Psyllid ID: psy5554

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270--
Protein Sequence
MPPIVAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPKSKRGAQENASRSENEPCLVKIKFTPNL
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEccccccccccccccccccccEEcccccccc
Coil and Loop (DISEMBL)
mppivapistkglrncntgglglrncntgglglrncntgglglrncntgglglrncntgglglrncntgglglrncntgglglrncntgglglrncntgglglrncntgglglrncntgglglrncntgglglrncntgglglrncntgglglrncntgglglrncntgglglrncntgglglrncntgglglrncntgglglrncntgglglrncntgglglrncntgglglrncntgglivpkskrgaqenasrsenepclvkikftpnl
Flexible Loop (DISEMBL)
mppivapistkglrncntgglglrncntgglGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPKSkrgaqenasrsenepclvkikftpnl
Low Complexity Region (SEG)
MPPIVAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPKSKRGAQENASRSENEPCLVKIKFTPNL
Disordered region (IsUnstruct)
*********TKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIV*****************************
Disordered Region (DISOPRED)
*PPIVAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPKSKRGAQENASRSENEPCLVK**F****
Disordered Region (DISEMBL)
MPPIVAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPK**************EPCLVKIKFTPNL
Disordered Region (DISPRO)
MPPIVAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPKS*************EPCLVKIKFTPNL
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MPPIVAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPKSKRGAQENASRSENEPCLVKIKFTPNL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	272	2.2.26 [Sep-21-2011]
Q6C908	1634	Actin cytoskeleton-regula	yes	N/A	0.477	0.079	0.303	9e-08
Q6MWY2	2523	Uncharacterized PPE famil	no	N/A	0.566	0.061	0.345	2e-06
Q52118	295	Uncharacterized protein i	N/A	N/A	0.772	0.711	0.246	1e-05
Q8ILR9	4662	Protein PF14_0175 OS=Plas	no	N/A	0.783	0.045	0.157	1e-05
Q79FL2	1053	Uncharacterized PPE famil	no	N/A	0.742	0.191	0.363	3e-05
Q79FS0	618	Uncharacterized PPE famil	no	N/A	0.845	0.372	0.287	0.0009

>sp|Q6C908|PAN1_YARLI Actin cytoskeleton-regulatory complex protein PAN1 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=PAN1 PE=3 SV=1

 Score = 57.8 bits (138), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 41/135 (30%), Positives = 71/135 (52%), Gaps = 5/135 (3%)

Query: 124 RNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGL-GLRNCNTGGLGLRNCNTGG 180
           +   TG   ++  +TG     ++   TGG+ L+   TG +  L+  +TG   L++  TGG
Sbjct: 374 QQQATGYQPMQQQSTGYPMQAMQPQITGGMPLQQQRTGPMQPLQQQSTGYAPLQSQLTGG 433

Query: 181 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 240
             L++  TGG  L++  TGG  L++  TGG  L+  +TG   L+  +TG   L+  +TG 
Sbjct: 434 APLQSQLTGGAPLQSQLTGGAPLQSQLTGGAPLQQQSTGYAPLQQQSTGYAPLQQQSTG- 492

Query: 241 LIVPKSKRGAQENAS 255
             +P+ + G Q  ++
Sbjct: 493 -YMPQQQTGMQPQST 506

Component of the PAN1 actin cytoskeleton-regulatory complex required for the internalization of endosomes during actin-coupled endocytosis. The complex links the site of endocytosis to the cell membrane-associated actin cytoskeleton. Mediates uptake of external molecules and vacuolar degradation of plasma membrane proteins. Plays a role in the proper organization of the cell membrane-associated actin cytoskeleton and promotes its destabilization.
Yarrowia lipolytica (strain CLIB 122 / E 150) (taxid: 284591)

>sp|Q6MWY2|PPE54_MYCTU Uncharacterized PPE family protein PPE54 OS=Mycobacterium tuberculosis GN=ppe54 PE=3 SV=1

 Score = 53.5 bits (127), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 55/159 (34%), Positives = 71/159 (44%), Gaps = 5/159 (3%)

Query: 89   GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 146
            G +G  N  +   GL N   G +G  N  +G  G+GL   N  G G  N  +G +GL N 
Sbjct: 1439 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 1498

Query: 147  NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 203
             TG +G  N  TG  G+ N  +   G+ N      GL N    NTG +   + NTG    
Sbjct: 1499 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 1558

Query: 204  RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
               NTGG    + NTG L   + NTG     + NTG  I
Sbjct: 1559 GQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFI 1597

Mycobacterium tuberculosis (taxid: 1773)

>sp|Q52118|YMO3_ERWST Uncharacterized protein in mobD 3'region OS=Erwinia stewartii PE=4 SV=1

 Score = 50.4 bits (119), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 53/215 (24%), Positives = 67/215 (31%)

Query: 16  CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 75
            N  G+ L + +  G  L + N     L + N     L   N     L         L N
Sbjct: 67  INLKGVNLSDTDLKGAYLSDANLSDADLSDANLSDANLSGANLAHANLTMAYLSEADLSN 126

Query: 76  CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 135
            N  G  L N N     L N N  G  L + N     L   +     L N +     L N
Sbjct: 127 ANLSGADLTNANLNQTDLPNVNLSGANLAHANLTMAYLSEADLSNANLSNADLKRADLSN 186

Query: 136 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 195
            N  G  L N N     L N N  G  L + N     L   +     L N +     L +
Sbjct: 187 ANLSGADLTNANLNQTDLPNVNLSGANLAHANLTMAYLSEADLSNANLSNADLKRADLSD 246

Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 230
            N     L N +     L N    G  L + N  G
Sbjct: 247 ANLSDANLTNVDLKRADLSNAILKGANLLHINVEG 281

Erwinia stewartii (taxid: 66271)

>sp|Q8ILR9|YPF17_PLAF7 Protein PF14_0175 OS=Plasmodium falciparum (isolate 3D7) GN=PF14_0175 PE=4 SV=1

 Score = 50.4 bits (119), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 34/216 (15%), Positives = 71/216 (32%), Gaps = 3/216 (1%)

Query: 42   GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 101
             L   N   +G+   N   +G+   N   +G+   N   +G+   N   + +   N   +
Sbjct: 3932 SLNQPNINNVGMNQPNINNVGMNQPNINNVGMNQPNINNVGMNQPNINNVSMNQPNINNV 3991

Query: 102  GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 161
             +   N   + +   N     +   NT    +   +T    +   +T    +   +T   
Sbjct: 3992 NMNQPNINNVSMNQPNINNFSMNQSNTNNFNMNKPSTSSFSMNQPSTNNFSMNKSSTNNF 4051

Query: 162  GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 221
             +   +     +   +T    +   +T        +T    +   N   + +   NT  +
Sbjct: 4052 SINQTSANNFSMHQPSTNNFSMNKPSTNNFSTNKPSTNNFSMNQPNINNISMNQPNTNNV 4111

Query: 222  GLRNCNTGGLGLRNCNTGGLIVPK---SKRGAQENA 254
             + N N    G+ + N    I  +   SK+   ENA
Sbjct: 4112 HMNNLNMNQSGMNHTNMTSPIFNQSNSSKQSVNENA 4147

Plasmodium falciparum (isolate 3D7) (taxid: 36329)

>sp|Q79FL2|PPE24_MYCTU Uncharacterized PPE family protein PPE24 OS=Mycobacterium tuberculosis GN=ppe24 PE=3 SV=1

 Score = 49.3 bits (116), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 77/212 (36%), Positives = 91/212 (42%), Gaps = 10/212 (4%)

Query: 23  LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 82
           L N     LG  N  +G  G  N  +  LG  N   G LG  N   G LG  N NTG   
Sbjct: 226 LANIGNANLGNYNFGSGNFGNSNIGSASLGNNNIGFGNLGSNNVGVGNLG--NLNTG--- 280

Query: 83  LRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 140
             N   G  G  N   N  G+GL   N  G+G  N  TG  GL N  +G +G  N   G 
Sbjct: 281 FANTGLGNFGFGNTGNNNIGIGLTGNNQIGIGGLNSGTGNFGLFNSGSGNVGFFNSGNGN 340

Query: 141 LGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 197
            G+ N    NTGG    + NTG     + NTG L + N NTG L   + N G     + N
Sbjct: 341 FGIGNSGNFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDFNPGSSN 400

Query: 198 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 229
           TG     N NTG L   N NTG   + + N G
Sbjct: 401 TGTFNTGNANTGFLNAGNINTGVFNIGHMNNG 432

Mycobacterium tuberculosis (taxid: 1773)

>sp|Q79FS0|PPE16_MYCTU Uncharacterized PPE family protein PPE16 OS=Mycobacterium tuberculosis GN=ppe16 PE=3 SV=1

 Score = 44.3 bits (103), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 74/257 (28%), Positives = 91/257 (35%), Gaps = 27/257 (10%)

Query: 17  NTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLG 72
           N G       N G   + + N G   +G  N     LG+ N     LG+ N   N  G+G
Sbjct: 290 NVGSFNFGTANAGSFNVGSANHGSPNVGFANLGNNNLGIANLGNNNLGIANLGNNNIGIG 349

Query: 73  LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTG 129
           L   N  G+G  N   G LG  N     +GL N     +G  N      G  N    NTG
Sbjct: 350 LTGDNMIGIGALNSGIGNLGFGNSGNNNIGLFNSGNNNIGFFNSGDSNFGFFNSGDTNTG 409

Query: 130 -------GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTG 179
                    G  N  +G  G  N      G  N     +G+ N    NTG       NTG
Sbjct: 410 FGNAGFTNTGFGNAGSGNFGFGNAGNNNFGFGNSGFENMGVGNSGAYNTGSFNSGTLNTG 469

Query: 180 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----------GLGLRNCNTGGLGLRNCNTG 229
            L   + NTG     + NTGG    + NTG            G  N  TG  G  N    
Sbjct: 470 DLNSGDFNTGWANSGDINTGGFHSGDLNTGFGSPVDQPVMNSGFGNIGTGNSGFNNSGDA 529

Query: 230 GLGLRNCNTGGLIVPKS 246
             G +N NTG   +  S
Sbjct: 530 NSGFQNTNTGAFFIGHS 546

Mycobacterium tuberculosis (taxid: 1773)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	272
440906263	154	hypothetical protein M91_19203, partial	0.558	0.987	0.401	3e-39
156408239	301	predicted protein [Nematostella vectensi	0.867	0.784	0.365	1e-33
395503012	1709	PREDICTED: X-linked retinitis pigmentosa	0.841	0.133	0.259	2e-32
260819543	697	hypothetical protein BRAFLDRAFT_85244 [B	0.812	0.317	0.186	3e-29
301619196	441	PREDICTED: hypothetical protein LOC10048	0.852	0.526	0.188	2e-27
156339202	239	hypothetical protein NEMVEDRAFT_v1g66646	0.823	0.937	0.264	5e-27
156402770	156	predicted protein [Nematostella vectensi	0.569	0.993	0.316	7e-24
407641927	1183	histidine kinase [Nocardia brasiliensis	0.871	0.200	0.34	1e-23
156388151	188	predicted protein [Nematostella vectensi	0.691	1.0	0.388	4e-22
426252498	1786	PREDICTED: LOW QUALITY PROTEIN: EH domai	0.834	0.127	0.303	6e-22

>gi|440906263|gb|ELR56546.1| hypothetical protein M91_19203, partial [Bos grunniens mutus]

 Score =  167 bits (424), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 61/152 (40%), Positives = 106/152 (69%)

Query: 13  LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 72
           LR+C+T  + LR+C+T  + LR+C+T  + LR+C+T  + LR+C+T  + LR+C+T  + 
Sbjct: 3   LRDCHTKYVRLRDCHTKYVRLRDCHTKYVRLRDCHTKYVRLRDCHTKYVRLRDCHTKYVR 62

Query: 73  LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 132
           LR+C+T  + LR+C+T  + LR+C+T  + LR+C+T  + LR+C+T  + LR+C+T  + 
Sbjct: 63  LRDCHTKYVRLRDCHTKYVRLRDCHTKYVRLRDCHTKYVRLRDCHTKYVRLRDCHTKYVR 122

Query: 133 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 164
           LR+C+T  + LR+C+T  + LR+C+T  +  R
Sbjct: 123 LRDCHTKYVRLRDCHTKYIRLRDCHTKYVRQR 154

Source: Bos grunniens mutus

Species: Bos grunniens

Genus: Bos

Family: Bovidae

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|156408239|ref|XP_001641764.1| predicted protein [Nematostella vectensis] gi|156228904|gb|EDO49701.1| predicted protein [Nematostella vectensis]

 Score =  149 bits (376), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 90/246 (36%), Positives = 115/246 (46%), Gaps = 10/246 (4%)

Query: 3   PIVAPISTK--GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 60
           P + P+ T+  G R  +T   GLR  +T    LR  +T   GLR  +T    LR  +T  
Sbjct: 47  PRLRPLDTEQPGYRPQDTEQPGLRPLDTEQPRLRPQDTEQPGLRPLDTEQPRLRPLDTEQ 106

Query: 61  LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--------LGLRNCNTGGLGLRNCNTGGLG 112
            GLR  +T   GLR  +T   GLR  +TG          GLR  +TG  GLR  +T    
Sbjct: 107 PGLRPLDTEQPGLRPLDTEQPGLRPLDTGKCRPLDTEKPGLRPLDTGQPGLRPLDTEQPR 166

Query: 113 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 172
           LR  +T   G R  +T   GLR  +T   GLR  +T   GLR  +T    LR  +T   G
Sbjct: 167 LRPLDTEQPGHRPLDTEQPGLRPLDTEQPGLRPLDTEQPGLRPLDTEQPILRPLDTEQPG 226

Query: 173 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 232
           LR  +T    LR  +T    LR  +T   GLR  NT   GLR  +T   GLR  +T   G
Sbjct: 227 LRPLDTEQPRLRPLDTEQPRLRPLDTKQPGLRPLNTKQPGLRPLDTEQPGLRPLDTEQPG 286

Query: 233 LRNCNT 238
           LR  +T
Sbjct: 287 LRPLDT 292

Source: Nematostella vectensis

Species: Nematostella vectensis

Genus: Nematostella

Family: Edwardsiidae

Order: Actiniaria

Class: Anthozoa

Phylum: Cnidaria

Superkingdom: Eukaryota

>gi|395503012|ref|XP_003755867.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-interacting protein 1 [Sarcophilus harrisii]

 Score =  145 bits (365), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 62/239 (25%), Positives = 90/239 (37%), Gaps = 10/239 (4%)

Query: 12   GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 71
             + NC    L L + +   L + N N     + NC    L L NC+     L NC    L
Sbjct: 1202 SIENCEETKLSLEDYDEAKLAIENYNEEKERVENCKEAKLSLENCDEEEQSLANCEEAKL 1261

Query: 72   GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN---- 127
             L + +   L + NC+     L NC+   L L NC+     + NC+   L L NC+    
Sbjct: 1262 SLEDYDEAKLAIENCDEENKSLENCDKAKLSLENCDEVEQFIENCDEAKLSLENCDKATE 1321

Query: 128  ---TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 184
                  L L NC+       N     L L NC+     +  C+     L N +   L L 
Sbjct: 1322 NGEEAKLSLENCDKAT---ENGEEAKLSLENCDEEEQSIEICDEEKQSLENSDKAKLSLE 1378

Query: 185  NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIV 243
            NC+     + NC    L L N     L + N +   L + N +     + N     L+V
Sbjct: 1379 NCDEEEQSIENCGEAKLRLENFEDDNLSIENSDEAKLPIENRDEEKDSIENDKEMPLLV 1437

Source: Sarcophilus harrisii

Species: Sarcophilus harrisii

Genus: Sarcophilus

Family: Dasyuridae

Order: Dasyuromorphia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|260819543|ref|XP_002605096.1| hypothetical protein BRAFLDRAFT_85244 [Branchiostoma floridae] gi|229290426|gb|EEN61106.1| hypothetical protein BRAFLDRAFT_85244 [Branchiostoma floridae]

 Score =  135 bits (339), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 43/231 (18%), Positives = 127/231 (54%)

Query: 13  LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 72
           +++C + G  +++C + G  + +C + G  +++C + G  + +C + G  + +C + G  
Sbjct: 192 IKDCYSSGACIKDCYSSGACIEDCYSSGACIKDCYSSGACITDCYSSGACIEDCYSSGAC 251

Query: 73  LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 132
           ++   + G  +++C + G  +++C + G  +++C +    + +C + G  + +C + G  
Sbjct: 252 IKARYSSGACIKDCYSSGACIKDCYSSGACIKDCCSSRACITDCYSSGACIEDCYSSGAC 311

Query: 133 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 192
           ++   + G  +++C + G  +++C + G  +++C + G  +++C + G  +++C + G  
Sbjct: 312 IKARYSSGACIKDCYSSGACIKDCYSSGACIKDCYSSGACIKDCYSSGACIKDCYSSGAC 371

Query: 193 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIV 243
             +C + G  +++C + G  +++C + G  +++C + G  +++C + G  +
Sbjct: 372 KTDCYSSGACIKDCYSSGACIKDCYSSGACIKDCYSSGACIKDCYSSGACI 422

Source: Branchiostoma floridae

Species: Branchiostoma floridae

Genus: Branchiostoma

Family: Branchiostomidae

Phylum: Chordata

Superkingdom: Eukaryota

>gi|301619196|ref|XP_002938987.1| PREDICTED: hypothetical protein LOC100487312 [Xenopus (Silurana) tropicalis]

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 44/234 (18%), Positives = 130/234 (55%)

Query: 13  LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 72
           +++ NT  + +++ NT  + +++ NT  + +++ NT  + L++ NT  + +++ NT  + 
Sbjct: 55  VQDTNTKDILVQDTNTKDILVQDTNTVDILVQDTNTIDIFLQDTNTMDILVQDTNTMDIL 114

Query: 73  LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 132
           +++ NT    +++ N   + + + NT  + +++ NT    +++ N   + + + NT  + 
Sbjct: 115 VQDTNTVDTLMQDTNIVDILVHDTNTVDILVQDTNTVDTLMQDTNIVDILVHDTNTMDIL 174

Query: 133 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 192
           +++ NT  + +++ NT  + +++ NT  + +++ NT  + +++ NT  + +++ N   + 
Sbjct: 175 VQDANTVDILVQDANTMDILVQDTNTMDILVQDTNTVDILVQDTNTVDILVQDTNIVDIL 234

Query: 193 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPKS 246
           + + NT  + +++ NT    +++ N   + + + NT  + +++ NT  ++V  +
Sbjct: 235 VHDTNTVDILVQDTNTVDTLMQDTNIVDILVHDTNTVDILVQDTNTMDILVQDT 288

Source: Xenopus (Silurana) tropicalis

Species: Xenopus (Silurana) tropicalis

Genus: Xenopus

Family: Pipidae

Order: Anura

Class: Amphibia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|156339202|ref|XP_001620110.1| hypothetical protein NEMVEDRAFT_v1g66646 [Nematostella vectensis] gi|156204499|gb|EDO28010.1| predicted protein [Nematostella vectensis]

 Score =  127 bits (319), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 62/234 (26%), Positives = 101/234 (43%), Gaps = 10/234 (4%)

Query: 13  LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 72
            R C+   +  R C+   + LR C+   + L  C+   + LR C+   + LR C    + 
Sbjct: 1   FRMCSVCSVHFRMCSVCSVHLRMCSVRSVHLPMCSVCSVHLRMCSVCSVHLRMCGVRSVH 60

Query: 73  LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 132
           L  C+   + LR C+   + LR C+   + LR C+   + LR C+   + LR C+   + 
Sbjct: 61  LPMCSACSVHLRMCSVCSVHLRMCSACSVHLRMCSACSVHLRMCSACSVHLRMCSACSVH 120

Query: 133 LRNCNTGGLGLRNCNTGGLGLRNC----------NTGGLGLRNCNTGGLGLRNCNTGGLG 182
           LR C+   + LR C+   + LR C          +   + LR C+   + LR C    + 
Sbjct: 121 LRMCSVCSVDLRMCSVCSVHLRMCGACSVHFHMFSACSVHLRMCSACSVHLRKCGACSVH 180

Query: 183 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
            R  +   + LR C+   + LR C    + LR C    +  R C    + LR C
Sbjct: 181 FRMFSACSVHLRMCSVCSVHLRMCGVCSVHLRMCGACSVHFRMCGACSVHLRMC 234

Source: Nematostella vectensis

Species: Nematostella vectensis

Genus: Nematostella

Family: Edwardsiidae

Order: Actiniaria

Class: Anthozoa

Phylum: Cnidaria

Superkingdom: Eukaryota

>gi|156402770|ref|XP_001639763.1| predicted protein [Nematostella vectensis] gi|156226893|gb|EDO47700.1| predicted protein [Nematostella vectensis]

 Score =  117 bits (292), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 49/155 (31%), Positives = 79/155 (50%)

Query: 20  GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 79
            LGL+  +   LGL+  +   LGL+  +   LGL+  +   LGL+  +   LGL+  +  
Sbjct: 2   ALGLQYLSLPALGLQYLSLPALGLQYLSLPALGLQYLSLPALGLQYLSLPALGLQYLSLP 61

Query: 80  GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 139
            LGL+  +   LGL+  +   LGL+  +   LGL+  +   LGLR  +   LGL+  +  
Sbjct: 62  ALGLQYLSLPALGLQYLSLPALGLQYLSLPALGLQYLSLPALGLRYLSLPALGLQYLSLP 121

Query: 140 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 174
            LGL+  +   LGL+  +   LGL+  +   LGL+
Sbjct: 122 ALGLQYLSLPALGLQYLSLPALGLQYLSLPALGLQ 156

Source: Nematostella vectensis

Species: Nematostella vectensis

Genus: Nematostella

Family: Edwardsiidae

Order: Actiniaria

Class: Anthozoa

Phylum: Cnidaria

Superkingdom: Eukaryota

>gi|407641927|ref|YP_006805686.1| histidine kinase [Nocardia brasiliensis ATCC 700358] gi|407304811|gb|AFT98711.1| histidine kinase [Nocardia brasiliensis ATCC 700358]

 Score =  116 bits (290), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 85/250 (34%), Positives = 113/250 (45%), Gaps = 13/250 (5%)

Query: 19   GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN-----CNTGGLGLRNCNTGGLGL 73
            GGL  R     GL  R    GGL  R  N GGL  R          GL  R+ N GGL  
Sbjct: 759  GGLPQRQRGENGLPQRESAAGGLPQREPNAGGLPPRQGPNGLPQREGLPPRDPNAGGLPQ 818

Query: 74   RN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 131
            R     + GL  R     GL  R  ++ GL  R    GGL  R   +GGL  R+ +  GL
Sbjct: 819  RPSAAPSPGLPQREAGANGLPQREPSS-GLPQREPGAGGLPQRESASGGLPQRDPSASGL 877

Query: 132  GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 191
              R     GL  R  ++ GL  R+ + GGL  R    GGL  R  ++ GL  R+ + GGL
Sbjct: 878  PQRAAGASGLPQREPSS-GLPQRDPSAGGLPQRESAAGGLPQREPSS-GLPQRDPSAGGL 935

Query: 192  GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPKSKRGAQ 251
              R+ ++ GL  R+ +   L  R+ NTGGL  R+     L  R   TG   +P+ + G+Q
Sbjct: 936  PQRDSSSSGLPQRDPSGDVLPQRDSNTGGLPSRHAAATSLPQRETPTG---LPQRQPGSQ 992

Query: 252  ENASRSENEP 261
               +  + EP
Sbjct: 993  VPPNLPQREP 1002

Source: Nocardia brasiliensis ATCC 700358

Species: Nocardia brasiliensis

Genus: Nocardia

Family: Nocardiaceae

Order: Actinomycetales

Class: Actinobacteria

Phylum: Actinobacteria

Superkingdom: Bacteria

>gi|156388151|ref|XP_001634565.1| predicted protein [Nematostella vectensis] gi|156221649|gb|EDO42502.1| predicted protein [Nematostella vectensis]

 Score =  111 bits (277), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 73/188 (38%), Positives = 73/188 (38%)

Query: 18  TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 77
           T   G  NC     G  NC T   G  NC T   G   C T   G  NC T   G  NC 
Sbjct: 1   THEYGWNNCCIHEYGWNNCCTHEYGWNNCCTHEYGWNICCTHEYGWNNCCTHEYGWNNCC 60

Query: 78  TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 137
           T   G  NC T   G  NC T   G  NC T   G  NC T   G  NC T   G  NC 
Sbjct: 61  THEYGWNNCCTHEYGWNNCCTHEYGWNNCCTHEYGWNNCCTHEYGWNNCCTHEYGWNNCC 120

Query: 138 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 197
           T   G  NC T   G  NC T   G  NC T   G  NC T   G  NC T   G  NC 
Sbjct: 121 THEYGWNNCCTHEYGWNNCCTHEYGWNNCCTHEYGWNNCCTHEYGWNNCCTHEYGWNNCC 180

Query: 198 TGGLGLRN 205
           T   G  N
Sbjct: 181 THEYGWNN 188

Source: Nematostella vectensis

Species: Nematostella vectensis

Genus: Nematostella

Family: Edwardsiidae

Order: Actiniaria

Class: Anthozoa

Phylum: Cnidaria

Superkingdom: Eukaryota

>gi|426252498|ref|XP_004019948.1| PREDICTED: LOW QUALITY PROTEIN: EH domain-binding protein 1-like protein 1 [Ovis aries]

 Score =  110 bits (275), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 69/227 (30%), Positives = 80/227 (35%)

Query: 14   RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 73
            R    GG G    +T  L  R    GG G    +T  L  R    GG G    +T  L  
Sbjct: 841  RETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRP 900

Query: 74   RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 133
            R    GG G    +T  L  R    GG G    +T  L  R    GG G    +T  L  
Sbjct: 901  RETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRP 960

Query: 134  RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 193
            R    GG G    +T  L  R    GG G    +T  L  R    GG G    +T  L  
Sbjct: 961  RETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRP 1020

Query: 194  RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 240
            R    GG G    +T  L  R    GG G    +T  L  R    GG
Sbjct: 1021 RETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRPRETEVGG 1067

Source: Ovis aries

Species: Ovis aries

Genus: Ovis

Family: Bovidae

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	272
UNIPROTKB|Q6MWX9	3157	PPE55 "PPE FAMILY PROTEIN" [My	0.849	0.073	0.375	3e-30
WB|WBGene00001599	974	glh-2 [Caenorhabditis elegans	0.856	0.239	0.360	3.1e-30
UNIPROTKB|Q966L9	974	glh-2 "ATP-dependent RNA helic	0.856	0.239	0.360	3.1e-30
UNIPROTKB|Q79FL2	1053	ppe24 "Uncharacterized PPE fam	0.849	0.219	0.352	2.5e-26
UNIPROTKB|Q79FI9	1459	PPE34 "Uncharacterized protein	0.801	0.149	0.358	2.1e-24
UNIPROTKB|Q6MWY2	2523	ppe54 "Uncharacterized PPE fam	0.819	0.088	0.351	3.3e-24
UNIPROTKB|Q6MX48	963	PPE6 "PPE family protein" [Myc	0.731	0.206	0.328	7.4e-23
UNIPROTKB|Q79FW4	645	ppe12 "Uncharacterized PPE fam	0.816	0.344	0.317	4.6e-20
UNIPROTKB|P42611	487	ppe10 "Uncharacterized PPE fam	0.794	0.443	0.309	1.6e-18
ZFIN|ZDB-GENE-061212-2	2054	elnb "elastin b" [Danio rerio	0.779	0.103	0.339	5e-16

UNIPROTKB|Q6MWX9 PPE55 "PPE FAMILY PROTEIN" [Mycobacterium tuberculosis H37Rv (taxid:83332)]

 Score = 352 (129.0 bits), Expect = 3.0e-30, P = 3.0e-30
 Identities = 90/240 (37%), Positives = 104/240 (43%)

Query:     8 ISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRN 65
             + +  L   N G + L   N G L L   N GG  LGL N   G +G  N   G +G  N
Sbjct:  1387 VGSYNLGFANVGDVNLGAGNLGNLNLGGGNLGGQNLGLGNLGDGNVGFGNLGHGNVGFGN 1446

Query:    66 CNTGGL-GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 124
                G L G+ N   G  G  N   G +GL N   G  G  N    G+GL   N  G G  
Sbjct:  1447 SGLGALPGIGNIGLGNAGSNNVGFGNMGLGNIGFGNTGTNNL---GIGLTGDNQTGFGGL 1503

Query:   125 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 184
             N   G LGL N  TG +G  N  TG  GL N  +   G+ N  TG  GL N  +   GL 
Sbjct:  1504 NSGAGNLGLFNSGTGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTGSTGLFNAGSFNTGLA 1563

Query:   185 NC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
             N    NTG L   N NTGG    N NTG     + NTGG    N NTG     + N G L
Sbjct:  1564 NAGSYNTGSLNAGNTNTGGFNPGNVNTGWFNAGHTNTGGFNTGNVNTGAFNSGSFNNGAL 1623

GO:0052556 "positive regulation by symbiont of host immune response" evidence=IDA

WB|WBGene00001599 glh-2 [Caenorhabditis elegans (taxid:6239)]

 Score = 345 (126.5 bits), Expect = 3.1e-30, P = 3.1e-30
 Identities = 87/241 (36%), Positives = 107/241 (44%)

Query:    19 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 78
             GG G  + NTGG G  + N GG G  + N GG G    N  G    N N GG G  + N 
Sbjct:    26 GGSGFGSGNTGGFG--SGNAGGTGFGSSNNGGSGFGGNNNVGPRFGNGNAGGTGFGSGNA 83

Query:    79 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 138
             GG G  + N GG G  + N GG G  + N GG G    N GG G  + N GG GL + N 
Sbjct:    84 GGTGFGSGNAGGTGFGSGNAGGTGFGSGNAGGTGFGGGNAGGTGFGSGNAGGTGLGSGNA 143

Query:   139 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 198
             GG G  + N GG G  + N GG G  +   GG G  +   GG G    +  G G  +  T
Sbjct:   144 GGTGFGSGNAGGTGFGSGNAGGTGFGSGKAGGTGFGSGKAGGTGFGGNSNSGSGFGSGLT 203

Query:   199 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPKSKRGAQENASRSE 258
              G G  N +  G G     +GG G  N    G G    N+ G     S  G Q+   R+ 
Sbjct:   204 NGFGSGNNHESGFG--GGKSGGFGGGNSGGSGFGSGG-NSNGF---GSGGGGQDRGERNN 257

Query:   259 N 259
             N
Sbjct:   258 N 258

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0008026 "ATP-dependent helicase activity" evidence=IEA

GO:0004386 "helicase activity" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0016787 "hydrolase activity" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0006915 "apoptotic process" evidence=IMP

GO:0009791 "post-embryonic development" evidence=IMP

GO:0007281 "germ cell development" evidence=IMP

GO:0016070 "RNA metabolic process" evidence=ISS

GO:0043186 "P granule" evidence=IDA

GO:0003724 "RNA helicase activity" evidence=IDA

GO:0008432 "JUN kinase binding" evidence=IPI

GO:0043621 "protein self-association" evidence=IPI

UNIPROTKB|Q966L9 glh-2 "ATP-dependent RNA helicase glh-2" [Caenorhabditis elegans (taxid:6239)]

 Score = 345 (126.5 bits), Expect = 3.1e-30, P = 3.1e-30
 Identities = 87/241 (36%), Positives = 107/241 (44%)

Query:    19 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 78
             GG G  + NTGG G  + N GG G  + N GG G    N  G    N N GG G  + N 
Sbjct:    26 GGSGFGSGNTGGFG--SGNAGGTGFGSSNNGGSGFGGNNNVGPRFGNGNAGGTGFGSGNA 83

Query:    79 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 138
             GG G  + N GG G  + N GG G  + N GG G    N GG G  + N GG GL + N 
Sbjct:    84 GGTGFGSGNAGGTGFGSGNAGGTGFGSGNAGGTGFGGGNAGGTGFGSGNAGGTGLGSGNA 143

Query:   139 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 198
             GG G  + N GG G  + N GG G  +   GG G  +   GG G    +  G G  +  T
Sbjct:   144 GGTGFGSGNAGGTGFGSGNAGGTGFGSGKAGGTGFGSGKAGGTGFGGNSNSGSGFGSGLT 203

Query:   199 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPKSKRGAQENASRSE 258
              G G  N +  G G     +GG G  N    G G    N+ G     S  G Q+   R+ 
Sbjct:   204 NGFGSGNNHESGFG--GGKSGGFGGGNSGGSGFGSGG-NSNGF---GSGGGGQDRGERNN 257

Query:   259 N 259
             N
Sbjct:   258 N 258

GO:0005515 "protein binding" evidence=IPI

UNIPROTKB|Q79FL2 ppe24 "Uncharacterized PPE family protein PPE24" [Mycobacterium tuberculosis (taxid:1773)]

 Score = 309 (113.8 bits), Expect = 2.5e-26, P = 2.5e-26
 Identities = 86/244 (35%), Positives = 104/244 (42%)

Query:     1 MPPIVAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 60
             +P +    +   L   N GG  + N N G   L N     LG  N  +G  G  N  +  
Sbjct:   197 IPALAGGPTAINLGIANVGGGNVGNANNG---LANIGNANLGNYNFGSGNFGNSNIGSAS 253

Query:    61 LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNT 118
             LG  N   G LG  N   G LG  N NTG    GL N   G  G  N    G+GL   N 
Sbjct:   254 LGNNNIGFGNLGSNNVGVGNLG--NLNTGFANTGLGNFGFGNTGNNNI---GIGLTGNNQ 308

Query:   119 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 175
              G+G  N  TG  GL N  +G +G  N   G  G+ N    NTGG    + NTG     +
Sbjct:   309 IGIGGLNSGTGNFGLFNSGSGNVGFFNSGNGNFGIGNSGNFNTGGWNSGHGNTGFFNAGS 368

Query:   176 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 235
              NTG L + N NTG L   + N G     + NTG     N NTG L   N NTG   + +
Sbjct:   369 FNTGMLDVGNANTGSLNTGSYNMGDFNPGSSNTGTFNTGNANTGFLNAGNINTGVFNIGH 428

Query:   236 CNTG 239
              N G
Sbjct:   429 MNNG 432

GO:0040007 "growth" evidence=IMP

UNIPROTKB|Q79FI9 PPE34 "Uncharacterized protein" [Mycobacterium tuberculosis H37Rv (taxid:83332)]

 Score = 293 (108.2 bits), Expect = 2.1e-24, P = 2.1e-24
 Identities = 85/237 (35%), Positives = 106/237 (44%)

Query:    17 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN- 75
             N G L L N N   LG  N  +G +G  N  +G +G  +   G +G  N   G +G  N 
Sbjct:   809 NDGTLNLGNAN---LGDYNVGSGNVGSYNFGSGNIGNGSFGFGNIGSNNFGFGNVGSNNL 865

Query:    76 --CNTG-GL--GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNT 128
                NTG GL   L N   G +G  N      G  N   G +G  N  TG  G+GL   N 
Sbjct:   866 GFANTGPGLTEALHNIGFGNIGGNN-----YGFANIGNGNIGFGNTGTGNIGIGLTGDNQ 920

Query:   129 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 185
              G G  N  +G +G  N   G +G  N   G +G+ N    NTG   + N NTG     N
Sbjct:   921 VGFGALNSGSGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTGN 980

Query:   186 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
              NTG     + NTG     + NTG L   N NTG L L + NTG   + + NTG LI
Sbjct:   981 VNTGIGNAGSYNTGSYNAGDTNTGDLNPGNANTGYLNLGDLNTGWGNIGDLNTGALI 1037

GO:0005576 "extracellular region" evidence=IDA

GO:0052553 "modulation by symbiont of host immune response" evidence=IDA

UNIPROTKB|Q6MWY2 ppe54 "Uncharacterized PPE family protein PPE54" [Mycobacterium tuberculosis (taxid:1773)]

 Score = 294 (108.6 bits), Expect = 3.3e-24, P = 3.3e-24
 Identities = 84/239 (35%), Positives = 105/239 (43%)

Query:    21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCN- 77
             +GL N   G +GL N     LG  N   GG  +   N GG  +GL N   G +GL N   
Sbjct:  1374 VGLSNLGGGNVGLGNVGDFNLGAGN--VGGFNVGGGNIGGNNVGLGNVGFGNVGLANSGL 1431

Query:    78 TGGL-GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLR 134
             T GL GL     G +G  N  +   GL N   G +G  N  +G  G+GL   N  G G  
Sbjct:  1432 TPGLMGL-----GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGF 1486

Query:   135 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGL 191
             N  +G +GL N  TG +G  N  TG  G+ N  +   G+ N      GL N    NTG +
Sbjct:  1487 NTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVV 1546

Query:   192 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPKSKRGA 250
                + NTG       NTGG    + NTG L   + NTG     + NTG  I      GA
Sbjct:  1547 NAGSYNTGSFNAGQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFISGNYSNGA 1605

GO:0040007 "growth" evidence=IMP

GO:0052170 "negative regulation by symbiont of host innate immune response" evidence=IDA

UNIPROTKB|Q6MX48 PPE6 "PPE family protein" [Mycobacterium tuberculosis H37Rv (taxid:83332)]

 Score = 276 (102.2 bits), Expect = 7.4e-23, P = 7.4e-23
 Identities = 67/204 (32%), Positives = 87/204 (42%)

Query:    51 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 110
             LGL N     +G  N     +G  N  +  LG  N  +  LGL N     +G  N  +  
Sbjct:   200 LGLANVGANNVGNGNVGVFNVGFGNLGSYNLGFANLGSDNLGLANLGGHNIGFANTGSNN 259

Query:   111 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 168
             +G  N  +  +G+     G +G  + N+G   +GL N  +G +GL N  TG  G+ N  T
Sbjct:   260 VGFGNTGSNNVGIGLTGNGQIGFGSFNSGSHNIGLFNSGSGNVGLFNSGTGNFGIGNSGT 319

Query:   169 GGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 225
             G  GL N    NTG     + NTGG    + NTG     N NTG     N NTG     +
Sbjct:   320 GNFGLGNTGSTNTGWFNTGDVNTGGFNPGSYNTGNFNTGNYNTGSFNAGNYNTGYFNTGD 379

Query:   226 CNTGGLGLRNCNTGGLIVPKSKRG 249
              NTG     N NTG  I      G
Sbjct:   380 YNTGVANTGNVNTGAFIAGNYSNG 403

GO:0005618 "cell wall" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

UNIPROTKB|Q79FW4 ppe12 "Uncharacterized PPE family protein PPE12" [Mycobacterium tuberculosis (taxid:1773)]

 Score = 247 (92.0 bits), Expect = 4.6e-20, P = 4.6e-20
 Identities = 72/227 (31%), Positives = 91/227 (40%)

Query:     8 ISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC- 66
             +S+  +     G +G+ N   G  G  N     +GL N   G +G  N  +   G  N  
Sbjct:   290 MSSPAVPTPGNGNVGIGNGGNGNFGGGNTGNANIGLGNVGDGNVGFGNSGSYNFGFGNTG 349

Query:    67 -NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLG 122
              N  G+GL   N  G G  N  +G +G  N  TG +G  N  +G  G+ N    NTG   
Sbjct:   350 NNNIGIGLTGSNQIGFGGLNSGSGNIGFGNSGTGNIGFFNSGSGNFGVGNSGVTNTGVAN 409

Query:   123 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 182
               N NTG       NTG     + NTG       NTG     + NTG       NTG   
Sbjct:   410 SGNINTGFGNSGFINTGFGNALSVNTGFGNSGQANTGIGNAGDFNTGNFNGGIINTGSFN 469

Query:   183 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 229
                 N+G     + N+G L     NTG     N NTGG    N NTG
Sbjct:   470 SGAFNSGSFNGGDANSGFLNSGLTNTGFANSGNINTGGFNAGNLNTG 516

GO:0040007 "growth" evidence=IMP

UNIPROTKB|P42611 ppe10 "Uncharacterized PPE family protein PPE10" [Mycobacterium tuberculosis (taxid:1773)]

 Score = 230 (86.0 bits), Expect = 1.6e-18, P = 1.6e-18
 Identities = 72/233 (30%), Positives = 96/233 (41%)

Query:    12 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG-- 69
             G  N  +G +G  N     +G  N  TG +G  N  +G LGL N   G +G  N  +G  
Sbjct:   191 GFGNTGSGNIGNNNIGNNNIGSGNTGTGNIGSGNTGSGNLGLGNLGDGNIGFGNTGSGNI 250

Query:    70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 129
             G G+   +  G G  N  +G +G  N  TG +GL N  +G +G+ N  +G L   N   G
Sbjct:   251 GFGITGDHQMGFGGFNSGSGNIGFGNSGTGNVGLFNSGSGNIGIGN--SGSL---NSGIG 305

Query:   130 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL-GLRNCNTGGLGLRNCNTGGLGLRNCNT 188
               G  N   G  G  N +    G++N   G   G         G     TGG+     ++
Sbjct:   306 TSGTINAGLGSAGSLNTSFWNAGMQNAALGSAAGSEAALVSSAGYA---TGGMSTAALSS 362

Query:   189 GGLGLRNCNTGGL--GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
             G L     +TGGL  GL N    GL     NT      +   GGL   N N G
Sbjct:   363 GILASALGSTGGLQHGLANVLNSGL----TNTPVAAPASAPVGGLDSGNPNPG 411

GO:0042783 "active evasion of host immune response" evidence=IMP

ZFIN|ZDB-GENE-061212-2 elnb "elastin b" [Danio rerio (taxid:7955)]

 Score = 216 (81.1 bits), Expect = 5.0e-16, P = 5.0e-16
 Identities = 77/227 (33%), Positives = 96/227 (42%)

Query:    12 GLRNCNTGGLGLR-NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 70
             GL    TG  G+R     GGLG      GGLG     TGGLG     TG   ++   TGG
Sbjct:    86 GLGGLGTG-TGIRPGTGAGGLGGIGPGGGGLGTGGLGTGGLGTAGLGTGPF-VKPPKTGG 143

Query:    71 LG-LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG-GLGLRNCNTG--GLGLRNC 126
              G L     GG G+     GGLGLR    G  GL     G G G+    TG   +G+   
Sbjct:   144 YGGLPGIGAGGTGV---GLGGLGLRPAGPGVGGLVPGGFGVGTGVGGTGTGVPAIGV-GT 199

Query:   127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRN-CNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 185
               GGLG+     GG G+     GG   +   +TGG+G      GG+       GG+G   
Sbjct:   200 GVGGLGIGGVGPGGAGI---GVGGKPPKTGVSTGGIGPGGVVPGGIRPGGIVPGGVGPGG 256

Query:   186 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 232
                GG+G      GG+G      GG+G      GG+G      GG+G
Sbjct:   257 IVPGGVGPGGIFPGGVGPGGIVPGGVGPGGIVPGGVGPGGIVPGGVG 303

GO:0008150 "biological_process" evidence=ND

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	272
COG1357	238	COG1357, COG1357, Pentapeptide repeats containing	2e-06
COG1357	238	COG1357, COG1357, Pentapeptide repeats containing	2e-05
COG1357	238	COG1357, COG1357, Pentapeptide repeats containing	4e-05

>gnl|CDD|224276 COG1357, COG1357, Pentapeptide repeats containing protein [Function unknown]

 Score = 47.6 bits (113), Expect = 2e-06
 Identities = 64/218 (29%), Positives = 69/218 (31%), Gaps = 14/218 (6%)

Query: 14  RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR-NCNTGGLG 72
            N     L       G L   N N  GL L   N  G  L N N  G  L    +  G  
Sbjct: 27  ANLLGADLQGSELQLGDLNFENANLSGLDLSGANLSGADLSNANLRGADLSKGADLSGAD 86

Query: 73  LRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 129
           L   N  G  L   N  G  L N    N  G  L   N     L N N  G  L   N  
Sbjct: 87  LEGANLRGANLSGANLSGANLSNATRANLSGADLSGAN-----LSNANLTGANLSGANLN 141

Query: 130 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 189
           G  L N N  G  L   +     L   +  G  L   +  G  L   N  G  LRN N  
Sbjct: 142 GANLSNANLSGADLSGAD-----LSGADLSGANLSGADLRGANLSGANLSGADLRNANLS 196

Query: 190 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 227
           G  L   +  G  L N N GG  L   N  G  L    
Sbjct: 197 GADLSGADLTGANLVNANLGGANLFGANLLGADLSGAT 234

Length = 238

>gnl|CDD|224276 COG1357, COG1357, Pentapeptide repeats containing protein [Function unknown]

 Score = 44.9 bits (106), Expect = 2e-05
 Identities = 60/204 (29%), Positives = 66/204 (32%), Gaps = 14/204 (6%)

Query: 8   ISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR-NCNTGGLGLRNCNTGGLGLRNC 66
           +      N N  GL L   N  G  L N N  G  L    +  G  L   N  G  L   
Sbjct: 41  LGDLNFENANLSGLDLSGANLSGADLSNANLRGADLSKGADLSGADLEGANLRGANLSGA 100

Query: 67  NTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 123
           N  G  L N    N  G  L   N     L N N  G  L   N  G  L N N  G  L
Sbjct: 101 NLSGANLSNATRANLSGADLSGAN-----LSNANLTGANLSGANLNGANLSNANLSGADL 155

Query: 124 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 183
              +     L   +  G  L   +  G  L   N  G  LRN N  G  L   +  G  L
Sbjct: 156 SGAD-----LSGADLSGANLSGADLRGANLSGANLSGADLRNANLSGADLSGADLTGANL 210

Query: 184 RNCNTGGLGLRNCNTGGLGLRNCN 207
            N N GG  L   N  G  L    
Sbjct: 211 VNANLGGANLFGANLLGADLSGAT 234

Length = 238

>gnl|CDD|224276 COG1357, COG1357, Pentapeptide repeats containing protein [Function unknown]

 Score = 43.7 bits (103), Expect = 4e-05
 Identities = 53/181 (29%), Positives = 57/181 (31%), Gaps = 14/181 (7%)

Query: 64  RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR-NCNTGGLG 122
            N     L       G L   N N  GL L   N  G  L N N  G  L    +  G  
Sbjct: 27  ANLLGADLQGSELQLGDLNFENANLSGLDLSGANLSGADLSNANLRGADLSKGADLSGAD 86

Query: 123 LRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 179
           L   N  G  L   N  G  L N    N  G  L   N     L N N  G  L   N  
Sbjct: 87  LEGANLRGANLSGANLSGANLSNATRANLSGADLSGAN-----LSNANLTGANLSGANLN 141

Query: 180 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
           G  L N N  G  L   +     L   +  G  L   +  G  L   N  G  LRN N  
Sbjct: 142 GANLSNANLSGADLSGAD-----LSGADLSGANLSGADLRGANLSGANLSGADLRNANLS 196

Query: 240 G 240
           G
Sbjct: 197 G 197

Length = 238

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	272
PRK15196	350	secreted effector protein PipB2; Provisional	82.93

>PRK15196 secreted effector protein PipB2; Provisional

Probab=82.93  E-value=5.5  Score=36.53  Aligned_cols=7  Identities=14%  Similarity=0.411  Sum_probs=2.5

Q ss_pred             CCCcccc
Q psy5554          31 LGLRNCN   37 (272)
Q Consensus        31 ~~LR~C~   37 (272)
                      ..|+...
T Consensus       152 ~~L~ga~  158 (350)
T PRK15196        152 MNLKGAV  158 (350)
T ss_pred             ccccCCc
Confidence            3333333

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	272
2w7z_A	214	EFSQNR, pentapeptide repeat family protein; glutar	3e-09
2w7z_A	214	EFSQNR, pentapeptide repeat family protein; glutar	3e-09
2w7z_A	214	EFSQNR, pentapeptide repeat family protein; glutar	3e-09
2w7z_A	214	EFSQNR, pentapeptide repeat family protein; glutar	3e-09
2w7z_A	214	EFSQNR, pentapeptide repeat family protein; glutar	5e-09
2w7z_A	214	EFSQNR, pentapeptide repeat family protein; glutar	1e-08
2w7z_A	214	EFSQNR, pentapeptide repeat family protein; glutar	2e-08
3pss_A	216	QNR; pentapeptide repeat, antibiotic resistance, D	6e-07

>2w7z_A EFSQNR, pentapeptide repeat family protein; glutaraldehyde, gyrase inhibitor, cyclic pentylation, chemic modification; HET: LP6; 1.60A {Enterococcus faecalis} Length = 214

 Score = 54.9 bits (132), Expect = 3e-09
 Identities = 23/181 (12%), Positives = 37/181 (20%), Gaps = 15/181 (8%)

Query: 13  LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 72
           L N     + L N     L  R+         + +       + +   +    C+     
Sbjct: 32  LENHLYQQIDLPNQEVRNLVFRDAV-----FDHLSLANGQFASFDCSNVRFEACD----- 81

Query: 73  LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 132
             N                    CN  G    +         +C       R  N   + 
Sbjct: 82  FSNVEWLSGSFHRVT-----FLRCNLTGTNFADSYLXDCLFEDCXADYASFRFANFNLVH 136

Query: 133 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 192
                             L L  C+       N +  GL         L        GL 
Sbjct: 137 FNQTRLVESEFFEVTWXXLLLEACDLTESNWLNTSLXGLDFSQNTFERLTFSPNYLSGLX 196

Query: 193 L 193
           +
Sbjct: 197 V 197

>2w7z_A EFSQNR, pentapeptide repeat family protein; glutaraldehyde, gyrase inhibitor, cyclic pentylation, chemic modification; HET: LP6; 1.60A {Enterococcus faecalis} Length = 214

 Score = 54.9 bits (132), Expect = 3e-09
 Identities = 23/181 (12%), Positives = 37/181 (20%), Gaps = 15/181 (8%)

Query: 23  LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 82
           L N     + L N     L  R+         + +       + +   +    C+     
Sbjct: 32  LENHLYQQIDLPNQEVRNLVFRDAV-----FDHLSLANGQFASFDCSNVRFEACD----- 81

Query: 83  LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 142
             N                    CN  G    +         +C       R  N   + 
Sbjct: 82  FSNVEWLSGSFHRVT-----FLRCNLTGTNFADSYLXDCLFEDCXADYASFRFANFNLVH 136

Query: 143 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 202
                             L L  C+       N +  GL         L        GL 
Sbjct: 137 FNQTRLVESEFFEVTWXXLLLEACDLTESNWLNTSLXGLDFSQNTFERLTFSPNYLSGLX 196

Query: 203 L 203
           +
Sbjct: 197 V 197

>2w7z_A EFSQNR, pentapeptide repeat family protein; glutaraldehyde, gyrase inhibitor, cyclic pentylation, chemic modification; HET: LP6; 1.60A {Enterococcus faecalis} Length = 214

 Score = 54.9 bits (132), Expect = 3e-09
 Identities = 23/181 (12%), Positives = 37/181 (20%), Gaps = 15/181 (8%)

Query: 33  LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 92
           L N     + L N     L  R+         + +       + +   +    C+     
Sbjct: 32  LENHLYQQIDLPNQEVRNLVFRDAV-----FDHLSLANGQFASFDCSNVRFEACD----- 81

Query: 93  LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 152
             N                    CN  G    +         +C       R  N   + 
Sbjct: 82  FSNVEWLSGSFHRVT-----FLRCNLTGTNFADSYLXDCLFEDCXADYASFRFANFNLVH 136

Query: 153 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 212
                             L L  C+       N +  GL         L        GL 
Sbjct: 137 FNQTRLVESEFFEVTWXXLLLEACDLTESNWLNTSLXGLDFSQNTFERLTFSPNYLSGLX 196

Query: 213 L 213
           +
Sbjct: 197 V 197

>2w7z_A EFSQNR, pentapeptide repeat family protein; glutaraldehyde, gyrase inhibitor, cyclic pentylation, chemic modification; HET: LP6; 1.60A {Enterococcus faecalis} Length = 214

 Score = 54.9 bits (132), Expect = 3e-09
 Identities = 23/181 (12%), Positives = 37/181 (20%), Gaps = 15/181 (8%)

Query: 53  LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 112
           L N     + L N     L  R+         + +       + +   +    C+     
Sbjct: 32  LENHLYQQIDLPNQEVRNLVFRDAV-----FDHLSLANGQFASFDCSNVRFEACD----- 81

Query: 113 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 172
             N                    CN  G    +         +C       R  N   + 
Sbjct: 82  FSNVEWLSGSFHRVT-----FLRCNLTGTNFADSYLXDCLFEDCXADYASFRFANFNLVH 136

Query: 173 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 232
                             L L  C+       N +  GL         L        GL 
Sbjct: 137 FNQTRLVESEFFEVTWXXLLLEACDLTESNWLNTSLXGLDFSQNTFERLTFSPNYLSGLX 196

Query: 233 L 233
           +
Sbjct: 197 V 197

>2w7z_A EFSQNR, pentapeptide repeat family protein; glutaraldehyde, gyrase inhibitor, cyclic pentylation, chemic modification; HET: LP6; 1.60A {Enterococcus faecalis} Length = 214

 Score = 54.1 bits (130), Expect = 5e-09
 Identities = 22/178 (12%), Positives = 35/178 (19%), Gaps = 15/178 (8%)

Query: 63  LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 122
           L N     + L N     L  R+         + +       + +   +    C+     
Sbjct: 32  LENHLYQQIDLPNQEVRNLVFRDAV-----FDHLSLANGQFASFDCSNVRFEACD----- 81

Query: 123 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 182
             N                    CN  G    +         +C       R  N   + 
Sbjct: 82  FSNVEWLSGSFHRVT-----FLRCNLTGTNFADSYLXDCLFEDCXADYASFRFANFNLVH 136

Query: 183 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 240
                             L L  C+       N +  GL         L        G
Sbjct: 137 FNQTRLVESEFFEVTWXXLLLEACDLTESNWLNTSLXGLDFSQNTFERLTFSPNYLSG 194

>2w7z_A EFSQNR, pentapeptide repeat family protein; glutaraldehyde, gyrase inhibitor, cyclic pentylation, chemic modification; HET: LP6; 1.60A {Enterococcus faecalis} Length = 214

 Score = 53.0 bits (127), Expect = 1e-08
 Identities = 19/168 (11%), Positives = 39/168 (23%)

Query: 6   APISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 65
           A +     +  +     +RN         + +       + +   +    C+   +   +
Sbjct: 30  AILENHLYQQIDLPNQEVRNLVFRDAVFDHLSLANGQFASFDCSNVRFEACDFSNVEWLS 89

Query: 66  CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 125
            +   +    CN  G    +         +C       R  N   +              
Sbjct: 90  GSFHRVTFLRCNLTGTNFADSYLXDCLFEDCXADYASFRFANFNLVHFNQTRLVESEFFE 149

Query: 126 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 173
                L L  C+       N +  GL         L        GL +
Sbjct: 150 VTWXXLLLEACDLTESNWLNTSLXGLDFSQNTFERLTFSPNYLSGLXV 197

>2w7z_A EFSQNR, pentapeptide repeat family protein; glutaraldehyde, gyrase inhibitor, cyclic pentylation, chemic modification; HET: LP6; 1.60A {Enterococcus faecalis} Length = 214

 Score = 52.2 bits (125), Expect = 2e-08
 Identities = 22/179 (12%), Positives = 36/179 (20%), Gaps = 16/179 (8%)

Query: 73  LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 132
           L N     + L N     L  R+         + +       + +   +    C+     
Sbjct: 32  LENHLYQQIDLPNQEVRNLVFRDAV-----FDHLSLANGQFASFDCSNVRFEACD----- 81

Query: 133 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 192
             N                    CN  G    +         +C       R  N   + 
Sbjct: 82  FSNVEWLSGSFHRVT-----FLRCNLTGTNFADSYLXDCLFEDCXADYASFRFANFNLVH 136

Query: 193 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPKSK-RGA 250
                             L L  C+       N +  GL         L    +   G 
Sbjct: 137 FNQTRLVESEFFEVTWXXLLLEACDLTESNWLNTSLXGLDFSQNTFERLTFSPNYLSGL 195

>3pss_A QNR; pentapeptide repeat, antibiotic resistance, DNA topoisomeras cell cycle; HET: MLY; 2.00A {Aeromonas hydrophila} PDB: 3psz_A Length = 216

 Score = 48.2 bits (115), Expect = 6e-07
 Identities = 38/209 (18%), Positives = 59/209 (28%), Gaps = 6/209 (2%)

Query: 43  LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN-TGGL 101
           + +    G+     +  G   + C         CN   L L  C        +       
Sbjct: 2   IXDXCFEGVRFEQQDLEGEQFQGCR-----FIGCNFSWLDLAECRFVDCSFYDRESEQSC 56

Query: 102 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 161
            L+ C+        C+            GL LR+C   G+     +              
Sbjct: 57  LLQGCDLREASFLRCDLTMADCSRSQCLGLELRDCQALGINFSRASFANQITVXSYFCEA 116

Query: 162 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 221
            L   N        C      L      G  L   +  G  L     G +   + N  G 
Sbjct: 117 HLTGNNFSYANFEGCLLEQCELSGNRWQGANLFGASLAGSDLSGSEFGQIDWASVNLQGC 176

Query: 222 GLRNCNTGGLGLRNCNTGGLIVPKSKRGA 250
            LR C+  GL LR  N  G+ + + ++ A
Sbjct: 177 DLRQCDLPGLDLRRVNLDGVQINEDQQQA 205

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	272
3du1_X	257	ALL3740 protein, HETL; right-handed beta helix, re	91.4

>3du1_X ALL3740 protein, HETL; right-handed beta helix, repeated five residue fold, pentape repeat protein, structural protein; 2.00A {Nostoc SP}

Probab=91.40  E-value=4.1  Score=31.63  Aligned_cols=16  Identities=31%  Similarity=0.582  Sum_probs=7.5

Q ss_pred             CccccccCCCceeeeC
Q psy5554         230 GLGLRNCNTGGLIVPK  245 (272)
Q Consensus       230 glglrncntgglivpk  245 (272)
                      |.-|.+.+--|.++|.
T Consensus       237 ga~l~~a~l~ga~~~~  252 (257)
T 3du1_X          237 GAILKDAELKGAIMPD  252 (257)
T ss_dssp             TCBCTTCBCTTCBCTT
T ss_pred             CCEeCCCcccccCCCC
Confidence            3334444445555543

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00