Psyllid ID: psy4784

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------
Protein Sequence
MELQNRKILEDLQMKKQLLLKQGAAPNSPPISNSMSADQLQHQRAALITANAQSTGFYITQDSSFGNIVLPVLPRYDA
Secondary Structure (PSIPRED)
ccHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHccccEEEEccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHcccccEEEEccccccccEccccccccc
Coil and Loop (DISEMBL)
MELQNRKILEDLQMKKQLLLkqgaapnsppisnsmsaDQLQHQRAALITANaqstgfyitqdssfgnivlpvlpryda
Flexible Loop (DISEMBL)
MELQNRKILEDLQMKKQLLLKQGAAPNSPPISNSMSADQLQHQRAALITANAQSTGFYitqdssfgnivlpvlpryda
Low Complexity Region (SEG)
MELQNRKILEDlqmkkqlllkqGAAPNSPPISNSMSADQLQHQRAALITANAQSTGFYITQDSSFGNIVLPVLPRYDA
Disordered region (IsUnstruct)
*********************************************ALITANAQSTGFYITQDSSFGNIVLPVL*****
Disordered Region (DISOPRED)
***QNRKILEDLQ**************************************AQSTGFYITQDSSFGNIVLPVLPRY**
Disordered Region (DISEMBL)
MELQNRKILEDLQMKKQLLLKQGAAPNSPPISNSMSADQLQHQRAALITANAQSTGFYITQDSSFGNIVLPVLPRYDA
Disordered Region (DISPRO)
MELQNRKILEDLQMKKQLLLKQ*****************************AQSTGFYITQDSSFGNIVLPVLPRYD*
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MELQNRKILEDLQMKKQLLLKQGAAPNSPPISNSMSADQLQHQRAALITANAQSTGFYITQDSSFGNIVLPVLPRYDA
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	78	2.2.26 [Sep-21-2011]
Q5ZJ32	103	SOSS complex subunit C OS	yes	N/A	0.910	0.689	0.423	2e-10
Q7ZV26	103	SOSS complex subunit C OS	yes	N/A	0.897	0.679	0.481	4e-09
Q9NRY2	104	SOSS complex subunit C OS	yes	N/A	0.897	0.673	0.423	8e-09
Q2NKT2	104	SOSS complex subunit C OS	yes	N/A	0.897	0.673	0.423	1e-08
Q3TXT3	104	SOSS complex subunit C OS	yes	N/A	0.897	0.673	0.411	1e-08
B9EQ30	107	SOSS complex subunit C OS	N/A	N/A	0.884	0.644	0.452	1e-08
B5KFM4	104	SOSS complex subunit C OS	yes	N/A	0.910	0.682	0.406	2e-08
Q8AVV6	110	SOSS complex subunit C OS	N/A	N/A	0.910	0.645	0.406	3e-08
B4J184	115	SOSS complex subunit C ho	N/A	N/A	0.858	0.582	0.360	1e-07
B4KZN6	115	SOSS complex subunit C ho	N/A	N/A	0.858	0.582	0.360	1e-07

>sp|Q5ZJ32|SOSSC_CHICK SOSS complex subunit C OS=Gallus gallus GN=INIP PE=3 SV=1

 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 36/85 (42%), Positives = 55/85 (64%), Gaps = 14/85 (16%)

Query: 8   ILEDLQMKKQLLLKQGAAPNSPPISNSMSADQL----------QH----QRAALITANAQ 53
           IL +LQ K++LL++  ++ N P  S +++   L          QH    Q+AAL  A+A 
Sbjct: 18  ILAELQEKRKLLMQNQSSTNHPGASIALARSPLNKDFRDHAEQQHIAAQQKAALQHAHAH 77

Query: 54  STGFYITQDSSFGNIVLPVLPRYDA 78
           S+G++ITQDS+FGN++LPVLPR +A
Sbjct: 78  SSGYFITQDSAFGNLILPVLPRLEA 102

Component of the SOSS complex, a multiprotein complex that functions downstream of the MRN complex to promote DNA repair and G2/M checkpoint. The SOSS complex associates with single-stranded DNA at DNA lesions and influences diverse endpoints in the cellular DNA damage response including cell-cycle checkpoint activation, recombinational repair and maintenance of genomic stability. Required for efficient homologous recombination-dependent repair of double-strand breaks (DSBs).
Gallus gallus (taxid: 9031)

>sp|Q7ZV26|SOSSC_DANRE SOSS complex subunit C OS=Danio rerio GN=inip PE=3 SV=1

 Score = 60.1 bits (144), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 40/83 (48%), Positives = 52/83 (62%), Gaps = 13/83 (15%)

Query: 8   ILEDLQMKKQLLLKQ------GAA-PNSPPISNSMSADQL--QH----QRAALITANAQS 54
           IL +L  +K+ L++       GA+ P S P  N    DQ   QH    Q+AAL  A+A S
Sbjct: 18  ILAELDKEKRRLIQSQTLNNPGASIPLSRPAVNKEFRDQAEQQHIAAQQKAALQHAHAHS 77

Query: 55  TGFYITQDSSFGNIVLPVLPRYD 77
           +GF+ITQDSSFGN++LPVLPR D
Sbjct: 78  SGFFITQDSSFGNLILPVLPRLD 100

Component of the SOSS complex, a multiprotein complex that functions downstream of the MRN complex to promote DNA repair and G2/M checkpoint. The SOSS complex associates with single-stranded DNA at DNA lesions and influences diverse endpoints in the cellular DNA damage response including cell-cycle checkpoint activation, recombinational repair and maintenance of genomic stability. Required for efficient homologous recombination-dependent repair of double-strand breaks (DSBs).

Danio rerio (taxid: 7955)

>sp|Q9NRY2|SOSSC_HUMAN SOSS complex subunit C OS=Homo sapiens GN=INIP PE=1 SV=1

 Score = 59.3 bits (142), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 36/85 (42%), Positives = 54/85 (63%), Gaps = 15/85 (17%)

Query: 8   ILEDL-QMKKQLLLKQGAAPNSPPISNSMSADQL----------QH----QRAALITANA 52
           IL +L + K++LL++  ++ N P  S ++S   L          QH    Q+AAL  A+A
Sbjct: 18  ILAELDKEKRKLLMQNQSSTNHPGASIALSRPSLNKDFRDHAEQQHIAAQQKAALQHAHA 77

Query: 53  QSTGFYITQDSSFGNIVLPVLPRYD 77
            S+G++ITQDS+FGN++LPVLPR D
Sbjct: 78  HSSGYFITQDSAFGNLILPVLPRLD 102

Component of the SOSS complex, a multiprotein complex that functions downstream of the MRN complex to promote DNA repair and G2/M checkpoint. The SOSS complex associates with single-stranded DNA at DNA lesions and influences diverse endpoints in the cellular DNA damage response including cell-cycle checkpoint activation, recombinational repair and maintenance of genomic stability. Required for efficient homologous recombination-dependent repair of double-strand breaks (DSBs) and ATM-dependent signaling pathways.

Homo sapiens (taxid: 9606)

>sp|Q2NKT2|SOSSC_BOVIN SOSS complex subunit C OS=Bos taurus GN=INIP PE=3 SV=1

 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 36/85 (42%), Positives = 54/85 (63%), Gaps = 15/85 (17%)

Query: 8   ILEDL-QMKKQLLLKQGAAPNSPPISNSMSADQL----------QH----QRAALITANA 52
           IL +L + K++LL++  ++ N P  S ++S   L          QH    Q+AAL  A+A
Sbjct: 18  ILAELDKEKRKLLMQNQSSTNHPGASIALSRPALNKDFRDHAEQQHIAAQQKAALQHAHA 77

Query: 53  QSTGFYITQDSSFGNIVLPVLPRYD 77
            S+G++ITQDS+FGN++LPVLPR D
Sbjct: 78  HSSGYFITQDSAFGNLILPVLPRLD 102

Component of the SOSS complex, a multiprotein complex that functions downstream of the MRN complex to promote DNA repair and G2/M checkpoint. The SOSS complex associates with single-stranded DNA at DNA lesions and influences diverse endpoints in the cellular DNA damage response including cell-cycle checkpoint activation, recombinational repair and maintenance of genomic stability. Required for efficient homologous recombination-dependent repair of double-strand breaks (DSBs) and ATM-dependent signaling pathways.

Bos taurus (taxid: 9913)

>sp|Q3TXT3|SOSSC_MOUSE SOSS complex subunit C OS=Mus musculus GN=Inip PE=2 SV=1

 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 35/85 (41%), Positives = 51/85 (60%), Gaps = 15/85 (17%)

Query: 8   ILEDLQMKKQLLLKQGAAPNSPPISN------SMSADQLQH---------QRAALITANA 52
           IL +L  +K+ LL Q  +  S P ++      S++ D   H         Q+AAL  A+A
Sbjct: 18  ILAELDKEKRKLLMQNQSSTSHPGASISLSRPSLTKDFRDHAEQQHIAAQQKAALQHAHA 77

Query: 53  QSTGFYITQDSSFGNIVLPVLPRYD 77
            S+G++ITQDS+FGN++LPVLPR D
Sbjct: 78  HSSGYFITQDSAFGNLILPVLPRLD 102

Component of the SOSS complex, a multiprotein complex that functions downstream of the MRN complex to promote DNA repair and G2/M checkpoint. The SOSS complex associates with single-stranded DNA at DNA lesions and influences diverse endpoints in the cellular DNA damage response including cell-cycle checkpoint activation, recombinational repair and maintenance of genomic stability. Required for efficient homologous recombination-dependent repair of double-strand breaks (DSBs) and ATM-dependent signaling pathways.

Mus musculus (taxid: 10090)

>sp|B9EQ30|SOSSC_SALSA SOSS complex subunit C OS=Salmo salar GN=inip PE=3 SV=1

 Score = 58.2 bits (139), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 38/84 (45%), Positives = 52/84 (61%), Gaps = 15/84 (17%)

Query: 8   ILEDLQMKKQLLLKQGAAPNSPPISNSMSADQL----------QH----QRAALITANAQ 53
           IL +L  +K+ L+ Q ++ N+P  S  +S   L          QH    Q+AAL  A+A 
Sbjct: 18  ILAELDKEKRRLI-QNSSMNNPGASIPLSRPALNKDFRDHAEQQHIAAQQKAALQHAHAH 76

Query: 54  STGFYITQDSSFGNIVLPVLPRYD 77
           S+GF+ITQDSSFGN++LPVLPR D
Sbjct: 77  SSGFFITQDSSFGNLILPVLPRLD 100

Component of the SOSS complex, a multiprotein complex that functions downstream of the MRN complex to promote DNA repair and G2/M checkpoint. The SOSS complex associates with single-stranded DNA at DNA lesions and influences diverse endpoints in the cellular DNA damage response including cell-cycle checkpoint activation, recombinational repair and maintenance of genomic stability. Required for efficient homologous recombination-dependent repair of double-strand breaks (DSBs).

Salmo salar (taxid: 8030)

>sp|B5KFM4|SOSSC_TAEGU SOSS complex subunit C OS=Taeniopygia guttata GN=INIP PE=3 SV=1

 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 35/86 (40%), Positives = 55/86 (63%), Gaps = 15/86 (17%)

Query: 8   ILEDL-QMKKQLLLKQGAAPNSPPISNSMSADQL----------QH----QRAALITANA 52
           IL +L + K++LL++  ++ N P  S +++   L          QH    Q+AAL  A+A
Sbjct: 18  ILAELDKEKRKLLMQNQSSTNHPGASIALTRSPLNKDFRDHAEQQHIAAQQKAALQHAHA 77

Query: 53  QSTGFYITQDSSFGNIVLPVLPRYDA 78
            S+G++ITQDS+FGN++LPVLPR +A
Sbjct: 78  HSSGYFITQDSAFGNLILPVLPRLEA 103

Component of the SOSS complex, a multiprotein complex that functions downstream of the MRN complex to promote DNA repair and G2/M checkpoint. The SOSS complex associates with single-stranded DNA at DNA lesions and influences diverse endpoints in the cellular DNA damage response including cell-cycle checkpoint activation, recombinational repair and maintenance of genomic stability. Required for efficient homologous recombination-dependent repair of double-strand breaks (DSBs).

Taeniopygia guttata (taxid: 59729)

>sp|Q8AVV6|SOSSC_XENLA SOSS complex subunit C OS=Xenopus laevis GN=inip PE=3 SV=1

 Score = 57.0 bits (136), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 35/86 (40%), Positives = 55/86 (63%), Gaps = 15/86 (17%)

Query: 8   ILEDL-QMKKQLLLKQGAAPNSPPIS-----NSMSADQLQH---------QRAALITANA 52
           IL +L + K++LLL+  ++ N+P  S      +M+ D   H         Q+AAL  A+A
Sbjct: 24  ILAELDKEKRKLLLQNQSSTNNPGASIALARPNMNKDFRDHSEQQHIAAQQKAALQHAHA 83

Query: 53  QSTGFYITQDSSFGNIVLPVLPRYDA 78
            S+G++ITQDS+FGN++LPV+PR +A
Sbjct: 84  HSSGYFITQDSAFGNLILPVIPRLEA 109

Component of the SOSS complex, a multiprotein complex that functions downstream of the MRN complex to promote DNA repair and G2/M checkpoint. The SOSS complex associates with single-stranded DNA at DNA lesions and influences diverse endpoints in the cellular DNA damage response including cell-cycle checkpoint activation, recombinational repair and maintenance of genomic stability. Required for efficient homologous recombination-dependent repair of double-strand breaks (DSBs).

Xenopus laevis (taxid: 8355)

>sp|B4J184|SOSSC_DROGR SOSS complex subunit C homolog OS=Drosophila grimshawi GN=GH17167 PE=3 SV=1

 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 35/97 (36%), Positives = 47/97 (48%), Gaps = 30/97 (30%)

Query: 5   NRKILEDLQMKKQLLLKQGAAPNSPPISNSMSADQLQHQ--------------------- 43
           NRKILE++Q KKQLL+  G+       +N M A QL  Q                     
Sbjct: 14  NRKILEEIQTKKQLLIGLGST------TNQMPAPQLLGQPTVTAEFTQGVSVAPNAAGGI 67

Query: 44  ---RAALITANAQSTGFYITQDSSFGNIVLPVLPRYD 77
              R+A    ++ + GF+I QDS FGN  +PVLPR +
Sbjct: 68  AAPRSAFNPTSSTTLGFFIPQDSYFGNSFIPVLPRLE 104

Drosophila grimshawi (taxid: 7222)

>sp|B4KZN6|SOSSC_DROMO SOSS complex subunit C homolog OS=Drosophila mojavensis GN=GI11782 PE=3 SV=1

 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 35/97 (36%), Positives = 47/97 (48%), Gaps = 30/97 (30%)

Query: 5   NRKILEDLQMKKQLLLKQGAAPNSPPISNSMSADQLQHQ--------------------- 43
           NRKILE++Q KKQLL+  G+       +N M A QL  Q                     
Sbjct: 14  NRKILEEIQTKKQLLIGLGS------TANQMPAPQLLGQPTVTAEFVQNVSATPNAAGGI 67

Query: 44  ---RAALITANAQSTGFYITQDSSFGNIVLPVLPRYD 77
              R+A    ++ + GF+I QDS FGN  +PVLPR +
Sbjct: 68  AAPRSAFNPTSSTTLGFFIPQDSYFGNSFIPVLPRLE 104

Drosophila mojavensis (taxid: 7230)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	78
307209228	102	Uncharacterized protein C9orf80-like pro	0.987	0.754	0.532	9e-18
383854185	314	PREDICTED: methyltransferase-like protei	0.974	0.242	0.522	2e-17
328792098	314	PREDICTED: methyltransferase-like protei	0.974	0.242	0.533	4e-17
380017025	314	PREDICTED: LOW QUALITY PROTEIN: methyltr	0.974	0.242	0.533	4e-17
307191267	315	Methyltransferase-like protein 5 [Campon	0.974	0.241	0.527	8e-17
332019817	101	SOSS complex subunit C-like protein [Acr	0.974	0.752	0.522	2e-16
357617543	116	hypothetical protein KGM_12463 [Danaus p	0.987	0.663	0.457	2e-13
350401839	313	PREDICTED: methyltransferase-like protei	0.987	0.246	0.560	4e-10
340718380	314	PREDICTED: methyltransferase-like protei	0.987	0.245	0.554	6e-10
57528972	103	SOSS complex subunit C [Gallus gallus] g	0.910	0.689	0.423	1e-08

>gi|307209228|gb|EFN86335.1| Uncharacterized protein C9orf80-like protein [Harpegnathos saltator]

 Score = 94.0 bits (232), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 49/92 (53%), Positives = 65/92 (70%), Gaps = 15/92 (16%)

Query: 2   ELQNRKILEDLQMKKQLLLKQGAAPN------------SPPISNSMSADQLQ---HQRAA 46
           ELQNRKILE+LQ+KKQ+LLKQG AP+            +  IS + S+D +     QRAA
Sbjct: 10  ELQNRKILEELQLKKQMLLKQGVAPSLTSSLAVSSTGSASNISTTQSSDGIAMSASQRAA 69

Query: 47  LITANAQSTGFYITQDSSFGNIVLPVLPRYDA 78
           L  A+A S G+++TQDSSFGN++LPVLPR+D+
Sbjct: 70  LHNAHAASFGYFVTQDSSFGNLILPVLPRFDS 101

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383854185|ref|XP_003702602.1| PREDICTED: methyltransferase-like protein 5-like [Megachile rotundata]

 Score = 92.8 bits (229), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 47/90 (52%), Positives = 59/90 (65%), Gaps = 14/90 (15%)

Query: 2  ELQNRKILEDLQMKKQLLLKQGAAP--------------NSPPISNSMSADQLQHQRAAL 47
          E+QNRKILE+LQ+KKQ+LLKQG  P              N PP   S        QRAAL
Sbjct: 10 EVQNRKILEELQLKKQMLLKQGVVPTLNTSLAVTSTGSSNLPPTQTSDGVAMSASQRAAL 69

Query: 48 ITANAQSTGFYITQDSSFGNIVLPVLPRYD 77
            A+A S+G+++TQDSSFGN++LPVLPR+D
Sbjct: 70 HNAHAASSGYFVTQDSSFGNLILPVLPRFD 99

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328792098|ref|XP_001121923.2| PREDICTED: methyltransferase-like protein 5-like [Apis mellifera]

 Score = 92.0 bits (227), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 48/90 (53%), Positives = 64/90 (71%), Gaps = 14/90 (15%)

Query: 2  ELQNRKILEDLQMKKQLLLKQGAAP--NSPPISNSMSADQL------------QHQRAAL 47
          ELQNRKILE+LQ+KKQ+LLKQG AP  N+  ++++ S   L              QRAAL
Sbjct: 10 ELQNRKILEELQLKKQMLLKQGVAPTLNTSLVTSTGSPSNLPSTQPSDGVAMSASQRAAL 69

Query: 48 ITANAQSTGFYITQDSSFGNIVLPVLPRYD 77
            A+A S+G+++TQDSSFGN++LPVLPR+D
Sbjct: 70 HNAHAASSGYFVTQDSSFGNLILPVLPRFD 99

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380017025|ref|XP_003692467.1| PREDICTED: LOW QUALITY PROTEIN: methyltransferase-like protein 5-like [Apis florea]

 Score = 92.0 bits (227), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 48/90 (53%), Positives = 64/90 (71%), Gaps = 14/90 (15%)

Query: 2  ELQNRKILEDLQMKKQLLLKQGAAP--NSPPISNSMSADQL------------QHQRAAL 47
          ELQNRKILE+LQ+KKQ+LLKQG AP  N+  ++++ S   L              QRAAL
Sbjct: 10 ELQNRKILEELQLKKQMLLKQGVAPTLNTSLVTSTGSPSNLPSTQPSDGVAMSASQRAAL 69

Query: 48 ITANAQSTGFYITQDSSFGNIVLPVLPRYD 77
            A+A S+G+++TQDSSFGN++LPVLPR+D
Sbjct: 70 HNAHAASSGYFVTQDSSFGNLILPVLPRFD 99

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307191267|gb|EFN74914.1| Methyltransferase-like protein 5 [Camponotus floridanus]

 Score = 90.9 bits (224), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 48/91 (52%), Positives = 64/91 (70%), Gaps = 15/91 (16%)

Query: 2   ELQNRKILEDLQMKKQLLLKQGAAP---NSPPISNSMSADQL------------QHQRAA 46
           ELQNRKILE++Q+KKQ+LLKQG AP   +S  +S++ SA  +              QRAA
Sbjct: 10  ELQNRKILEEIQLKKQMLLKQGVAPTLNSSLGVSSTGSASSIPAIQSNDGVAMSASQRAA 69

Query: 47  LITANAQSTGFYITQDSSFGNIVLPVLPRYD 77
           L  A+A S G+++TQDSSFGN++LPVLPR+D
Sbjct: 70  LHNAHAASFGYFVTQDSSFGNLILPVLPRFD 100

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332019817|gb|EGI60278.1| SOSS complex subunit C-like protein [Acromyrmex echinatior]

 Score = 89.4 bits (220), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 47/90 (52%), Positives = 62/90 (68%), Gaps = 14/90 (15%)

Query: 2  ELQNRKILEDLQMKKQLLLKQGAAP--NSPPISNSMSADQLQ------------HQRAAL 47
          ELQNRKILE+LQ+KKQ+LLKQG AP  N+  +S++ S   +               RAAL
Sbjct: 10 ELQNRKILEELQLKKQMLLKQGVAPTLNTLGVSSTGSVSNIAATQSNDGVAMTASARAAL 69

Query: 48 ITANAQSTGFYITQDSSFGNIVLPVLPRYD 77
            A+A S G+++TQDSSFGN++LPVLPR+D
Sbjct: 70 HNAHAASFGYFVTQDSSFGNLILPVLPRFD 99

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|357617543|gb|EHJ70851.1| hypothetical protein KGM_12463 [Danaus plexippus]

 Score = 79.7 bits (195), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 48/105 (45%), Positives = 62/105 (59%), Gaps = 28/105 (26%)

Query: 2   ELQNRKILEDLQMKKQLLLKQGA--------------APNS-------PPISNSMSADQL 40
           EL NRKILE+LQ+KKQ+L+KQGA              +P S       PP+S +    QL
Sbjct: 11  ELTNRKILEELQLKKQMLMKQGAVAPLTATTISLAQPSPVSQLPMCSIPPLSATAGFPQL 70

Query: 41  QH-------QRAALITANAQSTGFYITQDSSFGNIVLPVLPRYDA 78
                     RAAL  ANA S GF+++QDSSFGN +LPVLPR+++
Sbjct: 71  PEANIVNTSHRAALQHANATSWGFFVSQDSSFGNQILPVLPRFES 115

Source: Danaus plexippus

Species: Danaus plexippus

Genus: Danaus

Family: Nymphalidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350401839|ref|XP_003486277.1| PREDICTED: methyltransferase-like protein 5-like [Bombus impatiens]

 Score = 68.6 bits (166), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 51/91 (56%), Positives = 61/91 (67%), Gaps = 14/91 (15%)

Query: 2   ELQNRKILEDLQMKKQLLLKQGAAP--------------NSPPISNSMSADQLQHQRAAL 47
           ELQNRKILE+LQ+KKQLLLKQG AP              N PP   S        QRAAL
Sbjct: 10  ELQNRKILEELQLKKQLLLKQGVAPTLNTSLAVTSTGPSNLPPTQTSDGVVMNASQRAAL 69

Query: 48  ITANAQSTGFYITQDSSFGNIVLPVLPRYDA 78
             A+A S+G+++TQDSSFGN++LPVLPR+DA
Sbjct: 70  HNAHAASSGYFVTQDSSFGNLILPVLPRFDA 100

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340718380|ref|XP_003397646.1| PREDICTED: methyltransferase-like protein 5-like [Bombus terrestris]

 Score = 68.2 bits (165), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 51/92 (55%), Positives = 61/92 (66%), Gaps = 15/92 (16%)

Query: 2   ELQNRKILEDLQMKKQLLLKQGAAP---------------NSPPISNSMSADQLQHQRAA 46
           ELQNRKILE+LQ+KKQLLLKQG AP               N PP   S        QRAA
Sbjct: 10  ELQNRKILEELQLKKQLLLKQGVAPTLNTSLAVTSTGCPSNLPPTQTSDGVVMNASQRAA 69

Query: 47  LITANAQSTGFYITQDSSFGNIVLPVLPRYDA 78
           L  A+A S+G+++TQDSSFGN++LPVLPR+DA
Sbjct: 70  LHNAHAASSGYFVTQDSSFGNLILPVLPRFDA 101

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|57528972|ref|NP_001006585.1| SOSS complex subunit C [Gallus gallus] gi|82081433|sp|Q5ZJ32.1|SOSSC_CHICK RecName: Full=SOSS complex subunit C; AltName: Full=INTS3- and NABP-interacting protein; AltName: Full=Sensor of single-strand DNA complex subunit C; AltName: Full=Sensor of ssDNA subunit C; Short=SOSS-C; AltName: Full=Single-stranded DNA-binding protein-interacting protein 1; Short=SSB-interacting protein 1 gi|53133864|emb|CAG32261.1| hypothetical protein RCJMB04_21d4 [Gallus gallus]

 Score = 64.3 bits (155), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 36/85 (42%), Positives = 55/85 (64%), Gaps = 14/85 (16%)

Query: 8   ILEDLQMKKQLLLKQGAAPNSPPISNSMSADQL----------QH----QRAALITANAQ 53
           IL +LQ K++LL++  ++ N P  S +++   L          QH    Q+AAL  A+A 
Sbjct: 18  ILAELQEKRKLLMQNQSSTNHPGASIALARSPLNKDFRDHAEQQHIAAQQKAALQHAHAH 77

Query: 54  STGFYITQDSSFGNIVLPVLPRYDA 78
           S+G++ITQDS+FGN++LPVLPR +A
Sbjct: 78  SSGYFITQDSAFGNLILPVLPRLEA 102

Source: Gallus gallus

Species: Gallus gallus

Genus: Gallus

Family: Phasianidae

Order: Galliformes

Class: Aves

Phylum: Chordata

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	78
ZFIN|ZDB-GENE-040426-961	103	inip "ints3 and nabp interacti	0.705	0.533	0.564	1.1e-09
UNIPROTKB|B9EQ30	107	inip "SOSS complex subunit C"	0.705	0.514	0.548	3.6e-09
UNIPROTKB|Q5ZJ32	103	INIP "SOSS complex subunit C"	0.987	0.747	0.414	9.7e-09
UNIPROTKB|F1NAD7	104	INIP "SOSS complex subunit C"	1.0	0.75	0.378	1.2e-08
UNIPROTKB|B5KFM4	104	INIP "SOSS complex subunit C"	1.0	0.75	0.378	1.2e-08
UNIPROTKB|Q2NKT2	104	INIP "SOSS complex subunit C"	0.448	0.336	0.657	5.3e-08
UNIPROTKB|F1Q3P8	104	INIP "Uncharacterized protein"	0.448	0.336	0.657	5.3e-08
UNIPROTKB|Q9NRY2	104	INIP "SOSS complex subunit C"	0.448	0.336	0.657	5.3e-08
UNIPROTKB|F1SNA6	104	INIP "Uncharacterized protein"	0.448	0.336	0.657	5.3e-08
MGI|MGI:1913459	104	Inip "INTS3 and NABP interacti	0.448	0.336	0.657	5.3e-08

ZFIN|ZDB-GENE-040426-961 inip "ints3 and nabp interacting protein" [Danio rerio (taxid:7955)]

 Score = 140 (54.3 bits), Expect = 1.1e-09, P = 1.1e-09
 Identities = 35/62 (56%), Positives = 42/62 (67%)

Query:    23 GAA-PNSPPISNSMSADQL--QH----QRAALITANAQSTGFYITQDSSFGNIVLPVLPR 75
             GA+ P S P  N    DQ   QH    Q+AAL  A+A S+GF+ITQDSSFGN++LPVLPR
Sbjct:    39 GASIPLSRPAVNKEFRDQAEQQHIAAQQKAALQHAHAHSSGFFITQDSSFGNLILPVLPR 98

Query:    76 YD 77
              D
Sbjct:    99 LD 100

GO:0003674 "molecular_function" evidence=ND

GO:0006281 "DNA repair" evidence=IEA;ISS

GO:0070876 "SOSS complex" evidence=ISS

GO:0010212 "response to ionizing radiation" evidence=ISS

GO:0005634 "nucleus" evidence=IEA

GO:0006974 "response to DNA damage stimulus" evidence=IEA

UNIPROTKB|B9EQ30 inip "SOSS complex subunit C" [Salmo salar (taxid:8030)]

 Score = 135 (52.6 bits), Expect = 3.6e-09, P = 3.6e-09
 Identities = 34/62 (54%), Positives = 42/62 (67%)

Query:    23 GAA-PNSPPISNSMSAD--QLQH----QRAALITANAQSTGFYITQDSSFGNIVLPVLPR 75
             GA+ P S P  N    D  + QH    Q+AAL  A+A S+GF+ITQDSSFGN++LPVLPR
Sbjct:    39 GASIPLSRPALNKDFRDHAEQQHIAAQQKAALQHAHAHSSGFFITQDSSFGNLILPVLPR 98

Query:    76 YD 77
              D
Sbjct:    99 LD 100

GO:0005634 "nucleus" evidence=ISS

GO:0006281 "DNA repair" evidence=ISS

GO:0006974 "response to DNA damage stimulus" evidence=ISS

GO:0010212 "response to ionizing radiation" evidence=ISS

GO:0070876 "SOSS complex" evidence=ISS

UNIPROTKB|Q5ZJ32 INIP "SOSS complex subunit C" [Gallus gallus (taxid:9031)]

 Score = 131 (51.2 bits), Expect = 9.7e-09, P = 9.7e-09
 Identities = 34/82 (41%), Positives = 46/82 (56%)

Query:     2 ELQN-RKILEDXXXXXXXXXXXGAAPNSPPISNSMSADQLQH----QRAALITANAQSTG 56
             ELQ  RK+L              A   SP   +     + QH    Q+AAL  A+A S+G
Sbjct:    21 ELQEKRKLLMQNQSSTNHPGASIALARSPLNKDFRDHAEQQHIAAQQKAALQHAHAHSSG 80

Query:    57 FYITQDSSFGNIVLPVLPRYDA 78
             ++ITQDS+FGN++LPVLPR +A
Sbjct:    81 YFITQDSAFGNLILPVLPRLEA 102

GO:0006974 "response to DNA damage stimulus" evidence=ISS

GO:0070876 "SOSS complex" evidence=ISS

GO:0010212 "response to ionizing radiation" evidence=ISS

GO:0005634 "nucleus" evidence=ISS

GO:0006281 "DNA repair" evidence=ISS

UNIPROTKB|F1NAD7 INIP "SOSS complex subunit C" [Gallus gallus (taxid:9031)]

 Score = 130 (50.8 bits), Expect = 1.2e-08, P = 1.2e-08
 Identities = 31/82 (37%), Positives = 46/82 (56%)

Query:     1 MELQNRKILEDXXXXXXXXXXXGAAPNSPPISNSMSADQLQH----QRAALITANAQSTG 56
             ++ + RK+L              A   SP   +     + QH    Q+AAL  A+A S+G
Sbjct:    22 LDKEKRKLLMQNQSSTNHPGASIALARSPLNKDFRDHAEQQHIAAQQKAALQHAHAHSSG 81

Query:    57 FYITQDSSFGNIVLPVLPRYDA 78
             ++ITQDS+FGN++LPVLPR +A
Sbjct:    82 YFITQDSAFGNLILPVLPRLEA 103

GO:0006281 "DNA repair" evidence=IEA

GO:0010212 "response to ionizing radiation" evidence=IEA

GO:0070876 "SOSS complex" evidence=IEA

UNIPROTKB|B5KFM4 INIP "SOSS complex subunit C" [Taeniopygia guttata (taxid:59729)]

 Score = 130 (50.8 bits), Expect = 1.2e-08, P = 1.2e-08
 Identities = 31/82 (37%), Positives = 46/82 (56%)

Query:     1 MELQNRKILEDXXXXXXXXXXXGAAPNSPPISNSMSADQLQH----QRAALITANAQSTG 56
             ++ + RK+L              A   SP   +     + QH    Q+AAL  A+A S+G
Sbjct:    22 LDKEKRKLLMQNQSSTNHPGASIALTRSPLNKDFRDHAEQQHIAAQQKAALQHAHAHSSG 81

Query:    57 FYITQDSSFGNIVLPVLPRYDA 78
             ++ITQDS+FGN++LPVLPR +A
Sbjct:    82 YFITQDSAFGNLILPVLPRLEA 103

GO:0005634 "nucleus" evidence=ISS

GO:0006281 "DNA repair" evidence=ISS

GO:0006974 "response to DNA damage stimulus" evidence=ISS

GO:0010212 "response to ionizing radiation" evidence=ISS

GO:0070876 "SOSS complex" evidence=ISS

UNIPROTKB|Q2NKT2 INIP "SOSS complex subunit C" [Bos taurus (taxid:9913)]

 Score = 124 (48.7 bits), Expect = 5.3e-08, P = 5.3e-08
 Identities = 23/35 (65%), Positives = 31/35 (88%)

Query:    43 QRAALITANAQSTGFYITQDSSFGNIVLPVLPRYD 77
             Q+AAL  A+A S+G++ITQDS+FGN++LPVLPR D
Sbjct:    68 QKAALQHAHAHSSGYFITQDSAFGNLILPVLPRLD 102

GO:0006281 "DNA repair" evidence=ISS

GO:0005634 "nucleus" evidence=ISS

GO:0010212 "response to ionizing radiation" evidence=ISS

GO:0070876 "SOSS complex" evidence=ISS

GO:0006974 "response to DNA damage stimulus" evidence=ISS

UNIPROTKB|F1Q3P8 INIP "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 124 (48.7 bits), Expect = 5.3e-08, P = 5.3e-08
 Identities = 23/35 (65%), Positives = 31/35 (88%)

Query:    43 QRAALITANAQSTGFYITQDSSFGNIVLPVLPRYD 77
             Q+AAL  A+A S+G++ITQDS+FGN++LPVLPR D
Sbjct:    68 QKAALQHAHAHSSGYFITQDSAFGNLILPVLPRLD 102

GO:0070876 "SOSS complex" evidence=IEA

GO:0010212 "response to ionizing radiation" evidence=IEA

GO:0006281 "DNA repair" evidence=IEA

UNIPROTKB|Q9NRY2 INIP "SOSS complex subunit C" [Homo sapiens (taxid:9606)]

 Score = 124 (48.7 bits), Expect = 5.3e-08, P = 5.3e-08
 Identities = 23/35 (65%), Positives = 31/35 (88%)

Query:    43 QRAALITANAQSTGFYITQDSSFGNIVLPVLPRYD 77
             Q+AAL  A+A S+G++ITQDS+FGN++LPVLPR D
Sbjct:    68 QKAALQHAHAHSSGYFITQDSAFGNLILPVLPRLD 102

GO:0010212 "response to ionizing radiation" evidence=IMP

GO:0005634 "nucleus" evidence=IDA

GO:0006974 "response to DNA damage stimulus" evidence=IMP

GO:0070876 "SOSS complex" evidence=IDA

GO:0006281 "DNA repair" evidence=IMP

GO:0005515 "protein binding" evidence=IPI

GO:0005730 "nucleolus" evidence=IDA

UNIPROTKB|F1SNA6 INIP "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 124 (48.7 bits), Expect = 5.3e-08, P = 5.3e-08
 Identities = 23/35 (65%), Positives = 31/35 (88%)

Query:    43 QRAALITANAQSTGFYITQDSSFGNIVLPVLPRYD 77
             Q+AAL  A+A S+G++ITQDS+FGN++LPVLPR D
Sbjct:    68 QKAALQHAHAHSSGYFITQDSAFGNLILPVLPRLD 102

GO:0070876 "SOSS complex" evidence=IEA

GO:0010212 "response to ionizing radiation" evidence=IEA

GO:0006281 "DNA repair" evidence=IEA

MGI|MGI:1913459 Inip "INTS3 and NABP interacting protein" [Mus musculus (taxid:10090)]

 Score = 124 (48.7 bits), Expect = 5.3e-08, P = 5.3e-08
 Identities = 23/35 (65%), Positives = 31/35 (88%)

Query:    43 QRAALITANAQSTGFYITQDSSFGNIVLPVLPRYD 77
             Q+AAL  A+A S+G++ITQDS+FGN++LPVLPR D
Sbjct:    68 QKAALQHAHAHSSGYFITQDSAFGNLILPVLPRLD 102

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISO

GO:0006281 "DNA repair" evidence=ISO

GO:0006974 "response to DNA damage stimulus" evidence=ISO

GO:0010212 "response to ionizing radiation" evidence=ISO

GO:0070876 "SOSS complex" evidence=ISO

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q2NKT2	SOSSC_BOVIN	No assigned EC number	0.4235	0.8974	0.6730	yes	N/A
B5KFM4	SOSSC_TAEGU	No assigned EC number	0.4069	0.9102	0.6826	yes	N/A
Q9NRY2	SOSSC_HUMAN	No assigned EC number	0.4235	0.8974	0.6730	yes	N/A
Q7ZV26	SOSSC_DANRE	No assigned EC number	0.4819	0.8974	0.6796	yes	N/A
Q5ZJ32	SOSSC_CHICK	No assigned EC number	0.4235	0.9102	0.6893	yes	N/A
Q3TXT3	SOSSC_MOUSE	No assigned EC number	0.4117	0.8974	0.6730	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	78
pfam06597	449	pfam06597, Clostridium_P47, Clostridium P-47 prote	0.001

>gnl|CDD|219100 pfam06597, Clostridium_P47, Clostridium P-47 protein

 Score = 35.1 bits (81), Expect = 0.001
 Identities = 13/40 (32%), Positives = 18/40 (45%)

Query: 36  SADQLQHQRAALITANAQSTGFYITQDSSFGNIVLPVLPR 75
            +  LQHQ          S GF I++     N++LP LP 
Sbjct: 216 ISKLLQHQIDPNAIPENSSAGFLISEQLFLKNVLLPGLPS 255

This family consists of several P-47 proteins from various Clostridium species as well as two related sequences from Pseudomonas putida. The function of this family is unknown. Length = 449

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

No hit with probability above 80.00

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00