Psyllid ID: psy4365


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------930-------940-------950-------960-------970-------980-------990------1000------1010------1020---
MLLYLYLIKAKFFSFEINFFLFIGVRDQGWGGLCSDCSVQCTPFTSPHYPVLERPRLAKSAEWADSVVLCCLVEFEIPLLRSYFREVDIGEYLNKGHWRLSEALNISNYLNYVFGGGRTPYPSDGRSPSPTSEVGYGSYRSTTPSIFTLDNATSDNEGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLRIGLIANNERNLDKAEIRTALQNWQMGIIMNEDETKRAMARQRSVGDGCNDQTVLQQQQAQQVFKKPANKRREPRRHTLQNGIDYNMVRLDFRFNFVPCSRVMFSDVFVVTEKDLVTEKDLGHVLSNLMEGLMQVLTAVSSIEGNVSTTSTKHSSHLSTR
ccEEEEEEEcccEEEEEEEEEEEEEEEcccccccccccEEEccccccccccccccccccccccccEEEEEEEEEEEccccccccEEEEEEEEEEccEEEEEEEEEEcccEEEEEEccEEEEccccccccccEEEEccEEEEEccEEEEEEcEEEEEEEEEEEEEEEccEEEEEEEccEEEEEEEEEcEEEEEEcccEEEEEEEEcccEEEEEEcEEEEEEEEEccEEEEEEEccEEEEEEEEcccEEEEEEEcEEEEEEEEEcEEEEEEEccEEEEEEEEcccEEEEEEccEEEEEEEEccEEEEEEEccEEEEEEEEcccEEEEEEccEEEEEEEEEcEEEEEEEccEEEEEEEEccEEEEEEEccEEEEEEEEEcEEEEEEEccEEEEEEEEEEEEEEEEEccEEEEEEEEcccEEEEEEccEEEEEEEEcccEEEEEEccEEEEEEEEEcEEEEEEcccEEEEEEEEccEEEEEEEEcEEEEEEEEEcEEEEEEEccEEEEEEEEEccEEEEEEccEEEEEEEEccEEEEEEEccEEEEEEEEEEEEEEEEEccEEEEEEEEccEEEEEEEccEEEEEEEEccEEEEEEEEcEEEEEEEEccccEEEEEcEEEEEEEEEccEEEEEEEccEEEEEEEEccEEEEEEcccEEEEEEEEEcEEEEEEEccEEEEEEEEccEEEEEEEccEEEEEEEEEcccEEEEEccEEEEEEEEccEEEEEEcccEEEEEEEEccEEEEEEEccEEEEEEEEEcEEEEEEEccEEEEEEEEccEEEEEEEccEEEEEEEEEcEEEEEEcccEEEEEEEEcccEEEEEEccEEEEEEEEEcEEEEEEEccEEEEEEEEccEEEEEEcccEEEEEEEEccEEEEEcEEEEEEEEEccEEEEEEcccccEEEEEEEEccccccccEEEEccccccEEEccccccccccccccccccEEEEEEEEEEEEEEEccEEEEEEEEEEEEccccccccHHHHHHHHHHHHHHHHEEEEccccccEEcccccccccccc
cHEHHHHHHHHEEEEEEEEEEEEEEccccccccccccccccccccccccccccccHHHHHHHHccccEHEEHHHccccccccccccccccccEccccccccEEEEccccccEEEccccEEEEEEEccccccEEEccccccEEEEEEEEEEEEEEcccccEEEEEEcccEEEEEccccEEEEEEEcccEEEEEEccccEEEEEEcccEEEEEcccccEEEEEEcccEEEEEcccccEEEEEEccccEEEEEccccEEEEEEcccEEEEEEccccEEEEEEcccEEEEEcccccEEEEEEcccEEEEEEccccEEEEEEcccEEEEEEccccEEEEEEcccEEEEEEccccEEEEEEccEEEEEEccccEEEEEEEccEEEEEEEccccEEEEEEcccEEEEEEccccEEEEEEcccEEEEEEccccEEEEEEcccEEEEEEccccEEEEEEcccEEEEEEccccEEEEEEccccEEEEEcccEEEEEEEccEEEEEEEccccEEEEEEccEEEEEEEcccEEEEEEEcccEEEEEEccccEEEEEEcccEEEEEEccccEEEEEEcccEEEEEEccccEEEEEEccccEEEEEccccEEEEEEcccEEEEEEcccEEEEEEEccccEEEEEcccEEEEEEEcccEEEEEEcccEEEEEEEccccEEEEEccccEEEEEEccccEEEEEccccEEEEEEccccEEEEEccccEEEEEEccccEEEEEcccEEEEEEEccccEEEEEccccEEEEEEccccEEEEEccccEEEEEEccccEEEEEcccEEEEEEEccccEEEEEccccEEEEEEccccEEEEEEcccEEEEEEccccEEEEEccccEEEEEEccccEEEEEEcccEEEEEEEcccccccHHHHHHHHHHHHHHHHccccccccccccccccccccccHHHcccccccccccccccccccccccccccccccccEEEcEEEEccccccEEEccEEEEEccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccc
MLLYLYLIKAKFFSFEINFFLFIGVrdqgwgglcsdcsvqctpftsphypvlerprlaksaeWADSVVLCCLVEFEIPLLRSYFREVDIGEYLNKGHWRLSEALNISNYLnyvfgggrtpypsdgrspsptsevgygsyrsttpsiftldnatsdnegtlsstrinkgtlssrinkgtlsstrinkgtlssrinkgtlsstrinkgtlssrinkgtlsstrinkgtlssrinkgtlsstrinkgtlssrinkgtlsstrinkgtlssrinkgtlsstrinkgtlssrinkgtlsstrinkgtlssrinkgtlsstrinkgtlssrinkgtlsstrinkgtlssrinkgtlsstrinkgtlssrinkgtlsstrinkgtlssrinkgtlsstrinkgtlssrinkgtlsstrinkgtlssrinkgtlsstrinkgtlssrinkgtlsstrinkgtlssrinkgtlsstrinkgtlssrinkgtlsstrinkgtlssrinkgtlsstrinkgtlssrinkgtlsstrinkgtlssrinkgtlsstrinkgtlssrinkgtlsstrinkgtlssrinkgtlsstrinkgtlssrinkgtlsstrinkgtlssrinkgtlsstrinkgtlssrinkgtlsstrinkgtlssrinkgtlsstrinkgtlssrinkgtlsstrinkgtlssrinkgtlsstrinkgtlssrinkgtlsstrinkgtlssrinkgtlsstrinkgtlssrinkgtlsstrinkgtlssrinkgtlsstrinkgtlssrinkgtlsstrinkgtlssrinkgtlsstrinkgtlssrinkgtlsstrinkgtlssrinkgtlsstrinkgtlssrinkgtLRIGLiannernlDKAEIRTALQNWQMGIIMNEDETKRAMARQrsvgdgcndqTVLQQQQAQQVFkkpankrreprrhtlqngidynmvrldfrfnfvpcsrvmfsdVFVVTEKDLVTEKDLGHVLSNLMEGLMQVLTAVSSiegnvsttstkhsshlstr
MLLYLYLIKAKFFSFEINFFLFIGVRDQGWGGLCSDCSVQCTPFTSPHYPVLERPRLAKSAEWADSVVLCCLVEFEIPLLRSYFREVDIGEYLNKGHWRLSEALNISNYLNYVFGGGRTPYPSDGRSPSPTSEVGYGSYRSTTPSIFTldnatsdnegtlsstrinkgtlssrinkgtlsstrinkgtlssrinkgtlsstrinkgtlssrinkgtlsstrinkgtlssrinkgtlsstrinkgtlssrinkgtlsstrinkgtlssrinkgtlsstrinkgtlssrinkgtlsstrinkgtlssrinkgtlsstrinkgtlssrinkgtlsstrinkgtlssrinkgtlsstrinkgtlssrinkgtlsstrinkgtlssrinkgtlsstrinkgtlssrinkgtlsstrinkgtlssrinkgtlsstrinkgtlssrinkgtlsstrinkgtlssrinkgtlsstrinkgtlssrinkgtlsstrinkgtlssrinkgtlsstrinkgtlssrinkgtlsstrinkgtlssrinkgtlsstrinkgtlssrinkgtlsstrinkgtlssrinkgtlsstrinkgtlssrinkgtlsstrinkgtlssrinkgtlsstrinkgtlssrinkgtlsstrinkgtlssrinkgtlsstrinkgtlssrinkgtlsstrinkgtlssrinkgtlsstrinkgtlssrinkgtlsstrinkgtlssrinkgtlsstrinkgtlssrinkgtlsstrinkgtlssrinkgtlsstrinkgtlssrinkgtlsstrinkgtlssrinkgtlsstrinkgtlssrinkgtlsstrinkgtlssrinkgtlsstrinkgtlssrinkgtlrigliannernldkAEIRTALQNWQMGIIMNEDETKRAMARQRSVGDGCNDQTVLQQQQAQQvfkkpankrreprrhtlqngidynmvrLDFRFNFVPCSRVMFSDVFVVTEKDLVTEKDLGHVLSNLMEGLMQVLTAVSsiegnvsttstkhsshlstr
MLLYLYLIKAKffsfeinfflfIGVRDQGWGGLCSDCSVQCTPFTSPHYPVLERPRLAKSAEWADSVVLCCLVEFEIPLLRSYFREVDIGEYLNKGHWRLSEALNISNYLNYVFGGGRTPYPSDGRSPSPTSEVGYGSYRSTTPSIFTLDNATSDNEGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLRIGLIANNERNLDKAEIRTALQNWQMGIIMNEDETKRAMARQRSVGDGCNDQTVLqqqqaqqVFKKPANKRREPRRHTLQNGIDYNMVRLDFRFNFVPCSRVMFSDVFVVTEKDLVTEKDLGHVLSNLMEGLMQVLTAVSSIEGNVsttstkhsshlstR
*LLYLYLIKAKFFSFEINFFLFIGVRDQGWGGLCSDCSVQCTPFTSPHYPVLERPRLAKSAEWADSVVLCCLVEFEIPLLRSYFREVDIGEYLNKGHWRLSEALNISNYLNYVFGGG********************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************INKGTLRIGLIANNERNLDKAEIRTALQNWQMGIIM*************************************************QNGIDYNMVRLDFRFNFVPCSRVMFSDVFVVTEKDLVTEKDLGHVLSNLMEGLMQVLTAV*********************
MLLYLYLIKAKFFSFEINFFLFIGVRDQGWGGLCSDCSVQCTPFTSPHYPVLERPRLAKSAEWADSVVLCCLVEFEIPLLRSYFREVDIGEYLNKGHWRLSEALNISNYLNYVFGGGRTPYPSDGRSPSPTSEVGYGSYRSTTPSIFTLDNATSDNEGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLRIGLIANNERNLDKAEIRTALQNWQMGIIMNEDETKRAMARQRSVGDGCNDQTV************************LQNGIDYNMVRLDFRFNFVPCSRVMFSDVFVVTEKDLVTEKDLGHVLSNLMEGLMQVLTAVSSIEGN***************
MLLYLYLIKAKFFSFEINFFLFIGVRDQGWGGLCSDCSVQCTPFTSPHYPVLERPRLAKSAEWADSVVLCCLVEFEIPLLRSYFREVDIGEYLNKGHWRLSEALNISNYLNYVFGGGRTPY*************GYGSYRSTTPSIFTLDNATSDNEGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLRIGLIANNERNLDKAEIRTALQNWQMGIIMNEDETKRAMARQRSVGDGCNDQTVLQ*****************PRRHTLQNGIDYNMVRLDFRFNFVPCSRVMFSDVFVVTEKDLVTEKDLGHVLSNLMEGLMQVLTAVSSIEGNV**************
MLLYLYLIKAKFFSFEINFFLFIGVRDQGWGGLCSDCSVQCTPFTSPHYPVLERPRLAKSAEWADSVVLCCLVEFEIPLLRSYFREVDIGEYLNKGHWRLSEALNISNYLNYVFGGGRTPYPSDGRSPSPTSEVGYGSYRSTTPSIFTLDNATSDNEGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLRIGLIANNERNLDKAEIRTALQNWQMGIIMNE******************************************RRHTLQNGIDYNMVRLDFRFNFVPCSRVMFSDVFVVTEKDLVTEKDLGHVLSNLMEGLMQVLTAVSS*******************
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MLLYLYLIKAKFFSFEINFFLFIGVRDQGWGGLCSDCSVQCTPFTSPHYPVLERPRLAKSAEWADSVVLCCLVEFEIPLLRSYFREVDIGEYLNKGHWRLSEALNISNYLNYVFGGGRTPYPSDGRSPSPTSEVGYGSYRSTTPSIFTLDNATSDNEGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLRIGLIANNERNLDKAEIRTALQNWQMGIIMNEDETKRAMARQRSVGDGCNDQTVLQQQQAQQVFKKPANKRREPRRHTLQNGIDYNMVRLDFRFNFVPCSRVMFSDVFVVTEKDLVTEKDLGHVLSNLMEGLMQVLTAVSSIEGNVSTTSTKHSSHLSTR
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query1023 2.2.26 [Sep-21-2011]
Q9C0Y2 1220 Putative cell agglutinati yes N/A 0.620 0.520 0.263 1e-21
D2TV88 1593 Probable autotransporter yes N/A 0.650 0.417 0.290 9e-10
>sp|Q9C0Y2|YKL1_SCHPO Putative cell agglutination protein PB2C8.01 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAPB2C8.01 PE=3 SV=1 Back     alignment and function desciption
 Score =  106 bits (264), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 201/763 (26%), Positives = 318/763 (41%), Gaps = 128/763 (16%)

Query: 148 TLDNATSDNEGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRIN--KGTLSSTRINK 205
           TLD+A      T+       GT+++ I  GT   T  N  TL+S  +   GT+       
Sbjct: 126 TLDSANGTTPATIEVVEPAAGTVTTTIYSGT---TPFNT-TLASATDTVPGTVEVVEPEA 181

Query: 206 GTLSSRINKGTLSST---RINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINK 262
           GT+++ +  GT   T       GT+S     GT+       GT+++ I  GT   T  N 
Sbjct: 182 GTVTTTVYSGTQEYTTTLATASGTVS-----GTVEVVDTAAGTVTTTIYSGT---TPFNT 233

Query: 263 GTLSSRIN--KGTLSSTRINKGTLSSRINKGTLSST---RINKGTLSSRINKGTLSSTRI 317
            TL+S  +   GT+       GT+++ +  GT   T       GT+S     GT+     
Sbjct: 234 -TLASATDTVPGTVEVVEPEAGTVTTTVYSGTQEYTTTLATASGTVS-----GTVEVVDT 287

Query: 318 NKGTLSSRINKGTLSSTRINKGTLSSRIN--KGTLSSTRINKGTLSSRINKGTLSST--- 372
             GT+++ I  GT   T  N  TL+S  +   GT+       GT+++ +  GT   T   
Sbjct: 288 AAGTVTTTIYSGT---TPFNT-TLASATDTVPGTVEVVEPEAGTVTTTVYSGTQEYTTTL 343

Query: 373 RINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRIN--KGTLSSTR 430
               GT+S     GT+       GT+++ I  GT   T  N  TL+S  +   GT+    
Sbjct: 344 ATASGTVS-----GTVEVVDTAAGTVTTTIYSGT---TPFNT-TLASATDTVPGTVEVVE 394

Query: 431 INKGTLSSRINKGTLSST---RINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTR 487
              GT+++ +  GT   T       GT+S     GT+       GT+++ I  GT   T 
Sbjct: 395 PEAGTVTTTVYSGTQEYTTTLATASGTVS-----GTVEVVDTAAGTVTTTIYSGT---TP 446

Query: 488 INKGTLSSRIN--KGTLSSTRINKGTLSSRINKGTLSST---RINKGTLSSRINKGTLSS 542
            N  TL+S  +   GT+       GT+++ +  GT   T       GT+S     GT+  
Sbjct: 447 FNT-TLASATDTVPGTVEVVEPEAGTVTTTVYSGTQEYTTTLATASGTVS-----GTVEV 500

Query: 543 TRINKGTLSSRINKGTLSSTRINKGTLSSRIN--KGTLSSTRINKGTLSSRINKGTLSST 600
                GT+++ I  GT   T  N  TL+S  +   GT+       GT+++ +  GT   T
Sbjct: 501 VDTAAGTVTTTIYSGT---TPFNT-TLASATDTVPGTVEVVEPEAGTVTTTVYSGTQEYT 556

Query: 601 ---RINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRIN--KGTLS 655
                  GT+S     GT+       GT+++ I  GT   T  N  TL+S  +   GT+ 
Sbjct: 557 TTLATASGTVS-----GTVEVVDTAAGTVTTTIYSGT---TPFNT-TLASATDTVPGTVE 607

Query: 656 STRINKGTLSSRINKGTLSST---RINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLS 712
                 GT+++ +  GT   T       GT+S     GT+       GT+++ +  GT  
Sbjct: 608 VVEPEAGTVTTTVYSGTQEYTTTLATASGTVS-----GTVEVIEPAAGTVTTTVYSGTQE 662

Query: 713 ST---RINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSST---RINKGTLSSRINKG 766
            T       GT+S     GT+       GT++S +  GT   T       GT+S     G
Sbjct: 663 YTTTLATASGTVS-----GTVEVIEPAAGTVTSTVYSGTQEYTTTLATASGTVS-----G 712

Query: 767 TLSSTRINKGTLSSRINKGTLSST---RINKGTLSSRINKGTLSSTRINKGTLSSRINKG 823
           T+       GT+++ +  GT   T       GT+S     GT+       GT+++ +  G
Sbjct: 713 TVEVIEPAAGTVTTTVYSGTQEYTTTLATASGTVS-----GTVEVIEPAAGTVTTTVYSG 767

Query: 824 TLSSTRINKGTLSSRIN--KGTLSSTRINKGTLSSRINKGTLR 864
               + +   TL+S      GT+       G++++ I  G++ 
Sbjct: 768 ----SEVYTTTLASASESVPGTVEVVDPEAGSVTTTIYSGSVE 806




Cell-type specific protein which may be involved in agglutination during conjugation or other aspects of colony formation.
Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)
>sp|D2TV88|Y1121_CITRI Probable autotransporter ROD_p1121 OS=Citrobacter rodentium (strain ICC168) GN=ROD_p1121 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query1023
344248582618 hypothetical protein I79_014354 [Cricetu 0.566 0.938 0.413 6e-57
432096364 1222 Mucin-19 [Myotis davidii] 0.683 0.572 0.402 2e-48
261404564 2422 hypothetical protein GYMC10_0698 [Paenib 0.707 0.298 0.198 1e-44
342183006 2299 conserved hypothetical protein [Trypanos 0.548 0.244 0.269 3e-40
449278229521 Aggrecan core protein, partial [Columba 0.509 1.0 0.209 2e-38
156385593181 predicted protein [Nematostella vectensi 0.167 0.944 0.480 2e-31
342183261 1128 conserved hypothetical protein [Trypanos 0.695 0.630 0.176 5e-25
317493118749 pertactin, partial [Enterobacteriaceae b 0.468 0.639 0.328 2e-24
19114899 1220 cell surface glycoprotein (predicted) [S 0.620 0.520 0.263 7e-20
260836232535 hypothetical protein BRAFLDRAFT_89995 [B 0.451 0.863 0.272 4e-19
>gi|344248582|gb|EGW04686.1| hypothetical protein I79_014354 [Cricetulus griseus] Back     alignment and taxonomy information
 Score =  229 bits (584), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 276/668 (41%), Positives = 369/668 (55%), Gaps = 88/668 (13%)

Query: 179 LSSTRINKGTL-SSRINKGTLSSTRINKGTL--SSRINKGTLSSTRINKGTLSSRINKGT 235
           L  T ++K  L SS +N+  L  TR+++  L  ++ INK   S+TR     LSSR+++ T
Sbjct: 2   LCCTWLHKSILISSWLNQTILIYTRLDQARLNQATLINKSLHSTTR-----LSSRLHQAT 56

Query: 236 LSSTRINKGTL--SSRINKGTLSSTRINKGTLSSRINKGTLSSTRI-NKGTLSSRINKGT 292
           L  TR+   TL  S  I+KG  S TR     L SR N+ T S+ R+ N   LSSR+++ T
Sbjct: 57  LIYTRLRNTTLHNSMLIHKGLHSPTR-----LCSRRNQATRSNARLPNTTRLSSRLHQAT 111

Query: 293 LSSTRINKGTL--SSRINKGTLSSTRINKGTLSSRINKGTLSSTRI-NKGTLSSRINKGT 349
           L  TR+   TL  S  I+KG  S TR     L SR N+ T S+ R+ N   LSSR+++ T
Sbjct: 112 LIYTRLRNTTLHNSMLIHKGLHSPTR-----LCSRRNQATRSNARLPNTTRLSSRLHQAT 166

Query: 350 LSSTRINKGTL--SSRINKGTLSSTRINKGTLSSRINKGTLSSTRI-NKGTLSSRINKGT 406
           L  TR+   TL  S  I+KG  S TR     L SR N+ T S+ R+ N   LSSR+++ T
Sbjct: 167 LIYTRLRNTTLHNSMLIHKGLHSPTR-----LCSRRNQATRSNARLPNTTRLSSRLHQAT 221

Query: 407 LSSTRINKGTL--SSRINKGTLSSTRINKGTLSSRINKGTLSSTRI-NKGTLSSRINKGT 463
           L  TR+   TL  S  I+KG  S TR     L SR N+ T S+ R+ N   LSSR+++ T
Sbjct: 222 LIYTRLRNTTLHNSMLIHKGLHSPTR-----LCSRRNQATRSNARLPNTTRLSSRLHQAT 276

Query: 464 LSSTRINKGTL--SSRINKGTLSSTRINKGTLSSRINKGTLSSTRI-NKGTLSSRINKGT 520
           L  TR+   TL  S  I+KG  S TR     L SR N+ T S+ R+ N   LSSR+++ T
Sbjct: 277 LIYTRLRNTTLHNSMLIHKGLHSPTR-----LCSRRNQATRSNARLPNTTRLSSRLHQAT 331

Query: 521 LSSTRINKGTL--SSRINKGTLSSTRINKGTLSSRINKGTLSSTRI-NKGTLSSRINKGT 577
           L  TR+   TL  S  I+KG  S TR     L SR N+ T S+ R+ N   LSSR+++ T
Sbjct: 332 LIYTRLRNTTLHNSMLIHKGLHSPTR-----LCSRRNQATRSNARLPNTTRLSSRLHQAT 386

Query: 578 LSSTRINKGTL--SSRINKGTLSSTRINKGTLSSRINKGTLSSTRI-NKGTLSSRINKGT 634
           L  TR+   TL  S  I+KG  S TR     L SR N+ T S+ R+ N   LSSR+++ T
Sbjct: 387 LIYTRLRNTTLHNSMLIHKGLHSPTR-----LCSRRNQATRSNARLPNTTRLSSRLHQAT 441

Query: 635 LSSTRINKGTL--SSRINKGTLSSTRINKGTLSSRINKGTLSSTRI-NKGTLSSRINKGT 691
           L  TR+   TL  S  I+KG  S TR     L SR N+ T S+ R+ N   LSSR+++ T
Sbjct: 442 LIYTRLRNTTLHNSMLIHKGLHSPTR-----LCSRRNQATRSNARLPNTTRLSSRLHQAT 496

Query: 692 LSSTRINKGTL--SSRINKGTLSSTRINKGTLSSRINKGTLSSTRI-NKGTLSSRINKGT 748
           L  TR+   TL  S  I+KG  S TR     L SR N+ T S+ R+ N   LSSR+++ T
Sbjct: 497 LIYTRLRNTTLHNSMLIHKGLHSPTR-----LCSRRNQATRSNARLPNTTRLSSRLHQAT 551

Query: 749 LSSTRINKGTL--SSRINKGTLSSTRINKGTLSSRINKGTLSSTRI-NKGTLSSRINKGT 805
           L  TR+   TL  S  I+KG  S TR     L SR N+ T S+ R+ N   L SR+N+ T
Sbjct: 552 LIYTRLRNTTLHNSMLIHKGLHSPTR-----LCSRRNQATRSNARLPNTTRLCSRLNQAT 606

Query: 806 LSSTRINK 813
           L  TR+ K
Sbjct: 607 LFCTRLCK 614




Source: Cricetulus griseus

Species: Cricetulus griseus

Genus: Cricetulus

Family: Cricetidae

Order: Rodentia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|432096364|gb|ELK27120.1| Mucin-19 [Myotis davidii] Back     alignment and taxonomy information
>gi|261404564|ref|YP_003240805.1| hypothetical protein GYMC10_0698 [Paenibacillus sp. Y412MC10] gi|261281027|gb|ACX62998.1| hypothetical protein GYMC10_0698 [Paenibacillus sp. Y412MC10] Back     alignment and taxonomy information
>gi|342183006|emb|CCC92486.1| conserved hypothetical protein [Trypanosoma congolense IL3000] Back     alignment and taxonomy information
>gi|449278229|gb|EMC86155.1| Aggrecan core protein, partial [Columba livia] Back     alignment and taxonomy information
>gi|156385593|ref|XP_001633714.1| predicted protein [Nematostella vectensis] gi|156220788|gb|EDO41651.1| predicted protein [Nematostella vectensis] Back     alignment and taxonomy information
>gi|342183261|emb|CCC92741.1| conserved hypothetical protein [Trypanosoma congolense IL3000] Back     alignment and taxonomy information
>gi|317493118|ref|ZP_07951541.1| pertactin, partial [Enterobacteriaceae bacterium 9_2_54FAA] gi|316918778|gb|EFV40114.1| pertactin [Enterobacteriaceae bacterium 9_2_54FAA] Back     alignment and taxonomy information
>gi|19114899|ref|NP_593987.1| cell surface glycoprotein (predicted) [Schizosaccharomyces pombe 972h-] gi|74638358|sp|Q9C0Y2.1|YKL1_SCHPO RecName: Full=Putative cell agglutination protein PB2C8.01; Flags: Precursor gi|13624753|emb|CAC36908.1| cell surface glycoprotein (predicted) [Schizosaccharomyces pombe] Back     alignment and taxonomy information
>gi|260836232|ref|XP_002613110.1| hypothetical protein BRAFLDRAFT_89995 [Branchiostoma floridae] gi|229298494|gb|EEN69119.1| hypothetical protein BRAFLDRAFT_89995 [Branchiostoma floridae] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query1023
POMBASE|SPBPJ4664.02 3971 SPBPJ4664.02 "cell surface gly 0.663 0.170 0.350 5.7e-31
POMBASE|SPAPB2C8.01 1220 SPAPB2C8.01 "cell surface glyc 0.687 0.576 0.253 3.9e-27
POMBASE|SPAPB15E9.01c1036 SPAPB15E9.01c "sequence orphan 0.680 0.671 0.238 3.4e-25
FB|FBgn0038492 2112 Mur89F "Mucin related 89F" [Dr 0.688 0.333 0.248 4.5e-25
WB|WBGene00019435 2232 K06A9.1 [Caenorhabditis elegan 0.701 0.321 0.232 7.3e-24
POMBASE|SPAPB1E7.04c1236 SPAPB1E7.04c "chitinase (predi 0.699 0.579 0.25 2.4e-23
POMBASE|SPBC1289.15 1283 SPBC1289.15 "cell surface glyc 0.657 0.524 0.271 8.7e-23
SGD|S0000049361140 YMR317W "Putative protein of u 0.696 0.625 0.239 9.4e-23
WB|WBGene000191461275 H02F09.3 [Caenorhabditis elega 0.671 0.538 0.238 1.4e-22
UNIPROTKB|F1PHH5 4996 MUC5B "Uncharacterized protein 0.666 0.136 0.271 1.7e-22
POMBASE|SPBPJ4664.02 SPBPJ4664.02 "cell surface glycoprotein (predicted)" [Schizosaccharomyces pombe (taxid:4896)] Back     alignment and assigned GO terms
 Score = 385 (140.6 bits), Expect = 5.7e-31, P = 5.7e-31
 Identities = 300/856 (35%), Positives = 390/856 (45%)

Query:   119 TPYPSDGRSPSPTSEVGYGSYRSTTP--SIFTLDNATSDNEGTLSSTRINKGTLSSRINK 176
             TP  S     + T      +  ++TP  S   L+++T     T+ +T     T S+ +N 
Sbjct:  2758 TPITSSTVVNTSTPITSSTALNTSTPITSSSVLNSSTPITSSTVVNTS-TPITSSTVVNS 2816

Query:   177 GT--LSSTRINKGT---LSSRINKGT--LSSTRINKGT---LSSRINKGT--LSSTRINK 224
              T   SST +N  T    SS +N  T   SST +N  T    SS +N  T   SST +N 
Sbjct:  2817 STPITSSTVLNSSTPITSSSVLNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTALNT 2876

Query:   225 GTL---SSRINKGT--LSSTRINKGT---LSSRINKGTLSSTRINKGTLSSRINKGT--L 274
              T    SS +N  T   SST +N  T    SS +N    SST I   T+   +N  T   
Sbjct:  2877 STSITSSSVLNSSTPITSSTVVNTSTPITSSSVLN----SSTPITSSTV---VNTSTPIT 2929

Query:   275 SSTRINKGT-LSSRINKGTLSSTRINKGTLSSRINKGT--LSSTRINKGTL---SSRINK 328
             SST +N  T ++S     T  ST I   T SS +N  T   SST +N  T    SS +N 
Sbjct:  2930 SSTVVNSSTPITSSTALNT--STPI---TSSSVLNSSTPITSSTALNTSTSITSSSVLNS 2984

Query:   329 GT--LSSTRINKGT---LSSRINKGT--LSSTRINKGT---LSSRINKGT--LSSTRINK 376
              T   SST +N  T    SS +N  T   SST +N  T    S+ +N  T   SST +N 
Sbjct:  2985 STPITSSTVVNTSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTALNT 3044

Query:   377 GTLSSRINKGTL--SSTRINKGTLSSRINKGT--LSSTRINKGT---LSSRINKGTLSST 429
              T    I   T+  SST I   T SS +N  T   SST +N  T    SS +N    SST
Sbjct:  3045 ST---PITSSTVLNSSTPI---TSSSVLNSSTPITSSTALNTSTPITSSSVLN----SST 3094

Query:   430 RINKGTLSSRINKGT--LSSTRINKGTL---SSRINKGTLSSTRINKGTLSSRINKGT-- 482
              I   T SS +N  T   SS+ +N  T    SS +N    SST I   T SS +N  T  
Sbjct:  3095 AI---TSSSIVNSSTPITSSSVLNSSTAITSSSILN----SSTPI---TSSSILNSSTPI 3144

Query:   483 LSSTRINKGT-LSSRINKGTLSSTRINKGTLSSRINKGTL--SSTRINKGT---LSSRIN 536
              SST +N  T ++S     T  ST I   T SS +N  T   SS+ +N  T    SS +N
Sbjct:  3145 TSSTVVNSSTPITSSTTLNT--STPI---TSSSVLNSSTAITSSSIVNSSTPITSSSVLN 3199

Query:   537 KGT--LSSTRINKGT---LSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSR 591
               T   SST +N  T    SS +N    SST I   T SS +N    SST I   T SS 
Sbjct:  3200 SSTPITSSTTLNTSTPITSSSVLN----SSTAI---TSSSVLN----SSTPI---TSSSV 3245

Query:   592 INKGT--LSSTRINKGT---LSSRINKGT--LSSTRINKGT---LSSRINKGT--LSSTR 639
             +N  T   SST +N  T    SS +N  T   SST +N  T    S+ +N  T   SST 
Sbjct:  3246 LNSSTPITSSTVVNTSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTT 3305

Query:   640 INKGT---LSSRINKGTL--SSTRINKGTLSSRINKGTL-SSTRINKGTLSSRINKGTLS 693
             +N  T    SS +N  T   SST +N  T  +  +   L SST I   T SS +N    S
Sbjct:  3306 LNTSTPITSSSVLNSSTAITSSTALNTSTPIT--SSSVLNSSTAI---TSSSILN----S 3356

Query:   694 STRINKGTLSSRINKGT--LSSTRINKGT-LSSRINKGTLSSTRINKGTLSSRINKGT-- 748
             ST +   T SS +N  T   SST +N  T ++S     T  ST I   T SS +N  T  
Sbjct:  3357 STPV---TSSSVLNSSTPITSSTVVNSSTPITSSTALNT--STPI---TSSSVLNSSTPI 3408

Query:   749 LSSTRINKGT---LSSRINKGT--LSSTRINKGT---LSSRINKGTL--SSTRINKGTLS 798
              SST +N  T    S+ +N  T   SST +N  T    SS +N  T   SS+ +N  T  
Sbjct:  3409 TSSTVVNSSTPITSSTALNTSTPITSSTVVNSSTPITSSSVLNSSTAIASSSILNSSTPI 3468

Query:   799 SRINKGTL-SSTRINKGT-LSSRINKGTLSSTRINKGTLSS-RINKGTLSSTRINKGTLS 855
             +  +   L SST I+  T ++S +  G+ S        +SS  +N   LSS+    G  S
Sbjct:  3469 T--SSSVLNSSTPISSSTVITSSVVIGSSSVLSYASSIVSSVSLNSSLLSSSG---GFSS 3523

Query:   856 SRINKGTLRIGLIANN 871
             S  + G+    L + N
Sbjct:  3524 SAFSTGSSSFSLTSEN 3539


GO:0005886 "plasma membrane" evidence=IEA
GO:0007155 "cell adhesion" evidence=NAS
GO:0010339 "external side of cell wall" evidence=NAS
GO:0016740 "transferase activity" evidence=IEA
GO:0031225 "anchored to membrane" evidence=IEA
POMBASE|SPAPB2C8.01 SPAPB2C8.01 "cell surface glycoprotein, adhesion molecule (predicted)" [Schizosaccharomyces pombe (taxid:4896)] Back     alignment and assigned GO terms
POMBASE|SPAPB15E9.01c SPAPB15E9.01c "sequence orphan" [Schizosaccharomyces pombe (taxid:4896)] Back     alignment and assigned GO terms
FB|FBgn0038492 Mur89F "Mucin related 89F" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
WB|WBGene00019435 K06A9.1 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
POMBASE|SPAPB1E7.04c SPAPB1E7.04c "chitinase (predicted)" [Schizosaccharomyces pombe (taxid:4896)] Back     alignment and assigned GO terms
POMBASE|SPBC1289.15 SPBC1289.15 "cell surface glycoprotein (predicted)" [Schizosaccharomyces pombe (taxid:4896)] Back     alignment and assigned GO terms
SGD|S000004936 YMR317W "Putative protein of unknown function with some similarity to sialidase" [Saccharomyces cerevisiae (taxid:4932)] Back     alignment and assigned GO terms
WB|WBGene00019146 H02F09.3 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
UNIPROTKB|F1PHH5 MUC5B "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 1023
PF1141484 Suppressor_APC: Adenomatous polyposis coli tumour 80.5
>PF11414 Suppressor_APC: Adenomatous polyposis coli tumour suppressor protein; PDB: 1M5I_A Back     alignment and domain information
Probab=80.50  E-value=0.43  Score=42.39  Aligned_cols=13  Identities=31%  Similarity=0.590  Sum_probs=6.2

Q ss_pred             cchhhhhhccccc
Q psy4365         946 IDYNMVRLDFRFN  958 (1023)
Q Consensus       946 VDYNMLKRMKELn  958 (1023)
                      |||+|||+||||-
T Consensus         1 ~~~~~lk~mkeLE   13 (84)
T PF11414_consen    1 VDYNMLKRMKELE   13 (84)
T ss_dssp             ------HHHHHHH
T ss_pred             CHhhHHHHHHHHH
Confidence            8999999999984




Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query1023
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 8e-07
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 6e-04
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 52.2 bits (124), Expect = 8e-07
 Identities = 68/512 (13%), Positives = 150/512 (29%), Gaps = 165/512 (32%)

Query: 639  RINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRIN 698
            RIN   L S I       + + +  +  R ++    +    K  +S R+        ++ 
Sbjct: 88   RINYKFLMSPIKTEQRQPSMMTRMYIEQR-DRLYNDNQVFAKYNVS-RLQP----YLKLR 141

Query: 699  KGTLSSRINKG-----------------TLSSTRINKGTLSSRI---NKGTLSSTR---I 735
            +  L  R  K                     S ++ +  +  +I   N    +S      
Sbjct: 142  QALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKV-QCKMDFKIFWLNLKNCNSPETVLE 200

Query: 736  NKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTL-------S 788
                L  +I+    S +  +   +  RI+       R+    L S+  +  L       +
Sbjct: 201  MLQKLLYQIDPNWTSRSDHSS-NIKLRIHSIQAELRRL----LKSKPYENCLLVLLNVQN 255

Query: 789  STRINKGTLSSRINKGTLSSTRINKGTLSSRINKGTLSSTRINK--GTLSSRINKGTLSS 846
            +   N   LS +I    L +TR  K  ++  ++  T +   ++    TL+    K  L  
Sbjct: 256  AKAWNAFNLSCKI----LLTTR-FKQ-VTDFLSAATTTHISLDHHSMTLTPDEVKSLLLK 309

Query: 847  -TRINKGTLSSRINKGT-LRIGLIA----------------NNER----------NLDKA 878
                    L   +      R+ +IA                N ++           L+ A
Sbjct: 310  YLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPA 369

Query: 879  EIRTALQN------------------WQ------MGIIMNEDETKRAMARQRSVGDGCND 914
            E R                       W       + +++N+      + +Q        +
Sbjct: 370  EYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQP------KE 423

Query: 915  QTV----LQQQQAQQVFKKPA------NKRREPR---------------------RH--T 941
             T+    +  +   ++  + A      +    P+                      H   
Sbjct: 424  STISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKN 483

Query: 942  LQNGIDYNMVR---LDFRF--------NFVPCSRVMFSDVFVVTE--KDLVTEKD--LGH 986
            +++     + R   LDFRF        +    +     +     +  K  + + D     
Sbjct: 484  IEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYICDNDPKYER 543

Query: 987  VLSNLMEGLMQVLTAVSSIEGNVSTTSTKHSS 1018
            +++ +++ L +       IE N+    +K++ 
Sbjct: 544  LVNAILDFLPK-------IEENL--ICSKYTD 566


>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00