Psyllid ID: psy6842

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------19
Protein Sequence
MSGAISLQQTYMEAKFQVFFSGLKRLRSPYFDYQKSFELHGANEQSKGIMTDLKLNDMADDADTDGHRPVVSGHNRLYHHTITCLPVLPKEMDQDSDDQKDPKWLQTKTKMMIDEFTDVNEGEKELMKLWNLHVMKYGWGREKELMKLWNLHVMKYGYIVWLGDFKQGGYQPKIPLKKKQTLSVKGIHS
Secondary Structure (PSIPRED)
cccccHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccHHHHHcccccccccccccccccccccEEEcccccccccccccccccccccHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHcHHHHcccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccHHHHHHHHHHHHHHHHHHccHHccccccccccHccccccccccccEccccccccccccccHHccccccccccEEEEEccccccccccHccccccccccHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHcccEEEHHHHHHHcHcccHHHHHHHccccccccc
Coil and Loop (DISEMBL)
MSGAISLQQTYMEAKFQVFFSGlkrlrspyfdyqksfelhganeqskgimtdlklndmaddadtdghrpvvsghnrlyhhtitclpvlpkemdqdsddqkdpkwLQTKTKMMIDEFTDVNEGEKELMKLWNLHVMKYGWGREKELMKLWNLHVMKYGYIVWlgdfkqggyqpkiplkkkqtlsvkgihs
Flexible Loop (DISEMBL)
msgaislqQTYMEAKFQVFFSGLKRLRSPYFDYQKSFelhganeqskGIMTDLKLNDMADDADTDGHRPVVSGHNRLYHHTITCLPVLPKEMDQDSDDQKDPKWLQTKTKMMIDEFTDVNEGEKELMKLWNLHVMKYGWGREKELMKLWNLHVMKYGYIVWLGDFKQGGYQPkiplkkkqtlsvkgihs
Low Complexity Region (SEG)
MSGAISLQQTYMEAKFQVFFSGLKRLRSPYFDYQKSFELHGANEQSKGIMTDLKLNDMADDADTDGHRPVVSGHNRLYHHTITCLPVLPKEMDQDSDDQKDPKWLQTKTKMMIDEFTDVNEGEKELMKLWNLHVMKYGWGREKELMKLWNLHVMKYGYIVWLGDFKQGGYQPKIPLKKKQTLSVKGIHS
Disordered region (IsUnstruct)
********QTYMEAKFQVFFSGLKRLRSPYFDYQKSFELH*****************************VVSGHNRLYHHTITCLPVL*********************KMMIDEFTDVNEGEKELMKLWNLHVMKYGWGREKELMKLWNLHVMKYGYIVWLGDFKQGGYQP*****************
Disordered Region (DISOPRED)
********QTYMEAKFQVFFSGLKRLRSPYF**************************************VVSGHNRLYHHTITCLP**************DPKWLQTKTKMMIDEFTDVNEGEKELMKLWNLHVMKYGWGREKELMKLWNLHVMKYGYIVWLGDFKQGGYQPKIPLKKKQTLSVKGIH*
Disordered Region (DISEMBL)
********QTYMEAKFQVFFSGLKRLRSPYFDYQKSFELHGANEQSKGIMTDLKLNDMADDADTDGHRPVVSGHNRLYHHTITCLPVLPKE**********PKWLQTKTKMMIDEFTDVNEGEKELMKLWNLHVMKYGWGREKELMKLWNLHVMKYGYIVWLGDFKQGGYQPKIPLK************
Disordered Region (DISPRO)
**GAISLQQTYMEAKFQVFFSGLKRLRSPYFDYQKS************************DAD*DGHRPVVSGHNRLYHHTITCLPVLPKEMDQDSDDQKDPKWLQTKTKMMIDEFTDVNEGEKELMKLWNLHVMKYGWGREKELMKLWNLHVMKYGYIVWLGDFKQGGYQPKIPLKKKQTLS******
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MSGAISLQQTYMEAKFQVFFSGLKRLRSPYFDYQKSFELHGANEQSKGIMTDLKLNDMADDADTDGHRPVVSGHNRLYHHTITCLPVLPKEMDQDSDDQKDPKWLQTKTKMMIDEFTDVNEGEKELMKLWNLHVMKYGWGREKELMKLWNLHVMKYGYIVWLGDFKQGGYQPKIPLKKKQTLSVKGIHS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	189	2.2.26 [Sep-21-2011]
Q9NJG9	900	Polycomb protein Su(z)12	yes	N/A	0.423	0.088	0.65	5e-27
Q80U70	741	Polycomb protein Suz12 OS	yes	N/A	0.523	0.133	0.535	1e-26
Q15022	739	Polycomb protein SUZ12 OS	yes	N/A	0.523	0.133	0.535	1e-26
Q0VA03	700	Polycomb protein suz12 OS	yes	N/A	0.523	0.141	0.535	3e-26
B0R1D5	682	Polycomb protein suz12-B	yes	N/A	0.460	0.127	0.563	3e-26
Q6DC03	657	Polycomb protein suz12-A	no	N/A	0.534	0.153	0.495	6e-25

>sp|Q9NJG9|SUZ12_DROME Polycomb protein Su(z)12 OS=Drosophila melanogaster GN=Su(z)12 PE=1 SV=1

 Score =  120 bits (301), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 52/80 (65%), Positives = 64/80 (80%)

Query: 60  DDADTDGHRPVVSGHNRLYHHTITCLPVLPKEMDQDSDDQKDPKWLQTKTKMMIDEFTDV 119
           D+ +    R  ++GHNRLYHHT TCLPV PKE+D DS+ + DP WL+ KT  MIDEF+DV
Sbjct: 511 DEDEISNQRSYITGHNRLYHHTETCLPVHPKELDIDSEGESDPLWLRQKTIQMIDEFSDV 570

Query: 120 NEGEKELMKLWNLHVMKYGW 139
           NEGEKELMKLWNLHVM++G+
Sbjct: 571 NEGEKELMKLWNLHVMRHGF 590

Polycomb group (PcG) protein. While PcG proteins are generally required to maintain the transcriptionally repressive state of homeotic genes throughout development, this protein is specifically required during the first 6 hours of embryogenesis to establish the repressed state. Component of the Esc/E(z) complex, which methylates 'Lys-9' (H3K9me) and 'Lys-27' (H3K27me) of histone H3, leading to transcriptional repression of the affected target gene. The Esc/E(z) complex is necessary but not sufficient for the repression of homeotic target genes, suggesting that the recruitment of the distinct PRC1 complex is also required.
Drosophila melanogaster (taxid: 7227)

>sp|Q80U70|SUZ12_MOUSE Polycomb protein Suz12 OS=Mus musculus GN=Suz12 PE=1 SV=2

 Score =  119 bits (298), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 53/99 (53%), Positives = 73/99 (73%)

Query: 59  ADDADTDGHRPVVSGHNRLYHHTITCLPVLPKEMDQDSDDQKDPKWLQTKTKMMIDEFTD 118
           ++D + +  R   SGHNRLY H+ TCLP+ P+EM+ DS+D+KDP+WL+ KT   I+EF+D
Sbjct: 548 SEDGEVEQQRTYSSGHNRLYFHSDTCLPLRPQEMEVDSEDEKDPEWLREKTITQIEEFSD 607

Query: 119 VNEGEKELMKLWNLHVMKYGWGREKELMKLWNLHVMKYG 157
           VNEGEKE+MKLWNLHVMK+G+  + ++     L V  YG
Sbjct: 608 VNEGEKEVMKLWNLHVMKHGFIADNQMNHACMLFVENYG 646

Polycomb group (PcG) protein. Component of the PRC2/EED-EZH2 complex, which methylates 'Lys-9' (H3K9me) and 'Lys-27' (H3K27me) of histone H3, leading to transcriptional repression of the affected target gene. The PRC2/EED-EZH2 complex may also serve as a recruiting platform for DNA methyltransferases, thereby linking two epigenetic repression systems (By similarity). Genes repressed by the PRC2/EED-EZH2 complex include HOXA7, HOXB6 and HOXC8.

Mus musculus (taxid: 10090)

>sp|Q15022|SUZ12_HUMAN Polycomb protein SUZ12 OS=Homo sapiens GN=SUZ12 PE=1 SV=3

 Score =  119 bits (297), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 53/99 (53%), Positives = 73/99 (73%)

Query: 59  ADDADTDGHRPVVSGHNRLYHHTITCLPVLPKEMDQDSDDQKDPKWLQTKTKMMIDEFTD 118
           ++D + +  R   SGHNRLY H+ TCLP+ P+EM+ DS+D+KDP+WL+ KT   I+EF+D
Sbjct: 546 SEDGEVEQQRTYSSGHNRLYFHSDTCLPLRPQEMEVDSEDEKDPEWLREKTITQIEEFSD 605

Query: 119 VNEGEKELMKLWNLHVMKYGWGREKELMKLWNLHVMKYG 157
           VNEGEKE+MKLWNLHVMK+G+  + ++     L V  YG
Sbjct: 606 VNEGEKEVMKLWNLHVMKHGFIADNQMNHACMLFVENYG 644

Polycomb group (PcG) protein. Component of the PRC2/EED-EZH2 complex, which methylates 'Lys-9' (H3K9me) and 'Lys-27' (H3K27me) of histone H3, leading to transcriptional repression of the affected target gene. The PRC2/EED-EZH2 complex may also serve as a recruiting platform for DNA methyltransferases, thereby linking two epigenetic repression systems. Genes repressed by the PRC2/EED-EZH2 complex include HOXC8, HOXA9, MYT1 and CDKN2A.

Homo sapiens (taxid: 9606)

>sp|Q0VA03|SUZ12_XENTR Polycomb protein suz12 OS=Xenopus tropicalis GN=suz12 PE=2 SV=1

 Score =  117 bits (294), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 53/99 (53%), Positives = 73/99 (73%)

Query: 59  ADDADTDGHRPVVSGHNRLYHHTITCLPVLPKEMDQDSDDQKDPKWLQTKTKMMIDEFTD 118
           ++D + +  R   SGHNRLY H+ TCLP+ P+EMD DS+D+KDP+WL+ KT   I+EF+D
Sbjct: 503 SEDGEVEQQRTYSSGHNRLYFHSDTCLPLRPQEMDVDSEDEKDPEWLREKTITQIEEFSD 562

Query: 119 VNEGEKELMKLWNLHVMKYGWGREKELMKLWNLHVMKYG 157
           VNEGEKE+MK+WNLHVMK+G+  + ++     L V  YG
Sbjct: 563 VNEGEKEVMKMWNLHVMKHGFIADNQMNHGCMLFVDNYG 601

Polycomb group (PcG) protein. Component of the prc2/eed-ezh2 complex, which methylates 'Lys-9' (H3K9me) and 'Lys-27' (H3K27me) of histone H3, leading to transcriptional repression of the affected target gene.

Xenopus tropicalis (taxid: 8364)

>sp|B0R1D5|SZ12B_DANRE Polycomb protein suz12-B OS=Danio rerio GN=suz12b PE=2 SV=1

 Score =  117 bits (294), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 49/87 (56%), Positives = 69/87 (79%)

Query: 59  ADDADTDGHRPVVSGHNRLYHHTITCLPVLPKEMDQDSDDQKDPKWLQTKTKMMIDEFTD 118
           ++D + +  R  VSGHNRLY H+ +C+P+ P+EM+ DS+D++DP+WLQ KT   I+EFTD
Sbjct: 506 SEDGEPEQQRTYVSGHNRLYFHSDSCMPLRPQEMEVDSEDERDPEWLQEKTTTQIEEFTD 565

Query: 119 VNEGEKELMKLWNLHVMKYGWGREKEL 145
           VNEGEKE+MKLWNLHVMK G+  + ++
Sbjct: 566 VNEGEKEVMKLWNLHVMKNGFIADNQM 592

Polycomb group (PcG) protein. Component of the prc2/eed-ezh2 complex, which methylates 'Lys-9' and 'Lys-27' of histone H3, leading to transcriptional repression of the affected target gene.

Danio rerio (taxid: 7955)

>sp|Q6DC03|SZ12A_DANRE Polycomb protein suz12-A OS=Danio rerio GN=suz12a PE=2 SV=1

 Score =  113 bits (283), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 50/101 (49%), Positives = 74/101 (73%)

Query: 60  DDADTDGHRPVVSGHNRLYHHTITCLPVLPKEMDQDSDDQKDPKWLQTKTKMMIDEFTDV 119
           +D + +  R  +SGHNRLY H+ +C P+ P+EM+ DS+D++DP WL+ KT M I+EFTDV
Sbjct: 512 EDGEQEQQRTYISGHNRLYFHSDSCTPLRPQEMEVDSEDERDPDWLREKTAMQIEEFTDV 571

Query: 120 NEGEKELMKLWNLHVMKYGWGREKELMKLWNLHVMKYGYIV 160
           NEGEKE+MKLWNL VMK+G+  + ++ +     V ++G I+
Sbjct: 572 NEGEKEIMKLWNLLVMKHGFIADNQMNQACMSFVEQHGTIM 612

Polycomb group (PcG) protein. Component of the prc2/eed-ezh2 complex, which methylates 'Lys-9' and 'Lys-27' of histone H3, leading to transcriptional repression of the affected target gene.

Danio rerio (taxid: 7955)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	189
91079060	673	PREDICTED: similar to Polycomb protein S	0.423	0.118	0.737	3e-31
380017821	690	PREDICTED: LOW QUALITY PROTEIN: polycomb	0.423	0.115	0.725	4e-31
328790448	692	PREDICTED: polycomb protein suz12-B [Api	0.423	0.115	0.725	5e-31
307165851	848	Polycomb protein Suz12 [Camponotus flori	0.423	0.094	0.725	8e-31
350396035	747	PREDICTED: polycomb protein Suz12-like [	0.423	0.107	0.725	9e-31
340730105	745	PREDICTED: polycomb protein Suz12-like [	0.423	0.107	0.725	9e-31
357612572	747	putative Polycomb protein Suz12 [Danaus	0.423	0.107	0.737	2e-30
383862836	857	PREDICTED: polycomb protein suz12-B-like	0.423	0.093	0.712	2e-30
307207789	882	Polycomb protein Suz12 [Harpegnathos sal	0.386	0.082	0.780	3e-30
242008928	695	Polycomb protein Su, putative [Pediculus	0.423	0.115	0.75	4e-30

>gi|91079060|ref|XP_975158.1| PREDICTED: similar to Polycomb protein Suz12 (Suppressor of zeste 12 protein homolog) [Tribolium castaneum] gi|270004197|gb|EFA00645.1| hypothetical protein TcasGA2_TC003521 [Tribolium castaneum]

 Score =  140 bits (352), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 59/80 (73%), Positives = 69/80 (86%)

Query: 60  DDADTDGHRPVVSGHNRLYHHTITCLPVLPKEMDQDSDDQKDPKWLQTKTKMMIDEFTDV 119
           DD + DG RP ++GHNRLYHHT TCLP+ PKEMD DS+ + DP+WL+ KT MMIDEFTDV
Sbjct: 448 DDCEYDGQRPFITGHNRLYHHTTTCLPIYPKEMDVDSEGENDPEWLRNKTMMMIDEFTDV 507

Query: 120 NEGEKELMKLWNLHVMKYGW 139
           NEGEKELMK+WNLHVMKYG+
Sbjct: 508 NEGEKELMKMWNLHVMKYGF 527

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380017821|ref|XP_003692843.1| PREDICTED: LOW QUALITY PROTEIN: polycomb protein suz12-B-like [Apis florea]

 Score =  140 bits (352), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 58/80 (72%), Positives = 71/80 (88%)

Query: 60  DDADTDGHRPVVSGHNRLYHHTITCLPVLPKEMDQDSDDQKDPKWLQTKTKMMIDEFTDV 119
           D+ + +  RP ++GHNRLYHHT+TCLP+ PKEMD DS+ + DPKWLQTKT+MMID+FTDV
Sbjct: 495 DENEYESQRPYITGHNRLYHHTVTCLPIYPKEMDIDSEGENDPKWLQTKTRMMIDDFTDV 554

Query: 120 NEGEKELMKLWNLHVMKYGW 139
           NEGEKELMK+WNLHVMKYG+
Sbjct: 555 NEGEKELMKMWNLHVMKYGY 574

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328790448|ref|XP_392695.3| PREDICTED: polycomb protein suz12-B [Apis mellifera]

 Score =  139 bits (351), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 58/80 (72%), Positives = 71/80 (88%)

Query: 60  DDADTDGHRPVVSGHNRLYHHTITCLPVLPKEMDQDSDDQKDPKWLQTKTKMMIDEFTDV 119
           D+ + +  RP ++GHNRLYHHT+TCLP+ PKEMD DS+ + DPKWLQTKT+MMID+FTDV
Sbjct: 497 DENEYESQRPYITGHNRLYHHTVTCLPIYPKEMDIDSEGENDPKWLQTKTRMMIDDFTDV 556

Query: 120 NEGEKELMKLWNLHVMKYGW 139
           NEGEKELMK+WNLHVMKYG+
Sbjct: 557 NEGEKELMKMWNLHVMKYGY 576

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307165851|gb|EFN60214.1| Polycomb protein Suz12 [Camponotus floridanus]

 Score =  138 bits (348), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 58/80 (72%), Positives = 70/80 (87%)

Query: 60  DDADTDGHRPVVSGHNRLYHHTITCLPVLPKEMDQDSDDQKDPKWLQTKTKMMIDEFTDV 119
           D+ + +  RP ++GHNRLYHHT+TCLP+ PKEMD DS+ + DPKWLQTKT MMID+FTDV
Sbjct: 502 DENEFESQRPYITGHNRLYHHTVTCLPIYPKEMDIDSEGENDPKWLQTKTMMMIDDFTDV 561

Query: 120 NEGEKELMKLWNLHVMKYGW 139
           NEGEKELMK+WNLHVMKYG+
Sbjct: 562 NEGEKELMKMWNLHVMKYGY 581

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350396035|ref|XP_003484416.1| PREDICTED: polycomb protein Suz12-like [Bombus impatiens]

 Score =  138 bits (348), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 58/80 (72%), Positives = 70/80 (87%)

Query: 60  DDADTDGHRPVVSGHNRLYHHTITCLPVLPKEMDQDSDDQKDPKWLQTKTKMMIDEFTDV 119
           D+ + +  RP ++GHNRLYHHT+TCLP+ PKEMD DS+ + DPKWLQTKT MMID+FTDV
Sbjct: 507 DENEYESQRPYITGHNRLYHHTVTCLPIYPKEMDIDSEGENDPKWLQTKTMMMIDDFTDV 566

Query: 120 NEGEKELMKLWNLHVMKYGW 139
           NEGEKELMK+WNLHVMKYG+
Sbjct: 567 NEGEKELMKMWNLHVMKYGY 586

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340730105|ref|XP_003403327.1| PREDICTED: polycomb protein Suz12-like [Bombus terrestris]

 Score =  138 bits (348), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 58/80 (72%), Positives = 70/80 (87%)

Query: 60  DDADTDGHRPVVSGHNRLYHHTITCLPVLPKEMDQDSDDQKDPKWLQTKTKMMIDEFTDV 119
           D+ + +  RP ++GHNRLYHHT+TCLP+ PKEMD DS+ + DPKWLQTKT MMID+FTDV
Sbjct: 505 DENEYESQRPYITGHNRLYHHTVTCLPIYPKEMDIDSEGENDPKWLQTKTMMMIDDFTDV 564

Query: 120 NEGEKELMKLWNLHVMKYGW 139
           NEGEKELMK+WNLHVMKYG+
Sbjct: 565 NEGEKELMKMWNLHVMKYGY 584

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|357612572|gb|EHJ68067.1| putative Polycomb protein Suz12 [Danaus plexippus]

 Score =  137 bits (345), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 59/80 (73%), Positives = 66/80 (82%)

Query: 60  DDADTDGHRPVVSGHNRLYHHTITCLPVLPKEMDQDSDDQKDPKWLQTKTKMMIDEFTDV 119
           DD D D  RP ++GHNRLYHHTITCLPV P E+D DS+ + DP WLQ KT MMIDEFTDV
Sbjct: 499 DDNDVDAQRPYLTGHNRLYHHTITCLPVYPNELDIDSESETDPLWLQQKTMMMIDEFTDV 558

Query: 120 NEGEKELMKLWNLHVMKYGW 139
           NEGEKELMK+WNLHVMKY +
Sbjct: 559 NEGEKELMKMWNLHVMKYNY 578

Source: Danaus plexippus

Species: Danaus plexippus

Genus: Danaus

Family: Nymphalidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383862836|ref|XP_003706889.1| PREDICTED: polycomb protein suz12-B-like [Megachile rotundata]

 Score =  137 bits (345), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 57/80 (71%), Positives = 70/80 (87%)

Query: 60  DDADTDGHRPVVSGHNRLYHHTITCLPVLPKEMDQDSDDQKDPKWLQTKTKMMIDEFTDV 119
           D+ + +  RP ++GHNRLYHHT+TCLP+ PKEMD DS+ + DPKWLQTKT MMID+FTDV
Sbjct: 496 DENEYESQRPYITGHNRLYHHTVTCLPIYPKEMDIDSEGENDPKWLQTKTMMMIDDFTDV 555

Query: 120 NEGEKELMKLWNLHVMKYGW 139
           NEGEKELMK+WNLHVMK+G+
Sbjct: 556 NEGEKELMKMWNLHVMKHGY 575

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307207789|gb|EFN85407.1| Polycomb protein Suz12 [Harpegnathos saltator]

 Score =  136 bits (343), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 57/73 (78%), Positives = 66/73 (90%)

Query: 67  HRPVVSGHNRLYHHTITCLPVLPKEMDQDSDDQKDPKWLQTKTKMMIDEFTDVNEGEKEL 126
            RP ++GHNRLYHHT+TCLP+ PKEMD DS+ + DPKWLQTKT MMID+FTDVNEGEKEL
Sbjct: 505 QRPYITGHNRLYHHTVTCLPIYPKEMDIDSEGENDPKWLQTKTMMMIDDFTDVNEGEKEL 564

Query: 127 MKLWNLHVMKYGW 139
           MK+WNLHVMKYG+
Sbjct: 565 MKMWNLHVMKYGY 577

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242008928|ref|XP_002425246.1| Polycomb protein Su, putative [Pediculus humanus corporis] gi|212508994|gb|EEB12508.1| Polycomb protein Su, putative [Pediculus humanus corporis]

 Score =  136 bits (343), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 60/80 (75%), Positives = 69/80 (86%)

Query: 60  DDADTDGHRPVVSGHNRLYHHTITCLPVLPKEMDQDSDDQKDPKWLQTKTKMMIDEFTDV 119
           ++ D DG RP ++GHNRLYHHT TCLPV PKEMD DS+ + DPKWLQ KT MMID+FTDV
Sbjct: 465 EENDFDGQRPYITGHNRLYHHTTTCLPVYPKEMDIDSEGENDPKWLQQKTIMMIDDFTDV 524

Query: 120 NEGEKELMKLWNLHVMKYGW 139
           NEGEKELMKLWNLHVMK+G+
Sbjct: 525 NEGEKELMKLWNLHVMKHGY 544

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	189
UNIPROTKB|F1PLK9	664	SUZ12 "Uncharacterized protein	0.523	0.149	0.535	1.9e-25
UNIPROTKB|J3QQW9	716	SUZ12 "Polycomb protein SUZ12"	0.523	0.138	0.535	2.3e-25
UNIPROTKB|F1RKV6	737	SUZ12 "Uncharacterized protein	0.523	0.134	0.535	2.5e-25
UNIPROTKB|F1NLE8	739	SUZ12 "Uncharacterized protein	0.523	0.133	0.535	2.5e-25
UNIPROTKB|Q15022	739	SUZ12 "Polycomb protein SUZ12"	0.523	0.133	0.535	2.5e-25
UNIPROTKB|E1B9T7	740	SUZ12 "Uncharacterized protein	0.523	0.133	0.535	2.5e-25
MGI|MGI:1261758	741	Suz12 "suppressor of zeste 12	0.523	0.133	0.535	2.5e-25
FB|FBgn0020887	900	Su(z)12 "Su(z)12" [Drosophila	0.423	0.088	0.65	2.9e-25
UNIPROTKB|Q0VA03	700	suz12 "Polycomb protein suz12"	0.523	0.141	0.535	3.6e-25
ZFIN|ZDB-GENE-030131-3255	682	suz12b "suppressor of zeste 12	0.502	0.139	0.536	1.2e-24

UNIPROTKB|F1PLK9 SUZ12 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 297 (109.6 bits), Expect = 1.9e-25, P = 1.9e-25
 Identities = 53/99 (53%), Positives = 73/99 (73%)

Query:    59 ADDADTDGHRPVVSGHNRLYHHTITCLPVLPKEMDQDSDDQKDPKWLQTKTKMMIDEFTD 118
             ++D + +  R   SGHNRLY H+ TCLP+ P+EM+ DS+D+KDP+WL+ KT   I+EF+D
Sbjct:   471 SEDGEVEQQRTYSSGHNRLYFHSDTCLPLRPQEMEVDSEDEKDPEWLREKTITQIEEFSD 530

Query:   119 VNEGEKELMKLWNLHVMKYGWGREKELMKLWNLHVMKYG 157
             VNEGEKE+MKLWNLHVMK+G+  + ++     L V  YG
Sbjct:   531 VNEGEKEVMKLWNLHVMKHGFIADNQMNHACMLFVENYG 569

GO:0045596 "negative regulation of cell differentiation" evidence=IEA

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0042054 "histone methyltransferase activity" evidence=IEA

GO:0035098 "ESC/E(Z) complex" evidence=IEA

GO:0035064 "methylated histone residue binding" evidence=IEA

GO:0016574 "histone ubiquitination" evidence=IEA

GO:0008284 "positive regulation of cell proliferation" evidence=IEA

GO:0003682 "chromatin binding" evidence=IEA

GO:0001739 "sex chromatin" evidence=IEA

GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|J3QQW9 SUZ12 "Polycomb protein SUZ12" [Homo sapiens (taxid:9606)]

 Score = 297 (109.6 bits), Expect = 2.3e-25, P = 2.3e-25
 Identities = 53/99 (53%), Positives = 73/99 (73%)

Query:    59 ADDADTDGHRPVVSGHNRLYHHTITCLPVLPKEMDQDSDDQKDPKWLQTKTKMMIDEFTD 118
             ++D + +  R   SGHNRLY H+ TCLP+ P+EM+ DS+D+KDP+WL+ KT   I+EF+D
Sbjct:   523 SEDGEVEQQRTYSSGHNRLYFHSDTCLPLRPQEMEVDSEDEKDPEWLREKTITQIEEFSD 582

Query:   119 VNEGEKELMKLWNLHVMKYGWGREKELMKLWNLHVMKYG 157
             VNEGEKE+MKLWNLHVMK+G+  + ++     L V  YG
Sbjct:   583 VNEGEKEVMKLWNLHVMKHGFIADNQMNHACMLFVENYG 621

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|F1RKV6 SUZ12 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 297 (109.6 bits), Expect = 2.5e-25, P = 2.5e-25
 Identities = 53/99 (53%), Positives = 73/99 (73%)

Query:    59 ADDADTDGHRPVVSGHNRLYHHTITCLPVLPKEMDQDSDDQKDPKWLQTKTKMMIDEFTD 118
             ++D + +  R   SGHNRLY H+ TCLP+ P+EM+ DS+D+KDP+WL+ KT   I+EF+D
Sbjct:   544 SEDGEVEQQRTYSSGHNRLYFHSDTCLPLRPQEMEVDSEDEKDPEWLREKTITQIEEFSD 603

Query:   119 VNEGEKELMKLWNLHVMKYGWGREKELMKLWNLHVMKYG 157
             VNEGEKE+MKLWNLHVMK+G+  + ++     L V  YG
Sbjct:   604 VNEGEKEVMKLWNLHVMKHGFIADNQMNHACMLFVENYG 642

GO:0045596 "negative regulation of cell differentiation" evidence=IEA

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0042054 "histone methyltransferase activity" evidence=IEA

GO:0035098 "ESC/E(Z) complex" evidence=IEA

GO:0035064 "methylated histone residue binding" evidence=IEA

GO:0016574 "histone ubiquitination" evidence=IEA

GO:0008284 "positive regulation of cell proliferation" evidence=IEA

GO:0003682 "chromatin binding" evidence=IEA

GO:0001739 "sex chromatin" evidence=IEA

GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|F1NLE8 SUZ12 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 297 (109.6 bits), Expect = 2.5e-25, P = 2.5e-25
 Identities = 53/99 (53%), Positives = 73/99 (73%)

Query:    59 ADDADTDGHRPVVSGHNRLYHHTITCLPVLPKEMDQDSDDQKDPKWLQTKTKMMIDEFTD 118
             ++D + +  R   SGHNRLY H+ TCLP+ P+EM+ DS+D+KDP+WL+ KT   I+EF+D
Sbjct:   546 SEDGEVEQQRTYSSGHNRLYFHSDTCLPLRPQEMEVDSEDEKDPEWLREKTITQIEEFSD 605

Query:   119 VNEGEKELMKLWNLHVMKYGWGREKELMKLWNLHVMKYG 157
             VNEGEKE+MKLWNLHVMK+G+  + ++     L V  YG
Sbjct:   606 VNEGEKEVMKLWNLHVMKHGFIADNQMNHACMLFVENYG 644

GO:0008270 "zinc ion binding" evidence=IEA

GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=IEA

GO:0001739 "sex chromatin" evidence=IEA

GO:0003682 "chromatin binding" evidence=IEA

GO:0008284 "positive regulation of cell proliferation" evidence=IEA

GO:0016574 "histone ubiquitination" evidence=IEA

GO:0035064 "methylated histone residue binding" evidence=IEA

GO:0035098 "ESC/E(Z) complex" evidence=IEA

GO:0042054 "histone methyltransferase activity" evidence=IEA

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0045596 "negative regulation of cell differentiation" evidence=IEA

UNIPROTKB|Q15022 SUZ12 "Polycomb protein SUZ12" [Homo sapiens (taxid:9606)]

 Score = 297 (109.6 bits), Expect = 2.5e-25, P = 2.5e-25
 Identities = 53/99 (53%), Positives = 73/99 (73%)

Query:    59 ADDADTDGHRPVVSGHNRLYHHTITCLPVLPKEMDQDSDDQKDPKWLQTKTKMMIDEFTD 118
             ++D + +  R   SGHNRLY H+ TCLP+ P+EM+ DS+D+KDP+WL+ KT   I+EF+D
Sbjct:   546 SEDGEVEQQRTYSSGHNRLYFHSDTCLPLRPQEMEVDSEDEKDPEWLREKTITQIEEFSD 605

Query:   119 VNEGEKELMKLWNLHVMKYGWGREKELMKLWNLHVMKYG 157
             VNEGEKE+MKLWNLHVMK+G+  + ++     L V  YG
Sbjct:   606 VNEGEKEVMKLWNLHVMKHGFIADNQMNHACMLFVENYG 644

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=IEA

GO:0001739 "sex chromatin" evidence=IEA

GO:0003682 "chromatin binding" evidence=IEA

GO:0008284 "positive regulation of cell proliferation" evidence=IEA

GO:0016574 "histone ubiquitination" evidence=IEA

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0045596 "negative regulation of cell differentiation" evidence=IMP

GO:0035064 "methylated histone residue binding" evidence=IDA

GO:0035098 "ESC/E(Z) complex" evidence=IMP;IDA

GO:0005515 "protein binding" evidence=IPI

GO:0042054 "histone methyltransferase activity" evidence=IMP

UNIPROTKB|E1B9T7 SUZ12 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 297 (109.6 bits), Expect = 2.5e-25, P = 2.5e-25
 Identities = 53/99 (53%), Positives = 73/99 (73%)

Query:    59 ADDADTDGHRPVVSGHNRLYHHTITCLPVLPKEMDQDSDDQKDPKWLQTKTKMMIDEFTD 118
             ++D + +  R   SGHNRLY H+ TCLP+ P+EM+ DS+D+KDP+WL+ KT   I+EF+D
Sbjct:   547 SEDGEVEQQRTYSSGHNRLYFHSDTCLPLRPQEMEVDSEDEKDPEWLREKTITQIEEFSD 606

Query:   119 VNEGEKELMKLWNLHVMKYGWGREKELMKLWNLHVMKYG 157
             VNEGEKE+MKLWNLHVMK+G+  + ++     L V  YG
Sbjct:   607 VNEGEKEVMKLWNLHVMKHGFIADNQMNHACMLFVENYG 645

GO:0045596 "negative regulation of cell differentiation" evidence=IEA

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0042054 "histone methyltransferase activity" evidence=IEA

GO:0035098 "ESC/E(Z) complex" evidence=IEA

GO:0035064 "methylated histone residue binding" evidence=IEA

GO:0016574 "histone ubiquitination" evidence=IEA

GO:0008284 "positive regulation of cell proliferation" evidence=IEA

GO:0003682 "chromatin binding" evidence=IEA

GO:0001739 "sex chromatin" evidence=IEA

GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

MGI|MGI:1261758 Suz12 "suppressor of zeste 12 homolog (Drosophila)" [Mus musculus (taxid:10090)]

 Score = 297 (109.6 bits), Expect = 2.5e-25, P = 2.5e-25
 Identities = 53/99 (53%), Positives = 73/99 (73%)

Query:    59 ADDADTDGHRPVVSGHNRLYHHTITCLPVLPKEMDQDSDDQKDPKWLQTKTKMMIDEFTD 118
             ++D + +  R   SGHNRLY H+ TCLP+ P+EM+ DS+D+KDP+WL+ KT   I+EF+D
Sbjct:   548 SEDGEVEQQRTYSSGHNRLYFHSDTCLPLRPQEMEVDSEDEKDPEWLREKTITQIEEFSD 607

Query:   119 VNEGEKELMKLWNLHVMKYGWGREKELMKLWNLHVMKYG 157
             VNEGEKE+MKLWNLHVMK+G+  + ++     L V  YG
Sbjct:   608 VNEGEKEVMKLWNLHVMKHGFIADNQMNHACMLFVENYG 646

GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=IMP

GO:0001739 "sex chromatin" evidence=IDA

GO:0003682 "chromatin binding" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=IDA

GO:0005694 "chromosome" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0008284 "positive regulation of cell proliferation" evidence=IMP

GO:0016568 "chromatin modification" evidence=IEA

GO:0016571 "histone methylation" evidence=IMP

GO:0016574 "histone ubiquitination" evidence=IMP

GO:0035064 "methylated histone residue binding" evidence=ISO

GO:0035098 "ESC/E(Z) complex" evidence=ISO;IDA

GO:0042054 "histone methyltransferase activity" evidence=ISO

GO:0043565 "sequence-specific DNA binding" evidence=IDA

GO:0045596 "negative regulation of cell differentiation" evidence=ISO

GO:0046872 "metal ion binding" evidence=IEA

FB|FBgn0020887 Su(z)12 "Su(z)12" [Drosophila melanogaster (taxid:7227)]

 Score = 298 (110.0 bits), Expect = 2.9e-25, P = 2.9e-25
 Identities = 52/80 (65%), Positives = 64/80 (80%)

Query:    60 DDADTDGHRPVVSGHNRLYHHTITCLPVLPKEMDQDSDDQKDPKWLQTKTKMMIDEFTDV 119
             D+ +    R  ++GHNRLYHHT TCLPV PKE+D DS+ + DP WL+ KT  MIDEF+DV
Sbjct:   511 DEDEISNQRSYITGHNRLYHHTETCLPVHPKELDIDSEGESDPLWLRQKTIQMIDEFSDV 570

Query:   120 NEGEKELMKLWNLHVMKYGW 139
             NEGEKELMKLWNLHVM++G+
Sbjct:   571 NEGEKELMKLWNLHVMRHGF 590

GO:0035098 "ESC/E(Z) complex" evidence=IDA

GO:0005634 "nucleus" evidence=NAS;IDA

GO:0016571 "histone methylation" evidence=IDA

GO:0046976 "histone methyltransferase activity (H3-K27 specific)" evidence=IC

GO:0005515 "protein binding" evidence=IPI

GO:0005704 "polytene chromosome band" evidence=NAS

GO:0008283 "cell proliferation" evidence=NAS

GO:0008270 "zinc ion binding" evidence=IEA

GO:0031491 "nucleosome binding" evidence=IDA

GO:0035097 "histone methyltransferase complex" evidence=IDA

GO:0042054 "histone methyltransferase activity" evidence=IDA

GO:0007517 "muscle organ development" evidence=IMP

GO:0048813 "dendrite morphogenesis" evidence=IMP

GO:0048666 "neuron development" evidence=IMP

GO:0022008 "neurogenesis" evidence=IMP

GO:2001229 "negative regulation of response to gamma radiation" evidence=IMP

UNIPROTKB|Q0VA03 suz12 "Polycomb protein suz12" [Xenopus (Silurana) tropicalis (taxid:8364)]

 Score = 295 (108.9 bits), Expect = 3.6e-25, P = 3.6e-25
 Identities = 53/99 (53%), Positives = 73/99 (73%)

Query:    59 ADDADTDGHRPVVSGHNRLYHHTITCLPVLPKEMDQDSDDQKDPKWLQTKTKMMIDEFTD 118
             ++D + +  R   SGHNRLY H+ TCLP+ P+EMD DS+D+KDP+WL+ KT   I+EF+D
Sbjct:   503 SEDGEVEQQRTYSSGHNRLYFHSDTCLPLRPQEMDVDSEDEKDPEWLREKTITQIEEFSD 562

Query:   119 VNEGEKELMKLWNLHVMKYGWGREKELMKLWNLHVMKYG 157
             VNEGEKE+MK+WNLHVMK+G+  + ++     L V  YG
Sbjct:   563 VNEGEKEVMKMWNLHVMKHGFIADNQMNHGCMLFVDNYG 601

GO:0035098 "ESC/E(Z) complex" evidence=ISS

ZFIN|ZDB-GENE-030131-3255 suz12b "suppressor of zeste 12 homolog (Drosophila) b" [Danio rerio (taxid:7955)]

 Score = 290 (107.1 bits), Expect = 1.2e-24, P = 1.2e-24
 Identities = 51/95 (53%), Positives = 72/95 (75%)

Query:    59 ADDADTDGHRPVVSGHNRLYHHTITCLPVLPKEMDQDSDDQKDPKWLQTKTKMMIDEFTD 118
             ++D + +  R  VSGHNRLY H+ +C+P+ P+EM+ DS+D++DP+WLQ KT   I+EFTD
Sbjct:   506 SEDGEPEQQRTYVSGHNRLYFHSDSCMPLRPQEMEVDSEDERDPEWLQEKTTTQIEEFTD 565

Query:   119 VNEGEKELMKLWNLHVMKYGWGREKELMKLWNLHV 153
             VNEGEKE+MKLWNLHVMK G+  + ++ +   L V
Sbjct:   566 VNEGEKEVMKLWNLHVMKNGFIADNQMSQASMLFV 600

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0035098 "ESC/E(Z) complex" evidence=ISS

GO:0046872 "metal ion binding" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0016568 "chromatin modification" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9NJG9	SUZ12_DROME	No assigned EC number	0.65	0.4232	0.0888	yes	N/A
B0R1D5	SZ12B_DANRE	No assigned EC number	0.5632	0.4603	0.1275	yes	N/A
Q15022	SUZ12_HUMAN	No assigned EC number	0.5353	0.5238	0.1339	yes	N/A
Q80U70	SUZ12_MOUSE	No assigned EC number	0.5353	0.5238	0.1336	yes	N/A
Q0VA03	SUZ12_XENTR	No assigned EC number	0.5353	0.5238	0.1414	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	189
pfam09733	141	pfam09733, VEFS-Box, VEFS-Box of polycomb protein	1e-31

>gnl|CDD|204299 pfam09733, VEFS-Box, VEFS-Box of polycomb protein

 Score =  111 bits (279), Expect = 1e-31
 Identities = 36/81 (44%), Positives = 50/81 (61%), Gaps = 2/81 (2%)

Query: 60  DDADTDGHRPVVSGHNRLYHHTITCLPVLPKEM--DQDSDDQKDPKWLQTKTKMMIDEFT 117
             A+    R  +  H R + H+ TC P+ P+E+  D+DS+D+ D  WL  +T+ M+DEF 
Sbjct: 4   LSAERSDQRSYILLHKRQFFHSHTCQPMHPEEVMSDRDSEDEVDDDWLDLETRQMLDEFV 63

Query: 118 DVNEGEKELMKLWNLHVMKYG 138
           DVNEGEK +MKLWN  V K  
Sbjct: 64  DVNEGEKRIMKLWNSFVRKQR 84

The VEFS-Box (VRN2-EMF2-FIS2-Su(z)12) box is the C-terminal region of these proteins, characterized by an acidic cluster and a tryptophan/methionine-rich sequence, the acidic-W/M domain. Some of these sequences are associated with a zinc-finger domain about 100 residues towards the N-terminus. This protein is one of the polycomb cluster of proteins which control HOX gene transcription as it functions in heterochromatin-mediated repression. Length = 141

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	189
KOG2350|consensus	221		100.0
PF09733	140	VEFS-Box: VEFS-Box of polycomb protein; InterPro:	100.0
KOG2350|consensus	221		98.84
PF09733	140	VEFS-Box: VEFS-Box of polycomb protein; InterPro:	98.57

>KOG2350|consensus

Probab=100.00  E-value=2.6e-41  Score=286.81  Aligned_cols=127  Identities=29%  Similarity=0.407  Sum_probs=110.2

Q ss_pred             hhhcccCCccCcCccccccccccccCcC------cCCCCCCcc-------------------------------------
Q psy6842          35 KSFELHGANEQSKGIMTDLKLNDMADDA------DTDGHRPVV-------------------------------------   71 (189)
Q Consensus        35 ~~~~~~g~~~~~kGa~idvSlnE~~D~~------d~~~qr~y~-------------------------------------   71 (189)
                      +|+--+-++-||+||++++|+|||||++      +++.|++++                                     
T Consensus         9 hs~~~~~~~~hp~~a~~~~~~~~~~d~~~~g~p~~~~~~pg~s~~~~~~~~~~p~t~i~~~~p~~~att~k~~aersd~~   88 (221)
T KOG2350|consen    9 HSRFIFNYVYHPKGARIDVSINECYDGSYAGNPQDIHRQPGFAFSRNGPVKRTPITHILVCRPKRTATTMKEFAERSDGE   88 (221)
T ss_pred             hhheeeeeecccccccccCCCCCcccccccCCcccccCCCCCCcccCCCCCCCcchhhhccchHhhhhcccccccccccc
Confidence            3444555678999999999999999998      233343333                                     


Q ss_pred             ----cCCCcceeecccceecCCCCCCCCCCCCCC-hhhhchhhhhhhhcccCCCchhhHHHHHHhhhHhhhccccchHHH
Q psy6842          72 ----SGHNRLYHHTITCLPVLPKEMDQDSDDQKD-PKWLQTKTKMMIDEFTDVNEGEKELMKLWNLHVMKYGWGREKELM  146 (189)
Q Consensus        72 ----~ghnR~yfHs~tcqPlr~kE~D~DSEdE~D-p~wl~~eT~~mLdEF~DVSe~EKe~MklWNsfV~k~~~iADkqIp  146 (189)
                          .+|+||||||+|||||+++++..|+|+|.| |+|++.++++||++|+||||+||++|||||+||++|+++||+|||
T Consensus        89 v~~l~lhkRqffHS~t~qPl~leqvmsdrdsE~d~dd~a~~e~~~mLe~fvdvne~ekr~mkLWNsfVrkqrviAD~hip  168 (221)
T KOG2350|consen   89 VEQLRLHKRQFFHSDTCQPLRLEQVMSDRDSEKDEDDWARLETSTMLEEFVDVNEGEKRVMKLWNSFVRKQRVIADGHIP  168 (221)
T ss_pred             eeeeccccceeeeccccCCCCHHHHhccccccccchhhhhhHHHHHHHHhccccHHHHHHHHHHHHHHHHhheeccCCCc
Confidence                599999999999999999998555555544 999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhhcceee
Q psy6842         147 KLWNLHVMKYGYIVW  161 (189)
Q Consensus       147 kacnlFvm~hG~ia~  161 (189)
                      |||++|++.||++++
T Consensus       169 wACeaFsrlhgq~m~  183 (221)
T KOG2350|consen  169 WACEAFSRLHGQKMI  183 (221)
T ss_pred             HHHHHHHHHhHHHHH
Confidence            999999999999765

>PF09733 VEFS-Box: VEFS-Box of polycomb protein; InterPro: IPR019135 The VEFS-Box is found in the the C-terminal region of the VRN2, EMF2, FIS2, and Su(z)12 polycomb proteins

Probab=100.00  E-value=1.5e-38  Score=254.68  Aligned_cols=101  Identities=40%  Similarity=0.638  Sum_probs=97.2

Q ss_pred             cCCCCCCcccCCCcceeecccceecCCCCC--CCCCCCCCChhhhchhhhhhhhcccCCCchhhHHHHHHhhhHhhhccc
Q psy6842          63 DTDGHRPVVSGHNRLYHHTITCLPVLPKEM--DQDSDDQKDPKWLQTKTKMMIDEFTDVNEGEKELMKLWNLHVMKYGWG  140 (189)
Q Consensus        63 d~~~qr~y~~ghnR~yfHs~tcqPlr~kE~--D~DSEdE~Dp~wl~~eT~~mLdEF~DVSe~EKe~MklWNsfV~k~~~i  140 (189)
                      +.+.+|+|++||||+||||+||+||+++|+  |+|||||+|++|++.+++++|+||+|||++||++|++||+||++++++
T Consensus         6 ~~~~~r~~~~~~~R~y~Hs~t~~p~~~~e~~sd~DSedE~D~~wl~~~~r~~l~dF~Dv~~~EKefM~lWN~fv~k~r~~   85 (140)
T PF09733_consen    6 ERSDQRPYILLHNRQYFHSRTCQPMRPEEVLSDRDSEDEVDDEWLDQKHRRMLDDFSDVNEEEKEFMKLWNSFVMKQRVI   85 (140)
T ss_pred             hhhcchhHhhccCcceeccccceeccHHHhcCCCCCCCcCCHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHccCc
Confidence            367899999999999999999999999999  999999999999999999999999999999999999999999999999


Q ss_pred             cchHHHHHHHHHHHhhcceeeec
Q psy6842         141 REKELMKLWNLHVMKYGYIVWLG  163 (189)
Q Consensus       141 ADkqIpkacnlFvm~hG~ia~~~  163 (189)
                      ||++||+||++||..||..+...
T Consensus        86 aD~~ip~ac~~Fv~~~~~~L~~~  108 (140)
T PF09733_consen   86 ADGHIPWACEAFVREHGQWLVEK  108 (140)
T ss_pred             chHHHHHHHHHHHHHhHHHHhhC
Confidence            99999999999999999877654

This domain is characterised by an acidic cluster and a tryptophan/methionine-rich sequence, the acidic-W/M domain []. In some proteins the VEFS-Box is associated with a zinc-finger domain located roughly 100 residues towards the N terminus. These proteins are part of the polycomb cluster of proteins which control HOX gene transcription as it functions in heterochromatin-mediated repression [].

>KOG2350|consensus

Probab=98.84  E-value=1.8e-09  Score=92.89  Aligned_cols=83  Identities=24%  Similarity=0.356  Sum_probs=66.3

Q ss_pred             eeecccceecCCC----CCCCCCCCCC------Chhhhchhhhhhhh--cccCCCchhh---HHHHHHhhhHhhh---cc
Q psy6842          78 YHHTITCLPVLPK----EMDQDSDDQK------DPKWLQTKTKMMID--EFTDVNEGEK---ELMKLWNLHVMKY---GW  139 (189)
Q Consensus        78 yfHs~tcqPlr~k----E~D~DSEdE~------Dp~wl~~eT~~mLd--EF~DVSe~EK---e~MklWNsfV~k~---~~  139 (189)
                      .+|+..|+|++..    ++-+-||.++      .+.+||+.||+||+  +...+.+.|+   +|.++=.+.+...   ++
T Consensus        63 ~t~i~~~~p~~~att~k~~aersd~~v~~l~lhkRqffHS~t~qPl~leqvmsdrdsE~d~dd~a~~e~~~mLe~fvdvn  142 (221)
T KOG2350|consen   63 ITHILVCRPKRTATTMKEFAERSDGEVEQLRLHKRQFFHSDTCQPLRLEQVMSDRDSEKDEDDWARLETSTMLEEFVDVN  142 (221)
T ss_pred             chhhhccchHhhhhcccccccccccceeeeccccceeeeccccCCCCHHHHhccccccccchhhhhhHHHHHHHHhcccc
Confidence            8999999999876    4677778776      56899999999998  4444455554   5666666555554   79


Q ss_pred             ccchHHHHHHHHHHHhhccee
Q psy6842         140 GREKELMKLWNLHVMKYGYIV  160 (189)
Q Consensus       140 iADkqIpkacnlFvm~hG~ia  160 (189)
                      .+++++|+|||.|||+|+.||
T Consensus       143 e~ekr~mkLWNsfVrkqrviA  163 (221)
T KOG2350|consen  143 EGEKRVMKLWNSFVRKQRVIA  163 (221)
T ss_pred             HHHHHHHHHHHHHHHHhheec
Confidence            999999999999999999987

>PF09733 VEFS-Box: VEFS-Box of polycomb protein; InterPro: IPR019135 The VEFS-Box is found in the the C-terminal region of the VRN2, EMF2, FIS2, and Su(z)12 polycomb proteins

Probab=98.57  E-value=3.9e-08  Score=79.34  Aligned_cols=60  Identities=28%  Similarity=0.369  Sum_probs=50.4

Q ss_pred             Chhhhchhhhhhhh--cc--cCCCchhh--HHHHHHhhhHhhh---ccccchHHHHHHHHHHHhhccee
Q psy6842         101 DPKWLQTKTKMMID--EF--TDVNEGEK--ELMKLWNLHVMKY---GWGREKELMKLWNLHVMKYGYIV  160 (189)
Q Consensus       101 Dp~wl~~eT~~mLd--EF--~DVSe~EK--e~MklWNsfV~k~---~~iADkqIpkacnlFvm~hG~ia  160 (189)
                      ++.|+|+.||+|+.  |+  +.+|++|.  +|+..+...+...   ++.++|++|++||+|||+++.++
T Consensus        18 ~R~y~Hs~t~~p~~~~e~~sd~DSedE~D~~wl~~~~r~~l~dF~Dv~~~EKefM~lWN~fv~k~r~~a   86 (140)
T PF09733_consen   18 NRQYFHSRTCQPMRPEEVLSDRDSEDEVDDEWLDQKHRRMLDDFSDVNEEEKEFMKLWNSFVMKQRVIA   86 (140)
T ss_pred             CcceeccccceeccHHHhcCCCCCCCcCCHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHccCcc
Confidence            67999999999998  88  77899986  6666666555444   78999999999999999998764

This domain is characterised by an acidic cluster and a tryptophan/methionine-rich sequence, the acidic-W/M domain []. In some proteins the VEFS-Box is associated with a zinc-finger domain located roughly 100 residues towards the N terminus. These proteins are part of the polycomb cluster of proteins which control HOX gene transcription as it functions in heterochromatin-mediated repression [].

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00