Psyllid ID: psy3288


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------
MLQISGCKARVSLSDIRLPLMWRDSDYFKNKGDYRRFAVFCLVRSGTELYDTSLLCPVDRSHTDLTFQDVLLLVVVVSAVDFGSGGWWFESKSIVWV
cccccccccEEEEcccEEEEEEEccccccccccccEEEEEEEEEEccEEEEccEEEEEccccEEEEEccEEEEEEEcccEEccccccccEEEEEEEc
cccccccccEEEEEccEcEEEcccccHccccccccEEEEEEEEEcccEEEcccEEEEccccccEEEcccEEEEEEEccccccccEEEEEEccEEEEc
mlqisgckarvslsdirlplmwrdsdyfknkgdyRRFAVFCLVRSgtelydtsllcpvdrshtdltfqDVLLLVVVVSAvdfgsggwwfeSKSIVWV
mlqisgckarvslsdirlplmwrdsdyfknkgdYRRFAVFCLVRSGTELYDTSLLCPVDRSHTDLTFQDVLLLVVVVSAVDfgsggwwfesksivwv
MLQISGCKARVSLSDIRLPLMWRDSDYFKNKGDYRRFAVFCLVRSGTELYDTSLLCPVDRSHTDLTFQDvlllvvvvSAVDFGSGGWWFESKSIVWV
******CKARVSLSDIRLPLMWRDSDYFKNKGDYRRFAVFCLVRSGTELYDTSLLCPVDRSHTDLTFQDVLLLVVVVSAVDFGSGGWWFESKSIVW*
***********SLSDIRLPLMWRDSDYFKNKGDYRRFAVFCLVRSGTELYDTSLLCPVDRSHTDLTFQDVLLLVVVVSAVDFGSGGWWFESKSIVWV
MLQISGCKARVSLSDIRLPLMWRDSDYFKNKGDYRRFAVFCLVRSGTELYDTSLLCPVDRSHTDLTFQDVLLLVVVVSAVDFGSGGWWFESKSIVWV
****SGCKARVSLSDIRLPLMWRDSDYFKNKGDYRRFAVFCLVRSGTELYDTSLLCPVDRSHTDLTFQDVLLLVVVVSAVDFGSGGWWFESKSIVWV
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooo
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MLQISGCKARVSLSDIRLPLMWRDSDYFKNKGDYRRFAVFCLVRSGTELYDTSLLCPVDRSHTDLTFQDVLLLVVVVSAVDFGSGGWWFESKSIVWV
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query97 2.2.26 [Sep-21-2011]
Q8C6B2 564 Rhotekin OS=Mus musculus yes N/A 0.721 0.124 0.507 3e-16
Q9BST9 563 Rhotekin OS=Homo sapiens yes N/A 0.701 0.120 0.507 1e-15
Q6V7V2 548 Rhotekin OS=Rattus norveg yes N/A 0.659 0.116 0.523 1e-15
Q14B46 604 Rhotekin-2 OS=Mus musculu no N/A 0.680 0.109 0.477 2e-15
Q8IZC4 609 Rhotekin-2 OS=Homo sapien no N/A 0.701 0.111 0.449 3e-15
Q5XGX5 612 Rhotekin-2 OS=Xenopus lae N/A N/A 0.659 0.104 0.461 3e-13
Q5XIZ9 642 Rhotekin-2 OS=Danio rerio no N/A 0.649 0.098 0.453 4e-13
>sp|Q8C6B2|RTKN_MOUSE Rhotekin OS=Mus musculus GN=Rtkn PE=1 SV=3 Back     alignment and function desciption
 Score = 84.0 bits (206), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 36/71 (50%), Positives = 55/71 (77%), Gaps = 1/71 (1%)

Query: 3   QISGCKARVSLSDIRLPLMWRDSDYFKNKGDYRRFAVFCLVRSGTELYDTSLLCPVDRSH 62
           Q S C+ RV +SD+R+PLMW+D++YFKNKGD  R+AVF L++ G ++ DT ++  VDR+ 
Sbjct: 113 QHSPCRGRVCISDLRIPLMWKDTEYFKNKGDLHRWAVFLLLQIGEQIQDTEMVL-VDRTL 171

Query: 63  TDLTFQDVLLL 73
           TD++FQ+ +L 
Sbjct: 172 TDISFQNNVLF 182




Mediates Rho signaling to activate NF-kappa-B and may confer increased resistance to apoptosis to cells in gastric tumorigenesis. May play a novel role in the organization of septin structures.
Mus musculus (taxid: 10090)
>sp|Q9BST9|RTKN_HUMAN Rhotekin OS=Homo sapiens GN=RTKN PE=1 SV=2 Back     alignment and function description
>sp|Q6V7V2|RTKN_RAT Rhotekin OS=Rattus norvegicus GN=Rtkn PE=2 SV=1 Back     alignment and function description
>sp|Q14B46|RTKN2_MOUSE Rhotekin-2 OS=Mus musculus GN=Rtkn2 PE=2 SV=2 Back     alignment and function description
>sp|Q8IZC4|RTKN2_HUMAN Rhotekin-2 OS=Homo sapiens GN=RTKN2 PE=2 SV=1 Back     alignment and function description
>sp|Q5XGX5|RTKN2_XENLA Rhotekin-2 OS=Xenopus laevis GN=rtkn2 PE=2 SV=1 Back     alignment and function description
>sp|Q5XIZ9|RTKN2_DANRE Rhotekin-2 OS=Danio rerio GN=rtkn2 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query97
328722515 511 PREDICTED: rhotekin-like isoform 2 [Acyr 0.711 0.135 0.782 2e-26
328722513 512 PREDICTED: rhotekin-like isoform 1 [Acyr 0.711 0.134 0.782 2e-26
307182569 501 Rhotekin-2 [Camponotus floridanus] 0.711 0.137 0.681 1e-25
242021339 363 rhotekin, putative [Pediculus humanus co 0.680 0.181 0.772 1e-25
332027689 518 Rhotekin [Acromyrmex echinatior] 0.721 0.135 0.7 2e-25
307202134 523 Rhotekin [Harpegnathos saltator] 0.721 0.133 0.671 4e-25
405971613 496 Rhotekin [Crassostrea gigas] 0.690 0.135 0.686 3e-23
321477038 259 hypothetical protein DAPPUDRAFT_23978 [D 0.742 0.277 0.652 9e-23
328783455 454 PREDICTED: rhotekin-like [Apis mellifera 0.680 0.145 0.636 5e-22
443714747 511 hypothetical protein CAPTEDRAFT_224976 [ 0.690 0.131 0.641 2e-20
>gi|328722515|ref|XP_003247596.1| PREDICTED: rhotekin-like isoform 2 [Acyrthosiphon pisum] Back     alignment and taxonomy information
 Score =  123 bits (308), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 54/69 (78%), Positives = 62/69 (89%)

Query: 5   SGCKARVSLSDIRLPLMWRDSDYFKNKGDYRRFAVFCLVRSGTELYDTSLLCPVDRSHTD 64
           +G KARVSLSD+RLPLMWRD+D+FKNKGDYRRFAVFCL + GT+LYDTSL+ PVDRS TD
Sbjct: 117 NGGKARVSLSDLRLPLMWRDTDHFKNKGDYRRFAVFCLAKIGTQLYDTSLMFPVDRSMTD 176

Query: 65  LTFQDVLLL 73
           +TF DVLL 
Sbjct: 177 VTFNDVLLF 185




Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328722513|ref|XP_001943988.2| PREDICTED: rhotekin-like isoform 1 [Acyrthosiphon pisum] Back     alignment and taxonomy information
>gi|307182569|gb|EFN69762.1| Rhotekin-2 [Camponotus floridanus] Back     alignment and taxonomy information
>gi|242021339|ref|XP_002431102.1| rhotekin, putative [Pediculus humanus corporis] gi|212516351|gb|EEB18364.1| rhotekin, putative [Pediculus humanus corporis] Back     alignment and taxonomy information
>gi|332027689|gb|EGI67757.1| Rhotekin [Acromyrmex echinatior] Back     alignment and taxonomy information
>gi|307202134|gb|EFN81634.1| Rhotekin [Harpegnathos saltator] Back     alignment and taxonomy information
>gi|405971613|gb|EKC36439.1| Rhotekin [Crassostrea gigas] Back     alignment and taxonomy information
>gi|321477038|gb|EFX87997.1| hypothetical protein DAPPUDRAFT_23978 [Daphnia pulex] Back     alignment and taxonomy information
>gi|328783455|ref|XP_393113.3| PREDICTED: rhotekin-like [Apis mellifera] Back     alignment and taxonomy information
>gi|443714747|gb|ELU07024.1| hypothetical protein CAPTEDRAFT_224976 [Capitella teleta] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query97
ZFIN|ZDB-GENE-040912-64 308 zgc:101635 "zgc:101635" [Danio 0.639 0.201 0.587 3.2e-17
ZFIN|ZDB-GENE-091204-360 499 si:dkey-264m23.3 "si:dkey-264m 0.639 0.124 0.587 2.1e-16
ZFIN|ZDB-GENE-060531-142 630 si:dkey-40c11.1 "si:dkey-40c11 0.659 0.101 0.523 8.3e-15
MGI|MGI:107371 564 Rtkn "rhotekin" [Mus musculus 0.680 0.117 0.522 1.1e-14
UNIPROTKB|F6XED7 454 RTKN "Uncharacterized protein" 0.659 0.140 0.523 1.5e-14
RGD|727874 548 Rtkn "rhotekin" [Rattus norveg 0.659 0.116 0.523 1.7e-14
UNIPROTKB|Q6V7V2 548 Rtkn "Rhotekin" [Rattus norveg 0.659 0.116 0.523 1.7e-14
UNIPROTKB|E2R2M9 551 RTKN "Uncharacterized protein" 0.659 0.116 0.523 2.3e-14
UNIPROTKB|E2R3E9 564 RTKN "Uncharacterized protein" 0.659 0.113 0.523 2.4e-14
UNIPROTKB|H7BXD4 513 RTKN "Rhotekin" [Homo sapiens 0.649 0.122 0.531 2.5e-14
ZFIN|ZDB-GENE-040912-64 zgc:101635 "zgc:101635" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
 Score = 211 (79.3 bits), Expect = 3.2e-17, P = 3.2e-17
 Identities = 37/63 (58%), Positives = 53/63 (84%)

Query:     7 CKARVSLSDIRLPLMWRDSDYFKNKGDYRRFAVFCLVRSGTELYDTSLLCPVDRSHTDLT 66
             C A++++SDIR+PLMW+DS+YFKNKG+  R AVFCL++ GTE+YDT L+  VDR+ TD+ 
Sbjct:    98 CTAKLAISDIRIPLMWKDSEYFKNKGELHRCAVFCLLQVGTEIYDTELVI-VDRTLTDVC 156

Query:    67 FQD 69
             F++
Sbjct:   157 FEE 159




GO:0003674 "molecular_function" evidence=ND
ZFIN|ZDB-GENE-091204-360 si:dkey-264m23.3 "si:dkey-264m23.3" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-060531-142 si:dkey-40c11.1 "si:dkey-40c11.1" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
MGI|MGI:107371 Rtkn "rhotekin" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|F6XED7 RTKN "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
RGD|727874 Rtkn "rhotekin" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|Q6V7V2 Rtkn "Rhotekin" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|E2R2M9 RTKN "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|E2R3E9 RTKN "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|H7BXD4 RTKN "Rhotekin" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q8C6B2RTKN_MOUSENo assigned EC number0.50700.72160.1241yesN/A
Q6V7V2RTKN_RATNo assigned EC number0.52300.65970.1167yesN/A
Q9BST9RTKN_HUMANNo assigned EC number0.50720.70100.1207yesN/A

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query97
pfam08174129 pfam08174, Anillin, Cell division protein anillin 5e-10
>gnl|CDD|219738 pfam08174, Anillin, Cell division protein anillin Back     alignment and domain information
 Score = 52.0 bits (125), Expect = 5e-10
 Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 4/71 (5%)

Query: 7  CKARVSLSDIRLPLMWRDSDYFKN-KGDYRRFAVFCLVRSGTELYDTSLLCPV-DRS--H 62
          CK  V +S+IR+PL  + S + +      RR A F L++ G + +D + L    D S   
Sbjct: 2  CKGLVEVSEIRIPLKKKFSFFSRLFSSPKRREAFFVLLKYGADEWDATFLLVASDGSFAR 61

Query: 63 TDLTFQDVLLL 73
            + F DV+  
Sbjct: 62 CYVCFDDVIEF 72


Anillin is a protein involved in septin organisation during cell division. It is an actin binding protein that is localised to the cleavage furrow, and it maintains the localisation of active myosin, which ensures the spatial control of concerted contraction during cytokinesis. Length = 129

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 97
PF08174140 Anillin: Cell division protein anillin; InterPro: 99.9
KOG3640|consensus 1116 96.29
>PF08174 Anillin: Cell division protein anillin; InterPro: IPR012966 This is a conserved domain in the anillin family of proteins, which are involved in cell division [] Back     alignment and domain information
Probab=99.90  E-value=2.4e-24  Score=149.60  Aligned_cols=79  Identities=43%  Similarity=0.718  Sum_probs=70.7

Q ss_pred             cceeeEEeccceeeeeeeccc---ccccCCcceeEEEEEEEeeC-CEEeecceeeeecCC--cceeeeCceEeeecCCCC
Q psy3288           6 GCKARVSLSDIRLPLMWRDSD---YFKNKGDYRRFAVFCLVRSG-TELYDTSLLCPVDRS--HTDLTFQDVLLLVVVVSA   79 (97)
Q Consensus         6 pCrgkv~iSdlRIPLmWkdse---~F~nkge~~r~AvFcllq~g-~eI~DT~lv~~VDrt--~TDI~F~d~~iF~~~~pD   79 (97)
                      ||+|+|+|||||||||||+++   +|+|+++ ++|++||++|+| +++.+|.+++..|.+  .++|+|++.+.|++++||
T Consensus         1 p~~g~v~is~i~iPl~~k~~~~~~~f~~~~~-~~~~~~~l~k~~~~~~~~t~~~~~~dgs~~~~~i~f~~~~~~~~~~~d   79 (140)
T PF08174_consen    1 PCKGSVTISDIRIPLKWKFSDFSRLFKSKGK-RRFAFFCLLKYGPEEWDATFLVVARDGSFARTDICFPDTFEFSNVGPD   79 (140)
T ss_pred             CCCccCcccCcccCcccccchhHHhhCCCCC-ceEEEEEEEecCCceEEEEeeEEccCcccccceEecCceeeecccCCC
Confidence            899999999999999999998   9988887 999999999999 778888776544423  899999999999999999


Q ss_pred             eEEeec
Q psy3288          80 VDFGSG   85 (97)
Q Consensus        80 Fel~~~   85 (97)
                      |++++.
T Consensus        80 F~v~ve   85 (140)
T PF08174_consen   80 FEVTVE   85 (140)
T ss_pred             cEEEEE
Confidence            999864



In Schizosaccharomyces pombe (Fission yeast, anillin (Mid2) is involved in septin ring organisation and cell separation [, ]. The domain is found adjacent to a 'pleckstrin homology' (PH) domain. The PH domain occurs in a wide range of proteins involved in intracellular signalling or as constituents of the cytoskeleton (IPR001849 from INTERPRO).

>KOG3640|consensus Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00