Psyllid ID: psy6131
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 225 | ||||||
| 345487243 | 2706 | PREDICTED: hypothetical protein LOC10011 | 0.968 | 0.080 | 0.816 | 1e-111 | |
| 383857295 | 1646 | PREDICTED: uncharacterized protein LOC10 | 0.968 | 0.132 | 0.816 | 1e-111 | |
| 340722271 | 1697 | PREDICTED: hypothetical protein LOC10064 | 0.991 | 0.131 | 0.802 | 1e-111 | |
| 350416717 | 1697 | PREDICTED: hypothetical protein LOC10074 | 0.991 | 0.131 | 0.802 | 1e-110 | |
| 380029496 | 1865 | PREDICTED: uncharacterized protein LOC10 | 0.968 | 0.116 | 0.807 | 1e-110 | |
| 307188349 | 1632 | Protein TET2 [Camponotus floridanus] | 0.968 | 0.133 | 0.811 | 1e-110 | |
| 328780619 | 1695 | PREDICTED: hypothetical protein LOC41287 | 0.968 | 0.128 | 0.807 | 1e-110 | |
| 307213413 | 1214 | Protein TET2 [Harpegnathos saltator] | 0.968 | 0.179 | 0.811 | 1e-109 | |
| 242005152 | 1861 | hypothetical protein Phum_PHUM059340 [Pe | 0.968 | 0.117 | 0.802 | 1e-107 | |
| 357624916 | 2066 | hypothetical protein KGM_05166 [Danaus p | 0.951 | 0.103 | 0.766 | 1e-101 |
| >gi|345487243|ref|XP_001599461.2| PREDICTED: hypothetical protein LOC100114438 [Nasonia vitripennis] | Back alignment and taxonomy information |
|---|
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 178/218 (81%), Positives = 203/218 (93%)
Query: 1 ILYTGKEGKTTQGCPLAKWVIRRASLEEKLLLIVKHRQGHTCSTAWIVVVIVAWEGVPLN 60
++YTGKEGKTTQGCP+AKWVIRR+ +EEK+L IVKHRQGH C+TAWIVV +VAWEGVP +
Sbjct: 1570 VVYTGKEGKTTQGCPMAKWVIRRSGIEEKILTIVKHRQGHKCATAWIVVAMVAWEGVPNH 1629
Query: 61 QSDGVYAILTNKLNKYGLPTTRRCATNEPRTCACQGLDPDTCGASFSFGCSWSMYYNGCK 120
++D +Y++L++KLN++GLPTTRRC TNEPRTCACQGLDPDTCGASFSFGCSWSMYYNGCK
Sbjct: 1630 EADRIYSLLSHKLNRFGLPTTRRCGTNEPRTCACQGLDPDTCGASFSFGCSWSMYYNGCK 1689
Query: 121 YARSKTVRKFRLSVRSEEQEIEEKMHLLATTISPLYKALAPGAFTNQCQFEREASECRLG 180
YARSKTVRKFRLSVRSEEQE+EE+MH+LAT +SPLY +LAP AF NQ QFEREASECRLG
Sbjct: 1690 YARSKTVRKFRLSVRSEEQEVEERMHVLATLLSPLYLSLAPEAFNNQTQFEREASECRLG 1749
Query: 181 FKPGRPFSGVTACFDFCAHSHRDLHNMNNGCTVSVVLS 218
FKPGRPFSGVTAC DFCAH+HRDLHNMNNGCTV V L+
Sbjct: 1750 FKPGRPFSGVTACIDFCAHAHRDLHNMNNGCTVVVSLT 1787
|
Source: Nasonia vitripennis Species: Nasonia vitripennis Genus: Nasonia Family: Pteromalidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|383857295|ref|XP_003704140.1| PREDICTED: uncharacterized protein LOC100883443 [Megachile rotundata] | Back alignment and taxonomy information |
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| >gi|340722271|ref|XP_003399531.1| PREDICTED: hypothetical protein LOC100642293 [Bombus terrestris] | Back alignment and taxonomy information |
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| >gi|350416717|ref|XP_003491069.1| PREDICTED: hypothetical protein LOC100741227 [Bombus impatiens] | Back alignment and taxonomy information |
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| >gi|380029496|ref|XP_003698406.1| PREDICTED: uncharacterized protein LOC100866593 [Apis florea] | Back alignment and taxonomy information |
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| >gi|307188349|gb|EFN73124.1| Protein TET2 [Camponotus floridanus] | Back alignment and taxonomy information |
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| >gi|328780619|ref|XP_396330.4| PREDICTED: hypothetical protein LOC412878 [Apis mellifera] | Back alignment and taxonomy information |
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| >gi|307213413|gb|EFN88849.1| Protein TET2 [Harpegnathos saltator] | Back alignment and taxonomy information |
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| >gi|242005152|ref|XP_002423436.1| hypothetical protein Phum_PHUM059340 [Pediculus humanus corporis] gi|212506514|gb|EEB10698.1| hypothetical protein Phum_PHUM059340 [Pediculus humanus corporis] | Back alignment and taxonomy information |
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| >gi|357624916|gb|EHJ75511.1| hypothetical protein KGM_05166 [Danaus plexippus] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 225 | ||||||
| FB|FBgn0263392 | 2267 | CG43444 [Drosophila melanogast | 0.977 | 0.097 | 0.7 | 5.8e-86 | |
| UNIPROTKB|F1NJ90 | 1026 | F1NJ90 "Uncharacterized protei | 0.995 | 0.218 | 0.623 | 3.3e-79 | |
| UNIPROTKB|Q6N021 | 2002 | TET2 "Methylcytosine dioxygena | 0.995 | 0.111 | 0.623 | 9.1e-78 | |
| UNIPROTKB|E1BYY9 | 742 | E1BYY9 "Uncharacterized protei | 0.986 | 0.299 | 0.629 | 1.6e-77 | |
| UNIPROTKB|F1S116 | 2003 | TET2 "Uncharacterized protein" | 0.995 | 0.111 | 0.619 | 5.1e-77 | |
| UNIPROTKB|E1BD99 | 1965 | TET2 "Uncharacterized protein" | 0.995 | 0.113 | 0.615 | 8e-77 | |
| UNIPROTKB|F1MJY3 | 1676 | TET3 "Uncharacterized protein" | 0.986 | 0.132 | 0.620 | 1e-75 | |
| UNIPROTKB|F1SLG7 | 1759 | TET3 "Uncharacterized protein" | 0.986 | 0.126 | 0.620 | 1.2e-75 | |
| UNIPROTKB|H9L040 | 563 | TET3 "Uncharacterized protein" | 0.986 | 0.394 | 0.611 | 1.3e-75 | |
| UNIPROTKB|F1PBJ1 | 1795 | TET3 "Uncharacterized protein" | 0.986 | 0.123 | 0.620 | 1.6e-75 |
| FB|FBgn0263392 CG43444 [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 874 (312.7 bits), Expect = 5.8e-86, P = 5.8e-86
Identities = 154/220 (70%), Positives = 186/220 (84%)
Query: 1 ILYTGKEGKTTQGCPLAKWVIRRASLEEKLLLIVKHRQGHTCSTAWIVVVIVAWEGVPLN 60
I+YTGKEGKT+QGCP+AKWVIRRA LEEK+L++VK R GH C A+IVV +VAW+G+P
Sbjct: 1093 IVYTGKEGKTSQGCPVAKWVIRRADLEEKILVVVKKRPGHRCIAAYIVVCMVAWDGMPRL 1152
Query: 61 QSDGVYAILTNKLNKYGLPTTRRCATNEPRTCACQGLDPDTCGASFSFGCSWSMYYNGCK 120
++D Y L KLNKYGLPTTRRCATNE RTCACQGLDP++ GAS+SFGCSWSMYYNGCK
Sbjct: 1153 EADNAYKNLIPKLNKYGLPTTRRCATNENRTCACQGLDPESSGASYSFGCSWSMYYNGCK 1212
Query: 121 YARSKTVRKFRLSVRSEEQEIEEKMHLLATTISPLYKALAPGAFTNQCQFEREASECRLG 180
YARSKTVRKFRLSV+SEE IE+ M+L+AT ++P++K + P ++ NQ ++E EAS+CRLG
Sbjct: 1213 YARSKTVRKFRLSVKSEEAAIEDHMNLIATLLAPVFKQVCPRSYDNQTKYEHEASDCRLG 1272
Query: 181 FKPGRPFSGVTACFDFCAHSHRDLHNMNNGCTVSVVLSNP 220
+PG+PFSGVTAC DFCAHSHRDLHNM +GCTV V L P
Sbjct: 1273 LEPGKPFSGVTACLDFCAHSHRDLHNMQDGCTVHVALLKP 1312
|
|
| UNIPROTKB|F1NJ90 F1NJ90 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q6N021 TET2 "Methylcytosine dioxygenase TET2" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
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| UNIPROTKB|E1BYY9 E1BYY9 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
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| UNIPROTKB|F1S116 TET2 "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
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| UNIPROTKB|E1BD99 TET2 "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
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| UNIPROTKB|F1MJY3 TET3 "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
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| UNIPROTKB|F1SLG7 TET3 "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
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| UNIPROTKB|H9L040 TET3 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
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| UNIPROTKB|F1PBJ1 TET3 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 225 | |||
| pfam12851 | 162 | pfam12851, Tet_JBP, Oxygenase domain of the 2OGFeD | 5e-20 |
| >gnl|CDD|221808 pfam12851, Tet_JBP, Oxygenase domain of the 2OGFeDO superfamily | Back alignment and domain information |
|---|
Score = 82.8 bits (205), Expect = 5e-20
Identities = 28/107 (26%), Positives = 46/107 (42%), Gaps = 4/107 (3%)
Query: 111 SWSMYYNGCKYARSKTVRKFRLSVRSEEQEIEEKMHLLATTISPLYKALAPGAFTNQCQF 170
+ Y++G K + RK RL+ +E ++EE + LA T+S + K + P +
Sbjct: 1 GIAGYFDGRKRPGREKCRKTRLT--AESPKLEELLEELADTVSAILKVINPDLYNKLDSL 58
Query: 171 EREASECRLGFKPGRPFSGVTACFDFCAHSHRDLHNMNNGCTVSVVL 217
+ C PFS V+ + HRD + NG + V L
Sbjct: 59 LEDIGNC-KLLTEATPFSTVSVNKNRITALHRDKGDF-NGIGLLVTL 103
|
A double-stranded beta helix (DSBH) fold domain of the 2-oxoglutarate (2OG)-Fe(II)-dependent dioxygenase (2OGFeDO) superfamily found in various eukaryotes, bacteria and bacteriophages. Members of this family catalyze nucleic acid modifications, such as thymidine hydroxylation during base J synthesis in kinetoplastids, and the conversion of 5 methyl-cytosine (5-mC) to 5-hydroxymethyl-cytosine (hmC), or further oxidation to 5-formylcytosine (5fC) and 5-carboxylcytosine (5caC). Metazoan TET proteins contain a cysteine-rich region inserted into the core of the DSBH fold. Vertebrate TET proteins are oncogenes that are mutated in various myeloid cancers. Fungal and algal versions of this family are linked to a predicted transposase and show lineage-specific expansions. Length = 162 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 225 | |||
| PF12851 | 171 | Tet_JBP: Oxygenase domain of the 2OGFeDO superfami | 100.0 |
| >PF12851 Tet_JBP: Oxygenase domain of the 2OGFeDO superfamily ; InterPro: IPR024779 TETs are 2OG- and Fe(II)-dependent oxygenases that catalyse the conversion of 5 methyl-Cytosine (5-MC) to 5-hydroxymethyl-cytosine (hmC) in cultured cells and in vitro [] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-43 Score=286.62 Aligned_cols=109 Identities=50% Similarity=0.898 Sum_probs=105.8
Q ss_pred eeeeeecCceecc-ccccceeeccCchhHHHHHHHHHHHHHhHHHHHhhhCchhhhchhhhhccCCccccCCcCCCCcce
Q psy6131 111 SWSMYYNGCKYAR-SKTVRKFRLSVRSEEQEIEEKMHLLATTISPLYKALAPGAFTNQCQFEREASECRLGFKPGRPFSG 189 (225)
Q Consensus 111 sWsmY~nGcKfar-Sk~prkfrl~~~~eE~~le~~lq~LAT~laPlYk~lAP~Ay~NQv~~E~~a~dCRLG~k~gRPFSG 189 (225)
|||||||||||+| |+.||||+++.+..+ +|++||.|||.|+||||++||++|+||+++++.+.+|||+...|+||||
T Consensus 1 ~~~~y~~~~~~~r~~~~~rk~~~~~~~~~--~~~~l~~la~~l~~iy~~~~P~~y~~~~~~~~~~~~~~~~~~~~~pFs~ 78 (171)
T PF12851_consen 1 SWSMYFNGCKFPRGSKKPRKFRLTPENPK--LEENLQELATVLGPIYKQIAPDLYENQVEVEESLGDCRLGPIWGRPFSG 78 (171)
T ss_pred CeeEEeCCCCccccccccceeeccccccc--HHHHHHHHHHHHHHHHHHHCHHHHHhHHHHHhhhhhheeecccCcceec
Confidence 8999999999999 999999999997555 9999999999999999999999999999999999999999999999999
Q ss_pred ecchhhccccccccccCCCCCceEEEEecCCC
Q psy6131 190 VTACFDFCAHSHRDLHNMNNGCTVSVVLSNPD 221 (225)
Q Consensus 190 VTaClDFCAH~HrD~HNm~nG~TvVcTLtked 221 (225)
||+|+|||+|+|||+|||+||.+|||||.++|
T Consensus 79 ~sv~~nr~t~~HrD~~~~~~~~~~~~t~~~gd 110 (171)
T PF12851_consen 79 VSVISNRCTHSHRDTHNMPNGYDVLCTLGRGD 110 (171)
T ss_pred eEEEeecCccceecCCCCCCCeEEEEecCCcc
Confidence 99999999999999999999999999999964
|
Interestingly TET2 is considered as an oncogene, as it is found mutated in some types of cancer []. This entry represents the double-stranded beta helix (DSBH) fold of the 2-oxoglutarate (2OG) - Fe(II) oxygenases. DSBH comprises a part of the catalytic domain in TETS. It is found in many organisms including fruit fly, African malaria mosquito, zebrafish, mouse and human. |
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
No hit with e-value below 0.005
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00