbjct: 335 NKRNAILMKGAFSVEEDPSR 354

Glycosyltransferase that initiates the elongation of O-linked fucose residues attached to EGF-like repeats in the extracellular domain of Notch molecules. Essential mediator of somite segmentation and patterning (By similarity). May be involved in mesoderm development.

Xenopus laevis (taxid: 8355)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 2

EC: 2

EC: 2

>sp|O09009|RFNG_MOUSE Beta-1,3-N-acetylglucosaminyltransferase radical fringe OS=Mus musculus GN=Rfng PE=2 SV=1

 Score =  120 bits (301), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 68/143 (47%), Positives = 86/143 (60%), Gaps = 6/143 (4%)

Query: 1   EDWYLGKRSIKTPLKILNREGKNKTSKQQFVKFWFGTGGAGYCISRALALKMLPIASGGK 60
           +D YLG+ S+  P++   R     TS    VKFWF TGGAG+C+SR LALKM P AS G 
Sbjct: 168 QDIYLGRPSLDHPIEATERVQGGGTSNT--VKFWFATGGAGFCLSRGLALKMSPWASLGS 225

Query: 61  FISICEKIRLPDDCTMGYIIEHRLQRPMTVIEEFHSHLEPMKFLHQDKFSQQVTFSY--M 118
           F+S  E++RLPDDCT+GYI+E  L   +     FHSHLE ++ L      QQVT SY   
Sbjct: 226 FMSTAERVRLPDDCTVGYIVEGLLGARLLHSPLFHSHLENLQRLPSGAILQQVTLSYGGP 285

Query: 119 QYAKDVVNRLNIESFDTSVDPTR 141
           +   +VVN     SF+   DPTR
Sbjct: 286 ENPHNVVNVAG--SFNIQQDPTR 306

Glycosyltransferase that initiates the elongation of O-linked fucose residues attached to EGF-like repeats in the extracellular domain of Notch molecules. May be involved in limb formation and in neurogenesis.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 2

EC: 2

EC: 2

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	142
6573138	213	Fringe [Schistocerca gregaria]	0.957	0.638	0.659	1e-49
242003612	357	Fringe glycosyltransferase, putative [Pe	0.957	0.380	0.595	5e-46
307202836	332	Fringe glycosyltransferase [Harpegnathos	0.985	0.421	0.617	3e-45
380015712	412	PREDICTED: fringe glycosyltransferase-li	0.985	0.339	0.602	3e-45
328787052	412	PREDICTED: fringe glycosyltransferase [A	0.985	0.339	0.602	3e-45
189241261	431	PREDICTED: similar to fringe CG10580-PA	0.971	0.320	0.624	6e-45
427781215	411	Putative fringe glycosyltransferase [Rhi	0.964	0.333	0.624	1e-44
270013211	347	hypothetical protein TcasGA2_TC011785 [T	0.957	0.391	0.624	1e-44
340721222	413	PREDICTED: fringe glycosyltransferase-li	0.985	0.338	0.595	1e-44
241594063	194	beta-1,3-N-acetylglucosaminyltransferase	0.964	0.706	0.638	2e-44

>gi|6573138|gb|AAF17565.1|AF201829_1 Fringe [Schistocerca gregaria]

 Score =  200 bits (509), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 93/141 (65%), Positives = 112/141 (79%), Gaps = 5/141 (3%)

Query: 1   EDWYLGKRSIKTPLKILNREGKNKTSKQQFVKFWFGTGGAGYCISRALALKMLPIASGGK 60
           +DWYLGK SI+ PL+ILNR+     +  Q + FWF TGGAG+C+SRALALKM+P+ASGGK
Sbjct: 61  QDWYLGKPSIRAPLEILNRD-----NTAQKISFWFATGGAGFCLSRALALKMMPVASGGK 115

Query: 61  FISICEKIRLPDDCTMGYIIEHRLQRPMTVIEEFHSHLEPMKFLHQDKFSQQVTFSYMQY 120
           FISI EKIRLPDD TMGYIIEH LQ+P+TVIE+FHSHLEPMKFL  D    Q+TFSY  Y
Sbjct: 116 FISIGEKIRLPDDVTMGYIIEHMLQKPLTVIEQFHSHLEPMKFLRPDTIQDQITFSYSHY 175

Query: 121 AKDVVNRLNIESFDTSVDPTR 141
           +KD +N + I+ FD  +DPTR
Sbjct: 176 SKDEMNVVKIDGFDKRIDPTR 196

Source: Schistocerca gregaria

Species: Schistocerca gregaria

Genus: Schistocerca

Family: Acrididae

Order: Orthoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242003612|ref|XP_002422797.1| Fringe glycosyltransferase, putative [Pediculus humanus corporis] gi|212505655|gb|EEB10059.1| Fringe glycosyltransferase, putative [Pediculus humanus corporis]

 Score =  188 bits (478), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 84/141 (59%), Positives = 111/141 (78%), Gaps = 5/141 (3%)

Query: 1   EDWYLGKRSIKTPLKILNREGKNKTSKQQFVKFWFGTGGAGYCISRALALKMLPIASGGK 60
           +DWYLGK SI+ PL+I+ ++  ++      + FWF TGGAG+C+SRALALKM+P+ASGGK
Sbjct: 205 QDWYLGKPSIRAPLEIITKDVNSRK-----ISFWFATGGAGFCLSRALALKMMPVASGGK 259

Query: 61  FISICEKIRLPDDCTMGYIIEHRLQRPMTVIEEFHSHLEPMKFLHQDKFSQQVTFSYMQY 120
           FIS+ EKIRLPDD TMGYIIEH L++ +TV+E+FHSHLEPMKFL ++    Q++FSY +Y
Sbjct: 260 FISVGEKIRLPDDVTMGYIIEHLLRKHLTVVEQFHSHLEPMKFLRRNSLQDQISFSYSRY 319

Query: 121 AKDVVNRLNIESFDTSVDPTR 141
            KD +N + IE FD  +DPTR
Sbjct: 320 GKDDLNVVKIEGFDYKIDPTR 340

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307202836|gb|EFN82096.1| Fringe glycosyltransferase [Harpegnathos saltator]

 Score =  186 bits (472), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 87/141 (61%), Positives = 111/141 (78%), Gaps = 1/141 (0%)

Query: 1   EDWYLGKRSIKTPLKILNREGKNKTSKQQFVKFWFGTGGAGYCISRALALKMLPIASGGK 60
           EDWYLGK SI +PL+I+ R+G     + Q VKFWF TGGAG+CISRALALKM P+A GGK
Sbjct: 193 EDWYLGKPSIPSPLEIV-RQGPEPQRRPQKVKFWFATGGAGFCISRALALKMTPVAGGGK 251

Query: 61  FISICEKIRLPDDCTMGYIIEHRLQRPMTVIEEFHSHLEPMKFLHQDKFSQQVTFSYMQY 120
           FI++ +KIRLPDD TMGYIIE+ L++ +TV+E+FHSHLEPMKFL++D F +QV+FSY + 
Sbjct: 252 FITVGDKIRLPDDVTMGYIIEYLLKKNLTVVEQFHSHLEPMKFLNKDTFHEQVSFSYSKG 311

Query: 121 AKDVVNRLNIESFDTSVDPTR 141
           ++D  N L I+ FD   DP R
Sbjct: 312 SRDEWNILKIDGFDLKDDPKR 332

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380015712|ref|XP_003691840.1| PREDICTED: fringe glycosyltransferase-like isoform 1 [Apis florea]

 Score =  186 bits (472), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 85/141 (60%), Positives = 110/141 (78%), Gaps = 1/141 (0%)

Query: 1   EDWYLGKRSIKTPLKILNREGKNKTSKQQFVKFWFGTGGAGYCISRALALKMLPIASGGK 60
           EDWYLG+ SI  PL+I+ R+G   + + Q VKFWF TGGAG+CISRALA+KM P+A GGK
Sbjct: 255 EDWYLGRPSIPAPLEII-RQGPEPSKRPQKVKFWFATGGAGFCISRALAMKMTPVAGGGK 313

Query: 61  FISICEKIRLPDDCTMGYIIEHRLQRPMTVIEEFHSHLEPMKFLHQDKFSQQVTFSYMQY 120
           FI++ ++IRLPDD TMGYIIEH L++ +TV+E+FHSHLEPMKFL++D F +QV+FSY + 
Sbjct: 314 FITVGDRIRLPDDVTMGYIIEHLLKKQLTVVEQFHSHLEPMKFLNKDTFDEQVSFSYSKG 373

Query: 121 AKDVVNRLNIESFDTSVDPTR 141
            +D  N L I+ FD   DP R
Sbjct: 374 PRDEWNILKIDGFDMKDDPKR 394

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328787052|ref|XP_623898.3| PREDICTED: fringe glycosyltransferase [Apis mellifera]

 Score =  186 bits (471), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 85/141 (60%), Positives = 110/141 (78%), Gaps = 1/141 (0%)

Query: 1   EDWYLGKRSIKTPLKILNREGKNKTSKQQFVKFWFGTGGAGYCISRALALKMLPIASGGK 60
           EDWYLG+ SI  PL+I+ R+G   + + Q VKFWF TGGAG+CISRALA+KM P+A GGK
Sbjct: 255 EDWYLGRPSIPAPLEII-RQGPEPSKRPQKVKFWFATGGAGFCISRALAMKMTPVAGGGK 313

Query: 61  FISICEKIRLPDDCTMGYIIEHRLQRPMTVIEEFHSHLEPMKFLHQDKFSQQVTFSYMQY 120
           FI++ ++IRLPDD TMGYIIEH L++ +TV+E+FHSHLEPMKFL++D F +QV+FSY + 
Sbjct: 314 FITVGDRIRLPDDVTMGYIIEHLLKKQLTVVEQFHSHLEPMKFLNKDTFDEQVSFSYSKG 373

Query: 121 AKDVVNRLNIESFDTSVDPTR 141
            +D  N L I+ FD   DP R
Sbjct: 374 PRDEWNILKIDGFDMKDDPKR 394

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|189241261|ref|XP_001814382.1| PREDICTED: similar to fringe CG10580-PA [Tribolium castaneum]

 Score =  185 bits (469), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 88/141 (62%), Positives = 111/141 (78%), Gaps = 3/141 (2%)

Query: 1   EDWYLGKRSIKTPLKILNREGKNKTSKQQFVKFWFGTGGAGYCISRALALKMLPIASGGK 60
           EDWYLGK SI+ PL+I+N+E   K +  Q VKFWF TGGAG+C+SRALALKM+P+ASGGK
Sbjct: 277 EDWYLGKPSIQAPLEIINKE--KKPTVNQKVKFWFATGGAGFCLSRALALKMMPVASGGK 334

Query: 61  FISICEKIRLPDDCTMGYIIEHRLQRPMTVIEEFHSHLEPMKFLHQDKFSQQVTFSYMQY 120
           FIS  EKIRLPDD TMGYIIEH L++P+TV+++FHSHLEPMKF+ ++   +Q++FSY + 
Sbjct: 335 FISTGEKIRLPDDVTMGYIIEHLLKKPLTVVDQFHSHLEPMKFIRREILEEQISFSYSR- 393

Query: 121 AKDVVNRLNIESFDTSVDPTR 141
            KD  N + IE FDT  D  R
Sbjct: 394 NKDEWNVVKIEGFDTKYDTNR 414

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|427781215|gb|JAA56059.1| Putative fringe glycosyltransferase [Rhipicephalus pulchellus]

 Score =  184 bits (467), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 88/141 (62%), Positives = 109/141 (77%), Gaps = 4/141 (2%)

Query: 1   EDWYLGKRSIKTPLKILNREGKNKTSKQQFVKFWFGTGGAGYCISRALALKMLPIASGGK 60
           EDWYLGK SI+ PL+IL R+    +  Q+ + FWF TGGAG+CISR+LALKMLP+A  GK
Sbjct: 258 EDWYLGKPSIRQPLEILARDS---SKPQRKISFWFATGGAGFCISRSLALKMLPLAGRGK 314

Query: 61  FISICEKIRLPDDCTMGYIIEHRLQRPMTVIEEFHSHLEPMKFLHQDKFSQQVTFSYMQY 120
           FISI E IRLPDD TMGYI+EH L++ +TV+E FHSHLEPMKFL ++  S QVTFSY ++
Sbjct: 315 FISIGEHIRLPDDVTMGYIVEHLLKKNLTVVENFHSHLEPMKFLKKEGLSDQVTFSYSKF 374

Query: 121 AKDVVNRLNIESFDTSVDPTR 141
            K+ +N LNI+ F   VDPTR
Sbjct: 375 GKE-LNVLNIDGFSQRVDPTR 394

Source: Rhipicephalus pulchellus

Species: Rhipicephalus pulchellus

Genus: Rhipicephalus

Family: Ixodidae

Order: Ixodida

Class: Arachnida

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|270013211|gb|EFA09659.1| hypothetical protein TcasGA2_TC011785 [Tribolium castaneum]

 Score =  184 bits (467), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 88/141 (62%), Positives = 110/141 (78%), Gaps = 5/141 (3%)

Query: 1   EDWYLGKRSIKTPLKILNREGKNKTSKQQFVKFWFGTGGAGYCISRALALKMLPIASGGK 60
           EDWYLGK SI+ PL+I+N+E K      Q VKFWF TGGAG+C+SRALALKM+P+ASGGK
Sbjct: 195 EDWYLGKPSIQAPLEIINKEKK----PTQKVKFWFATGGAGFCLSRALALKMMPVASGGK 250

Query: 61  FISICEKIRLPDDCTMGYIIEHRLQRPMTVIEEFHSHLEPMKFLHQDKFSQQVTFSYMQY 120
           FIS  EKIRLPDD TMGYIIEH L++P+TV+++FHSHLEPMKF+ ++   +Q++FSY + 
Sbjct: 251 FISTGEKIRLPDDVTMGYIIEHLLKKPLTVVDQFHSHLEPMKFIRREILEEQISFSYSR- 309

Query: 121 AKDVVNRLNIESFDTSVDPTR 141
            KD  N + IE FDT  D  R
Sbjct: 310 NKDEWNVVKIEGFDTKYDTNR 330

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340721222|ref|XP_003399023.1| PREDICTED: fringe glycosyltransferase-like [Bombus terrestris] gi|350406869|ref|XP_003487909.1| PREDICTED: fringe glycosyltransferase-like [Bombus impatiens]

 Score =  184 bits (466), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 84/141 (59%), Positives = 110/141 (78%), Gaps = 1/141 (0%)

Query: 1   EDWYLGKRSIKTPLKILNREGKNKTSKQQFVKFWFGTGGAGYCISRALALKMLPIASGGK 60
           EDWYLG+ SI  PL+I+ R+G   + + Q VKFWF TGGAG+CISRALA+KM P+A GGK
Sbjct: 256 EDWYLGRPSIPAPLEII-RQGPEPSKRPQKVKFWFATGGAGFCISRALAMKMTPVAGGGK 314

Query: 61  FISICEKIRLPDDCTMGYIIEHRLQRPMTVIEEFHSHLEPMKFLHQDKFSQQVTFSYMQY 120
           FI++ ++IRLPDD TMGYIIE+ L++ +TV+E+FHSHLEPMKFL++D F +QV+FSY + 
Sbjct: 315 FITVGDRIRLPDDVTMGYIIEYLLKKQLTVVEQFHSHLEPMKFLNKDTFGEQVSFSYSKG 374

Query: 121 AKDVVNRLNIESFDTSVDPTR 141
            +D  N L I+ FD   DP R
Sbjct: 375 PRDEWNILKIDGFDMKDDPKR 395

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|241594063|ref|XP_002404236.1| beta-1,3-N-acetylglucosaminyltransferase radical fringe, putative [Ixodes scapularis] gi|215502308|gb|EEC11802.1| beta-1,3-N-acetylglucosaminyltransferase radical fringe, putative [Ixodes scapularis]

 Score =  183 bits (465), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 90/141 (63%), Positives = 109/141 (77%), Gaps = 4/141 (2%)

Query: 1   EDWYLGKRSIKTPLKILNREGKNKTSKQQFVKFWFGTGGAGYCISRALALKMLPIASGGK 60
           EDWYLGK SI+ PL+IL R+     S  Q + FWF TGGAG+CISR+LALKMLPIA GGK
Sbjct: 41  EDWYLGKPSIRQPLEILARDS---GSPPQKISFWFATGGAGFCISRSLALKMLPIAGGGK 97

Query: 61  FISICEKIRLPDDCTMGYIIEHRLQRPMTVIEEFHSHLEPMKFLHQDKFSQQVTFSYMQY 120
           FISI E IRLPDD TMGYI+EH L++ +TV+E FHSHLEPMKFL ++  S QVTFSY ++
Sbjct: 98  FISIGEHIRLPDDVTMGYIVEHLLKKKLTVVENFHSHLEPMKFLKKEALSDQVTFSYSRF 157

Query: 121 AKDVVNRLNIESFDTSVDPTR 141
            K+ +N L+I+ F   VDPTR
Sbjct: 158 GKE-MNVLSIDGFPYRVDPTR 177

Source: Ixodes scapularis

Species: Ixodes scapularis

Genus: Ixodes

Family: Ixodidae

Order: Ixodida

Class: Arachnida

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	142
FB|FBgn0011591	412	fng "fringe" [Drosophila melan	0.964	0.332	0.585	3.6e-41
ZFIN|ZDB-GENE-980605-16	374	lfng "lunatic fringe homolog"	0.964	0.366	0.471	1.5e-28
UNIPROTKB|Q2KJ92	380	LFNG "Beta-1,3-N-acetylglucosa	0.964	0.360	0.471	2.4e-28
ZFIN|ZDB-GENE-030131-5418	362	rfng "RFNG O-fucosylpeptide 3-	0.943	0.370	0.496	6.4e-28
UNIPROTKB|Q8NES3	379	LFNG "Beta-1,3-N-acetylglucosa	0.957	0.358	0.453	1.7e-27
UNIPROTKB|F1RI57	376	LFNG "Uncharacterized protein"	0.964	0.364	0.464	1.7e-27
UNIPROTKB|F1NRR8	214	LFNG "Beta-1,3-N-acetylglucosa	0.964	0.640	0.464	5.7e-27
UNIPROTKB|F1NZ16	300	LFNG "Beta-1,3-N-acetylglucosa	0.964	0.456	0.464	5.7e-27
UNIPROTKB|O12971	363	LFNG "Beta-1,3-N-acetylglucosa	0.964	0.377	0.464	5.7e-27
MGI|MGI:1095413	378	Lfng "LFNG O-fucosylpeptide 3-	0.964	0.362	0.457	5.7e-27

FB|FBgn0011591 fng "fringe" [Drosophila melanogaster (taxid:7227)]

 Score = 437 (158.9 bits), Expect = 3.6e-41, P = 3.6e-41
 Identities = 82/140 (58%), Positives = 106/140 (75%)

Query:     2 DWYLGKRSIKTPLKILNREGKNKTSKQQFVKFWFGTGGAGYCISRALALKMLPIASGGKF 61
             DWYLGK SI +PL+I + + KN T+ ++ + FWF TGGAG+C+SRAL LKMLPIA GGKF
Sbjct:   258 DWYLGKPSISSPLEI-HLDSKNTTTNKK-ITFWFATGGAGFCLSRALTLKMLPIAGGGKF 315

Query:    62 ISICEKIRLPDDCTMGYIIEHRLQRPMTVIEEFHSHLEPMKFLHQDKFSQQVTFSYMQYA 121
             ISI +KIR PDD TMG+IIEH L+ P+TV++ FHSHLEPM+F+ QD F  QV+FSY  + 
Sbjct:   316 ISIGDKIRFPDDVTMGFIIEHLLKVPLTVVDNFHSHLEPMEFIRQDTFQDQVSFSYA-HM 374

Query:   122 KDVVNRLNIESFDTSVDPTR 141
             K+  N + ++ FD   DP R
Sbjct:   375 KNQWNVIKVDGFDMKTDPKR 394

GO:0007476 "imaginal disc-derived wing morphogenesis" evidence=IDA;IMP

GO:0008587 "imaginal disc-derived wing margin morphogenesis" evidence=IMP

GO:0007450 "dorsal/ventral pattern formation, imaginal disc" evidence=IDA

GO:0048749 "compound eye development" evidence=IDA

GO:0036011 "imaginal disc-derived leg segmentation" evidence=IMP

GO:0008375 "acetylglucosaminyltransferase activity" evidence=IDA;NAS;TAS

GO:0045747 "positive regulation of Notch signaling pathway" evidence=NAS

GO:0016021 "integral to membrane" evidence=NAS

GO:0005794 "Golgi apparatus" evidence=IDA;NAS;TAS

GO:0007219 "Notch signaling pathway" evidence=IDA;TAS

GO:0008194 "UDP-glycosyltransferase activity" evidence=IDA

GO:0006004 "fucose metabolic process" evidence=IMP;IDA

GO:0007293 "germarium-derived egg chamber formation" evidence=IMP

GO:0008593 "regulation of Notch signaling pathway" evidence=IDA;NAS;IMP;TAS

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0005795 "Golgi stack" evidence=IDA

GO:0007451 "dorsal/ventral lineage restriction, imaginal disc" evidence=TAS

GO:0045746 "negative regulation of Notch signaling pathway" evidence=NAS

GO:0001708 "cell fate specification" evidence=NAS

GO:0048477 "oogenesis" evidence=TAS

GO:0001745 "compound eye morphogenesis" evidence=IMP

GO:0030173 "integral to Golgi membrane" evidence=IEA

GO:0035017 "cuticle pattern formation" evidence=IMP

GO:0048190 "wing disc dorsal/ventral pattern formation" evidence=IGI

GO:0033829 "O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase activity" evidence=IDA

GO:0006493 "protein O-linked glycosylation" evidence=IMP

GO:0005797 "Golgi medial cisterna" evidence=IDA

ZFIN|ZDB-GENE-980605-16 lfng "lunatic fringe homolog" [Danio rerio (taxid:7955)]

 Score = 318 (117.0 bits), Expect = 1.5e-28, P = 1.5e-28
 Identities = 67/142 (47%), Positives = 92/142 (64%)

Query:     1 EDWYLGKRSIKTPLKILNREGKNKTSKQQFVKFWFGTGGAGYCISRALALKMLPIASGGK 60
             +D Y+GK S+  P++   R G NK      V FWF TGGAG+CISR LALKM P ASGG 
Sbjct:   216 QDMYIGKPSLDRPIEATERLGDNKMRP---VNFWFATGGAGFCISRGLALKMSPWASGGH 272

Query:    61 FISICEKIRLPDDCTMGYIIEHRLQRPMTVIEEFHSHLEPMKFLHQDKFSQQVTFSYMQY 120
             F++  EKIRLPDDCT+GYIIE  L   +T    FHSHLE ++ + + +  +Q+T SY  +
Sbjct:   273 FMNTAEKIRLPDDCTIGYIIESVLGVSLTRSSLFHSHLENLQQVSKSEVHKQITLSYGMF 332

Query:   121 AKDVVNRLNIE-SFDTSVDPTR 141
              ++  N +N++ +F    DP+R
Sbjct:   333 -ENKRNIINMKGAFSVEEDPSR 353

GO:0030173 "integral to Golgi membrane" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0033829 "O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase activity" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=IEA

GO:0007389 "pattern specification process" evidence=IEA

GO:0055016 "hypochord development" evidence=IMP

GO:0045665 "negative regulation of neuron differentiation" evidence=IMP

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0007399 "nervous system development" evidence=IEA

GO:0030154 "cell differentiation" evidence=IEA

GO:0007219 "Notch signaling pathway" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|Q2KJ92 LFNG "Beta-1,3-N-acetylglucosaminyltransferase lunatic fringe" [Bos taurus (taxid:9913)]

 Score = 316 (116.3 bits), Expect = 2.4e-28, P = 2.4e-28
 Identities = 67/142 (47%), Positives = 90/142 (63%)

Query:     1 EDWYLGKRSIKTPLKILNREGKNKTSKQQFVKFWFGTGGAGYCISRALALKMLPIASGGK 60
             +D YLGK S+  P++   R  +NK      V FWF TGGAG+CISR LALKM P ASGG 
Sbjct:   222 QDVYLGKPSLDRPIQATERVSENKVRP---VHFWFATGGAGFCISRGLALKMSPWASGGH 278

Query:    61 FISICEKIRLPDDCTMGYIIEHRLQRPMTVIEEFHSHLEPMKFLHQDKFSQQVTFSYMQY 120
             F+S  E+IRLPDDCT+GYI+E  L  P+     FHSHLE ++ +   +  +QVT SY  +
Sbjct:   279 FMSTAERIRLPDDCTIGYIVEALLGVPLVRCGLFHSHLENLQQVPASELHEQVTLSYGMF 338

Query:   121 AKDVVNRLNIES-FDTSVDPTR 141
              ++  N ++I+  F    DP+R
Sbjct:   339 -ENKRNSVHIKGPFSVEADPSR 359

GO:0045747 "positive regulation of Notch signaling pathway" evidence=IEA

GO:0032092 "positive regulation of protein binding" evidence=IEA

GO:0007386 "compartment pattern specification" evidence=IEA

GO:0007143 "female meiosis" evidence=IEA

GO:0001541 "ovarian follicle development" evidence=IEA

GO:0033829 "O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase activity" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0030173 "integral to Golgi membrane" evidence=IEA

ZFIN|ZDB-GENE-030131-5418 rfng "RFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase" [Danio rerio (taxid:7955)]

 Score = 312 (114.9 bits), Expect = 6.4e-28, P = 6.4e-28
 Identities = 72/145 (49%), Positives = 90/145 (62%)

Query:     1 EDWYLGKRSIKTPLKILNREGKNKTSKQQFVKFWFGTGGAGYCISRALALKMLPIASGGK 60
             +D YLG+ S+  P++   R    K+     VKFWF TGGAG+CISR LALKM P AS G 
Sbjct:   204 QDVYLGRPSLDHPIEAAERV---KSDGSVSVKFWFATGGAGFCISRGLALKMSPWASLGN 260

Query:    61 FISICEKIRLPDDCTMGYIIEHRLQRPMTVIEEFHSHLEPMKFLHQDKFSQQVTFSYMQY 120
             FI+  EKIRLPDDCT+GYIIE  L+ P+T    FHSHLE ++ L  +   +QVT SY  +
Sbjct:   261 FITTAEKIRLPDDCTIGYIIEALLEVPLTHTGLFHSHLENLQRLPAENILRQVTLSYGGF 320

Query:   121 AKDVVNRLNIES----FDTSVDPTR 141
                  NR N+ S    F  + DPTR
Sbjct:   321 E----NRRNVVSVGGAFSLAEDPTR 341

GO:0030173 "integral to Golgi membrane" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0033829 "O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase activity" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=IEA

GO:0007389 "pattern specification process" evidence=IEA

GO:0035284 "brain segmentation" evidence=IMP

GO:0030902 "hindbrain development" evidence=IMP

GO:0021592 "fourth ventricle development" evidence=IMP

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0007399 "nervous system development" evidence=IEA

GO:0030154 "cell differentiation" evidence=IEA

GO:0007219 "Notch signaling pathway" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|Q8NES3 LFNG "Beta-1,3-N-acetylglucosaminyltransferase lunatic fringe" [Homo sapiens (taxid:9606)]

 Score = 308 (113.5 bits), Expect = 1.7e-27, P = 1.7e-27
 Identities = 64/141 (45%), Positives = 90/141 (63%)

Query:     2 DWYLGKRSIKTPLKILNREGKNKTSKQQFVKFWFGTGGAGYCISRALALKMLPIASGGKF 61
             D Y+GK S+  P++ + R  +NK      V FWF TGGAG+CISR LALKM P ASGG F
Sbjct:   222 DVYVGKPSLDRPIQAMERVSENKVRP---VHFWFATGGAGFCISRGLALKMSPWASGGHF 278

Query:    62 ISICEKIRLPDDCTMGYIIEHRLQRPMTVIEEFHSHLEPMKFLHQDKFSQQVTFSYMQYA 121
             ++  E+IRLPDDCT+GYI+E  L  P+     FHSHLE ++ +   +  +QVT SY  + 
Sbjct:   279 MNTAERIRLPDDCTIGYIVEALLGVPLIRSGLFHSHLENLQQVPTSELHEQVTLSYGMF- 337

Query:   122 KDVVNRLNIES-FDTSVDPTR 141
             ++  N ++++  F    DP+R
Sbjct:   338 ENKRNAVHVKGPFSVEADPSR 358

GO:0030173 "integral to Golgi membrane" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0033829 "O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase activity" evidence=IEA

GO:0001541 "ovarian follicle development" evidence=IEA

GO:0007143 "female meiosis" evidence=IEA

GO:0007386 "compartment pattern specification" evidence=IEA

GO:0032092 "positive regulation of protein binding" evidence=IEA

GO:0045747 "positive regulation of Notch signaling pathway" evidence=IEA

GO:0009887 "organ morphogenesis" evidence=NAS

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=NAS

GO:0007219 "Notch signaling pathway" evidence=TAS

UNIPROTKB|F1RI57 LFNG "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 308 (113.5 bits), Expect = 1.7e-27, P = 1.7e-27
 Identities = 66/142 (46%), Positives = 89/142 (62%)

Query:     1 EDWYLGKRSIKTPLKILNREGKNKTSKQQFVKFWFGTGGAGYCISRALALKMLPIASGGK 60
             +D YLGK S+  P++   R  + K      V FWF TGGAG+CISR LALKM P ASGG 
Sbjct:   218 QDIYLGKPSLDRPIQATERVSETKVRP---VHFWFATGGAGFCISRGLALKMSPWASGGH 274

Query:    61 FISICEKIRLPDDCTMGYIIEHRLQRPMTVIEEFHSHLEPMKFLHQDKFSQQVTFSYMQY 120
             F+S  E+IRLPDDCT+GYI+E  L  P+     FHSHLE ++ +   +  +QVT SY  +
Sbjct:   275 FMSTAERIRLPDDCTIGYIVEALLGVPLIRSGLFHSHLENLQQVPTSELHEQVTLSYGMF 334

Query:   121 AKDVVNRLNIES-FDTSVDPTR 141
              ++  N ++I+  F    DP+R
Sbjct:   335 -ENKRNAVHIKGPFSVEADPSR 355

GO:0045747 "positive regulation of Notch signaling pathway" evidence=IEA

GO:0032092 "positive regulation of protein binding" evidence=IEA

GO:0007386 "compartment pattern specification" evidence=IEA

GO:0007143 "female meiosis" evidence=IEA

GO:0001541 "ovarian follicle development" evidence=IEA

GO:0033829 "O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase activity" evidence=IEA

GO:0030173 "integral to Golgi membrane" evidence=IEA

UNIPROTKB|F1NRR8 LFNG "Beta-1,3-N-acetylglucosaminyltransferase lunatic fringe" [Gallus gallus (taxid:9031)]

 Score = 303 (111.7 bits), Expect = 5.7e-27, P = 5.7e-27
 Identities = 66/142 (46%), Positives = 90/142 (63%)

Query:     1 EDWYLGKRSIKTPLKILNREGKNKTSKQQFVKFWFGTGGAGYCISRALALKMLPIASGGK 60
             +D Y+GK S+  P++   R  +NK      V FWF TGGAG+CISR LALKM P ASGG 
Sbjct:    77 QDIYIGKPSLDRPIQATERISENKMHP---VHFWFATGGAGFCISRGLALKMSPWASGGH 133

Query:    61 FISICEKIRLPDDCTMGYIIEHRLQRPMTVIEEFHSHLEPMKFLHQDKFSQQVTFSYMQY 120
             F+S  EKIRLPDDCT+GYIIE  L   +     FHSHLE +  + + +  +QVT SY  +
Sbjct:   134 FMSTAEKIRLPDDCTIGYIIESVLGVKLIRSNLFHSHLENLHQVPKTEIHKQVTLSYGMF 193

Query:   121 AKDVVNRLNIE-SFDTSVDPTR 141
              ++  N ++++ +F    DP+R
Sbjct:   194 -ENKRNSIHMKGAFSVEEDPSR 214

GO:0016020 "membrane" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=IEA

GO:0001541 "ovarian follicle development" evidence=IEA

GO:0007143 "female meiosis" evidence=IEA

GO:0007386 "compartment pattern specification" evidence=IEA

GO:0032092 "positive regulation of protein binding" evidence=IEA

GO:0045747 "positive regulation of Notch signaling pathway" evidence=IEA

UNIPROTKB|F1NZ16 LFNG "Beta-1,3-N-acetylglucosaminyltransferase lunatic fringe" [Gallus gallus (taxid:9031)]

 Score = 303 (111.7 bits), Expect = 5.7e-27, P = 5.7e-27
 Identities = 66/142 (46%), Positives = 90/142 (63%)

Query:     1 EDWYLGKRSIKTPLKILNREGKNKTSKQQFVKFWFGTGGAGYCISRALALKMLPIASGGK 60
             +D Y+GK S+  P++   R  +NK      V FWF TGGAG+CISR LALKM P ASGG 
Sbjct:   163 QDIYIGKPSLDRPIQATERISENKMHP---VHFWFATGGAGFCISRGLALKMSPWASGGH 219

Query:    61 FISICEKIRLPDDCTMGYIIEHRLQRPMTVIEEFHSHLEPMKFLHQDKFSQQVTFSYMQY 120
             F+S  EKIRLPDDCT+GYIIE  L   +     FHSHLE +  + + +  +QVT SY  +
Sbjct:   220 FMSTAEKIRLPDDCTIGYIIESVLGVKLIRSNLFHSHLENLHQVPKTEIHKQVTLSYGMF 279

Query:   121 AKDVVNRLNIE-SFDTSVDPTR 141
              ++  N ++++ +F    DP+R
Sbjct:   280 -ENKRNSIHMKGAFSVEEDPSR 300

GO:0016020 "membrane" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=IEA

GO:0001541 "ovarian follicle development" evidence=IEA

GO:0007143 "female meiosis" evidence=IEA

GO:0007386 "compartment pattern specification" evidence=IEA

GO:0032092 "positive regulation of protein binding" evidence=IEA

GO:0045747 "positive regulation of Notch signaling pathway" evidence=IEA

UNIPROTKB|O12971 LFNG "Beta-1,3-N-acetylglucosaminyltransferase lunatic fringe" [Gallus gallus (taxid:9031)]

 Score = 303 (111.7 bits), Expect = 5.7e-27, P = 5.7e-27
 Identities = 66/142 (46%), Positives = 90/142 (63%)

Query:     1 EDWYLGKRSIKTPLKILNREGKNKTSKQQFVKFWFGTGGAGYCISRALALKMLPIASGGK 60
             +D Y+GK S+  P++   R  +NK      V FWF TGGAG+CISR LALKM P ASGG 
Sbjct:   205 QDIYIGKPSLDRPIQATERISENKMHP---VHFWFATGGAGFCISRGLALKMSPWASGGH 261

Query:    61 FISICEKIRLPDDCTMGYIIEHRLQRPMTVIEEFHSHLEPMKFLHQDKFSQQVTFSYMQY 120
             F+S  EKIRLPDDCT+GYIIE  L   +     FHSHLE +  + + +  +QVT SY  +
Sbjct:   262 FMSTAEKIRLPDDCTIGYIIESVLGVKLIRSNLFHSHLENLHQVPKTEIHKQVTLSYGMF 321

Query:   121 AKDVVNRLNIE-SFDTSVDPTR 141
              ++  N ++++ +F    DP+R
Sbjct:   322 -ENKRNSIHMKGAFSVEEDPSR 342

GO:0007389 "pattern specification process" evidence=IEA

GO:0030173 "integral to Golgi membrane" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0033829 "O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase activity" evidence=IEA

MGI|MGI:1095413 Lfng "LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase" [Mus musculus (taxid:10090)]

 Score = 303 (111.7 bits), Expect = 5.7e-27, P = 5.7e-27
 Identities = 65/142 (45%), Positives = 90/142 (63%)

Query:     1 EDWYLGKRSIKTPLKILNREGKNKTSKQQFVKFWFGTGGAGYCISRALALKMLPIASGGK 60
             +D Y+GK S+  P++   R  ++K      V FWF TGGAG+CISR LALKM P ASGG 
Sbjct:   220 QDVYIGKPSLDRPIQATERISEHKVRP---VHFWFATGGAGFCISRGLALKMGPWASGGH 276

Query:    61 FISICEKIRLPDDCTMGYIIEHRLQRPMTVIEEFHSHLEPMKFLHQDKFSQQVTFSYMQY 120
             F+S  E+IRLPDDCT+GYI+E  L  P+     FHSHLE ++ +   +  +QVT SY  +
Sbjct:   277 FMSTAERIRLPDDCTIGYIVEALLGVPLIRSGLFHSHLENLQQVPTTELHEQVTLSYGMF 336

Query:   121 AKDVVNRLNIES-FDTSVDPTR 141
              ++  N ++I+  F    DP+R
Sbjct:   337 -ENKRNAVHIKGPFSVEADPSR 357

GO:0001541 "ovarian follicle development" evidence=IMP

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0007143 "female meiosis" evidence=IMP

GO:0007275 "multicellular organismal development" evidence=IEA

GO:0007386 "compartment pattern specification" evidence=IMP

GO:0007389 "pattern specification process" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=IEA

GO:0030173 "integral to Golgi membrane" evidence=IEA

GO:0032092 "positive regulation of protein binding" evidence=IDA

GO:0033829 "O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase activity" evidence=IEA

GO:0045747 "positive regulation of Notch signaling pathway" evidence=IDA

GO:0046872 "metal ion binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q24342	FNG_DROME	2, ., 4, ., 1, ., 2, 2, 2	0.5857	0.9647	0.3325	yes	N/A

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	2.4.1	LOW CONFIDENCE prediction!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	142
pfam02434	248	pfam02434, Fringe, Fringe-like	3e-58

>gnl|CDD|190308 pfam02434, Fringe, Fringe-like

 Score =  180 bits (459), Expect = 3e-58
 Identities = 71/145 (48%), Positives = 92/145 (63%), Gaps = 13/145 (8%)

Query: 1   EDWYLGKRSIKTPLKILNREGKNKTSKQQFVKFWFGTGGAGYCISRALALKMLPIASGGK 60
           +D YLGK S+  P++   R   N+      V FWF TGGAG+CISR LALKM P ASGG+
Sbjct: 113 QDVYLGKPSLYRPIEATERVKNNRK-----VGFWFATGGAGFCISRGLALKMSPWASGGR 167

Query: 61  FISICEKIRLPDDCTMGYIIEHRLQRPMTVIEEFHSHLEPMKFLHQDKFSQQVTFSYMQY 120
           F+S  EKIRLPDDCT+GYIIE+ L  P+T    FHSHLE ++ L  +   +QVT SY ++
Sbjct: 168 FMSTSEKIRLPDDCTLGYIIENLLGVPLTHSPLFHSHLENLQDLPPETLHEQVTLSYGKF 227

Query: 121 AKDVVNRLNI----ESFDTSVDPTR 141
                N+ N+      F  ++DPTR
Sbjct: 228 W----NKRNVIKVKGGFSLNIDPTR 248

The drosophila protein fringe (FNG) is a glucosaminyltransferase that controls the response of the Notch receptor to specific ligands. FNG is localised to the Golgi apparatus (not secreted as previously thought). Modification of Notch occurs through glycosylation by FNG. The xenopus homologue, lunatic fringe, has been implicated in a variety of functions. Length = 248

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	142
PF02434	252	Fringe: Fringe-like; InterPro: IPR003378 The Notch	100.0
PLN03153	537	hypothetical protein; Provisional	99.09
PF04646	255	DUF604: Protein of unknown function, DUF604; Inter	97.39
KOG2246|consensus	364		95.64
PF01762	195	Galactosyl_T: Galactosyltransferase; InterPro: IPR	93.41
PLN03193	408	beta-1,3-galactosyltransferase; Provisional	93.26
KOG2287|consensus	349		90.31
KOG2288|consensus	274		85.4

>PF02434 Fringe: Fringe-like; InterPro: IPR003378 The Notch receptor is a large, cell surface transmembrane protein involved in a wide variety of developmental processes in higher organisms []

Probab=100.00  E-value=3.8e-50  Score=328.64  Aligned_cols=137  Identities=46%  Similarity=0.720  Sum_probs=84.7

Q ss_pred             CCeeeccCCCCCCceeeccCCCCCcCccceeeEEeeecceeeEeCHHHHHhhcccccCCceeeecccccCCCCceeeeee
Q psy2488           1 EDWYLGKRSIKTPLKILNREGKNKTSKQQFVKFWFGTGGAGYCISRALALKMLPIASGGKFISICEKIRLPDDCTMGYII   80 (142)
Q Consensus         1 ~D~YlGkpS~~~pi~~~e~~~~~~~~~~~~v~fwFATGGAG~CiSr~La~KM~pwa~~g~f~~t~~~irlPDDctlG~II   80 (142)
                      +|||||+|+..+|+++.++..++   ..+.+.||||||||||||||+|++||.||+++++++.+++++++||||+||+||
T Consensus       115 ~~~yiG~~~~~~~~~~~~~~~~~---~~~~~~~~f~~GGaG~vlSr~~~~k~~~~~~~~~~~~~~~~~~~~dD~~lG~ci  191 (252)
T PF02434_consen  115 EPIYIGRPSGDRPIEIIHRFNPN---KSKDSGFWFATGGAGYVLSRALLKKMSPWASGCKCPSTDEKIRLPDDMTLGYCI  191 (252)
T ss_dssp             S--EEE-EE-------------------------EE-GGG-EEEEHHHHHHHHHHHTT-TTS--TTTTTS-HHHHHHHHH
T ss_pred             cCEEeeeeccCccceeecccccc---ccCcCceEeeCCCeeHHHhHHHHHHHhhhcccccccCCcCCCCCcccChhhhhH
Confidence            58999999999999997775544   346889999999999999999999999999999999999999999999999999


Q ss_pred             eeccCCCceeccccccCccCcccCCccccccceeeeecCCCCCccceeeccC-CCCCCCCCC
Q psy2488          81 EHRLQRPMTVIEEFHSHLEPMKFLHQDKFSQQVTFSYMQYAKDVVNRLNIES-FDTSVDPTR  141 (142)
Q Consensus        81 e~~Lgv~lt~s~lFHSHlE~L~~l~~~~L~~QvtlSyg~~~~~~~N~i~~~~-F~~~~DPtR  141 (142)
                      +.+|||++|+|++||||+|+|++|++++|.+||+||||+++| ++|+++|++ |+.++||||
T Consensus       192 ~~~lgv~lt~s~~fhs~~~~l~~~~~~~l~~q~~~s~~~~~~-~~n~~~~~~~f~~~~dp~r  252 (252)
T PF02434_consen  192 ENLLGVPLTHSPLFHSHLENLQDYNPETLHRQVPISYHKFEN-KINIINVKGPFSFEEDPTR  252 (252)
T ss_dssp             HHTT---EEE-TT---SSS-GGG--TTTGGG-SEEE-EEETT-EEE------SS-TTT-TTS
T ss_pred             HhcCCcceeechhhcccCcccccCCHHHhccCCCeecCCCcC-ccCceecCCCCCccCCCCC
Confidence            999999999999999999999999999999999999999997 999999998 999999999

It becomes activated when its extracellular region binds to ligands located on adjacent cells. Much of this extracellular region is composed of EGF-like repeats, many of which can be O-fucosylated. A number of these O-fucosylated repeats can in turn be further modified by the action of a beta-1,3-N-acetylglucosaminyltransferase enzyme known as Fringe []. Fringe potentiates the activation of Notch by Delta ligands, while inhibiting activation by Serrate/Jagged ligands. This regulation of Notch signalling by Fringe is important in many processes []. Four distinct Fringe proteins have so far been studied in detail; Drosophila Fringe (Dfng) and its three mammalian homologues Lunatic Fringe (Lfng), Radical Fringe (Rfng) and Manic Fringe (Mfng). Dfng, Lfng and Rfng have all been shown to play important roles in developmental processes within their host, though the phenotype of mutants can vary between species e.g. Rfng mutants are retarded in wing development in chickens, but have no obvious phenotype in mice [, , ]. Mfng mutants have not, so far, been charcterised. Biochemical studies indicate that the Fringe proteins are fucose-specific transferases requiring manganese for activity and utilising UDP-N-acetylglucosamine as a donor substrate []. The three mammalian proteins show distinct variations in their catalytic efficiencies with different substrates. Dfng is a glucosaminyltransferase that controls the response of the Notch receptor to specific ligands which is localised to the Golgi apparatus [] (not secreted as previously thought). Modification of Notch occurs through glycosylation by Dfng. This entry consists of Fringe proteins and related glycosyltransferase enzymes including: Beta-1,3-glucosyltransferase, which glucosylates O-linked fucosylglycan on thrombospondin type 1 repeat domains []. Core 1 beta1,3-galactosyltransferase 1, generates the core T antigen, which is a precursor for many extended O-glycans in glycoproteins and plays a central role in many processes, such as angiogenesis, thrombopoiesis and kidney homeostasis development []. ; GO: 0016757 transferase activity, transferring glycosyl groups, 0016020 membrane; PDB: 2J0B_A 2J0A_A.

>PLN03153 hypothetical protein; Provisional

Probab=99.09  E-value=4.4e-11  Score=108.58  Aligned_cols=99  Identities=22%  Similarity=0.218  Sum_probs=74.5

Q ss_pred             CCeeeccCCCCCCceeeccCCCCCcCccceeeEEeeecceeeEeCHHHHHhhcccccCCceeeeccc---ccCCCCceee
Q psy2488           1 EDWYLGKRSIKTPLKILNREGKNKTSKQQFVKFWFGTGGAGYCISRALALKMLPIASGGKFISICEK---IRLPDDCTMG   77 (142)
Q Consensus         1 ~D~YlGkpS~~~pi~~~e~~~~~~~~~~~~v~fwFATGGAG~CiSr~La~KM~pwa~~g~f~~t~~~---irlPDDctlG   77 (142)
                      +.+|||.+|-..+        .|     ...+|.||+|||||+|||+||.+|.+.-      ..|..   -....|+.||
T Consensus       239 kp~YIGs~Se~~~--------qn-----~~f~~~fA~GGAG~~LSrPLae~L~~~~------d~C~~rY~~~~~gD~rL~  299 (537)
T PLN03153        239 EMVYVGGPSESHS--------AN-----SYFSHNMAFGGGGIAISYPLAEALSRIL------DDCLDRYPKLYGSDDRLH  299 (537)
T ss_pred             CCEEecccccccc--------cc-----cccccccccCCceEEEcHHHHHHHHHHh------hhhhhhcccCCCcHHHHH
Confidence            4678888885331        11     2335689999999999999999999852      22321   1356788999


Q ss_pred             eeeeeccCCCceeccccccCccCcccCCccccccc---eeeeecCCC
Q psy2488          78 YIIEHRLQRPMTVIEEFHSHLEPMKFLHQDKFSQQ---VTFSYMQYA  121 (142)
Q Consensus        78 ~IIe~~Lgv~lt~s~lFHSHlE~L~~l~~~~L~~Q---vtlSyg~~~  121 (142)
                      .||+. +||+||+.+.|||  ..+..-+..-|..+   ..+|.|+.+
T Consensus       300 ~CL~e-lGV~LT~~~gfhQ--~D~~Gd~~G~les~p~~P~vSlHH~~  343 (537)
T PLN03153        300 ACITE-LGVPLSREPGFHQ--WDIRGNAHGLLSSHPIAPFVSIHHVE  343 (537)
T ss_pred             HHHHH-cCCCceecCCccc--cccCCCcchHhhcCCCCCceeeeecc
Confidence            99994 7999999999999  77887777777766   347888874

>PF04646 DUF604: Protein of unknown function, DUF604; InterPro: IPR006740 This family includes a conserved region found in several uncharacterised plant proteins

Probab=97.39  E-value=2.5e-05  Score=65.98  Aligned_cols=63  Identities=24%  Similarity=0.331  Sum_probs=46.9

Q ss_pred             eeeEEeeecceeeEeCHHHHHhhcccccCCceeeeccccc-CCCCceeeeeeeeccCCCceeccccccC
Q psy2488          30 FVKFWFGTGGAGYCISRALALKMLPIASGGKFISICEKIR-LPDDCTMGYIIEHRLQRPMTVIEEFHSH   97 (142)
Q Consensus        30 ~v~fwFATGGAG~CiSr~La~KM~pwa~~g~f~~t~~~ir-lPDDctlG~IIe~~Lgv~lt~s~lFHSH   97 (142)
                      ..+|..|=|||||-||++||.+|.+.-- +   |..+--. -.-|--|-.||. .|||+||..+-|||.
T Consensus         4 ~fs~~MAfGGgG~~iS~pLa~~L~~~~d-~---C~~r~~~~~g~D~~i~~C~~-~lgv~LT~e~g~hQ~   67 (255)
T PF04646_consen    4 MFSYNMAFGGGGFAISYPLAKALAKMQD-D---CIERYPHLYGGDQRIQACIA-ELGVPLTKEPGFHQM   67 (255)
T ss_pred             eeeccccccCceeEEcHHHHHHHHHHHH-H---HHHhcCCCCCchHHHHHHHH-HhCCCceecCCceeE
Confidence            3467779999999999999999998321 1   3222222 245777778886 499999999999994

>KOG2246|consensus

Probab=95.64  E-value=0.0032  Score=55.25  Aligned_cols=54  Identities=22%  Similarity=0.321  Sum_probs=39.9

Q ss_pred             eeecceeeEeCHHHHHhhcccccCCceeeeccccc--CCCCceeeeeeeeccCCCceec
Q psy2488          35 FGTGGAGYCISRALALKMLPIASGGKFISICEKIR--LPDDCTMGYIIEHRLQRPMTVI   91 (142)
Q Consensus        35 FATGGAG~CiSr~La~KM~pwa~~g~f~~t~~~ir--lPDDctlG~IIe~~Lgv~lt~s   91 (142)
                      |..||||.++|+++......=+.  +-...|..=-  -++|..||.|++ .+||+++.+
T Consensus       213 y~~g~ag~~ls~aa~~~la~~l~--~~~~~C~~~~~~~~eD~~i~~Cl~-~~GV~~~d~  268 (364)
T KOG2246|consen  213 YSSGGAGYVLSFAALRRLAERLL--NNEDKCPQRYPSYGEDRRIGRCLA-EVGVPATDE  268 (364)
T ss_pred             cccCCCCcceeHHHHHHHHHHHh--cchhhcccccCCchhHHHHHHHHH-HhCCCccCc
Confidence            77899999999887766443222  2224454433  599999999999 799999999

>PF01762 Galactosyl_T: Galactosyltransferase; InterPro: IPR002659 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases

Probab=93.41  E-value=0.024  Score=43.95  Aligned_cols=52  Identities=17%  Similarity=0.189  Sum_probs=39.5

Q ss_pred             eeEEeeecceeeEeCHHHHHhhcccccCCceeeecccccCCCCceeeeeeeeccCCCceec
Q psy2488          31 VKFWFGTGGAGYCISRALALKMLPIASGGKFISICEKIRLPDDCTMGYIIEHRLQRPMTVI   91 (142)
Q Consensus        31 v~fwFATGGAG~CiSr~La~KM~pwa~~g~f~~t~~~irlPDDctlG~IIe~~Lgv~lt~s   91 (142)
                      ..-.|++| +|+-||+.+|.++..++..     + +.+ --||+.+|.+.+ .+|++.++-
T Consensus       143 ~yP~y~~G-~~yvls~~~v~~i~~~~~~-----~-~~~-~~eDv~iGi~~~-~~~i~~~~~  194 (195)
T PF01762_consen  143 YYPPYCSG-GGYVLSSDVVKRIYKASSH-----T-PFF-PLEDVFIGILAE-KLGIKPIHD  194 (195)
T ss_pred             cCCCcCCC-CeEEecHHHHHHHHHHhhc-----C-CCC-CchHHHHHHHHH-HCCCCccCC
Confidence            34457775 5799999999999986552     2 333 369999999998 899887764

These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 31 (GH31 from CAZY) comprises enzymes with a number of known activities; N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase (2.4.1.149 from EC); beta-1,3-galactosyltransferase (2.4.1 from EC); fucose-specific beta-1,3-N-acetylglucosaminyltransferase (2.4.1 from EC); globotriosylceramide beta-1,3-GalNAc transferase (2.4.1.79 from EC) [, ].; GO: 0008378 galactosyltransferase activity, 0006486 protein glycosylation, 0016020 membrane

>PLN03193 beta-1,3-galactosyltransferase; Provisional

Probab=93.26  E-value=0.039  Score=49.57  Aligned_cols=58  Identities=21%  Similarity=0.188  Sum_probs=43.7

Q ss_pred             eeeEEeeecceeeEeCHHHHHhhcccccCCceeeecccccCCCCceeeeeeeeccCCCceecccccc
Q psy2488          30 FVKFWFGTGGAGYCISRALALKMLPIASGGKFISICEKIRLPDDCTMGYIIEHRLQRPMTVIEEFHS   96 (142)
Q Consensus        30 ~v~fwFATGGAG~CiSr~La~KM~pwa~~g~f~~t~~~irlPDDctlG~IIe~~Lgv~lt~s~lFHS   96 (142)
                      ...|.||+|++ |.||+.||..+.-   +..   .-... -.||++||.++. -|+|+-.+..-|+.
T Consensus       298 ~~YPpyAsG~g-YVlS~DLa~~I~~---n~~---~L~~y-~~EDV~vG~Wl~-~L~V~~vdd~~fcc  355 (408)
T PLN03193        298 NKYFRHATGQL-YAISKDLASYISI---NQH---VLHKY-ANEDVSLGSWFI-GLDVEHIDDRRLCC  355 (408)
T ss_pred             ccCCCCCCcce-EEehHHHHHHHHh---Chh---hhccc-CcchhhhhhHhc-cCCceeeecccccC
Confidence            55677899865 9999999999962   111   11122 389999999997 68999999988864

>KOG2287|consensus

Probab=90.31  E-value=0.11  Score=44.98  Aligned_cols=57  Identities=23%  Similarity=0.231  Sum_probs=41.4

Q ss_pred             eeEEeeecceeeEeCHHHHHhhcccccCCceeeecccccCCCCceeeeeeeeccCCCceeccccc
Q psy2488          31 VKFWFGTGGAGYCISRALALKMLPIASGGKFISICEKIRLPDDCTMGYIIEHRLQRPMTVIEEFH   95 (142)
Q Consensus        31 v~fwFATGGAG~CiSr~La~KM~pwa~~g~f~~t~~~irlPDDctlG~IIe~~Lgv~lt~s~lFH   95 (142)
                      +.--||.|++ |.||+.+|.++--=+..-+|..       .||+.+|-|++..+|++...-+.|.
T Consensus       249 ~YP~Y~sG~g-Yvis~~~a~~l~~~s~~~~~~~-------iEDV~~g~~l~~~~gi~~~~~~~~~  305 (349)
T KOG2287|consen  249 VYPPYASGPG-YVISGDAARRLLKASKHLKFFP-------IEDVFVGGCLAEDLGIKPVNHPGFF  305 (349)
T ss_pred             CCCCcCCCce-eEecHHHHHHHHHHhcCCCccc-------hHHHHHHHHHHHhcCCCcccCcccc
Confidence            4456777755 9999999999988333233333       7999999999988787766655533

>KOG2288|consensus

Probab=85.40  E-value=0.62  Score=40.07  Aligned_cols=49  Identities=20%  Similarity=0.284  Sum_probs=32.5

Q ss_pred             eEEeeecceeeEeCHHHHHhhcccccCCceeeecccccCCCCceeeeeeeeccCCCceec
Q psy2488          32 KFWFGTGGAGYCISRALALKMLPIASGGKFISICEKIRLPDDCTMGYIIEHRLQRPMTVI   91 (142)
Q Consensus        32 ~fwFATGGAG~CiSr~La~KM~pwa~~g~f~~t~~~irlPDDctlG~IIe~~Lgv~lt~s   91 (142)
                      .|-+||||. +.|||.||.-+.=  ....|-.     =-.||++||-++-   |+++.|.
T Consensus       170 YfrhA~G~~-YvlS~dLa~yi~i--n~~lL~~-----y~nEDVSlGaW~~---gldV~h~  218 (274)
T KOG2288|consen  170 YFRHATGGG-YVLSKDLATYISI--NRQLLHK-----YANEDVSLGAWMI---GLDVEHV  218 (274)
T ss_pred             cchhccCce-EEeeHHHHHHHHH--hHHHHHh-----hccCCcccceeee---eeeeeEe
Confidence            899999976 9999999975443  1111100     1259999999875   4445443

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	142
2j0a_A	280	Structure Of The Catalytic Domain Of Mouse Manic Fr		2e-26

>pdb|2J0A|A Chain A, Structure Of The Catalytic Domain Of Mouse Manic Fringe Length = 280

Iteration: 1
 Score =  114 bits (286), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 62/144 (43%), Positives = 84/144 (58%), Gaps = 11/144 (7%)
Query: 2   DWYLGKRSIKTPLKILNREGKNKTSKQQFVKFWFGTGGAGYCISRALALKMLPIASGGKF 61
           D Y+GK S+  P+     + K +T   + V+FWF TGGAG+CI+R LALKM+P ASG  F
Sbjct: 123 DVYVGKPSLNRPIHASELQSKQRT---KLVRFWFATGGAGFCINRQLALKMVPWASGSHF 179
Query: 62  ISICEKIRLPDDCTMGYIIEHRLQRPMTVIEEFHSHLEPMKFLHQDKFSQQVTFSYMQYA 121
           +     IRLPDDCT+GYIIE +L   +     FHSHLE ++ L   +  +QVT SY  + 
Sbjct: 180 VDTSALIRLPDDCTVGYIIECKLGGRLQPSPLFHSHLETLQLLGAAQLPEQVTLSYGVFE 239
Query: 122 KDVVNRLNI----ESFDTSVDPTR 141
                +LN+      F    DP+R
Sbjct: 240 ----GKLNVIKLPGPFSHEEDPSR 259

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	142
2j0a_A	280	Beta-1,3-N-acetylglucosaminyltransferase manic FR;	8e-41

>2j0a_A Beta-1,3-N-acetylglucosaminyltransferase manic FR; glycosyltransferase, developmental protein, transmembrane, G apparatus, notch signaling; 1.8A {Mus musculus} PDB: 2j0b_A* Length = 280

 Score =  136 bits (343), Expect = 8e-41
 Identities = 61/142 (42%), Positives = 84/142 (59%), Gaps = 5/142 (3%)

Query: 1   EDWYLGKRSIKTPLKILNREGKNKTSKQQFVKFWFGTGGAGYCISRALALKMLPIASGGK 60
            D Y+GK S+  P+     + K +T     V+FWF TGGAG+CI+R LALKM+P ASG  
Sbjct: 122 RDVYVGKPSLNRPIHASELQSKQRTKL---VRFWFATGGAGFCINRQLALKMVPWASGSH 178

Query: 61  FISICEKIRLPDDCTMGYIIEHRLQRPMTVIEEFHSHLEPMKFLHQDKFSQQVTFSYMQY 120
           F+     IRLPDDCT+GYIIE +L   +     FHSHLE ++ L   +  +QVT SY  +
Sbjct: 179 FVDTSALIRLPDDCTVGYIIECKLGGRLQPSPLFHSHLETLQLLGAAQLPEQVTLSYGVF 238

Query: 121 AKDVVNRLNIE-SFDTSVDPTR 141
            +  +N + +   F    DP+R
Sbjct: 239 -EGKLNVIKLPGPFSHEEDPSR 259

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	142
2j0a_A	280	Beta-1,3-N-acetylglucosaminyltransferase manic FR;	100.0

>2j0a_A Beta-1,3-N-acetylglucosaminyltransferase manic FR; glycosyltransferase, developmental protein, transmembrane, G apparatus, notch signaling; 1.8A {Mus musculus} PDB: 2j0b_A*

Probab=100.00  E-value=1.4e-39  Score=267.17  Aligned_cols=137  Identities=44%  Similarity=0.830  Sum_probs=115.4

Q ss_pred             CCeeeccCCCCCCceeeccCCCCCcCccceeeEEeeecceeeEeCHHHHHhhcccccCCceeeecccccCCCCceeeeee
Q psy2488           1 EDWYLGKRSIKTPLKILNREGKNKTSKQQFVKFWFGTGGAGYCISRALALKMLPIASGGKFISICEKIRLPDDCTMGYII   80 (142)
Q Consensus         1 ~D~YlGkpS~~~pi~~~e~~~~~~~~~~~~v~fwFATGGAG~CiSr~La~KM~pwa~~g~f~~t~~~irlPDDctlG~II   80 (142)
                      +++|+|+++..+|+++.++...+   ....+.||||+|||||||||++|+||.+|++..+|+++|+.++.||||.||+|+
T Consensus       122 ~~~YiG~~~~~~~~~~~~~~~~~---~~~~~~~~y~~GGaG~vlSr~~l~~l~~~~~~~~~~~~~~~~~~~dD~~lG~Cl  198 (280)
T 2j0a_A          122 RDVYVGKPSLNRPIHASELQSKQ---RTKLVRFWFATGGAGFCINRQLALKMVPWASGSHFVDTSALIRLPDDCTVGYII  198 (280)
T ss_dssp             SCCEEECEEC----------------------CCEECGGGCEEEEHHHHHHHHHHHTTCTTSCCTTTTTSCHHHHHHHHH
T ss_pred             CCEEEEEeccCccccccccCccc---cccccccCcccCCCEEEECHHHHHHHHHhhcccccccccccCCCCccHHHHHHH
Confidence            58999999999998876665433   235678999999999999999999999999999999999999999999999999


Q ss_pred             eeccCCCceeccccccCccCcccCCccccccceeeeecCCCCCccceeeccC-CCCCCCCCC
Q psy2488          81 EHRLQRPMTVIEEFHSHLEPMKFLHQDKFSQQVTFSYMQYAKDVVNRLNIES-FDTSVDPTR  141 (142)
Q Consensus        81 e~~Lgv~lt~s~lFHSHlE~L~~l~~~~L~~QvtlSyg~~~~~~~N~i~~~~-F~~~~DPtR  141 (142)
                      +..|||+++++++||||+|.|+++++++|.+||++|||.+++ +||++++++ |+.++||||
T Consensus       199 ~~~lGV~~~~~~~Fh~~~~~~~~~~~~~l~~~~~~s~~~~~~-~~n~~~~~~~f~~~~dp~r  259 (280)
T 2j0a_A          199 ECKLGGRLQPSPLFHSHLETLQLLGAAQLPEQVTLSYGVFEG-KLNVIKLPGPFSHEEDPSR  259 (280)
T ss_dssp             HHTTCCCEEECTTCCCSSSCGGGCCTTTGGGCSEEECEEETT-EEECCCCCCSSCTTTCTTS
T ss_pred             HhcCCCCceecccccCCCchhccCCHHHhccCcceecccccC-ccceeccCCccccccCCcc
Confidence            989999999999999999999999999999999999999988 999999999 999999999

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00