Psyllid ID: psy7103

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------
MNIVRKLRSGSTGGVAPSSHEDSSQHSALGVMHLKKLFAEFSHSVNHLSEKEKDDKLYNMLPLFCKVFGNSNSADMTDKFRDVHQFCDHVSRLMVTKVCQRASNQSTEIASCAIAKFLEIENSEESSSGWMLLSTLNLLAAGDVSLVEVMTKASLPSTLVKCLYLFFDLPQMNEEEANITDVNSDFTPRERRILLQKIFVQLLVRLCSHSAPAEELSNKDDLTLLFSAITSLCPPYNVIWRKSAAEILMSLSSQALTPKVVQYVHDKGCIALCIENMTRRKGQDLTPLEIVEMFVSVFCFLKDSSEVSQILLKDFKEAHGYTFLKNFLINLENDRSSEAQEAIRNLILMIATLSMCGYVELRPNAASMGCIFQILGFCMPQPSGRGKFKLRSLDGRKKNDSELEGLLAVNRLCHKLLSKLLGLDDYDAMLHEANHNVLAPYGRITLHIFWELNYDFLPNYCYNGATN
cHHHHHHHcccccccccccccccccccccHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHcccccccHHHHcccHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHcccccccccccHHHHHHHHHHHHcccHHHHHHHHHccccHHHHHHHHHHcccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHcccccccccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHcccHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccEEEcccccccHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHccccccccHHHHHHHHHHHHHHccccccccccccc
ccHHHHHcccccccccccccccccccccHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHcccHHHHHHHHHcccHHHHHHHHHHHHccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHccccHHHHHHcccHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHcccHHHHHHHHHHHHccccHHcHHHHHHHHHHHHHHHHccccEcccccccccccccccccEcccccccccEEEEEHHHHcccHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHcccccccccHEEEEEEHHHHHccccccEEccccc
mnivrklrsgstggvapsshedssqhsaLGVMHLKKLFAEFSHsvnhlsekekddklyNMLPLFCKvfgnsnsadmtdkfrdVHQFCDHVSRLMVTKVCQRASNQSTEIASCAIAKFLeienseesssgwMLLSTLNLLAAGDVSLVEVMTKASLPSTLVKCLYLFfdlpqmneeeanitdvnsdftpRERRILLQKIFVQLLVRLCshsapaeelsnkddLTLLFSAItslcppynviWRKSAAEILMSLssqaltpkVVQYVHDKGCIALCIENmtrrkgqdltplEIVEMFVSVFCFLKDSSEVSQILLKDFKEAHGYTFLKNFLINLENDRSSEAQEAIRNLILMIATLSMcgyvelrpnaasmGCIFQILgfcmpqpsgrgkfklrsldgrkkndsELEGLLAVNRLCHKLLSKLLGLDDYDAMLHEAnhnvlapygriTLHIFWELnydflpnycyngatn
mnivrklrsgstggvapsshedssqHSALGVMHLKKLFAEFSHSVNHLSEKEKDDKLYNMLPLFCKVFGNSNSADMTDKFRDVHQFCDHVSRLMVTKVCQRASNQSTEIASCAIAKFLEIENSEESSSGWMLLSTLNLLAAGDVSLVEVMTKASLPSTLVKCLYLFFDLPQMNEEEANITDVNSDFTPRERRILLQKIFVQLLVRLCSHSapaeelsnkdDLTLLFSAITSLCPPYNVIWRKSAAEILMSLSSQALTPKVVQYVHDKGCIALCIENMTRRKGQDLTPLEIVEMFVSVFCFLKDSSEVSQILLKDFKEAHGYTFLKNFLINLENDRSSEAQEAIRNLILMIATLSMCGYVELRPNAASMGCIFQILGFCMPQPSGRGKFKLRSLDGRKKNDSELEGLLAVNRLCHKLLSKLLGLDDYDAMLHEANHNVLAPYGRITLHIFWELNYDFLPNYCYNGATN
MNIVRKLRSGSTGGVAPSSHEDSSQHSALGVMHLKKLFAEFSHSVNHLSEKEKDDKLYNMLPLFCKVFGNSNSADMTDKFRDVHQFCDHVSRLMVTKVCQRASNQSTEIASCAIAKFLEIENSEESSSGWMLLSTLNLLAAGDVSLVEVMTKASLPSTLVKCLYLFFDLPQMNEEEANITDVNSDFTPRERRILLQKIFVQLLVRLCSHSAPAEELSNKDDLTLLFSAITSLCPPYNVIWRKSAAEILMSLSSQALTPKVVQYVHDKGCIALCIENMTRRKGQDLTPLEIVEMFVSVFCFLKDSSEVSQILLKDFKEAHGYTFLKNFLINLENDRSSEAQEAIRNLILMIATLSMCGYVELRPNAASMGCIFQILGFCMPQPSGRGKFKLRSLDGRKKNDSELEGLLAVNRlchkllskllglDDYDAMLHEANHNVLAPYGRITLHIFWELNYDFLPNYCYNGATN
*****************************GVMHLKKLFAEFSHSVNH*******DKLYNMLPLFCKVFGNSNSADMTDKFRDVHQFCDHVSRLMVTKVCQRASNQSTEIASCAIAKFLEIEN****SSGWMLLSTLNLLAAGDVSLVEVMTKASLPSTLVKCLYLFFDLPQMNEEEANITDVNSDFTPRERRILLQKIFVQLLVRLCSHSAPAEELSNKDDLTLLFSAITSLCPPYNVIWRKSAAEILMSLSSQALTPKVVQYVHDKGCIALCIENMTRRKGQDLTPLEIVEMFVSVFCFLKDSSEVSQILLKDFKEAHGYTFLKNFLINLEND****AQEAIRNLILMIATLSMCGYVELRPNAASMGCIFQILGFCMP**********************LEGLLAVNRLCHKLLSKLLGLDDYDAMLHEANHNVLAPYGRITLHIFWELNYDFLPNYCYN****
*******************************MHLKKLFA*******************NMLPLFCKVFGNSNSADMTDKFRDVHQFCDHVSRLMVTK****************IAKFLEIENSEESSSGWMLLSTLNLLAAGDVSLVEVMTKASLPSTLVKCLYLFFDLPQ*********************ILLQKIFVQLLVRLCSHSAPAEELSNKDDLTLLFSAITSLCPPYNVIWRKSAAEILMSLSSQALTPKVVQYVHDKGCIALCIENMTRRKGQDLTPLEIVEMFVSVFCFLKDSSEVSQILLKDFKEAHGYTFLKNFLINL*************NLILMIATLSMCGYVELRPNAASMGCIFQILGFCMPQP*******LRSLDGRKKNDSELEGLLAVNRLCHKLLSKLLGLDDYDAMLHEANHNVLAPYGRITLHIFWELNYDFLPNYCYNG***
**************************SALGVMHLKKLFAEFSHSVNHLSEKEKDDKLYNMLPLFCKVFGNSNSADMTDKFRDVHQFCDHVSRLMVTKVCQRASNQSTEIASCAIAKFLEIENSEESSSGWMLLSTLNLLAAGDVSLVEVMTKASLPSTLVKCLYLFFDLPQMNEEEANITDVNSDFTPRERRILLQKIFVQLLVRLCSHSAPAEELSNKDDLTLLFSAITSLCPPYNVIWRKSAAEILMSLSSQALTPKVVQYVHDKGCIALCIENMTRRKGQDLTPLEIVEMFVSVFCFLKDSSEVSQILLKDFKEAHGYTFLKNFLINLENDRSSEAQEAIRNLILMIATLSMCGYVELRPNAASMGCIFQILGFCMPQPSGRGKFKLRSLDGRKKNDSELEGLLAVNRLCHKLLSKLLGLDDYDAMLHEANHNVLAPYGRITLHIFWELNYDFLPNYCYNGATN
***************************ALGVMHLKKLFAEFSHSVNHLSEKEKDDKLYNMLPLFCKVFGNSNSADMTDKFRDVHQFCDHVSRLMVTKVCQRASNQSTEIASCAIAKFLEIENSEESSSGWMLLSTLNLLAAGDVSLVEVMTKASLPSTLVKCLYLFFDLPQMNE*********SDFTPRERRILLQKIFVQLLVRLCSHSAPAEELSNKDDLTLLFSAITSLCPPYNVIWRKSAAEILMSLSSQALTPKVVQYVHDKGCIALCIENMTRRKGQDLTPLEIVEMFVSVFCFLKDSSEVSQILLKDFKEAHGYTFLKNFLINLENDRSSEAQEAIRNLILMIATLSMCGYVELRPNAASMGCIFQILGFCMPQPSGRGKFKLRSLDGRKKNDSELEGLLAVNRLCHKLLSKLLGLDDYDAMLHEANHNVLAPYGRITLHIFWELNYDFLPNYCYNGA**
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MNIVRKLRSGSTGGVAPSSHEDSSQHSALGVMHLKKLFAEFSHSVNHLSEKEKDDKLYNMLPLFCKVFGNSNSADMTDKFRDVHQFCDHVSRLMVTKVCQRASNQSTEIASCAIAKFLEIENSEESSSGWMLLSTLNLLAAGDVSLVEVMTKASLPSTLVKCLYLFFDLPQMNEEEANITDVNSDFTPRERRILLQKIFVQLLVRLCSHSAPAEELSNKDDLTLLFSAITSLCPPYNVIWRKSAAEILMSLSSQALTPKVVQYVHDKGCIALCIENMTRRKGQDLTPLEIVEMFVSVFCFLKDSSEVSQILLKDFKEAHGYTFLKNFLINLENDRSSEAQEAIRNLILMIATLSMCGYVELRPNAASMGCIFQILGFCMPQPSGRGKFKLRSLDGRKKNDSELEGLLAVNRLCHKLLSKLLGLDDYDAMLHEANHNVLAPYGRITLHIFWELNYDFLPNYCYNGATN
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query467 2.2.26 [Sep-21-2011]
Q8IZQ1 3526 WD repeat and FYVE domain yes N/A 0.802 0.106 0.515 1e-112
Q6VNB8 3508 WD repeat and FYVE domain yes N/A 0.802 0.106 0.512 1e-112
Q7TMB8 1253 Cytoplasmic FMR1-interact no N/A 0.141 0.052 0.772 1e-26
Q90YM8 1253 Cytoplasmic FMR1-interact no N/A 0.141 0.052 0.803 1e-26
Q7L576 1253 Cytoplasmic FMR1-interact no N/A 0.141 0.052 0.772 1e-26
Q299G2 1291 Cytoplasmic FMR1-interact no N/A 0.141 0.051 0.787 2e-25
Q9VF87 1291 Cytoplasmic FMR1-interact no N/A 0.141 0.051 0.787 2e-25
Q5R414 1253 Cytoplasmic FMR1-interact no N/A 0.141 0.052 0.742 1e-24
Q96F07 1278 Cytoplasmic FMR1-interact no N/A 0.141 0.051 0.742 1e-24
Q5SQX6 1253 Cytoplasmic FMR1-interact no N/A 0.141 0.052 0.742 1e-24
>sp|Q8IZQ1|WDFY3_HUMAN WD repeat and FYVE domain-containing protein 3 OS=Homo sapiens GN=WDFY3 PE=1 SV=2 Back     alignment and function desciption
 Score =  407 bits (1046), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 199/386 (51%), Positives = 276/386 (71%), Gaps = 11/386 (2%)

Query: 1   MNIVRKLRSGSTGGVAPSSHEDSSQHSALGVMHLKKLFAEFSHSVNHLSEKEKDDKLYNM 60
           MN+V+++         P   E S Q +ALG+MHL++LF E  H   H+++KE+++KLY M
Sbjct: 1   MNMVKRIMG------RPRQEECSPQDNALGLMHLRRLFTELCHPPRHMTQKEQEEKLYMM 54

Query: 61  LPLFCKVFGNSNSADMTDKFRDVHQFCDHVSRLMVTKVCQRASNQSTEIASCAIAKFLEI 120
           LP+F +VFGN+    MT+KF D+ QF   VSRLMVT++ +RASN+STE AS AI +FLEI
Sbjct: 55  LPVFNRVFGNAPPNTMTEKFSDLLQFTTQVSRLMVTEIRRRASNKSTEAASRAIVQFLEI 114

Query: 121 ENSEESSSGWMLLSTLNLLAAGDVSLVEVMTKASLPSTLVKCLYLFFDLPQMNEEEANIT 180
             SEE+S GWMLL+T+NLLA+     V+ MT  S+PSTLVKCLYLFFDLP + E    + 
Sbjct: 115 NQSEEASRGWMLLTTINLLASSGQKTVDCMTTMSVPSTLVKCLYLFFDLPHVPEA---VG 171

Query: 181 DVNSDFTPRERRILLQKIFVQLLVRLCSHSAPAEELSNKDDLTLLFSAITSLCPPYNVIW 240
              ++    ERR LLQK+FVQ+LV+LCS  +PAEEL+ KDDL LLFSAITS CPPYN+ W
Sbjct: 172 GAQNELPLAERRGLLQKVFVQILVKLCSFVSPAEELAQKDDLQLLFSAITSWCPPYNLPW 231

Query: 241 RKSAAEILMSLSSQALTPKVVQYVHDKGCIALCIENMTRRKGQDLTPLEIVEMFVSVFCF 300
           RKSA E+LM++S   L+  VV+Y+H+K C++ C++NM  ++  DL+PLEIVEMF  + CF
Sbjct: 232 RKSAGEVLMTISRHGLSVNVVKYIHEKECLSTCVQNM--QQSDDLSPLEIVEMFAGLSCF 289

Query: 301 LKDSSEVSQILLKDFKEAHGYTFLKNFLINLENDRSSEAQEAIRNLILMIATLSMCGYVE 360
           LKDSS+VSQ LL DF+   GY FL + L+ LE  + +E+++A+++L+ +I +L+  G  E
Sbjct: 290 LKDSSDVSQTLLDDFRIWQGYNFLCDLLLRLEQAKEAESKDALKDLVNLITSLTTYGVSE 349

Query: 361 LRPNAASMGCIFQILGFCMPQPSGRG 386
           L+P   + G  F + GF +PQP+G+G
Sbjct: 350 LKPAGITTGAPFLLPGFAVPQPAGKG 375

Homo sapiens (taxid: 9606)
>sp|Q6VNB8|WDFY3_MOUSE WD repeat and FYVE domain-containing protein 3 OS=Mus musculus GN=Wdfy3 PE=1 SV=1 Back     alignment and function description
>sp|Q7TMB8|CYFP1_MOUSE Cytoplasmic FMR1-interacting protein 1 OS=Mus musculus GN=Cyfip1 PE=1 SV=1 Back     alignment and function description
>sp|Q90YM8|CYFP1_DANRE Cytoplasmic FMR1-interacting protein 1 homolog OS=Danio rerio GN=cyfip1 PE=2 SV=1 Back     alignment and function description
>sp|Q7L576|CYFP1_HUMAN Cytoplasmic FMR1-interacting protein 1 OS=Homo sapiens GN=CYFIP1 PE=1 SV=1 Back     alignment and function description
>sp|Q299G2|CYFIP_DROPS Cytoplasmic FMR1-interacting protein OS=Drosophila pseudoobscura pseudoobscura GN=Sra-1 PE=3 SV=1 Back     alignment and function description
>sp|Q9VF87|CYFIP_DROME Cytoplasmic FMR1-interacting protein OS=Drosophila melanogaster GN=Sra-1 PE=1 SV=1 Back     alignment and function description
>sp|Q5R414|CYFP2_PONAB Cytoplasmic FMR1-interacting protein 2 OS=Pongo abelii GN=CYFIP2 PE=2 SV=1 Back     alignment and function description
>sp|Q96F07|CYFP2_HUMAN Cytoplasmic FMR1-interacting protein 2 OS=Homo sapiens GN=CYFIP2 PE=1 SV=2 Back     alignment and function description
>sp|Q5SQX6|CYFP2_MOUSE Cytoplasmic FMR1-interacting protein 2 OS=Mus musculus GN=Cyfip2 PE=1 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query467
189234451 3381 PREDICTED: similar to blue cheese CG1400 0.822 0.113 0.682 1e-156
270002019 3378 hypothetical protein TcasGA2_TC000957 [T 0.822 0.113 0.682 1e-155
345481394 3449 PREDICTED: LOW QUALITY PROTEIN: WD repea 0.944 0.127 0.612 1e-148
307206623 3441 WD repeat and FYVE domain-containing pro 0.903 0.122 0.626 1e-147
332020815 3429 WD repeat and FYVE domain-containing pro 0.903 0.123 0.623 1e-147
380014506 4216 PREDICTED: LOW QUALITY PROTEIN: WD repea 0.950 0.105 0.591 1e-146
328778420 4136 PREDICTED: WD repeat and FYVE domain-con 0.950 0.107 0.591 1e-146
383859858 4136 PREDICTED: WD repeat and FYVE domain-con 0.929 0.104 0.591 1e-145
357622950 3478 hypothetical protein KGM_22003 [Danaus p 0.822 0.110 0.642 1e-144
242010104 3546 WD repeat and FYVE domain-containing pro 0.817 0.107 0.648 1e-143
>gi|189234451|ref|XP_967488.2| PREDICTED: similar to blue cheese CG14001-PA [Tribolium castaneum] Back     alignment and taxonomy information
 Score =  556 bits (1433), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 267/391 (68%), Positives = 325/391 (83%), Gaps = 7/391 (1%)

Query: 1   MNIVRKLRSGSTGGVAPSSHEDS-----SQHSALGVMHLKKLFAEFSHSVNHLSEKEKDD 55
           MNI+RKLR G  G  + SS + S     S H+ LG+MHLKKLF+E++H  + L+++E+DD
Sbjct: 1   MNIMRKLRGGGGGTPSASSSDISDGGPGSPHTQLGLMHLKKLFSEYTHPSHPLTDQERDD 60

Query: 56  KLYNMLPLFCKVFGNSNSADMTDKFRDVHQFCDHVSRLMVTKVCQRASNQSTEIASCAIA 115
           KLYNMLPLFCKVFG+S + DM +KF D+  FC  VS LMV+++ +RASNQSTE ASCAIA
Sbjct: 61  KLYNMLPLFCKVFGSSPTCDMNEKFWDILAFCHQVSLLMVSEIRKRASNQSTEAASCAIA 120

Query: 116 KFLEIENSEESSSGWMLLSTLNLLAAGDVSLVEVMTKASLPSTLVKCLYLFFDLPQMNEE 175
           KFLEIEN EESS+GWMLLSTLNLLAAGD +LV+VM++ S+PSTLVKCLYLFFDLP+M+E+
Sbjct: 121 KFLEIENCEESSNGWMLLSTLNLLAAGDATLVQVMSEVSVPSTLVKCLYLFFDLPEMSEQ 180

Query: 176 EANITDVNSDFTPRERRILLQKIFVQLLVRLCSHSAPAEELSNKDDLTLLFSAITSLCPP 235
           EAN  D +SDFTPRERRILLQKIFVQLLVRLCSH  PAEEL+ KDDLTLLFSAITS CP 
Sbjct: 181 EANSKDSSSDFTPRERRILLQKIFVQLLVRLCSHRIPAEELARKDDLTLLFSAITSWCPS 240

Query: 236 YNVIWRKSAAEILMSLSSQALTPKVVQYVHDKGCIALCIENMTRRKGQDLTPLEIVEMFV 295
           +NV+WRKSAAE+LM+LS   LTP VV Y+H KGC+ALCIENM R    +L PLE+VEMFV
Sbjct: 241 HNVMWRKSAAEVLMTLSRHGLTPPVVGYIHSKGCVALCIENMKRVP--ELAPLELVEMFV 298

Query: 296 SVFCFLKDSSEVSQILLKDFKEAHGYTFLKNFLINLENDRSSEAQEAIRNLILMIATLSM 355
           +VFCFLKDSSEVS  LL DF++A GY FL +FL+ LE+++SSEAQE+IRNL+LM+ +L M
Sbjct: 299 TVFCFLKDSSEVSSTLLDDFRQAQGYLFLSDFLLKLESEKSSEAQESIRNLVLMVTSLCM 358

Query: 356 CGYVELRPNAASMGCIFQILGFCMPQPSGRG 386
           CGY+EL+P+ AS G +FQ+ GF +PQPSGRG
Sbjct: 359 CGYIELKPSQASTGSLFQMQGFTLPQPSGRG 389

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota
>gi|270002019|gb|EEZ98466.1| hypothetical protein TcasGA2_TC000957 [Tribolium castaneum] Back     alignment and taxonomy information
>gi|345481394|ref|XP_003424355.1| PREDICTED: LOW QUALITY PROTEIN: WD repeat and FYVE domain-containing protein 3-like [Nasonia vitripennis] Back     alignment and taxonomy information
>gi|307206623|gb|EFN84602.1| WD repeat and FYVE domain-containing protein 3 [Harpegnathos saltator] Back     alignment and taxonomy information
>gi|332020815|gb|EGI61213.1| WD repeat and FYVE domain-containing protein 3 [Acromyrmex echinatior] Back     alignment and taxonomy information
>gi|380014506|ref|XP_003691270.1| PREDICTED: LOW QUALITY PROTEIN: WD repeat and FYVE domain-containing protein 3-like [Apis florea] Back     alignment and taxonomy information
>gi|328778420|ref|XP_003249488.1| PREDICTED: WD repeat and FYVE domain-containing protein 3-like [Apis mellifera] Back     alignment and taxonomy information
>gi|383859858|ref|XP_003705409.1| PREDICTED: WD repeat and FYVE domain-containing protein 3-like [Megachile rotundata] Back     alignment and taxonomy information
>gi|357622950|gb|EHJ74292.1| hypothetical protein KGM_22003 [Danaus plexippus] Back     alignment and taxonomy information
>gi|242010104|ref|XP_002425816.1| WD repeat and FYVE domain-containing protein, putative [Pediculus humanus corporis] gi|212509749|gb|EEB13078.1| WD repeat and FYVE domain-containing protein, putative [Pediculus humanus corporis] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query467
FB|FBgn0043362 3489 bchs "blue cheese" [Drosophila 0.749 0.100 0.611 1.8e-111
UNIPROTKB|F1RW14 3527 WDFY3 "Uncharacterized protein 0.802 0.106 0.515 5.7e-100
UNIPROTKB|E1BRH2 3511 WDFY3 "Uncharacterized protein 0.802 0.106 0.515 1.2e-99
UNIPROTKB|E1BRH3 3529 WDFY3 "Uncharacterized protein 0.802 0.106 0.515 1.2e-99
ZFIN|ZDB-GENE-070705-153 3522 si:ch211-259k10.1 "si:ch211-25 0.802 0.106 0.512 2.5e-99
UNIPROTKB|Q8IZQ1 3526 WDFY3 "WD repeat and FYVE doma 0.802 0.106 0.515 2.5e-99
RGD|1307097 3505 Wdfy3 "WD repeat and FYVE doma 0.802 0.106 0.515 3.1e-99
UNIPROTKB|E2RLD7 3509 WDFY3 "Uncharacterized protein 0.802 0.106 0.515 3.1e-99
UNIPROTKB|J9PB38 3512 WDFY3 "Uncharacterized protein 0.802 0.106 0.515 3.1e-99
MGI|MGI:1096875 3508 Wdfy3 "WD repeat and FYVE doma 0.802 0.106 0.512 8.4e-99
FB|FBgn0043362 bchs "blue cheese" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 1098 (391.6 bits), Expect = 1.8e-111, Sum P(3) = 1.8e-111
 Identities = 217/355 (61%), Positives = 274/355 (77%)

Query:    34 LKKLFAEFSHSVNHLSEKEKDDKLYNMLPLFCKVFGNSNSADMTDKFRDVHQFCDHVSRL 93
             LKKLF E++H    LSE+E+DDKLY MLPLFCKVF +  S DM++KF DV  FC  VSRL
Sbjct:    65 LKKLFNEYTHPREPLSEQERDDKLYEMLPLFCKVFSSCPSNDMSEKFWDVVAFCQQVSRL 124

Query:    94 MVTKVCQRASNQSTEIASCAIAKFLEIENSEESSSGWMLLSTLNLLAAGDVSLVEVMTKA 153
             MV+++ +RASNQSTE AS AI KFLE+E +EE+SSGWMLL+TLNLLA GDVSL++VMT A
Sbjct:   125 MVSEIRKRASNQSTEAASIAIVKFLEVETTEETSSGWMLLATLNLLANGDVSLIQVMTAA 184

Query:   154 SLPSTLVKCLYLFFDLPQMNEEEANITD-VNSDFTPRERRILLQKIFVQLLVRLCSHSAP 212
             ++PSTLVKCLYLFFDLP + ++E +      S+F   ERR LLQK+FVQLLV+LCS+  P
Sbjct:   185 AVPSTLVKCLYLFFDLPIVEDDEPSADGGAVSEFNAHERRTLLQKVFVQLLVKLCSYPYP 244

Query:   213 AEELSNKDDLTLLFSAITSLCPPYNVIWRKSAAEILMSLSSQALTPKVVQYVHDKGCIAL 272
             AEEL+  DDLTLLFSAITS CP +N++WRK+AAEIL ++S   LT  VV Y+H KGC+AL
Sbjct:   245 AEELARMDDLTLLFSAITSPCPIHNIVWRKNAAEILTTISRNGLTDAVVSYIHSKGCMAL 304

Query:   273 CIENMTRRKGQDLTPLEIVEMFVSVFCFLKDSSEVSQILLKDFKEAHGYTFLKNFLINLE 332
             C++NM R    +  PLEIVEMFV+VFCFLKDSS+VSQIL+ DF+ + GY FL +FL+  +
Sbjct:   305 CVDNMQRLTFGN--PLEIVEMFVTVFCFLKDSSQVSQILMDDFRASQGYVFLSDFLLKFD 362

Query:   333 NDRSS--EAQEAIRNLILMIATLSMCGYVELRPNAASMGCIFQILGFCMPQPSGR 385
             N+RS   E Q AIRNL+LMI++L MCG+ ELRP A+     F++  F +PQ + R
Sbjct:   363 NNRSQSLEIQAAIRNLVLMISSLCMCGFYELRPPASQFNTAFKLQNFQLPQATSR 417
GO:0007041 "lysosomal transport" evidence=ISS
GO:0030424 "axon" evidence=NAS
GO:0005737 "cytoplasm" evidence=IDA
GO:0046872 "metal ion binding" evidence=IEA
GO:0022416 "chaeta development" evidence=IGI
GO:0050807 "regulation of synapse organization" evidence=IGI
GO:0048749 "compound eye development" evidence=IMP
GO:0048786 "presynaptic active zone" evidence=IDA
GO:0031594 "neuromuscular junction" evidence=IDA
GO:0008340 "determination of adult lifespan" evidence=IMP
GO:0031396 "regulation of protein ubiquitination" evidence=IMP
GO:0007409 "axonogenesis" evidence=IMP
UNIPROTKB|F1RW14 WDFY3 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|E1BRH2 WDFY3 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|E1BRH3 WDFY3 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-070705-153 si:ch211-259k10.1 "si:ch211-259k10.1" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|Q8IZQ1 WDFY3 "WD repeat and FYVE domain-containing protein 3" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
RGD|1307097 Wdfy3 "WD repeat and FYVE domain containing 3" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|E2RLD7 WDFY3 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|J9PB38 WDFY3 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
MGI|MGI:1096875 Wdfy3 "WD repeat and FYVE domain containing 3" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q8IZQ1WDFY3_HUMANNo assigned EC number0.51550.80290.1063yesN/A
Q6VNB8WDFY3_MOUSENo assigned EC number0.51290.80290.1068yesN/A

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query467
pfam05994 815 pfam05994, FragX_IP, Cytoplasmic Fragile-X interac 5e-22
PLN03099 1232 PLN03099, PIR, Protein PIR; Provisional 2e-04
>gnl|CDD|218846 pfam05994, FragX_IP, Cytoplasmic Fragile-X interacting family Back     alignment and domain information 
 Score = 99.0 bits (247), Expect = 5e-22
 Identities = 41/69 (59%), Positives = 49/69 (71%), Gaps = 3/69 (4%)

Query: 402 ELEGLLAVNRLCHKLLSK-LLGLDDYDAMLHEANHNVL--APYGRITLHIFWELNYDFLP 458
           ELE L+ + RL HKLLS+ L+ LD +D M  EANHN    +P  RI LH+FWELNYDFLP
Sbjct: 407 ELERLVDILRLTHKLLSEYLIPLDPFDDMFREANHNDSPNSPQSRILLHVFWELNYDFLP 466

Query: 459 NYCYNGATN 467
           NY YN + N
Sbjct: 467 NYFYNSSPN 475

CYFIP1/2 (Cytoplasmic fragile X mental retardation interacting protein) like proteins for a highly conserved protein family. The function of CYFIPs is unclear, but CYFIP interaction with fragile X mental retardation interacting protein (FMRP) involves the domain of FMRP which also mediating homo- and heteromerization. Length = 815
>gnl|CDD|215574 PLN03099, PIR, Protein PIR; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 467
KOG1788|consensus 2799 100.0
KOG3534|consensus 1253 99.92
PF05994 820 FragX_IP: Cytoplasmic Fragile-X interacting family 99.83
PLN03099 1232 PIR Protein PIR; Provisional 99.82
KOG1788|consensus 2799 97.36
PF10508 503 Proteasom_PSMB: Proteasome non-ATPase 26S subunit; 90.11
PF05804 708 KAP: Kinesin-associated protein (KAP) 84.64
KOG2160|consensus342 80.16
>KOG1788|consensus Back     alignment and domain information 
Probab=100.00  E-value=5.5e-53  Score=458.37  Aligned_cols=374  Identities=21%  Similarity=0.294  Sum_probs=316.4

Q ss_pred             HHHHHHHHHhhccCCCCChHHHHHHHhhhhhHHHHHhcCC-CchhhHHhhhhhhhhHHHHHHHHHHHHHHHhccCChHHH
Q psy7103          32 MHLKKLFAEFSHSVNHLSEKEKDDKLYNMLPLFCKVFGNS-NSADMTDKFRDVHQFCDHVSRLMVTKVCQRASNQSTEIA  110 (467)
Q Consensus        32 ~~Lrr~f~Ef~~~~~~~s~kEke~~L~~~LPLFckv~~~~-~~~~~v~~F~~~~~Fa~~vsr~lV~eI~k~~~~q~~e~A  110 (467)
                      .++||.|+||++   ++++||||.+++..+.-||++.+.+ ++++++++.++-+.|.|+++|++|++++|+.++      
T Consensus        70 ldfkrmweefrs---ssseeeKEaalnlTvlcfcrlvkvhanvdqlvTmlveqhIfsFvigrafvkdyekLkag------  140 (2799)
T KOG1788|consen   70 LDFKRMWEEFRS---SSSEEEKEAALNLTVLCFCRLVKVHANVDQLVTMLVEQHIFSFVIGRAFVKDYEKLKAG------  140 (2799)
T ss_pred             ccHHHHHHhchh---hccHHHHHHHHhhhheeeeeeeHHhhhhhhhhhhhhHhhHHHHhcCccccccchhhhcc------
Confidence            359999999988   6899999999999999999999987 999999999999999999999999999998643      


Q ss_pred             HHHHHHHhhHhcCCCCchhhhHHHHHHHHhcCChhHHHHHHhcCChhHHHHHHHHhhcCCCCChhh----hhccCCCCCC
Q psy7103         111 SCAIAKFLEIENSEESSSGWMLLSTLNLLAAGDVSLVEVMTKASLPSTLVKCLYLFFDLPQMNEEE----ANITDVNSDF  186 (467)
Q Consensus       111 ~~aI~~fl~~~~~e~~s~G~~LL~sl~lLs~~~~~~v~~m~~agLPStLVkcLYLffdlP~~~~~~----~~~~~~~s~~  186 (467)
                                     .++|.+||+|.+.|.+++.      ++.+||+++|||.|+|||+|...-..    -.+...+.+.
T Consensus       141 ---------------ss~ganLLtaeevlmsgpa------dKqSLldsgikcclihfdlaalAytvtstdltegatEved  199 (2799)
T KOG1788|consen  141 ---------------SSHGANLLTAEEVLMSGPA------DKQSLLDSGIKCCLIHFDLAALAYTVTSTDLTEGATEVED  199 (2799)
T ss_pred             ---------------ccccchhhhhhHHHhhCch------hhhccccccceehhhhhccHhhhhhhhhcccccCcchhhH
Confidence                           3789999999999988765      45789999999999999998644311    1112234455


Q ss_pred             chhHHHHHHHHHHHHHHHHHhcCCcccccccccCchhHHHHHHhCC------------CCCCccchhHHHHHHH--HHHh
Q psy7103         187 TPRERRILLQKIFVQLLVRLCSHSAPAEELSNKDDLTLLFSAITSL------------CPPYNVIWRKSAAEIL--MSLS  252 (467)
Q Consensus       187 ~~~e~r~~~q~~~vqiL~~Lc~~~~~~EeL~~~DdLqlLF~~~ts~------------cp~~n~~WR~~a~~vL--~~iS  252 (467)
                      +...++..+++++||||++|||+|+++|+|+|+|+|-+||.|+++.            +|.||++|||+|+|+|  ..++
T Consensus       200 eekknnekvegsvvqIMkaLasfpsaaqsLiedDsLllLFvmvangs~~~fs~~k~glVaehNiqlhklamqiLglllvn  279 (2799)
T KOG1788|consen  200 EEKKNNEKVEGSVVQIMKALASFPSAAQSLIEDDSLLLLFVMVANGSLMAFSRFKVGLVAEHNIQLHKLAMQILGLLLVN  279 (2799)
T ss_pred             HHhhhhhhhhhHHHHHHHHHhcCchHHHHhhccccHHHHHHHhccccchhhhhhccchhhhhHHHHHHHHHHHHhHHhhc
Confidence            5677999999999999999999999999999999999999999875            9999999999999999  5559


Q ss_pred             hcCCChhhHHHHhhhcHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHhhhchhhhHHHHHHHHhccChHHHHHHHHhhc
Q psy7103         253 SQALTPKVVQYVHDKGCIALCIENMTRRKGQDLTPLEIVEMFVSVFCFLKDSSEVSQILLKDFKEAHGYTFLKNFLINLE  332 (467)
Q Consensus       253 ~~~lt~~vi~YI~~k~cI~~~l~nl~~~~~~~~s~~e~ve~~~~v~~fLkdS~~~S~~LlddF~~~~GY~fL~~flLr~e  332 (467)
                      |||.|..+|+|.|-++|+.+.++|+.-.+||.-...-+++.+.+..||++.+....-+|+|||+++|||.||+||+|+++
T Consensus       280 DngsTaayIrkhhliKvllmaVKnfdpacgdsaytqgivdlllecvelsyrpeyggvrLlddirnAhGYhflvqFaLkls  359 (2799)
T KOG1788|consen  280 DNGSTAAYIRKHHLIKVLLMAVKNFDPACGDSAYTQGIVDLLLECVELSYRPEYGGVRLLDDIRNAHGYHFLVQFALKLS  359 (2799)
T ss_pred             CCccHHHHHHHHHHHHHHHHHHhhcCCCCCchHhHHHHHHHHHHHHHHhcCcccchhHHHHHHHhccCeeeHHHHHHHhc
Confidence            99988888888888999999999988888887444445555555555666666688899999999999999999999988


Q ss_pred             cC-----------------------------------CChhHHHHHHHHHHHHHHhHhhcccccccCCCCCCCCcccCCC
Q psy7103         333 ND-----------------------------------RSSEAQEAIRNLILMIATLSMCGYVELRPNAASMGCIFQILGF  377 (467)
Q Consensus       333 ~~-----------------------------------~~~e~~~~l~~Ll~li~sLt~cG~~ELk~~~~~s~~~~Q~~gF  377 (467)
                      +.                                   ......|++++||++..+|+..|+.|+.|.-.+-.+.-|+|||
T Consensus       360 s~pk~~~f~~~~~ds~~~~p~~~~d~et~ns~~n~Dfei~~f~p~lsrlLdvlvtLaqtGpfEispqytS~~sqtkltgf  439 (2799)
T KOG1788|consen  360 SMPKDIVFAFDHNDSKKQPPLQNDDSETLNSRQNDDFEIKHFSPALSRLLDVLVTLAQTGPFEISPQYTSLLSQTKLTGF  439 (2799)
T ss_pred             cCCcCceeeccccccccCCccccccccccccccccchhhhhccHHHHHHHHHHHHHHhcCCcccCcccccccccccCccc
Confidence            22                                   1124567899999999999999999999996554467899999


Q ss_pred             cCCCCCCC-----Cccc------cccccccccchHHHHHHHH-------HHHHHHHHHHhhhCCCchHHHHHhhcccc
Q psy7103         378 CMPQPSGR-----GKFK------LRSLDGRKKNDSELEGLLA-------VNRLCHKLLSKLLGLDDYDAMLHEANHNV  437 (467)
Q Consensus       378 ~~p~p~~~-----G~~t------VrNl~AFq~l~veL~~l~~-------~nrL~h~lLs~~l~ld~f~~~l~E~n~~v  437 (467)
                      ..|.|.++     |. +      ||||.|||++|..|.+.-.       +||| |++.+.|-+.|-.++=+.-+.-.|
T Consensus       440 srpitasn~~~ydel-seqgsgkVkdLeAvqmLqdiFLkaenkdlqaeVlnrm-fkIftshpeNYricqelytvpllv  515 (2799)
T KOG1788|consen  440 SRPITASNNNRYDEL-SEQGSGKVKDLEAVQMLQDIFLKAENKDLQAEVLNRM-FKIFTSHPENYRICQELYTVPLLV  515 (2799)
T ss_pred             ccCcCCCCccccccc-hhhcCCcccchHHHHHHHHHHHHhcCcchhhHHHHHH-HHHhccChHHhhHHhhccccchhh
Confidence            99999998     66 5      9999999999999988642       7888 999999988887776655555444

>KOG3534|consensus Back     alignment and domain information
>PF05994 FragX_IP: Cytoplasmic Fragile-X interacting family; InterPro: IPR008081 Cytoplasmic fragile X mental retardation protein (FMRP) interacting protein belongs to a highly conserved but, as yet, functionally uncharacterised family Back     alignment and domain information
>PLN03099 PIR Protein PIR; Provisional Back     alignment and domain information
>KOG1788|consensus Back     alignment and domain information
>PF10508 Proteasom_PSMB: Proteasome non-ATPase 26S subunit; InterPro: IPR019538 The 26S proteasome is an enzymatic complex that degrades ubiquitinated proteins in eukaryotic cells Back     alignment and domain information
>PF05804 KAP: Kinesin-associated protein (KAP) Back     alignment and domain information
>KOG2160|consensus Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query467
3p8c_A 1253 Structure And Control Of The Actin Regulatory Wave 2e-22
>pdb|3P8C|A Chain A, Structure And Control Of The Actin Regulatory Wave Complex Length = 1253 Back     alignment and structure 
Iteration: 1

 Score =  103 bits (258), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 44/66 (66%), Positives = 49/66 (74%)
Query: 402 ELEGLLAVNRXXXXXXXXXXXXDDYDAMLHEANHNVLAPYGRITLHIFWELNYDFLPNYC 461
           EL+GLL +NR            D +DAM  EANHNV APYGRITLH+FWELNYDFLPNYC
Sbjct: 797 ELDGLLEINRMTHKLLSRYLTLDGFDAMFREANHNVSAPYGRITLHVFWELNYDFLPNYC 856
Query: 462 YNGATN 467
           YNG+TN
Sbjct: 857 YNGSTN 862

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query467
3p8c_A 1253 Cytoplasmic FMR1-interacting protein 1; actin poly 1e-27
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-08
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-05
>3p8c_A Cytoplasmic FMR1-interacting protein 1; actin polymerization, protein binding; 2.29A {Homo sapiens} Length = 1253 Back     alignment and structure
 Score =  115 bits (289), Expect = 1e-27
 Identities = 51/66 (77%), Positives = 58/66 (87%)

Query: 402 ELEGLLAVNRLCHKLLSKLLGLDDYDAMLHEANHNVLAPYGRITLHIFWELNYDFLPNYC 461
           EL+GLL +NR+ HKLLS+ L LD +DAM  EANHNV APYGRITLH+FWELNYDFLPNYC
Sbjct: 797 ELDGLLEINRMTHKLLSRYLTLDGFDAMFREANHNVSAPYGRITLHVFWELNYDFLPNYC 856

Query: 462 YNGATN 467
           YNG+TN
Sbjct: 857 YNGSTN 862
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query467
3p8c_A 1253 Cytoplasmic FMR1-interacting protein 1; actin poly 99.84
4hxt_A252 De novo protein OR329; structural genomics, PSI-bi 96.32
4db6_A210 Armadillo repeat protein; solenoid repeat, armadil 96.2
4hxt_A252 De novo protein OR329; structural genomics, PSI-bi 95.43
4db8_A252 Armadillo-repeat protein; solenoid repeat, de novo 95.41
1xqr_A296 HSPBP1 protein; armadillo repeat, superhelical twi 94.71
3tpo_A529 Importin subunit alpha-2; nuclear import, protein 94.41
4db8_A252 Armadillo-repeat protein; solenoid repeat, de novo 94.05
2jdq_A450 Importin alpha-1 subunit; transport, PB2 subunit, 94.04
1wa5_B530 Importin alpha subunit; nuclear transport/complex, 93.97
4b8j_A528 Importin subunit alpha-1A; transport protein, nucl 93.94
4b8j_A528 Importin subunit alpha-1A; transport protein, nucl 93.61
1wa5_B530 Importin alpha subunit; nuclear transport/complex, 93.52
3tpo_A529 Importin subunit alpha-2; nuclear import, protein 93.04
2jdq_A450 Importin alpha-1 subunit; transport, PB2 subunit, 91.25
3ul1_B510 Importin subunit alpha-2; arm repeat, armadillo re 90.94
3ul1_B510 Importin subunit alpha-2; arm repeat, armadillo re 90.22
1jdh_A529 Beta-catenin; beta-catenin, protein-protein comple 90.14
2z6h_A 644 Catenin beta-1, beta-catenin; C-terminal domain, a 89.91
3nmz_A458 APC variant protein; protein-protein complex, arma 89.34
3now_A810 UNC-45 protein, SD10334P; armadillo repeat, HSP90, 89.06
3nmw_A354 APC variant protein; ARMADIILO repeats domain, cel 88.76
1xqr_A296 HSPBP1 protein; armadillo repeat, superhelical twi 88.76
1jdh_A529 Beta-catenin; beta-catenin, protein-protein comple 88.61
1xm9_A457 Plakophilin 1; armadillo repeat, cell adhesion; 2. 88.0
2z6h_A 644 Catenin beta-1, beta-catenin; C-terminal domain, a 87.59
2z6g_A 780 B-catenin; FULL-length, beta-catenin, cell adhesio 86.86
4db6_A210 Armadillo repeat protein; solenoid repeat, armadil 86.06
1xm9_A 457 Plakophilin 1; armadillo repeat, cell adhesion; 2. 83.74
3now_A810 UNC-45 protein, SD10334P; armadillo repeat, HSP90, 82.92
2z6g_A 780 B-catenin; FULL-length, beta-catenin, cell adhesio 81.37
3grl_A 651 General vesicular transport factor P115; vesicle t 81.27
>3p8c_A Cytoplasmic FMR1-interacting protein 1; actin polymerization, protein binding; 2.29A {Homo sapiens} Back     alignment and structure
Probab=99.84  E-value=5.4e-22  Score=224.73  Aligned_cols=68  Identities=75%  Similarity=1.316  Sum_probs=67.4

Q ss_pred             hHHHHHHHHHHHHHHHHHHhhhCCCchHHHHHhhccccccCCchHHHHHHHHHhhcccccccccCCCC
Q psy7103         400 DSELEGLLAVNRLCHKLLSKLLGLDDYDAMLHEANHNVLAPYGRITLHIFWELNYDFLPNYCYNGATN  467 (467)
Q Consensus       400 ~veL~~l~~~nrL~h~lLs~~l~ld~f~~~l~E~n~~v~s~~gri~~hv~~el~~d~~pn~~~n~~t~  467 (467)
                      +|||++++++||+||+|||+|++|||||+|++|||||+++|+||||+||||||+|||+||||||++||
T Consensus       795 iveLe~ll~i~r~tH~LLse~l~Ld~F~~ml~Ean~~vss~~gRIt~hv~~eL~~Df~PNy~yn~~T~  862 (1253)
T 3p8c_A          795 IVELDGLLEINRMTHKLLSRYLTLDGFDAMFREANHNVSAPYGRITLHVFWELNYDFLPNYCYNGSTN  862 (1253)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTSCCCCHHHHHHHHTTCSSSSSCHHHHHHHHHHHHTHHHHEEEETTTT
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHhccCCCCcchhHHHHHHHHHhccccccceecCccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999997
>4hxt_A De novo protein OR329; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.95A {Artificial gene} Back     alignment and structure
>4db6_A Armadillo repeat protein; solenoid repeat, armadillo repeat motif, de novo protein; 1.80A {Synthetic construct} PDB: 4db9_A 4dba_A Back     alignment and structure
>4hxt_A De novo protein OR329; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.95A {Artificial gene} Back     alignment and structure
>4db8_A Armadillo-repeat protein; solenoid repeat, de novo protein; 2.50A {Synthetic construct} Back     alignment and structure
>1xqr_A HSPBP1 protein; armadillo repeat, superhelical twist, chaperone; 2.10A {Homo sapiens} SCOP: a.118.1.21 PDB: 1xqs_A* Back     alignment and structure
>3tpo_A Importin subunit alpha-2; nuclear import, protein transport; 2.10A {Mus musculus} PDB: 1qgk_B 1qgr_B Back     alignment and structure
>4db8_A Armadillo-repeat protein; solenoid repeat, de novo protein; 2.50A {Synthetic construct} Back     alignment and structure
>2jdq_A Importin alpha-1 subunit; transport, PB2 subunit, nuclear protein, protein transport, armadillo repeats; 2.2A {Homo sapiens} PDB: 3tj3_A Back     alignment and structure
>1wa5_B Importin alpha subunit; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1un0_A 2c1t_A 1bk5_A 1ee5_A 1bk6_A 1ee4_A Back     alignment and structure
>4b8j_A Importin subunit alpha-1A; transport protein, nuclear localization signal; 2.00A {Oryza sativa japonica group} PDB: 4b8o_A 2yns_A 4b8p_A Back     alignment and structure
>4b8j_A Importin subunit alpha-1A; transport protein, nuclear localization signal; 2.00A {Oryza sativa japonica group} PDB: 4b8o_A 2yns_A 4b8p_A Back     alignment and structure
>1wa5_B Importin alpha subunit; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1un0_A 2c1t_A 1bk5_A 1ee5_A 1bk6_A 1ee4_A Back     alignment and structure
>3tpo_A Importin subunit alpha-2; nuclear import, protein transport; 2.10A {Mus musculus} PDB: 1qgk_B 1qgr_B Back     alignment and structure
>2jdq_A Importin alpha-1 subunit; transport, PB2 subunit, nuclear protein, protein transport, armadillo repeats; 2.2A {Homo sapiens} PDB: 3tj3_A Back     alignment and structure
>3ul1_B Importin subunit alpha-2; arm repeat, armadillo repeat, nuclear transport, nuclear LOC signal binding, importin beta binding; 1.90A {Mus musculus} PDB: 3ukx_B 3uky_B 3ukz_B 3ukw_B 3ul0_B 3oqs_A 3rz9_A 3rzx_A 3uvu_A 1q1s_C 1q1t_C 3knd_A 1ejy_I 1iq1_C 1ejl_I 1pjn_B 1pjm_B 3q5u_A 3fey_C 3fex_C ... Back     alignment and structure
>3ul1_B Importin subunit alpha-2; arm repeat, armadillo repeat, nuclear transport, nuclear LOC signal binding, importin beta binding; 1.90A {Mus musculus} PDB: 3ukx_B 3uky_B 3ukz_B 3ukw_B 3ul0_B 3oqs_A 3rz9_A 3rzx_A 3uvu_A 1q1s_C 1q1t_C 3knd_A 1ejy_I 1iq1_C 1ejl_I 1pjn_B 1pjm_B 3q5u_A 3fey_C 3fex_C ... Back     alignment and structure
>1jdh_A Beta-catenin; beta-catenin, protein-protein complex, transcription; 1.90A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qz7_A 1g3j_A 1th1_A* 1i7w_A* 1i7x_A 1jpp_A 1m1e_A 1v18_A* 3oux_A 3ouw_A 1jpw_A 3tx7_A* 2gl7_A 1t08_A 1luj_A 2bct_A 3bct_A* 3ifq_A* 3sla_A 3sl9_A Back     alignment and structure
>2z6h_A Catenin beta-1, beta-catenin; C-terminal domain, activator, alternative splicing, cell adhesion, cytoplasm, cytoskeleton, disease mutation, nucleus; 2.20A {Homo sapiens} Back     alignment and structure
>3nmz_A APC variant protein; protein-protein complex, armadillo repeats, cell adhesion-CE complex; 3.01A {Homo sapiens} Back     alignment and structure
>3now_A UNC-45 protein, SD10334P; armadillo repeat, HSP90, myosin, tetra-tricopeptide repeat, binding protein required for myosin function; 2.99A {Drosophila melanogaster} Back     alignment and structure
>3nmw_A APC variant protein; ARMADIILO repeats domain, cell adhesion-cell cycle complex; 1.60A {Homo sapiens} PDB: 3nmx_A 3t7u_A 3au3_A 3qhe_A Back     alignment and structure
>1xqr_A HSPBP1 protein; armadillo repeat, superhelical twist, chaperone; 2.10A {Homo sapiens} SCOP: a.118.1.21 PDB: 1xqs_A* Back     alignment and structure
>1jdh_A Beta-catenin; beta-catenin, protein-protein complex, transcription; 1.90A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qz7_A 1g3j_A 1th1_A* 1i7w_A* 1i7x_A 1jpp_A 1m1e_A 1v18_A* 3oux_A 3ouw_A 1jpw_A 3tx7_A* 2gl7_A 1t08_A 1luj_A 2bct_A 3bct_A* 3ifq_A* 3sla_A 3sl9_A Back     alignment and structure
>1xm9_A Plakophilin 1; armadillo repeat, cell adhesion; 2.80A {Homo sapiens} SCOP: a.118.1.24 Back     alignment and structure
>2z6h_A Catenin beta-1, beta-catenin; C-terminal domain, activator, alternative splicing, cell adhesion, cytoplasm, cytoskeleton, disease mutation, nucleus; 2.20A {Homo sapiens} Back     alignment and structure
>2z6g_A B-catenin; FULL-length, beta-catenin, cell adhesion; 3.40A {Danio rerio} Back     alignment and structure
>4db6_A Armadillo repeat protein; solenoid repeat, armadillo repeat motif, de novo protein; 1.80A {Synthetic construct} PDB: 4db9_A 4dba_A Back     alignment and structure
>1xm9_A Plakophilin 1; armadillo repeat, cell adhesion; 2.80A {Homo sapiens} SCOP: a.118.1.24 Back     alignment and structure
>3now_A UNC-45 protein, SD10334P; armadillo repeat, HSP90, myosin, tetra-tricopeptide repeat, binding protein required for myosin function; 2.99A {Drosophila melanogaster} Back     alignment and structure
>2z6g_A B-catenin; FULL-length, beta-catenin, cell adhesion; 3.40A {Danio rerio} Back     alignment and structure
>3grl_A General vesicular transport factor P115; vesicle transport, membrane trafficking, membrane tethering, fusion, snare, RAB GTPase, armadillo repeats; 2.00A {Bos taurus} PDB: 3gq2_A 2w3c_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query467
d1q1sc_434 Importin alpha {Mouse (Mus musculus) [TaxId: 10090 95.97
d1wa5b_503 Karyopherin alpha {Baker's yeast (Saccharomyces ce 94.65
d1xqra1264 Hsp70-binding protein 1 (HspBP1) {Human (Homo sapi 92.2
d1q1sc_434 Importin alpha {Mouse (Mus musculus) [TaxId: 10090 91.89
d1wa5b_503 Karyopherin alpha {Baker's yeast (Saccharomyces ce 91.86
d1xqra1264 Hsp70-binding protein 1 (HspBP1) {Human (Homo sapi 87.51
d1jdha_529 beta-Catenin {Human (Homo sapiens) [TaxId: 9606]} 84.64
>d1q1sc_ a.118.1.1 (C:) Importin alpha {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: ARM repeat
family: Armadillo repeat
domain: Importin alpha
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.97  E-value=0.54  Score=42.85  Aligned_cols=162  Identities=12%  Similarity=0.100  Sum_probs=113.0

Q ss_pred             hhHHHHHHHHhcCChhHHHHHHhcCChhHHHHHHHHhhcCCCCChhhhhccCCCCCCchhHHHHHHHHHHHHHHHHHhcC
Q psy7103         130 WMLLSTLNLLAAGDVSLVEVMTKASLPSTLVKCLYLFFDLPQMNEEEANITDVNSDFTPRERRILLQKIFVQLLVRLCSH  209 (467)
Q Consensus       130 ~~LL~sl~lLs~~~~~~v~~m~~agLPStLVkcLYLffdlP~~~~~~~~~~~~~s~~~~~e~r~~~q~~~vqiL~~Lc~~  209 (467)
                      ..-+.++.-|+.++.+....+++.|....|+++|.       .++                  ..++.....+|.+||.+
T Consensus       248 ~~al~~l~~l~~~~~~~~~~~~~~~~~~~l~~ll~-------~~~------------------~~v~~~a~~~L~~l~~~  302 (434)
T d1q1sc_         248 TPALRAIGNIVTGTDEQTQKVIDAGALAVFPSLLT-------NPK------------------TNIQKEATWTMSNITAG  302 (434)
T ss_dssp             HHHHHHHHHHTTSCHHHHHHHHHTTGGGGHHHHTT-------CSS------------------HHHHHHHHHHHHHHTTS
T ss_pred             hchhhhhhhHHhhhhHHHHHHHhccccchHHHhhc-------ccc------------------hhhhHHHHHHHhhhccc
Confidence            34567777788877776778889999999988752       111                  22455667788899986


Q ss_pred             Ccc-cccccccCchhHHHHHHhCCCCCCccchhHHHHHHHHHHhhcCCChhhHHHHhhhcHHHHHHHHHhhcCCCCCChH
Q psy7103         210 SAP-AEELSNKDDLTLLFSAITSLCPPYNVIWRKSAAEILMSLSSQALTPKVVQYVHDKGCIALCIENMTRRKGQDLTPL  288 (467)
Q Consensus       210 ~~~-~EeL~~~DdLqlLF~~~ts~cp~~n~~WR~~a~~vL~~iS~~~lt~~vi~YI~~k~cI~~~l~nl~~~~~~~~s~~  288 (467)
                      ... .+.+.+..-++.|+..+.+    .+..-|+.|..+|..++.+ -++..+.++.+.|+|..+++-+...  +   +.
T Consensus       303 ~~~~~~~i~~~~~i~~li~~l~~----~~~~v~~~a~~~l~nl~~~-~~~~~~~~l~~~~~i~~L~~ll~~~--d---~~  372 (434)
T d1q1sc_         303 RQDQIQQVVNHGLVPFLVGVLSK----ADFKTQKEAAWAITNYTSG-GTVEQIVYLVHCGIIEPLMNLLSAK--D---TK  372 (434)
T ss_dssp             CHHHHHHHHHTTCHHHHHHHHHS----SCHHHHHHHHHHHHHHHHH-SCHHHHHHHHHTTCHHHHHHHTTSS--C---HH
T ss_pred             cchhHHHHhhhhhHHHHHHHHhc----cChHHHHHHHHHHHHHHhc-CCHHHHHHHHHCCcHHHHHHHhcCC--C---HH
Confidence            554 4455567778888888865    3456799999999999854 4778899999999999998777543  3   23


Q ss_pred             HHHHHHHHHHHHhhh--chhhhHHHHHHHHhccChHHHHH
Q psy7103         289 EIVEMFVSVFCFLKD--SSEVSQILLKDFKEAHGYTFLKN  326 (467)
Q Consensus       289 e~ve~~~~v~~fLkd--S~~~S~~LlddF~~~~GY~fL~~  326 (467)
                      .+..++.++..+++-  ...-+......|+.++|...|.+
T Consensus       373 ~~~~~l~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~i~~  412 (434)
T d1q1sc_         373 IIQVILDAISNIFQAAEKLGETEKLSIMIEECGGLDKIEA  412 (434)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHTTSHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHcCCHHHHHH
Confidence            333333344444432  22345678888999999998765
>d1wa5b_ a.118.1.1 (B:) Karyopherin alpha {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1xqra1 a.118.1.21 (A:87-350) Hsp70-binding protein 1 (HspBP1) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1q1sc_ a.118.1.1 (C:) Importin alpha {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1wa5b_ a.118.1.1 (B:) Karyopherin alpha {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1xqra1 a.118.1.21 (A:87-350) Hsp70-binding protein 1 (HspBP1) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1jdha_ a.118.1.1 (A:) beta-Catenin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure