Psyllid ID: psy6131


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-----
ILYTGKEGKTTQGCPLAKWVIRRASLEEKLLLIVKHRQGHTCSTAWIVVVIVAWEGVPLNQSDGVYAILTNKLNKYGLPTTRRCATNEPRTCACQGLDPDTCGASFSFGCSWSMYYNGCKYARSKTVRKFRLSVRSEEQEIEEKMHLLATTISPLYKALAPGAFTNQCQFEREASECRLGFKPGRPFSGVTACFDFCAHSHRDLHNMNNGCTVSVVLSNPDSLEP
ccccccccccccccHHHHHHHHHcccccEEEEEEEEcccccccccEEEEEEEEEccccccccHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccEEEEEEEccccccccccccEEEcccccHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHccccccccccccccccccEEEcccccHHHHccccccccEEEEEEcccccccc
cEEcccccccccccccEEEEEEccccHcEEEEEEEcccccccHHHEEEEEEEEHccccHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccEEEccccEEEEEccccEcccccccEEEEccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccEEEEHHHHHHHcHHHcccccccEEEEEEEccccccc
ilytgkegkttqgcplaKWVIRRASLEEKLLLIVKHrqghtcstAWIVVVIVAWegvplnqsdgVYAILTNKLnkyglpttrrcatneprtcacqgldpdtcgasfsfgcswsmyyngckyarskTVRKFRLSVRSEEQEIEEKMHLLATTISPlykalapgaftnqcqfereasecrlgfkpgrpfsgvtacfdfcahshrdlhnmnngcTVSVvlsnpdslep
ilytgkegkttqgcplakWVIRRASLEEKLLLIVKhrqghtcsTAWIVVVIVAWEGVPLNQSDGVYAILTNKLNKYGLPTTRRCATNEPRTCACQGLDPDTCGASFSFGCSWSMYYNGCKYARSKTVRKFRLSVRSEEQEIEEKMHLLATTISPLYKALAPGAFTNQCQFEREASECRLGFKPGRPFSGVTACFDFCAHSHRDLHNMNNGCTVSvvlsnpdslep
ILYTGKEGKTTQGCPLAKWVIRRASLEEKLLLIVKHRQGHTCSTAWIVVVIVAWEGVPLNQSDGVYAILTNKLNKYGLPTTRRCATNEPRTCACQGLDPDTCGASFSFGCSWSMYYNGCKYARSKTVRKFRLSVRSEEQEIEEKMHLLATTISPLYKALAPGAFTNQCQFEREASECRLGFKPGRPFSGVTACFDFCAHSHRDLHNMNNGCTVSVVLSNPDSLEP
***********QGCPLAKWVIRRASLEEKLLLIVKHRQGHTCSTAWIVVVIVAWEGVPLNQSDGVYAILTNKLNKYGLPTTRRCATNEPRTCACQGLDPDTCGASFSFGCSWSMYYNGCKYARSKTVRKFRLSVR*****IEEKMHLLATTISPLYKALAPGAFTNQCQFEREASECRLGFKPGRPFSGVTACFDFCAHSHRDLHNMNNGCTVSVVL********
**Y**************KWVIRRASLEEKLLLIVKHRQGHTCSTAWIVVVIVAWEGVPLNQSDGVYAILTNKLNKYGLPTTRRCATNEPRTCACQGLDPDTCGASFSFGCSWSMYYNGCKYARSKTVRK***********IEEKMHLLATTISPLYKALAPGAFTNQCQFEREASECRLGFKPGRPFSGVTACFDFCAHSHRDLHNMNNGCTVSVV**N******
ILYTGKEGKTTQGCPLAKWVIRRASLEEKLLLIVKHRQGHTCSTAWIVVVIVAWEGVPLNQSDGVYAILTNKLNKYGLPTTRRCATNEPRTCACQGLDPDTCGASFSFGCSWSMYYNGCKYARSKTVRKFRLS********EEKMHLLATTISPLYKALAPGAFTNQCQFEREASECRLGFKPGRPFSGVTACFDFCAHSHRDLHNMNNGCTVSVVLSNPDSLEP
ILY**KEGKTTQGCPLAKWVIRRASLEEKLLLIVKHRQGHTCSTAWIVVVIVAWEGVPLNQSDGVYAILTNKLNKYGLPTTRRCATNEPRTCACQGLDPDTCGASFSFGCSWSMYYNGCKYARSKTVRKFRLSVRSEEQEIEEKMHLLATTISPLYKALAPGAFTNQCQFEREASECRLGFKPGRPFSGVTACFDFCAHSHRDLHNMNNGCTVSVVLSNP*****
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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ILYTGKEGKTTQGCPLAKWVIRRASLEEKLLLIVKHRQGHTCSTAWIVVVIVAWEGVPLNQSDGVYAILTNKLNKYGLPTTRRCATNEPRTCACQGLDPDTCGASFSFGCSWSMYYNGCKYARSKTVRKFRLSVRSEEQEIEEKMHLLATTISPLYKALAPGAFTNQCQFEREASECRLGFKPGRPFSGVTACFDFCAHSHRDLHNMNNGCTVSVVLSNPDSLEP
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query225 2.2.26 [Sep-21-2011]
Q6N021 2002 Methylcytosine dioxygenas yes N/A 0.995 0.111 0.623 2e-85
Q8BG87 1668 Methylcytosine dioxygenas yes N/A 0.986 0.133 0.620 1e-81
O43151 1660 Methylcytosine dioxygenas no N/A 0.986 0.133 0.616 2e-81
Q8NFU7 2136 Methylcytosine dioxygenas no N/A 0.986 0.103 0.582 5e-79
Q3URK3 2007 Methylcytosine dioxygenas no N/A 0.964 0.108 0.586 8e-76
Q4JK59 1912 Methylcytosine dioxygenas no N/A 0.995 0.117 0.584 3e-75
>sp|Q6N021|TET2_HUMAN Methylcytosine dioxygenase TET2 OS=Homo sapiens GN=TET2 PE=1 SV=3 Back     alignment and function desciption
 Score =  315 bits (806), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 141/226 (62%), Positives = 175/226 (77%), Gaps = 2/226 (0%)

Query: 1    ILYTGKEGKTTQGCPLAKWVIRRASLEEKLLLIVKHRQGHTCSTAWIVVVIVAWEGVPLN 60
            ++YTGKEGK++QGCP+AKWV+RR+S EEKLL +V+ R GHTC  A IV++I+ WEG+PL+
Sbjct: 1180 VIYTGKEGKSSQGCPIAKWVVRRSSSEEKLLCLVRERAGHTCEAAVIVILILVWEGIPLS 1239

Query: 61   QSDGVYAILTNKLNKYGLPTTRRCATNEPRTCACQGLDPDTCGASFSFGCSWSMYYNGCK 120
             +D +Y+ LT  L KYG  T RRCA NE RTCACQGLDP+TCGASFSFGCSWSMYYNGCK
Sbjct: 1240 LADKLYSELTETLRKYGTLTNRRCALNEERTCACQGLDPETCGASFSFGCSWSMYYNGCK 1299

Query: 121  YARSKTVRKFRL--SVRSEEQEIEEKMHLLATTISPLYKALAPGAFTNQCQFEREASECR 178
            +ARSK  RKF+L      EE+++E  +  L+T ++P YK LAP A+ NQ ++E  A ECR
Sbjct: 1300 FARSKIPRKFKLLGDDPKEEEKLESHLQNLSTLMAPTYKKLAPDAYNNQIEYEHRAPECR 1359

Query: 179  LGFKPGRPFSGVTACFDFCAHSHRDLHNMNNGCTVSVVLSNPDSLE 224
            LG K GRPFSGVTAC DFCAH+HRDLHNM NG T+   L+  D+ E
Sbjct: 1360 LGLKEGRPFSGVTACLDFCAHAHRDLHNMQNGSTLVCTLTREDNRE 1405




Catalyzes the conversion of methylcytosine (5mC) to 5-hydroxymethylcytosine (hmC). Plays an important role in myelopoiesis. The clear function of 5-hydroxymethylcytosine (hmC) is still unclear but it may influence chromatin structure and recruit specific factors or may constitute an intermediate component in cytosine demethylation.
Homo sapiens (taxid: 9606)
EC: 1EC: .EC: 1EC: 4EC: .EC: 1EC: 1EC: .EC: nEC: 2
>sp|Q8BG87|TET3_MOUSE Methylcytosine dioxygenase TET3 OS=Mus musculus GN=Tet3 PE=1 SV=3 Back     alignment and function description
>sp|O43151|TET3_HUMAN Methylcytosine dioxygenase TET3 OS=Homo sapiens GN=TET3 PE=2 SV=3 Back     alignment and function description
>sp|Q8NFU7|TET1_HUMAN Methylcytosine dioxygenase TET1 OS=Homo sapiens GN=TET1 PE=1 SV=2 Back     alignment and function description
>sp|Q3URK3|TET1_MOUSE Methylcytosine dioxygenase TET1 OS=Mus musculus GN=Tet1 PE=1 SV=2 Back     alignment and function description
>sp|Q4JK59|TET2_MOUSE Methylcytosine dioxygenase TET2 OS=Mus musculus GN=Tet2 PE=1 SV=3 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query225
345487243 2706 PREDICTED: hypothetical protein LOC10011 0.968 0.080 0.816 1e-111
383857295 1646 PREDICTED: uncharacterized protein LOC10 0.968 0.132 0.816 1e-111
340722271 1697 PREDICTED: hypothetical protein LOC10064 0.991 0.131 0.802 1e-111
350416717 1697 PREDICTED: hypothetical protein LOC10074 0.991 0.131 0.802 1e-110
380029496 1865 PREDICTED: uncharacterized protein LOC10 0.968 0.116 0.807 1e-110
307188349 1632 Protein TET2 [Camponotus floridanus] 0.968 0.133 0.811 1e-110
328780619 1695 PREDICTED: hypothetical protein LOC41287 0.968 0.128 0.807 1e-110
307213413 1214 Protein TET2 [Harpegnathos saltator] 0.968 0.179 0.811 1e-109
242005152 1861 hypothetical protein Phum_PHUM059340 [Pe 0.968 0.117 0.802 1e-107
357624916 2066 hypothetical protein KGM_05166 [Danaus p 0.951 0.103 0.766 1e-101
>gi|345487243|ref|XP_001599461.2| PREDICTED: hypothetical protein LOC100114438 [Nasonia vitripennis] Back     alignment and taxonomy information
 Score =  407 bits (1047), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 178/218 (81%), Positives = 203/218 (93%)

Query: 1    ILYTGKEGKTTQGCPLAKWVIRRASLEEKLLLIVKHRQGHTCSTAWIVVVIVAWEGVPLN 60
            ++YTGKEGKTTQGCP+AKWVIRR+ +EEK+L IVKHRQGH C+TAWIVV +VAWEGVP +
Sbjct: 1570 VVYTGKEGKTTQGCPMAKWVIRRSGIEEKILTIVKHRQGHKCATAWIVVAMVAWEGVPNH 1629

Query: 61   QSDGVYAILTNKLNKYGLPTTRRCATNEPRTCACQGLDPDTCGASFSFGCSWSMYYNGCK 120
            ++D +Y++L++KLN++GLPTTRRC TNEPRTCACQGLDPDTCGASFSFGCSWSMYYNGCK
Sbjct: 1630 EADRIYSLLSHKLNRFGLPTTRRCGTNEPRTCACQGLDPDTCGASFSFGCSWSMYYNGCK 1689

Query: 121  YARSKTVRKFRLSVRSEEQEIEEKMHLLATTISPLYKALAPGAFTNQCQFEREASECRLG 180
            YARSKTVRKFRLSVRSEEQE+EE+MH+LAT +SPLY +LAP AF NQ QFEREASECRLG
Sbjct: 1690 YARSKTVRKFRLSVRSEEQEVEERMHVLATLLSPLYLSLAPEAFNNQTQFEREASECRLG 1749

Query: 181  FKPGRPFSGVTACFDFCAHSHRDLHNMNNGCTVSVVLS 218
            FKPGRPFSGVTAC DFCAH+HRDLHNMNNGCTV V L+
Sbjct: 1750 FKPGRPFSGVTACIDFCAHAHRDLHNMNNGCTVVVSLT 1787




Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383857295|ref|XP_003704140.1| PREDICTED: uncharacterized protein LOC100883443 [Megachile rotundata] Back     alignment and taxonomy information
>gi|340722271|ref|XP_003399531.1| PREDICTED: hypothetical protein LOC100642293 [Bombus terrestris] Back     alignment and taxonomy information
>gi|350416717|ref|XP_003491069.1| PREDICTED: hypothetical protein LOC100741227 [Bombus impatiens] Back     alignment and taxonomy information
>gi|380029496|ref|XP_003698406.1| PREDICTED: uncharacterized protein LOC100866593 [Apis florea] Back     alignment and taxonomy information
>gi|307188349|gb|EFN73124.1| Protein TET2 [Camponotus floridanus] Back     alignment and taxonomy information
>gi|328780619|ref|XP_396330.4| PREDICTED: hypothetical protein LOC412878 [Apis mellifera] Back     alignment and taxonomy information
>gi|307213413|gb|EFN88849.1| Protein TET2 [Harpegnathos saltator] Back     alignment and taxonomy information
>gi|242005152|ref|XP_002423436.1| hypothetical protein Phum_PHUM059340 [Pediculus humanus corporis] gi|212506514|gb|EEB10698.1| hypothetical protein Phum_PHUM059340 [Pediculus humanus corporis] Back     alignment and taxonomy information
>gi|357624916|gb|EHJ75511.1| hypothetical protein KGM_05166 [Danaus plexippus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query225
FB|FBgn0263392 2267 CG43444 [Drosophila melanogast 0.977 0.097 0.7 5.8e-86
UNIPROTKB|F1NJ90 1026 F1NJ90 "Uncharacterized protei 0.995 0.218 0.623 3.3e-79
UNIPROTKB|Q6N021 2002 TET2 "Methylcytosine dioxygena 0.995 0.111 0.623 9.1e-78
UNIPROTKB|E1BYY9 742 E1BYY9 "Uncharacterized protei 0.986 0.299 0.629 1.6e-77
UNIPROTKB|F1S116 2003 TET2 "Uncharacterized protein" 0.995 0.111 0.619 5.1e-77
UNIPROTKB|E1BD99 1965 TET2 "Uncharacterized protein" 0.995 0.113 0.615 8e-77
UNIPROTKB|F1MJY3 1676 TET3 "Uncharacterized protein" 0.986 0.132 0.620 1e-75
UNIPROTKB|F1SLG7 1759 TET3 "Uncharacterized protein" 0.986 0.126 0.620 1.2e-75
UNIPROTKB|H9L040 563 TET3 "Uncharacterized protein" 0.986 0.394 0.611 1.3e-75
UNIPROTKB|F1PBJ1 1795 TET3 "Uncharacterized protein" 0.986 0.123 0.620 1.6e-75
FB|FBgn0263392 CG43444 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 874 (312.7 bits), Expect = 5.8e-86, P = 5.8e-86
 Identities = 154/220 (70%), Positives = 186/220 (84%)

Query:     1 ILYTGKEGKTTQGCPLAKWVIRRASLEEKLLLIVKHRQGHTCSTAWIVVVIVAWEGVPLN 60
             I+YTGKEGKT+QGCP+AKWVIRRA LEEK+L++VK R GH C  A+IVV +VAW+G+P  
Sbjct:  1093 IVYTGKEGKTSQGCPVAKWVIRRADLEEKILVVVKKRPGHRCIAAYIVVCMVAWDGMPRL 1152

Query:    61 QSDGVYAILTNKLNKYGLPTTRRCATNEPRTCACQGLDPDTCGASFSFGCSWSMYYNGCK 120
             ++D  Y  L  KLNKYGLPTTRRCATNE RTCACQGLDP++ GAS+SFGCSWSMYYNGCK
Sbjct:  1153 EADNAYKNLIPKLNKYGLPTTRRCATNENRTCACQGLDPESSGASYSFGCSWSMYYNGCK 1212

Query:   121 YARSKTVRKFRLSVRSEEQEIEEKMHLLATTISPLYKALAPGAFTNQCQFEREASECRLG 180
             YARSKTVRKFRLSV+SEE  IE+ M+L+AT ++P++K + P ++ NQ ++E EAS+CRLG
Sbjct:  1213 YARSKTVRKFRLSVKSEEAAIEDHMNLIATLLAPVFKQVCPRSYDNQTKYEHEASDCRLG 1272

Query:   181 FKPGRPFSGVTACFDFCAHSHRDLHNMNNGCTVSVVLSNP 220
              +PG+PFSGVTAC DFCAHSHRDLHNM +GCTV V L  P
Sbjct:  1273 LEPGKPFSGVTACLDFCAHSHRDLHNMQDGCTVHVALLKP 1312




GO:0008270 "zinc ion binding" evidence=IEA
GO:0003677 "DNA binding" evidence=IEA
UNIPROTKB|F1NJ90 F1NJ90 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|Q6N021 TET2 "Methylcytosine dioxygenase TET2" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|E1BYY9 E1BYY9 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|F1S116 TET2 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|E1BD99 TET2 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|F1MJY3 TET3 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|F1SLG7 TET3 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|H9L040 TET3 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|F1PBJ1 TET3 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q8BG87TET3_MOUSE1, ., 1, 4, ., 1, 1, ., n, 20.62050.98660.1330yesN/A
Q6N021TET2_HUMAN1, ., 1, 4, ., 1, 1, ., n, 20.62380.99550.1118yesN/A

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query225
pfam12851162 pfam12851, Tet_JBP, Oxygenase domain of the 2OGFeD 5e-20
>gnl|CDD|221808 pfam12851, Tet_JBP, Oxygenase domain of the 2OGFeDO superfamily Back     alignment and domain information
 Score = 82.8 bits (205), Expect = 5e-20
 Identities = 28/107 (26%), Positives = 46/107 (42%), Gaps = 4/107 (3%)

Query: 111 SWSMYYNGCKYARSKTVRKFRLSVRSEEQEIEEKMHLLATTISPLYKALAPGAFTNQCQF 170
             + Y++G K    +  RK RL+  +E  ++EE +  LA T+S + K + P  +      
Sbjct: 1   GIAGYFDGRKRPGREKCRKTRLT--AESPKLEELLEELADTVSAILKVINPDLYNKLDSL 58

Query: 171 EREASECRLGFKPGRPFSGVTACFDFCAHSHRDLHNMNNGCTVSVVL 217
             +   C        PFS V+   +     HRD  +  NG  + V L
Sbjct: 59  LEDIGNC-KLLTEATPFSTVSVNKNRITALHRDKGDF-NGIGLLVTL 103


A double-stranded beta helix (DSBH) fold domain of the 2-oxoglutarate (2OG)-Fe(II)-dependent dioxygenase (2OGFeDO) superfamily found in various eukaryotes, bacteria and bacteriophages. Members of this family catalyze nucleic acid modifications, such as thymidine hydroxylation during base J synthesis in kinetoplastids, and the conversion of 5 methyl-cytosine (5-mC) to 5-hydroxymethyl-cytosine (hmC), or further oxidation to 5-formylcytosine (5fC) and 5-carboxylcytosine (5caC). Metazoan TET proteins contain a cysteine-rich region inserted into the core of the DSBH fold. Vertebrate TET proteins are oncogenes that are mutated in various myeloid cancers. Fungal and algal versions of this family are linked to a predicted transposase and show lineage-specific expansions. Length = 162

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 225
PF12851171 Tet_JBP: Oxygenase domain of the 2OGFeDO superfami 100.0
>PF12851 Tet_JBP: Oxygenase domain of the 2OGFeDO superfamily ; InterPro: IPR024779 TETs are 2OG- and Fe(II)-dependent oxygenases that catalyse the conversion of 5 methyl-Cytosine (5-MC) to 5-hydroxymethyl-cytosine (hmC) in cultured cells and in vitro [] Back     alignment and domain information
Probab=100.00  E-value=7.3e-43  Score=286.62  Aligned_cols=109  Identities=50%  Similarity=0.898  Sum_probs=105.8

Q ss_pred             eeeeeecCceecc-ccccceeeccCchhHHHHHHHHHHHHHhHHHHHhhhCchhhhchhhhhccCCccccCCcCCCCcce
Q psy6131         111 SWSMYYNGCKYAR-SKTVRKFRLSVRSEEQEIEEKMHLLATTISPLYKALAPGAFTNQCQFEREASECRLGFKPGRPFSG  189 (225)
Q Consensus       111 sWsmY~nGcKfar-Sk~prkfrl~~~~eE~~le~~lq~LAT~laPlYk~lAP~Ay~NQv~~E~~a~dCRLG~k~gRPFSG  189 (225)
                      |||||||||||+| |+.||||+++.+..+  +|++||.|||.|+||||++||++|+||+++++.+.+|||+...|+||||
T Consensus         1 ~~~~y~~~~~~~r~~~~~rk~~~~~~~~~--~~~~l~~la~~l~~iy~~~~P~~y~~~~~~~~~~~~~~~~~~~~~pFs~   78 (171)
T PF12851_consen    1 SWSMYFNGCKFPRGSKKPRKFRLTPENPK--LEENLQELATVLGPIYKQIAPDLYENQVEVEESLGDCRLGPIWGRPFSG   78 (171)
T ss_pred             CeeEEeCCCCccccccccceeeccccccc--HHHHHHHHHHHHHHHHHHHCHHHHHhHHHHHhhhhhheeecccCcceec
Confidence            8999999999999 999999999997555  9999999999999999999999999999999999999999999999999


Q ss_pred             ecchhhccccccccccCCCCCceEEEEecCCC
Q psy6131         190 VTACFDFCAHSHRDLHNMNNGCTVSVVLSNPD  221 (225)
Q Consensus       190 VTaClDFCAH~HrD~HNm~nG~TvVcTLtked  221 (225)
                      ||+|+|||+|+|||+|||+||.+|||||.++|
T Consensus        79 ~sv~~nr~t~~HrD~~~~~~~~~~~~t~~~gd  110 (171)
T PF12851_consen   79 VSVISNRCTHSHRDTHNMPNGYDVLCTLGRGD  110 (171)
T ss_pred             eEEEeecCccceecCCCCCCCeEEEEecCCcc
Confidence            99999999999999999999999999999964



Interestingly TET2 is considered as an oncogene, as it is found mutated in some types of cancer []. This entry represents the double-stranded beta helix (DSBH) fold of the 2-oxoglutarate (2OG) - Fe(II) oxygenases. DSBH comprises a part of the catalytic domain in TETS. It is found in many organisms including fruit fly, African malaria mosquito, zebrafish, mouse and human.


Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00