Psyllid ID: psy7033

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------
Protein Sequence
MSESGLAQVATGIGDKLITHRCQSHKYQPLPTNFFQFVAHSNIQQLLAAMWYDGLPGFRRKPLLEKLLDLSKIILIFPYYCLLYMISGMSDTGKIIRKPFVKFVVHA
Secondary Structure (PSIPRED)
ccHHHHHHHHHHccccccccccccccccccccccccccccHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccEEEEccc
Secondary Structure Prediction (SSPRO)
cccccccccccccccHHHHHHHHHHHHccccccccEEEccHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHcccEEEEEEcc
Coil and Loop (DISEMBL)
MSESGLAQVATGIGdklithrcqshkyqplptnffQFVAHSNIQQLLAAMWydglpgfrrkpLLEKLLDLSKIILIFPYYCLLYMISgmsdtgkiirkpfvKFVVHA
Flexible Loop (DISEMBL)
MSESGLAQVATGIGDKLITHRCQSHKYQPLPTNFFQFVAHSNIQQLLAAMWYDGLPGFRRKPLLEKLLDLSKIILIFPYYCLLYMISGMSDTGKIIRKPFVKFVVHA
Low Complexity Region (SEG)
MSESGLAQVATGIGDKLITHRCQSHKYQPLPTNFFQFVAHSNIQQLLAAMWYDGLPGFRRKPLLEKLLDLSKIILIFPYYCLLYMISGMSDTGKIIRKPFVKFVVHA
Disordered region (IsUnstruct)
********VATGIGDKLITHRCQSHKYQPLPTNFFQFVAHSNIQQLLAAMWYDGLPGFRRKPLLEKLLDLSKIILIFPYYCLLYMISGMSDTGKIIRKPFVKFVV**
Disordered Region (DISOPRED)
*****LA*VATGIGDKLITHRCQSHKYQPLPTNFFQFVAHSNIQQLLAAMWYDGLPGFRRKPLLEKLLDLSKIILIFPYYCLLYMISGMSDTGKIIRKPFVKFVVHA
Disordered Region (DISEMBL)
*********ATGIGDKLITHRCQSHKYQPLPTNFFQFVAHSNIQQLLAAMWYDGLPGFRRKPLLEKLLDLSKIILIFPYYCLLYMISGMSDTGKIIRKPFVKFVVHA
Disordered Region (DISPRO)
*************GDKLITHRCQSHKYQPLPTNFFQFVAHSNIQQLLAAMWYDGLPGFRRKPLLEKLLDLSKIILIFPYYCLLYMISGMSDTGKIIRKPFVKFVVHA
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MSESGLAQVATGIGDKLITHRCQSHKYQPLPTNFFQFVAHSNIQQLLAAMWYDGLPGFRRKPLLEKLLDLSKIILIFPYYCLLYMISGMSDTGKIIRKPFVKFVVHA
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	107	2.2.26 [Sep-21-2011]
P48994	1124	Transient-receptor-potent	yes	N/A	0.672	0.064	0.555	1e-21
P19334	1275	Transient receptor potent	no	N/A	0.663	0.055	0.563	1e-18
Q9VJJ7	1128	Transient receptor potent	no	N/A	0.672	0.063	0.5	6e-18
Q9UL62	973	Short transient receptor	yes	N/A	0.672	0.073	0.5	1e-14
Q9QX29	975	Short transient receptor	yes	N/A	0.672	0.073	0.5	1e-14
O62852	974	Short transient receptor	yes	N/A	0.672	0.073	0.5	1e-14
Q9UBN4	977	Short transient receptor	no	N/A	0.672	0.073	0.458	2e-12
O35119	977	Short transient receptor	no	N/A	0.672	0.073	0.458	2e-12
Q9QUQ5	974	Short transient receptor	no	N/A	0.672	0.073	0.458	2e-12
P79100	979	Short transient receptor	no	N/A	0.672	0.073	0.444	2e-12

>sp|P48994|TRPL_DROME Transient-receptor-potential-like protein OS=Drosophila melanogaster GN=trpl PE=1 SV=2

 Score =  102 bits (253), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 40/72 (55%), Positives = 63/72 (87%)

Query: 36  QFVAHSNIQQLLAAMWYDGLPGFRRKPLLEKLLDLSKIILIFPYYCLLYMISGMSDTGKI 95
           +FVAHSNIQQLL+++WYDGLPGFRRK +++K++ ++++ ++FP YCL+YM +    TG++
Sbjct: 310 KFVAHSNIQQLLSSIWYDGLPGFRRKSIVDKVICIAQVAVLFPLYCLIYMCAPNCRTGQL 369

Query: 96  IRKPFVKFVVHA 107
           +RKPF+KF++HA
Sbjct: 370 MRKPFMKFLIHA 381

A light-sensitive calcium channel that is required for inositide-mediated Ca(2+) entry in the retina during phospholipase C (PLC)-mediated phototransduction. Required for vision in the dark and in dim light. Binds calmodulin. Trp and trpl act together in the light response, although it is unclear whether as heteromultimers or distinct units. Also forms a functional cation channel with trp-gamma. Activated by fatty acids, metabolic stress, inositols and GTP-binding proteins.
Drosophila melanogaster (taxid: 7227)

>sp|P19334|TRP_DROME Transient receptor potential protein OS=Drosophila melanogaster GN=trp PE=1 SV=3

 Score = 92.0 bits (227), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 40/71 (56%), Positives = 54/71 (76%)

Query: 37  FVAHSNIQQLLAAMWYDGLPGFRRKPLLEKLLDLSKIILIFPYYCLLYMISGMSDTGKII 96
           FVAH N+QQLLAA+WYDGLPGFRRK   ++L+D+ K+   FP Y L Y+++  S+  K +
Sbjct: 304 FVAHPNVQQLLAAIWYDGLPGFRRKQASQQLMDVVKLGCSFPIYSLKYILAPDSEGAKFM 363

Query: 97  RKPFVKFVVHA 107
           RKPFVKF+ H+
Sbjct: 364 RKPFVKFITHS 374

A light-sensitive calcium channel that is required for inositide-mediated Ca(2+) entry in the retina during phospholipase C (PLC)-mediated phototransduction. Ca(2+) influx may then feed back and inhibit PLC, thereby facilitating phosphatidylinositol 4,5 bisphosphate (PIP2) recycling. Trp and trpl act together in the light response, though it is unclear whether as heteromultimers or as distinct units, and are activated by fatty acids and metabolic stress. Also required for olfactory adaptation and may be involved in olfactory system development.

Drosophila melanogaster (taxid: 7227)

>sp|Q9VJJ7|TRPG_DROME Transient receptor potential-gamma protein OS=Drosophila melanogaster GN=trpgamma PE=1 SV=2

 Score = 89.4 bits (220), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 36/72 (50%), Positives = 57/72 (79%)

Query: 36  QFVAHSNIQQLLAAMWYDGLPGFRRKPLLEKLLDLSKIILIFPYYCLLYMISGMSDTGKI 95
           +FVAHSN+QQLLA++WY+GLPGFRRK +  + +D+ +I ++FP + L Y+++  S  G+ 
Sbjct: 289 KFVAHSNVQQLLASIWYEGLPGFRRKNMALQAVDIIRIGIMFPIFSLAYILAPYSSIGQT 348

Query: 96  IRKPFVKFVVHA 107
           +RKPF+KF+ H+
Sbjct: 349 MRKPFIKFICHS 360

A light-sensitive calcium channel that is required for inositide-mediated Ca(2+) entry in the retina during phospholipase C (PLC)-mediated phototransduction (By similarity). Forms a regulated cation channel when heteromultimerized with trpl.

Drosophila melanogaster (taxid: 7227)

>sp|Q9UL62|TRPC5_HUMAN Short transient receptor potential channel 5 OS=Homo sapiens GN=TRPC5 PE=1 SV=1

 Score = 78.6 bits (192), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 36/72 (50%), Positives = 47/72 (65%)

Query: 36  QFVAHSNIQQLLAAMWYDGLPGFRRKPLLEKLLDLSKIILIFPYYCLLYMISGMSDTGKI 95
           +FVA  N QQLLA +WYDG PG+RRK  + KLL    I  +FP   + Y+IS  S+ G  
Sbjct: 300 EFVAQPNCQQLLATLWYDGFPGWRRKHWVVKLLTCMTIGFLFPMLSIAYLISPRSNLGLF 359

Query: 96  IRKPFVKFVVHA 107
           I+KPF+KF+ H 
Sbjct: 360 IKKPFIKFICHT 371

Thought to form a receptor-activated non-selective calcium permeant cation channel. Probably is operated by a phosphatidylinositol second messenger system activated by receptor tyrosine kinases or G-protein coupled receptors. Has also been shown to be calcium-selective (By similarity). May also be activated by intracellular calcium store depletion.

Homo sapiens (taxid: 9606)

>sp|Q9QX29|TRPC5_MOUSE Short transient receptor potential channel 5 OS=Mus musculus GN=Trpc5 PE=1 SV=2

 Score = 78.6 bits (192), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 36/72 (50%), Positives = 47/72 (65%)

Query: 36  QFVAHSNIQQLLAAMWYDGLPGFRRKPLLEKLLDLSKIILIFPYYCLLYMISGMSDTGKI 95
           +FVA  N QQLLA +WYDG PG+RRK  + KLL    I  +FP   + Y+IS  S+ G  
Sbjct: 300 EFVAQPNCQQLLATLWYDGFPGWRRKHWVVKLLTCMTIGFLFPMLSIAYLISPRSNLGLF 359

Query: 96  IRKPFVKFVVHA 107
           I+KPF+KF+ H 
Sbjct: 360 IKKPFIKFICHT 371

Thought to form a receptor-activated non-selective calcium permeant cation channel. Probably is operated by a phosphatidylinositol second messenger system activated by receptor tyrosine kinases or G-protein coupled receptors. Has also been shown to be calcium-selective. May also be activated by intracellular calcium store depletion.

Mus musculus (taxid: 10090)

>sp|O62852|TRPC5_RABIT Short transient receptor potential channel 5 OS=Oryctolagus cuniculus GN=TRPC5 PE=2 SV=1

 Score = 78.6 bits (192), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 36/72 (50%), Positives = 47/72 (65%)

Query: 36  QFVAHSNIQQLLAAMWYDGLPGFRRKPLLEKLLDLSKIILIFPYYCLLYMISGMSDTGKI 95
           +FVA  N QQLLA +WYDG PG+RRK  + KLL    I  +FP   + Y+IS  S+ G  
Sbjct: 300 EFVAQPNCQQLLATLWYDGFPGWRRKHWVVKLLTCMTIGFLFPMLSIAYLISPRSNLGLF 359

Query: 96  IRKPFVKFVVHA 107
           I+KPF+KF+ H 
Sbjct: 360 IKKPFIKFICHT 371

Thought to form a receptor-activated non-selective calcium permeant cation channel. Probably is operated by a phosphatidylinositol second messenger system activated by receptor tyrosine kinases or G-protein coupled receptors. Has also been shown to be calcium-selective. May also be activated by intracellular calcium store depletion.

Oryctolagus cuniculus (taxid: 9986)

>sp|Q9UBN4|TRPC4_HUMAN Short transient receptor potential channel 4 OS=Homo sapiens GN=TRPC4 PE=1 SV=1

 Score = 71.6 bits (174), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 33/72 (45%), Positives = 46/72 (63%)

Query: 36  QFVAHSNIQQLLAAMWYDGLPGFRRKPLLEKLLDLSKIILIFPYYCLLYMISGMSDTGKI 95
           +FVA  N QQLLA+ WYD  PG+RR+    K++    I L+FP + + Y+I+  S  G  
Sbjct: 299 EFVAQPNCQQLLASRWYDEFPGWRRRHWAVKMVTCFIIGLLFPVFSVCYLIAPKSPLGLF 358

Query: 96  IRKPFVKFVVHA 107
           IRKPF+KF+ H 
Sbjct: 359 IRKPFIKFICHT 370

Form a receptor-activated non-selective calcium permeant cation channel. Acts as a cell-cell contact-dependent endothelial calcium entry channel. Probably operated by a phosphatidylinositol second messenger system activated by receptor tyrosine kinases or G-protein coupled receptors. Mediates cation entry, with an enhanced permeability to barium over calcium. May also be activated by intracellular calcium store depletion.

Homo sapiens (taxid: 9606)

>sp|O35119|TRPC4_RAT Short transient receptor potential channel 4 OS=Rattus norvegicus GN=Trpc4 PE=1 SV=2

 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 33/72 (45%), Positives = 46/72 (63%)

Query: 36  QFVAHSNIQQLLAAMWYDGLPGFRRKPLLEKLLDLSKIILIFPYYCLLYMISGMSDTGKI 95
           +FVA  N QQLLA+ WYD  PG+RR+    K++    I L+FP + + Y+I+  S  G  
Sbjct: 299 EFVAQPNCQQLLASRWYDEFPGWRRRHWAVKMVTCFIIGLLFPVFSVCYLIAPKSPLGLF 358

Query: 96  IRKPFVKFVVHA 107
           IRKPF+KF+ H 
Sbjct: 359 IRKPFIKFICHT 370

Thought to form non-selective a receptor-activated calcium permeant cation channel. Probably is operated by a phosphatidylinositol second messenger system activated by receptor tyrosine kinases or G-protein coupled receptors. Acts as a cell-cell contact-dependent endothelial calcium entry channel. Has also been shown to be calcium-selective (By similarity). May also be activated by intracellular calcium store depletion.

Rattus norvegicus (taxid: 10116)

>sp|Q9QUQ5|TRPC4_MOUSE Short transient receptor potential channel 4 OS=Mus musculus GN=Trpc4 PE=1 SV=1

 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 33/72 (45%), Positives = 46/72 (63%)

Query: 36  QFVAHSNIQQLLAAMWYDGLPGFRRKPLLEKLLDLSKIILIFPYYCLLYMISGMSDTGKI 95
           +FVA  N QQLLA+ WYD  PG+RR+    K++    I L+FP + + Y+I+  S  G  
Sbjct: 299 EFVAQPNCQQLLASRWYDEFPGWRRRHWAVKMVTCFIIGLLFPVFSVCYLIAPKSPLGLF 358

Query: 96  IRKPFVKFVVHA 107
           IRKPF+KF+ H 
Sbjct: 359 IRKPFIKFICHT 370

Thought to form a receptor-activated non-selective calcium permeant cation channel. Probably is operated by a phosphatidylinositol second messenger system activated by receptor tyrosine kinases or G-protein coupled receptors. Acts as a cell-cell contact-dependent endothelial calcium entry channel. Has also been shown to be calcium-selective (By similarity). May also be activated by intracellular calcium store depletion. Trpc4 deficient mice lack a store-operated calcium entry in endothelial cells.

Mus musculus (taxid: 10090)

>sp|P79100|TRPC4_BOVIN Short transient receptor potential channel 4 OS=Bos taurus GN=TRPC4 PE=2 SV=2

 Score = 70.9 bits (172), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 32/72 (44%), Positives = 46/72 (63%)

Query: 36  QFVAHSNIQQLLAAMWYDGLPGFRRKPLLEKLLDLSKIILIFPYYCLLYMISGMSDTGKI 95
           +FVA  N QQLLA+ WYD  PG+RR+    K++    + L+FP + + Y+I+  S  G  
Sbjct: 299 EFVAQPNCQQLLASRWYDEFPGWRRRHWAVKMVTCFIVGLLFPVFSVCYLIAPKSPLGLF 358

Query: 96  IRKPFVKFVVHA 107
           IRKPF+KF+ H 
Sbjct: 359 IRKPFIKFICHT 370

Thought to form a receptor-activated non-selective calcium permeant cation channel. Probably is operated by a phosphatidylinositol second messenger system activated by receptor tyrosine kinases or G-protein coupled receptors. Has also been shown to be calcium-selective. May also be activated by intracellular calcium store depletion. Acts as a cell-cell contact-dependent endothelial calcium entry channel.

Bos taurus (taxid: 9913)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	107
91080143	1213	PREDICTED: similar to calmodulin-binding	0.672	0.059	0.583	1e-21
357607161	1019	calmodulin-binding protein trpl [Danaus	0.672	0.070	0.569	1e-21
157110446	509	transient receptor potential channel 4,	0.672	0.141	0.583	5e-21
170038655	1295	calmodulin-binding protein trpl [Culex q	0.672	0.055	0.597	8e-21
158715	1124	calmodulin-binding protein [Drosophila m	0.672	0.064	0.555	4e-20
17136770	1124	trp-like, isoform A [Drosophila melanoga	0.672	0.064	0.555	4e-20
195332909	1124	GM21150 [Drosophila sechellia] gi|194125	0.672	0.064	0.555	4e-20
25009971	845	GH05912p, partial [Drosophila melanogast	0.672	0.085	0.555	5e-20
195153601	1133	GL17156 [Drosophila persimilis] gi|19411	0.672	0.063	0.541	6e-20
194858342	1124	GG24102 [Drosophila erecta] gi|190661024	0.672	0.064	0.555	6e-20

>gi|91080143|ref|XP_968598.1| PREDICTED: similar to calmodulin-binding protein trpl [Tribolium castaneum] gi|270006411|gb|EFA02859.1| TRP gamma [Tribolium castaneum]

 Score =  107 bits (266), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 42/72 (58%), Positives = 62/72 (86%)

Query: 36  QFVAHSNIQQLLAAMWYDGLPGFRRKPLLEKLLDLSKIILIFPYYCLLYMISGMSDTGKI 95
           +FVAH NIQQLLAA+WY+G+PGFRRK   +K++ + K+ ++FP+YC+LYMI+  + TGK+
Sbjct: 297 KFVAHPNIQQLLAAIWYEGVPGFRRKSSTQKIMIIVKVAVLFPFYCMLYMITPGTKTGKL 356

Query: 96  IRKPFVKFVVHA 107
           +RKPF+KF++HA
Sbjct: 357 MRKPFMKFLIHA 368

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|357607161|gb|EHJ65372.1| calmodulin-binding protein trpl [Danaus plexippus]

 Score =  107 bits (266), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 41/72 (56%), Positives = 59/72 (81%)

Query: 36  QFVAHSNIQQLLAAMWYDGLPGFRRKPLLEKLLDLSKIILIFPYYCLLYMISGMSDTGKI 95
           +FVAH NIQQLLA +WYDG+PGFRRK   EK++ + ++ L+FP+YC +YMI+    TG++
Sbjct: 299 KFVAHPNIQQLLATIWYDGVPGFRRKTAFEKIMIIMRVALMFPFYCCMYMIAPNCSTGRL 358

Query: 96  IRKPFVKFVVHA 107
           +RKPF+KF++HA
Sbjct: 359 VRKPFMKFLIHA 370

Source: Danaus plexippus

Species: Danaus plexippus

Genus: Danaus

Family: Nymphalidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157110446|ref|XP_001651105.1| transient receptor potential channel 4, putative [Aedes aegypti] gi|108878709|gb|EAT42934.1| AAEL005586-PA [Aedes aegypti]

 Score =  104 bits (260), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 42/72 (58%), Positives = 61/72 (84%)

Query: 36  QFVAHSNIQQLLAAMWYDGLPGFRRKPLLEKLLDLSKIILIFPYYCLLYMISGMSDTGKI 95
           +FVAH NIQQLLAAMWY+G+PGFRRK  +EK+  ++K+ ++FP+YC++YMI+   +T K 
Sbjct: 311 KFVAHPNIQQLLAAMWYEGVPGFRRKSAMEKIAIITKVAVLFPFYCMMYMIAPSCETSKF 370

Query: 96  IRKPFVKFVVHA 107
           +RKPF+KF++HA
Sbjct: 371 MRKPFMKFLIHA 382

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|170038655|ref|XP_001847164.1| calmodulin-binding protein trpl [Culex quinquefasciatus] gi|167882363|gb|EDS45746.1| calmodulin-binding protein trpl [Culex quinquefasciatus]

 Score =  104 bits (259), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 43/72 (59%), Positives = 60/72 (83%)

Query: 36  QFVAHSNIQQLLAAMWYDGLPGFRRKPLLEKLLDLSKIILIFPYYCLLYMISGMSDTGKI 95
           +FVAH NIQQLLAAMWY+G+PGFRRK  L+K+  ++K+ ++FP YC+LYMI+   +T K 
Sbjct: 312 KFVAHPNIQQLLAAMWYEGVPGFRRKSALDKIAIITKVAVLFPLYCMLYMIAPTCETSKF 371

Query: 96  IRKPFVKFVVHA 107
           +RKPF+KF++HA
Sbjct: 372 MRKPFMKFLIHA 383

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|158715|gb|AAA28979.1| calmodulin-binding protein [Drosophila melanogaster]

 Score =  102 bits (253), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 40/72 (55%), Positives = 63/72 (87%)

Query: 36  QFVAHSNIQQLLAAMWYDGLPGFRRKPLLEKLLDLSKIILIFPYYCLLYMISGMSDTGKI 95
           +FVAHSNIQQLL+++WYDGLPGFRRK +++K++ ++++ ++FP YCL+YM +    TG++
Sbjct: 310 KFVAHSNIQQLLSSIWYDGLPGFRRKSIVDKVICIAQVAVLFPLYCLIYMCAPNCRTGQL 369

Query: 96  IRKPFVKFVVHA 107
           +RKPF+KF++HA
Sbjct: 370 MRKPFMKFLIHA 381

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|17136770|ref|NP_476895.1| trp-like, isoform A [Drosophila melanogaster] gi|24652173|ref|NP_724822.1| trp-like, isoform B [Drosophila melanogaster] gi|281363033|ref|NP_724823.2| trp-like, isoform D [Drosophila melanogaster] gi|25453459|sp|P48994.2|TRPL_DROME RecName: Full=Transient-receptor-potential-like protein gi|7303858|gb|AAF58904.1| trp-like, isoform A [Drosophila melanogaster] gi|21627600|gb|AAM68793.1| trp-like, isoform B [Drosophila melanogaster] gi|255982985|gb|ACU45760.1| HL01531p [Drosophila melanogaster] gi|272432415|gb|AAM68794.2| trp-like, isoform D [Drosophila melanogaster]

 Score =  102 bits (253), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 40/72 (55%), Positives = 63/72 (87%)

Query: 36  QFVAHSNIQQLLAAMWYDGLPGFRRKPLLEKLLDLSKIILIFPYYCLLYMISGMSDTGKI 95
           +FVAHSNIQQLL+++WYDGLPGFRRK +++K++ ++++ ++FP YCL+YM +    TG++
Sbjct: 310 KFVAHSNIQQLLSSIWYDGLPGFRRKSIVDKVICIAQVAVLFPLYCLIYMCAPNCRTGQL 369

Query: 96  IRKPFVKFVVHA 107
           +RKPF+KF++HA
Sbjct: 370 MRKPFMKFLIHA 381

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195332909|ref|XP_002033134.1| GM21150 [Drosophila sechellia] gi|194125104|gb|EDW47147.1| GM21150 [Drosophila sechellia]

 Score =  102 bits (253), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 40/72 (55%), Positives = 63/72 (87%)

Query: 36  QFVAHSNIQQLLAAMWYDGLPGFRRKPLLEKLLDLSKIILIFPYYCLLYMISGMSDTGKI 95
           +FVAHSNIQQLL+++WYDGLPGFRRK +++K++ ++++ ++FP YCL+YM +    TG++
Sbjct: 310 KFVAHSNIQQLLSSIWYDGLPGFRRKSIVDKVICIAQVAVLFPLYCLIYMCAPNCRTGQL 369

Query: 96  IRKPFVKFVVHA 107
           +RKPF+KF++HA
Sbjct: 370 MRKPFMKFLIHA 381

Source: Drosophila sechellia

Species: Drosophila sechellia

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|25009971|gb|AAN71152.1| GH05912p, partial [Drosophila melanogaster]

 Score =  101 bits (252), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 40/72 (55%), Positives = 63/72 (87%)

Query: 36  QFVAHSNIQQLLAAMWYDGLPGFRRKPLLEKLLDLSKIILIFPYYCLLYMISGMSDTGKI 95
           +FVAHSNIQQLL+++WYDGLPGFRRK +++K++ ++++ ++FP YCL+YM +    TG++
Sbjct: 31  KFVAHSNIQQLLSSIWYDGLPGFRRKSIVDKVICIAQVAVLFPLYCLIYMCAPNCRTGQL 90

Query: 96  IRKPFVKFVVHA 107
           +RKPF+KF++HA
Sbjct: 91  MRKPFMKFLIHA 102

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195153601|ref|XP_002017713.1| GL17156 [Drosophila persimilis] gi|194113509|gb|EDW35552.1| GL17156 [Drosophila persimilis]

 Score =  101 bits (252), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 39/72 (54%), Positives = 62/72 (86%)

Query: 36  QFVAHSNIQQLLAAMWYDGLPGFRRKPLLEKLLDLSKIILIFPYYCLLYMISGMSDTGKI 95
           +FVAHSNIQQLL+++WYDGLPGFRRK +++K++ ++++ ++FP YC +YM +    TG++
Sbjct: 317 KFVAHSNIQQLLSSIWYDGLPGFRRKSIVDKIICIAQVAVLFPVYCFIYMFAPNCRTGRL 376

Query: 96  IRKPFVKFVVHA 107
           +RKPF+KF++HA
Sbjct: 377 MRKPFMKFLIHA 388

Source: Drosophila persimilis

Species: Drosophila persimilis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|194858342|ref|XP_001969157.1| GG24102 [Drosophila erecta] gi|190661024|gb|EDV58216.1| GG24102 [Drosophila erecta]

 Score =  101 bits (251), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 40/72 (55%), Positives = 62/72 (86%)

Query: 36  QFVAHSNIQQLLAAMWYDGLPGFRRKPLLEKLLDLSKIILIFPYYCLLYMISGMSDTGKI 95
           +FVAHSNIQQLL+++WYDGLPGFRRK +++K++ + ++ ++FP YCL+YM +    TG++
Sbjct: 310 KFVAHSNIQQLLSSIWYDGLPGFRRKSIVDKVICIGQVAVLFPLYCLIYMCAPNCRTGQL 369

Query: 96  IRKPFVKFVVHA 107
           +RKPF+KF++HA
Sbjct: 370 MRKPFMKFLIHA 381

Source: Drosophila erecta

Species: Drosophila erecta

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	107
FB|FBgn0005614	1124	trpl "trp-like" [Drosophila me	0.831	0.079	0.473	4.4e-20
FB|FBgn0003861	1275	trp "transient receptor potent	0.663	0.055	0.563	8.2e-17
FB|FBgn0032593	1128	trpgamma "trpgamma" [Drosophil	0.672	0.063	0.5	3e-16
UNIPROTKB|F1M176	848	Trpc5 "Protein Trpc5" [Rattus	0.663	0.083	0.507	9.6e-14
UNIPROTKB|Q9UL62	973	TRPC5 "Short transient recepto	0.663	0.072	0.507	1.2e-13
UNIPROTKB|F1MTE6	974	TRPC5 "Short transient recepto	0.663	0.072	0.507	1.2e-13
UNIPROTKB|F1PA53	974	TRPC5 "Uncharacterized protein	0.663	0.072	0.507	1.2e-13
UNIPROTKB|F1RWU0	974	TRPC5 "Uncharacterized protein	0.663	0.072	0.507	1.2e-13
RGD|619787	974	Trpc5 "transient receptor pote	0.663	0.072	0.507	1.2e-13
UNIPROTKB|E9PSM8	974	Trpc5 "Protein Trpc5" [Rattus	0.663	0.072	0.507	1.2e-13

FB|FBgn0005614 trpl "trp-like" [Drosophila melanogaster (taxid:7227)]

 Score = 251 (93.4 bits), Expect = 4.4e-20, P = 4.4e-20
 Identities = 45/95 (47%), Positives = 73/95 (76%)

Query:    14 GDKL-ITHRCQSHKYQPLPTNFFQFVAHSNIQQLLAAMWYDGLPGFRRKPLLEKLLDLSK 72
             GD++ +T   Q+  Y+       +FVAHSNIQQLL+++WYDGLPGFRRK +++K++ +++
Sbjct:   292 GDRMSLTRLVQAISYKQK-----KFVAHSNIQQLLSSIWYDGLPGFRRKSIVDKVICIAQ 346

Query:    73 IILIFPYYCLLYMISGMSDTGKIIRKPFVKFVVHA 107
             + ++FP YCL+YM +    TG+++RKPF+KF++HA
Sbjct:   347 VAVLFPLYCLIYMCAPNCRTGQLMRKPFMKFLIHA 381

GO:0005516 "calmodulin binding" evidence=ISS;NAS;IDA;TAS

GO:0005886 "plasma membrane" evidence=ISS;IDA;TAS

GO:0008086 "light-activated voltage-gated calcium channel activity" evidence=NAS;IMP

GO:0007603 "phototransduction, visible light" evidence=IMP

GO:0035997 "rhabdomere microvillus membrane" evidence=IDA

GO:0046982 "protein heterodimerization activity" evidence=IPI

GO:0016028 "rhabdomere" evidence=IDA;NAS;TAS

GO:0009416 "response to light stimulus" evidence=TAS

GO:0019722 "calcium-mediated signaling" evidence=IMP;TAS

GO:0005887 "integral to plasma membrane" evidence=NAS

GO:0005262 "calcium channel activity" evidence=IGI;ISS;IDA

GO:0006816 "calcium ion transport" evidence=ISS;IDA

GO:0070588 "calcium ion transmembrane transport" evidence=IGI

GO:0071454 "cellular response to anoxia" evidence=IGI

GO:0005515 "protein binding" evidence=IPI

GO:0016027 "inaD signaling complex" evidence=IPI

GO:0005261 "cation channel activity" evidence=TAS

GO:0015279 "store-operated calcium channel activity" evidence=NAS

GO:0016021 "integral to membrane" evidence=IEA

GO:0007589 "body fluid secretion" evidence=IMP

GO:0007605 "sensory perception of sound" evidence=IMP

FB|FBgn0003861 trp "transient receptor potential" [Drosophila melanogaster (taxid:7227)]

 Score = 221 (82.9 bits), Expect = 8.2e-17, P = 8.2e-17
 Identities = 40/71 (56%), Positives = 54/71 (76%)

Query:    37 FVAHSNIQQLLAAMWYDGLPGFRRKPLLEKLLDLSKIILIFPYYCLLYMISGMSDTGKII 96
             FVAH N+QQLLAA+WYDGLPGFRRK   ++L+D+ K+   FP Y L Y+++  S+  K +
Sbjct:   304 FVAHPNVQQLLAAIWYDGLPGFRRKQASQQLMDVVKLGCSFPIYSLKYILAPDSEGAKFM 363

Query:    97 RKPFVKFVVHA 107
             RKPFVKF+ H+
Sbjct:   364 RKPFVKFITHS 374

GO:0016028 "rhabdomere" evidence=NAS;IDA;TAS

GO:0050908 "detection of light stimulus involved in visual perception" evidence=IMP

GO:0005262 "calcium channel activity" evidence=ISS;IMP

GO:0009416 "response to light stimulus" evidence=IMP;TAS

GO:0006816 "calcium ion transport" evidence=ISS;IMP

GO:0005886 "plasma membrane" evidence=IDA

GO:0008086 "light-activated voltage-gated calcium channel activity" evidence=NAS;IMP

GO:0035997 "rhabdomere microvillus membrane" evidence=IDA

GO:0007603 "phototransduction, visible light" evidence=IMP

GO:0042803 "protein homodimerization activity" evidence=IPI

GO:0046982 "protein heterodimerization activity" evidence=IPI

GO:0008377 "light-induced release of internally sequestered calcium ion" evidence=IDA

GO:0015279 "store-operated calcium channel activity" evidence=NAS;TAS

GO:0005516 "calmodulin binding" evidence=TAS

GO:0019722 "calcium-mediated signaling" evidence=TAS

GO:0008087 "light-activated voltage-gated calcium channel complex" evidence=NAS

GO:0005887 "integral to plasma membrane" evidence=NAS

GO:0007602 "phototransduction" evidence=NAS

GO:0070588 "calcium ion transmembrane transport" evidence=IMP

GO:0071454 "cellular response to anoxia" evidence=IGI

GO:0008355 "olfactory learning" evidence=IMP

GO:0008104 "protein localization" evidence=IMP

GO:0016027 "inaD signaling complex" evidence=TAS;IPI

GO:0005218 "intracellular ligand-gated calcium channel activity" evidence=NAS

GO:0016021 "integral to membrane" evidence=IEA

GO:0030845 "phospholipase C-inhibiting G-protein coupled receptor signaling pathway" evidence=IMP

GO:0050962 "detection of light stimulus involved in sensory perception" evidence=IMP

GO:0005515 "protein binding" evidence=IPI

GO:0007605 "sensory perception of sound" evidence=IMP

FB|FBgn0032593 trpgamma "trpgamma" [Drosophila melanogaster (taxid:7227)]

 Score = 215 (80.7 bits), Expect = 3.0e-16, P = 3.0e-16
 Identities = 36/72 (50%), Positives = 57/72 (79%)

Query:    36 QFVAHSNIQQLLAAMWYDGLPGFRRKPLLEKLLDLSKIILIFPYYCLLYMISGMSDTGKI 95
             +FVAHSN+QQLLA++WY+GLPGFRRK +  + +D+ +I ++FP + L Y+++  S  G+ 
Sbjct:   289 KFVAHSNVQQLLASIWYEGLPGFRRKNMALQAVDIIRIGIMFPIFSLAYILAPYSSIGQT 348

Query:    96 IRKPFVKFVVHA 107
             +RKPF+KF+ H+
Sbjct:   349 MRKPFIKFICHS 360

GO:0005262 "calcium channel activity" evidence=ISS

GO:0050908 "detection of light stimulus involved in visual perception" evidence=ISS

GO:0006816 "calcium ion transport" evidence=ISS

GO:0016028 "rhabdomere" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0005261 "cation channel activity" evidence=IDA;NAS

GO:0006812 "cation transport" evidence=NAS

GO:0009416 "response to light stimulus" evidence=TAS

GO:0016021 "integral to membrane" evidence=IEA

GO:0070588 "calcium ion transmembrane transport" evidence=IEA

UNIPROTKB|F1M176 Trpc5 "Protein Trpc5" [Rattus norvegicus (taxid:10116)]

 Score = 190 (71.9 bits), Expect = 9.6e-14, P = 9.6e-14
 Identities = 36/71 (50%), Positives = 47/71 (66%)

Query:    36 QFVAHSNIQQLLAAMWYDGLPGFRRKPLLEKLLDLSKIILIFPYYCLLYMISGMSDTGKI 95
             +FVA  N QQLLA +WYDG PG+RRK  + KLL    I  +FP   + Y+IS  S+ G  
Sbjct:   174 EFVAQPNCQQLLATLWYDGFPGWRRKHWVVKLLTCMTIGFLFPMLSIAYLISPRSNLGLF 233

Query:    96 IRKPFVKFVVH 106
             I+KPF+KF+ H
Sbjct:   234 IKKPFIKFICH 244

GO:0005262 "calcium channel activity" evidence=IEA

GO:0034704 "calcium channel complex" evidence=IEA

GO:0070679 "inositol 1,4,5 trisphosphate binding" evidence=IEA

UNIPROTKB|Q9UL62 TRPC5 "Short transient receptor potential channel 5" [Homo sapiens (taxid:9606)]

 Score = 190 (71.9 bits), Expect = 1.2e-13, P = 1.2e-13
 Identities = 36/71 (50%), Positives = 47/71 (66%)

Query:    36 QFVAHSNIQQLLAAMWYDGLPGFRRKPLLEKLLDLSKIILIFPYYCLLYMISGMSDTGKI 95
             +FVA  N QQLLA +WYDG PG+RRK  + KLL    I  +FP   + Y+IS  S+ G  
Sbjct:   300 EFVAQPNCQQLLATLWYDGFPGWRRKHWVVKLLTCMTIGFLFPMLSIAYLISPRSNLGLF 359

Query:    96 IRKPFVKFVVH 106
             I+KPF+KF+ H
Sbjct:   360 IKKPFIKFICH 370

GO:0070679 "inositol 1,4,5 trisphosphate binding" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

GO:0034704 "calcium channel complex" evidence=IDA

GO:0005262 "calcium channel activity" evidence=IDA

GO:0005887 "integral to plasma membrane" evidence=TAS

GO:0006816 "calcium ion transport" evidence=TAS

GO:0007399 "nervous system development" evidence=TAS

GO:0015279 "store-operated calcium channel activity" evidence=TAS

GO:0007411 "axon guidance" evidence=TAS

UNIPROTKB|F1MTE6 TRPC5 "Short transient receptor potential channel 5" [Bos taurus (taxid:9913)]

 Score = 190 (71.9 bits), Expect = 1.2e-13, P = 1.2e-13
 Identities = 36/71 (50%), Positives = 47/71 (66%)

Query:    36 QFVAHSNIQQLLAAMWYDGLPGFRRKPLLEKLLDLSKIILIFPYYCLLYMISGMSDTGKI 95
             +FVA  N QQLLA +WYDG PG+RRK  + KLL    I  +FP   + Y+IS  S+ G  
Sbjct:   300 EFVAQPNCQQLLATLWYDGFPGWRRKHWVVKLLTCMTIGFLFPMLSIAYLISPRSNLGLF 359

Query:    96 IRKPFVKFVVH 106
             I+KPF+KF+ H
Sbjct:   360 IKKPFIKFICH 370

GO:0070679 "inositol 1,4,5 trisphosphate binding" evidence=IEA

GO:0034704 "calcium channel complex" evidence=IEA

GO:0005262 "calcium channel activity" evidence=IEA

UNIPROTKB|F1PA53 TRPC5 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 190 (71.9 bits), Expect = 1.2e-13, P = 1.2e-13
 Identities = 36/71 (50%), Positives = 47/71 (66%)

Query:    36 QFVAHSNIQQLLAAMWYDGLPGFRRKPLLEKLLDLSKIILIFPYYCLLYMISGMSDTGKI 95
             +FVA  N QQLLA +WYDG PG+RRK  + KLL    I  +FP   + Y+IS  S+ G  
Sbjct:   300 EFVAQPNCQQLLATLWYDGFPGWRRKHWVVKLLTCMTIGFLFPMLSIAYLISPRSNLGLF 359

Query:    96 IRKPFVKFVVH 106
             I+KPF+KF+ H
Sbjct:   360 IKKPFIKFICH 370

GO:0016021 "integral to membrane" evidence=IEA

GO:0005262 "calcium channel activity" evidence=IEA

UNIPROTKB|F1RWU0 TRPC5 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 190 (71.9 bits), Expect = 1.2e-13, P = 1.2e-13
 Identities = 36/71 (50%), Positives = 47/71 (66%)

Query:    36 QFVAHSNIQQLLAAMWYDGLPGFRRKPLLEKLLDLSKIILIFPYYCLLYMISGMSDTGKI 95
             +FVA  N QQLLA +WYDG PG+RRK  + KLL    I  +FP   + Y+IS  S+ G  
Sbjct:   300 EFVAQPNCQQLLATLWYDGFPGWRRKHWVVKLLTCMTIGFLFPMLSIAYLISPRSNLGLF 359

Query:    96 IRKPFVKFVVH 106
             I+KPF+KF+ H
Sbjct:   360 IKKPFIKFICH 370

GO:0070679 "inositol 1,4,5 trisphosphate binding" evidence=IEA

GO:0034704 "calcium channel complex" evidence=IEA

GO:0005262 "calcium channel activity" evidence=IEA

RGD|619787 Trpc5 "transient receptor potential cation channel, subfamily C, member 5" [Rattus norvegicus (taxid:10116)]

 Score = 190 (71.9 bits), Expect = 1.2e-13, P = 1.2e-13
 Identities = 36/71 (50%), Positives = 47/71 (66%)

Query:    36 QFVAHSNIQQLLAAMWYDGLPGFRRKPLLEKLLDLSKIILIFPYYCLLYMISGMSDTGKI 95
             +FVA  N QQLLA +WYDG PG+RRK  + KLL    I  +FP   + Y+IS  S+ G  
Sbjct:   300 EFVAQPNCQQLLATLWYDGFPGWRRKHWVVKLLTCMTIGFLFPMLSIAYLISPRSNLGLF 359

Query:    96 IRKPFVKFVVH 106
             I+KPF+KF+ H
Sbjct:   360 IKKPFIKFICH 370

GO:0005262 "calcium channel activity" evidence=ISO

GO:0034704 "calcium channel complex" evidence=ISO

GO:0070679 "inositol 1,4,5 trisphosphate binding" evidence=ISO

UNIPROTKB|E9PSM8 Trpc5 "Protein Trpc5" [Rattus norvegicus (taxid:10116)]

 Score = 190 (71.9 bits), Expect = 1.2e-13, P = 1.2e-13
 Identities = 36/71 (50%), Positives = 47/71 (66%)

Query:    36 QFVAHSNIQQLLAAMWYDGLPGFRRKPLLEKLLDLSKIILIFPYYCLLYMISGMSDTGKI 95
             +FVA  N QQLLA +WYDG PG+RRK  + KLL    I  +FP   + Y+IS  S+ G  
Sbjct:   300 EFVAQPNCQQLLATLWYDGFPGWRRKHWVVKLLTCMTIGFLFPMLSIAYLISPRSNLGLF 359

Query:    96 IRKPFVKFVVH 106
             I+KPF+KF+ H
Sbjct:   360 IKKPFIKFICH 370

GO:0005262 "calcium channel activity" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
P48994	TRPL_DROME	No assigned EC number	0.5555	0.6728	0.0640	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	107
TIGR00870	743	TIGR00870, trp, transient-receptor-potential calci	3e-17

>gnl|CDD|233161 TIGR00870, trp, transient-receptor-potential calcium channel protein

 Score = 75.1 bits (185), Expect = 3e-17
 Identities = 29/71 (40%), Positives = 44/71 (61%)

Query: 37  FVAHSNIQQLLAAMWYDGLPGFRRKPLLEKLLDLSKIILIFPYYCLLYMISGMSDTGKII 96
           FVA  N QQLL+  W + L G+RRK  + +L+ +  I L FP    +Y+I+ +S  G+  
Sbjct: 286 FVAWPNGQQLLSLYWLEELDGWRRKQSVLELIVVFVIGLKFPELSDMYLIAPLSRLGQFK 345

Query: 97  RKPFVKFVVHA 107
            KPF+KF+ H+
Sbjct: 346 WKPFIKFIFHS 356

The Transient Receptor Potential Ca2+ Channel (TRP-CC) Family (TC. 1.A.4)The TRP-CC family has also been called the store-operated calcium channel (SOC) family. The prototypical members include the Drosophila retinal proteinsTRP and TRPL (Montell and Rubin, 1989; Hardie and Minke, 1993). SOC members of the family mediate the entry of extracellular Ca2+ into cells in responseto depletion of intracellular Ca2+ stores (Clapham, 1996) and agonist stimulated production of inositol-1,4,5 trisphosphate (IP3). One member of the TRP-CCfamily, mammalian Htrp3, has been shown to form a tight complex with the IP3 receptor (TC #1.A.3.2.1). This interaction is apparently required for IP3 tostimulate Ca2+ release via Htrp3. The vanilloid receptor subtype 1 (VR1), which is the receptor for capsaicin (the ?hot? ingredient in chili peppers) and servesas a heat-activated ion channel in the pain pathway (Caterina et al., 1997), is also a member of this family. The stretch-inhibitable non-selective cation channel(SIC) is identical to the vanilloid receptor throughout all of its first 700 residues, but it exhibits a different sequence in its last 100 residues. VR1 and SICtransport monovalent cations as well as Ca2+. VR1 is about 10x more permeable to Ca2+ than to monovalent ions. Ca2+ overload probably causes cell deathafter chronic exposure to capsaicin. (McCleskey and Gold, 1999) [Transport and binding proteins, Cations and iron carrying compounds]. Length = 743

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	107
KOG3609|consensus	822		99.95
TIGR00870	743	trp transient-receptor-potential calcium channel p	99.37
KOG3614|consensus	1381		99.18

>KOG3609|consensus

Probab=99.95  E-value=7.5e-29  Score=211.59  Aligned_cols=83  Identities=41%  Similarity=0.680  Sum_probs=80.5

Q ss_pred             cCCCCcccccccccc--ceeehhHHHHHHHHHhcCCCCCcccchHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhccc
Q psy7033          22 CQSHKYQPLPTNFFQ--FVAHSNIQQLLAAMWYDGLPGFRRKPLLEKLLDLSKIILIFPYYCLLYMISGMSDTGKIIRKP   99 (107)
Q Consensus        22 ~~~~~~L~lAi~~~q--FVAHp~~Q~~L~~~Wy~~l~~~~~~~~~~k~l~~~~~~~~~Pll~l~y~i~P~s~~g~~~r~P   99 (107)
                      ..+++|||+||+|+|  |||||||||+|+++||+   |||+++...|++.+..++++||+++++|+++|+|+.|+++|+|
T Consensus       269 ~~sl~RLklAIkyeqK~FVahpNcQq~L~siWy~---g~R~~~~~~K~~~~~~~~~~~P~~~l~yllap~S~~G~~~r~P  345 (822)
T KOG3609|consen  269 RISLPRLKLAIKYEQKEFVAHPNCQQLLKSVWYS---GWRRKGIKPKFDAWRFLRLCFPMPSLVYLLAPMSRKGTTMRKP  345 (822)
T ss_pred             ccccHHHHHHHHHhhhheecCccHHHHHHHHHhh---hhhhcchHHHHHHHHHHHHHhHHHHHHHHhCCCCcccchhhch
Confidence            367899999999999  99999999999999999   8999999999999999999999999999999999999999999


Q ss_pred             eeeccccC
Q psy7033         100 FVKFVVHA  107 (107)
Q Consensus       100 fvKF~~h~  107 (107)
                      |+||++|+
T Consensus       346 fmKFi~H~  353 (822)
T KOG3609|consen  346 FMKFIAHI  353 (822)
T ss_pred             HHHHHHHH
Confidence            99999995

>TIGR00870 trp transient-receptor-potential calcium channel protein

Probab=99.37  E-value=5.6e-14  Score=119.39  Aligned_cols=83  Identities=37%  Similarity=0.572  Sum_probs=77.5

Q ss_pred             CCcccccccccc--ceeehhHHHHHHHHHhcCCCCCcccchHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhccceee
Q psy7033          25 HKYQPLPTNFFQ--FVAHSNIQQLLAAMWYDGLPGFRRKPLLEKLLDLSKIILIFPYYCLLYMISGMSDTGKIIRKPFVK  102 (107)
Q Consensus        25 ~~~L~lAi~~~q--FVAHp~~Q~~L~~~Wy~~l~~~~~~~~~~k~l~~~~~~~~~Pll~l~y~i~P~s~~g~~~r~PfvK  102 (107)
                      +.++.++++++|  ||+||+||+.++..||++.++|++++..++++......+.+|..+.+|.++|.+++|++.++||+|
T Consensus       272 l~~lLL~~~~~~kk~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~p~~~~~~~~~P~~~l~~~kw~pf~k  351 (743)
T TIGR00870       272 LFRLKLAIKYKQKKFVAWPNGQQLLSLYWLEELDGWRRKQSVLELIVVFVIGLKFPELSDMYLIAPLSRLGQFKWKPFIK  351 (743)
T ss_pred             HHHHHHHHHHhcceeeccCcchHhHhhhccccCCcccccccHHHHHHHHHHhhcChHHHHHHHHhhhHHHHHHHHHHHHH
Confidence            346778999999  999999999999999999999999988999999988888999999999999999999999999999


Q ss_pred             ccccC
Q psy7033         103 FVVHA  107 (107)
Q Consensus       103 F~~h~  107 (107)
                      |+.|+
T Consensus       352 f~~~~  356 (743)
T TIGR00870       352 FIFHS  356 (743)
T ss_pred             HHHHH
Confidence            99873

after chronic exposure to capsaicin. (McCleskey and Gold, 1999).

>KOG3614|consensus

Probab=99.18  E-value=7.3e-12  Score=112.01  Aligned_cols=71  Identities=23%  Similarity=0.258  Sum_probs=59.3

Q ss_pred             hcchhhhhhhhcCCC---Ccccccccccc--ceeehhHHHHHHHHHhcCCCCCcccchHHHHHHHHHHHHHHHHHHHHHH
Q psy7033          11 TGIGDKLITHRCQSH---KYQPLPTNFFQ--FVAHSNIQQLLAAMWYDGLPGFRRKPLLEKLLDLSKIILIFPYYCLLYM   85 (107)
Q Consensus        11 ~~~g~~ll~~~~~~~---~~L~lAi~~~q--FVAHp~~Q~~L~~~Wy~~l~~~~~~~~~~k~l~~~~~~~~~Pll~l~y~   85 (107)
                      ...+.+|+++++..|   +||++|++++.  |+|||.||.+|+++|||++..  +++.++|++.+++   ++|++.+.-+
T Consensus       640 e~~A~~LLt~el~~W~~~tCL~LAv~a~~r~FiAH~c~Q~lLt~~W~G~L~~--r~~~~~kvila~i---cpP~Il~l~~  714 (1381)
T KOG3614|consen  640 EARALQLLTYELENWGNSTCLQLAVEANAREFIAHPCCQMLLTDKWYGNLQA--RNNPIWKVILALI---CPPLILTLLV  714 (1381)
T ss_pred             HHHHHHHHHhHHhhcccccHHHHHHhcCCCceeccHhHHHHHHHHHhccccc--cCCCcHHHHHHHH---hhHHHHHhhc
Confidence            345678889999987   89999999998  999999999999999999853  7778899888765   8888777643


Q ss_pred             H
Q psy7033          86 I   86 (107)
Q Consensus        86 i   86 (107)
                      =
T Consensus       715 k  715 (1381)
T KOG3614|consen  715 K  715 (1381)
T ss_pred             c
Confidence            3

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00