Psyllid ID: psy7246

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------18
Protein Sequence
MSSCMKEEAGREKFDDNKNSKVNSKKPVVEEKDKQSNNKKNVSKSYHNKHNRKRSQVMLGSKCHKRRRIDYSRRFIPPTKFLLGGNIHDPLNLNSLQDEEINRAMNAVTPKSSPLPTPQHRKGEIEVIIPPNICDPLNLAQCDDENTADYEAQFILPLKKMKRPKKKRKKSSCAMEET
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHccccccccccccccccccccEEEcccccccccccccccccccHHHHHHHHccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccEccccccccccccccccccccccEcccccccccccccccccccccccccccccccccccccccccccccccccccEEccccccccccccccccHHHHHHHcccccccccccccccccccEEEEEccccccccccccccccccHHHHHcccccccccccccccccccccccccc
Coil and Loop (DISEMBL)
msscmkeeagrekfddnknskvnskkpvveekdkqsnnkknvsksyhnkhnrkrsqvmlgskchkrrridysrrfipptkfllggnihdplnlnslqDEEINRAmnavtpkssplptpqhrkgeieviippnicdplnlaqcddentaDYEAQFILPlkkmkrpkkkrkksscameet
Flexible Loop (DISEMBL)
msscmkeeagrekfddnknskvnskkpvveekdkqsnnkknvsksyhnkhnrkrsqvmlgskchkrrridysrrfiPPTKFLLGGNIHDPLNLNSLQDEEINRAMNAvtpkssplptpqhRKGEIEVIIPPNICDPLNLAQCDDENTADYEAQfilplkkmkrpkkkrkksscameet
Low Complexity Region (SEG)
MSSCMKEEAGREKFDDnknskvnskkpvveekDkqsnnkknvsksyhnkhnRKRSQVMLGSKCHKRRRIDYSRRFIPPTKFLLGGNIHDPLNLNSLQDEEINRAMNAVTPKSSPLPTPQHRKGEIEVIIPPNICDPLNLAQCDDENTADYEAQFIlplkkmkrpkkkrkkSSCAMEET
Disordered region (IsUnstruct)
**************************************************************CHKRRRIDYSRRFIPPTKFLLGGNIHDPLNL*******************************IEVIIPPNICDPLNLAQCDDENTADYEAQFILP*********************
Disordered Region (DISOPRED)
*************************************************************************RFIPPTKFLLGGNIHDPLNLNSLQDEE************************IEVIIPPNICDPLNLAQCDD**********************************
Disordered Region (DISEMBL)
***************************************************************HKRRRIDYSRRFIPPTKFLLGGNIHDPLNLNSLQDEEINRAMNAVTP**********RKGEIEVIIPPNICDPLNLAQCDDENTADYEAQFILPLKK******************
Disordered Region (DISPRO)
************************************************************************RRFIPPTKFLLGGNIHDPLNLNSLQDEEINRAMNAVTPKSSPLPTPQHRKGEIEVIIPPNICDPLNLAQCDDENTADYEAQFI***********************
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MSSCMKEEAGREKFDDNKNSKVNSKKPVVEEKDKQSNNKKNVSKSYHNKHNRKRSQVMLGSKCHKRRRIDYSRRFIPPTKFLLGGNIHDPLNLNSLQDEEINRAMNAVTPKSSPLPTPQHRKGEIEVIIPPNICDPLNLAQCDDENTADYEAQFILPLKKMKRPKKKRKKSSCAMEET
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	178	2.2.26 [Sep-21-2011]
A3KQ55	645	7SK snRNA methylphosphate	no	N/A	0.921	0.254	0.393	3e-20
Q8K3A9	666	7SK snRNA methylphosphate	yes	N/A	0.443	0.118	0.555	2e-17
Q7K480	1367	Probable RNA methyltransf	yes	N/A	0.449	0.058	0.516	5e-17
Q7L2J0	689	7SK snRNA methylphosphate	yes	N/A	0.443	0.114	0.543	1e-16

>sp|A3KQ55|MEPCE_DANRE 7SK snRNA methylphosphate capping enzyme OS=Danio rerio GN=mepce PE=2 SV=2

 Score = 97.8 bits (242), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 70/178 (39%), Positives = 96/178 (53%), Gaps = 14/178 (7%)

Query: 1   MSSCMKEEAGREKFDDNKNSKVNSKKPVVEEKDKQSNNKKNVSKSYHNKHNRKRSQVMLG 60
           +S     EA  EK     N+  +    +  E  KQS+N    +K    K N++R+ +  G
Sbjct: 44  LSKDAGSEASLEKSATTDNNASSESAVLGAESSKQSHNG---TKPQQQKVNKRRNTMSAG 100

Query: 61  SK----CHKRRRIDYSRRFIPPTKFLLGGNIHDPLNLNSLQDEEINRAMNAVTPKSSPLP 116
            K      +RRR +     + PT FLLGGNI DPLNLNSL DEE+N+A+NA TPKSSPLP
Sbjct: 101 FKHPGYGKRRRRANSESESVLPTNFLLGGNIFDPLNLNSLLDEEVNKALNAETPKSSPLP 160

Query: 117 TPQHRKGEIEVIIPPNICDPLNLAQCDDENTADYEAQFILPLKKMKRPKKKRKKSSCA 174
                +  +E++IP +I DPLNL  C   +T D  +  + PLK     ++ R K   A
Sbjct: 161 A--KNRDPVEILIPRDITDPLNL-NC--LSTGD--SLLVSPLKSGGGRRRHRNKHHGA 211

S-adenosyl-L-methionine-dependent methyltransferase that adds a methylphosphate cap at the 5'-end of 7SK snRNA, leading to stabilize it.
Danio rerio (taxid: 7955)
EC: 2EC: .EC: 1EC: .EC: 1EC: .EC: -

>sp|Q8K3A9|MEPCE_MOUSE 7SK snRNA methylphosphate capping enzyme OS=Mus musculus GN=Mepce PE=1 SV=2

 Score = 88.2 bits (217), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 45/81 (55%), Positives = 59/81 (72%), Gaps = 2/81 (2%)

Query: 65  KRRRIDYSRRFIPPTKFLLGGNIHDPLNLNSLQDEEINRAMNAVTPKSSPLPTPQHRKGE 124
           +RRR++     + P+ FLLGGNI DPLNLNSL DEE++RA+NA TPKSSPLP     +  
Sbjct: 144 RRRRVNSDCDSVLPSNFLLGGNIFDPLNLNSLLDEEVSRALNAETPKSSPLPAKG--RDP 201

Query: 125 IEVIIPPNICDPLNLAQCDDE 145
           +E++IP +I DPL+L  C DE
Sbjct: 202 VEILIPKDITDPLSLNTCTDE 222

S-adenosyl-L-methionine-dependent methyltransferase that adds a methylphosphate cap at the 5'-end of 7SK snRNA, leading to stabilize it.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q7K480|BN3D1_DROME Probable RNA methyltransferase bin3 OS=Drosophila melanogaster GN=bin3 PE=1 SV=1

 Score = 87.0 bits (214), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 47/91 (51%), Positives = 61/91 (67%), Gaps = 11/91 (12%)

Query: 75  FIPPTKFLLGGNIHDPLNLNSLQDEEINRAMN-----AVTPKSSPLPTPQHRKGEIEVII 129
            +PPTKFLLGGNI DPLNLNSLQ+E  + A +     A TP+ SP+ TP     ++EVII
Sbjct: 305 IVPPTKFLLGGNISDPLNLNSLQNENTSNASSTNNTPATTPRQSPITTPP----KVEVII 360

Query: 130 PPNICDPLNLAQCDDENTADYEAQFILPLKK 160
           PPNI DPL+L   D  ++ +YE Q   P+K+
Sbjct: 361 PPNIHDPLHL--LDPVDSMEYEKQLTSPMKR 389

Probable methyltransferase.

Drosophila melanogaster (taxid: 7227)

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q7L2J0|MEPCE_HUMAN 7SK snRNA methylphosphate capping enzyme OS=Homo sapiens GN=MEPCE PE=1 SV=1

 Score = 85.9 bits (211), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 44/81 (54%), Positives = 58/81 (71%), Gaps = 2/81 (2%)

Query: 65  KRRRIDYSRRFIPPTKFLLGGNIHDPLNLNSLQDEEINRAMNAVTPKSSPLPTPQHRKGE 124
           +RRR++     + P+ FLLGGNI DPLNLNSL DEE++R +NA TPKSSPLP     +  
Sbjct: 169 RRRRVNSDCDSVLPSNFLLGGNIFDPLNLNSLLDEEVSRTLNAETPKSSPLPAKG--RDP 226

Query: 125 IEVIIPPNICDPLNLAQCDDE 145
           +E++IP +I DPL+L  C DE
Sbjct: 227 VEILIPKDITDPLSLNTCTDE 247

S-adenosyl-L-methionine-dependent methyltransferase that adds a methylphosphate cap at the 5'-end of 7SK snRNA, leading to stabilize it.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	178
345482180	668	PREDICTED: LOW QUALITY PROTEIN: probable	0.617	0.164	0.657	9e-33
322778830	677	hypothetical protein SINV_08584 [Solenop	0.752	0.197	0.547	4e-32
307184813	681	7SK snRNA methylphosphate capping enzyme	0.634	0.165	0.610	6e-32
332022338	724	7SK snRNA methylphosphate capping enzyme	0.825	0.203	0.517	1e-31
380016028	815	PREDICTED: uncharacterized protein LOC10	0.612	0.133	0.641	1e-31
328787304	206	PREDICTED: hypothetical protein LOC10057	0.612	0.529	0.641	2e-31
350414874	639	PREDICTED: probable methyltransferase bi	0.612	0.170	0.632	3e-31
340722014	639	PREDICTED: probable methyltransferase bi	0.612	0.170	0.632	3e-31
270013396	616	hypothetical protein TcasGA2_TC011992 [T	0.640	0.185	0.598	1e-30
189241018	621	PREDICTED: similar to conserved hypothet	0.640	0.183	0.598	1e-30

>gi|345482180|ref|XP_001605756.2| PREDICTED: LOW QUALITY PROTEIN: probable methyltransferase bin3-like [Nasonia vitripennis]

 Score =  145 bits (365), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 75/114 (65%), Positives = 83/114 (72%), Gaps = 4/114 (3%)

Query: 47  HNKHNRKRSQVMLGSK--CHKRRRIDYSRRFIPPTKFLLGGNIHDPLNLNSLQDEEINRA 104
           H K  RKR Q   G+   C   +R       IPPTKFLLGGNI DPLNLNS+QDEEINRA
Sbjct: 44  HFKFGRKRLQSFTGNGKFCPPYKRRKKEGAIIPPTKFLLGGNICDPLNLNSMQDEEINRA 103

Query: 105 MNAVTPKSSPLPTPQHRKGEIEVIIPPNICDPLNLAQCDDENTADYEAQFILPL 158
           MNAVTPKSSPLPTP+HRK  IEVIIPPNICDPLNL  C+D +  +YE Q I P+
Sbjct: 104 MNAVTPKSSPLPTPKHRKEAIEVIIPPNICDPLNLINCNDND--EYEKQLISPV 155

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|322778830|gb|EFZ09246.1| hypothetical protein SINV_08584 [Solenopsis invicta]

 Score =  142 bits (359), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 86/157 (54%), Positives = 100/157 (63%), Gaps = 23/157 (14%)

Query: 20  SKVNSKKPVVEEKDKQSNNKK-----NVSKSYHNKH---------NRKRSQVMLGSKCHK 65
           S V   +P  E ++ +  N+K     N+S   HNKH         NRKR Q    S  + 
Sbjct: 2   SSVQVDRPPKEGQNNKKENEKSRKVFNLSYKKHNKHDDNRYFKFSNRKRPQSSFCS--NG 59

Query: 66  RRRIDYSRR-----FIPPTKFLLGGNIHDPLNLNSLQDEEINRAMNAVTPKSSPLPTPQH 120
           +  + Y RR      IPPTKFLLGGNI DPLNLNS+QDEEINRAMNAVTPKSSPLPTP+H
Sbjct: 60  KSFLPYKRRKKEGVIIPPTKFLLGGNICDPLNLNSMQDEEINRAMNAVTPKSSPLPTPKH 119

Query: 121 RKGEIEVIIPPNICDPLNLAQCDDENTADYEAQFILP 157
           +K  IEVIIPPNICDPLNL  C+D    +YE Q I P
Sbjct: 120 KKEIIEVIIPPNICDPLNLTNCND--NEEYEKQLISP 154

Source: Solenopsis invicta

Species: Solenopsis invicta

Genus: Solenopsis

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307184813|gb|EFN71127.1| 7SK snRNA methylphosphate capping enzyme [Camponotus floridanus]

 Score =  142 bits (357), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 80/131 (61%), Positives = 89/131 (67%), Gaps = 18/131 (13%)

Query: 41  NVSKSYHNKH---------NRKRSQVMLGSKC-----HKRRRIDYSRRFIPPTKFLLGGN 86
           N+S   HNKH         NRKRSQ    S       +KRR+ +     IPPTKFLLGGN
Sbjct: 28  NLSHKKHNKHDDNRHFKFSNRKRSQSSFSSNGKFFPPYKRRKKEGV--IIPPTKFLLGGN 85

Query: 87  IHDPLNLNSLQDEEINRAMNAVTPKSSPLPTPQHRKGEIEVIIPPNICDPLNLAQCDDEN 146
           I DPLNLNS+QDEEINR MNAVTPKSSPLPTP+H+K  IEVIIPPNICDPLNL  C+D  
Sbjct: 86  ICDPLNLNSMQDEEINRVMNAVTPKSSPLPTPKHKKEIIEVIIPPNICDPLNLTNCND-- 143

Query: 147 TADYEAQFILP 157
             +YE Q I P
Sbjct: 144 NEEYEKQLISP 154

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332022338|gb|EGI62650.1| 7SK snRNA methylphosphate capping enzyme [Acromyrmex echinatior]

 Score =  141 bits (355), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 89/172 (51%), Positives = 105/172 (61%), Gaps = 25/172 (14%)

Query: 5   MKEEAGREKFDDNKNSKVNSKKPVVEEKDKQSNNKK----NVSKSYHNKHN--------- 51
           + E  G  +F    + +V+ + P V + +K+   K     NVS   HNKH+         
Sbjct: 32  VSESVGLSRFSKMSSVQVD-RPPKVSQNNKKETEKFRKIFNVSHKKHNKHDDSRYFKQLH 90

Query: 52  RKRSQVMLGSKCHKRRRID-YSRR-----FIPPTKFLLGGNIHDPLNLNSLQDEEINRAM 105
           RKR Q    S C   +    Y RR      IPPTKFLLGGNI DPLNLNS+QDEEINRAM
Sbjct: 91  RKRPQ---SSFCSNGKSFPPYKRRKKEGVIIPPTKFLLGGNICDPLNLNSMQDEEINRAM 147

Query: 106 NAVTPKSSPLPTPQHRKGEIEVIIPPNICDPLNLAQCDDENTADYEAQFILP 157
           NAVTPKSSPLPTP+H+K  IEVIIPPNICDPLNL  C+D    +YE Q I P
Sbjct: 148 NAVTPKSSPLPTPKHKKEIIEVIIPPNICDPLNLTNCND--NEEYEKQLISP 197

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380016028|ref|XP_003691995.1| PREDICTED: uncharacterized protein LOC100870180 [Apis florea]

 Score =  140 bits (354), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 75/117 (64%), Positives = 87/117 (74%), Gaps = 8/117 (6%)

Query: 45  SYHNKHNRKRSQVMLGSK----CHKRRRIDYSRRFIPPTKFLLGGNIHDPLNLNSLQDEE 100
           S H K  RKR Q    +      +KRR+ + +   IPPTKFLLGGNI DPLNLNS+QDEE
Sbjct: 39  SRHFKFGRKRLQSFTSNGKFFPPYKRRKKEGA--IIPPTKFLLGGNICDPLNLNSMQDEE 96

Query: 101 INRAMNAVTPKSSPLPTPQHRKGEIEVIIPPNICDPLNLAQCDDENTADYEAQFILP 157
           INRAMNAVTPKSSPLPTP+H+K  IEVIIPPNICDPLNL+ C+D +  +YE Q I P
Sbjct: 97  INRAMNAVTPKSSPLPTPKHKKEVIEVIIPPNICDPLNLSNCNDND--EYEKQLISP 151

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328787304|ref|XP_003250922.1| PREDICTED: hypothetical protein LOC100578950 [Apis mellifera]

 Score =  140 bits (353), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 75/117 (64%), Positives = 87/117 (74%), Gaps = 8/117 (6%)

Query: 45  SYHNKHNRKRSQVMLGSK----CHKRRRIDYSRRFIPPTKFLLGGNIHDPLNLNSLQDEE 100
           S H K  RKR Q    +      +KRR+ + +   IPPTKFLLGGNI DPLNLNS+QDEE
Sbjct: 39  SRHFKFGRKRLQSFTSNGKFFPPYKRRKKEGA--IIPPTKFLLGGNICDPLNLNSMQDEE 96

Query: 101 INRAMNAVTPKSSPLPTPQHRKGEIEVIIPPNICDPLNLAQCDDENTADYEAQFILP 157
           INRAMNAVTPKSSPLPTP+H+K  IEVIIPPNICDPLNL+ C+D +  +YE Q I P
Sbjct: 97  INRAMNAVTPKSSPLPTPKHKKEVIEVIIPPNICDPLNLSNCNDND--EYEKQLISP 151

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350414874|ref|XP_003490452.1| PREDICTED: probable methyltransferase bin3-like [Bombus impatiens]

 Score =  140 bits (352), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 74/117 (63%), Positives = 86/117 (73%), Gaps = 8/117 (6%)

Query: 45  SYHNKHNRKRSQVMLGSK----CHKRRRIDYSRRFIPPTKFLLGGNIHDPLNLNSLQDEE 100
           S H K  RKR Q  + +      +KRR+ + +   IPPTKFLLGGNI DPLNLNS+QDEE
Sbjct: 39  SRHFKFGRKRLQSFISNGKFFPPYKRRKKEGA--IIPPTKFLLGGNIRDPLNLNSMQDEE 96

Query: 101 INRAMNAVTPKSSPLPTPQHRKGEIEVIIPPNICDPLNLAQCDDENTADYEAQFILP 157
           INRAMNAVTPKSSPLPTP+H+   IEVIIPPNICDPLNL+ C+D    +YE Q I P
Sbjct: 97  INRAMNAVTPKSSPLPTPRHKTEVIEVIIPPNICDPLNLSNCND--NEEYEKQLISP 151

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340722014|ref|XP_003399407.1| PREDICTED: probable methyltransferase bin3-like [Bombus terrestris]

 Score =  140 bits (352), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 74/117 (63%), Positives = 86/117 (73%), Gaps = 8/117 (6%)

Query: 45  SYHNKHNRKRSQVMLGSK----CHKRRRIDYSRRFIPPTKFLLGGNIHDPLNLNSLQDEE 100
           S H K  RKR Q  + +      +KRR+ + +   IPPTKFLLGGNI DPLNLNS+QDEE
Sbjct: 39  SRHFKFGRKRLQSFISNGKFFPPYKRRKKEGA--IIPPTKFLLGGNIRDPLNLNSMQDEE 96

Query: 101 INRAMNAVTPKSSPLPTPQHRKGEIEVIIPPNICDPLNLAQCDDENTADYEAQFILP 157
           INRAMNAVTPKSSPLPTP+H+   IEVIIPPNICDPLNL+ C+D    +YE Q I P
Sbjct: 97  INRAMNAVTPKSSPLPTPRHKTEVIEVIIPPNICDPLNLSNCND--NEEYEKQLISP 151

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|270013396|gb|EFA09844.1| hypothetical protein TcasGA2_TC011992 [Tribolium castaneum]

 Score =  137 bits (346), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 73/122 (59%), Positives = 88/122 (72%), Gaps = 8/122 (6%)

Query: 37  NNKKNVSKSYHNKHNRKRSQVMLGSKCHKRRRIDYSRRFIPPTKFLLGGNIHDPLNLNSL 96
           NN  +  KS H++  RKRS+   G  C     +    + +PPTKFLLGGNI+DPLNLNSL
Sbjct: 23  NNTNSKRKSKHDRSGRKRSKSFSG--CG----LMMDMKPVPPTKFLLGGNINDPLNLNSL 76

Query: 97  QDEEINRAMNAVTPKSSPLPTPQHRKGEIEVIIPPNICDPLNLAQCDDENTADYEAQFIL 156
           QDE+INRAMNA+TPKSSP+PTP  RKG+IEVIIPPNI DPLNL  C D+  A+YE Q   
Sbjct: 77  QDEDINRAMNAITPKSSPIPTPPRRKGQIEVIIPPNINDPLNLIGCADD--AEYEQQLYS 134

Query: 157 PL 158
           P+
Sbjct: 135 PV 136

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|189241018|ref|XP_969281.2| PREDICTED: similar to conserved hypothetical protein [Tribolium castaneum]

 Score =  137 bits (346), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 73/122 (59%), Positives = 88/122 (72%), Gaps = 8/122 (6%)

Query: 37  NNKKNVSKSYHNKHNRKRSQVMLGSKCHKRRRIDYSRRFIPPTKFLLGGNIHDPLNLNSL 96
           NN  +  KS H++  RKRS+   G  C     +    + +PPTKFLLGGNI+DPLNLNSL
Sbjct: 23  NNTNSKRKSKHDRSGRKRSKSFSG--CG----LMMDMKPVPPTKFLLGGNINDPLNLNSL 76

Query: 97  QDEEINRAMNAVTPKSSPLPTPQHRKGEIEVIIPPNICDPLNLAQCDDENTADYEAQFIL 156
           QDE+INRAMNA+TPKSSP+PTP  RKG+IEVIIPPNI DPLNL  C D+  A+YE Q   
Sbjct: 77  QDEDINRAMNAITPKSSPIPTPPRRKGQIEVIIPPNINDPLNLIGCADD--AEYEQQLYS 134

Query: 157 PL 158
           P+
Sbjct: 135 PV 136

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	178
UNIPROTKB|G3V656	660	Mepce "Protein Mepce" [Rattus	0.443	0.119	0.555	6.9e-18
MGI|MGI:106477	666	Mepce "methylphosphate capping	0.443	0.118	0.555	7e-18
UNIPROTKB|F1RNM4	670	LOC100513274 "Uncharacterized	0.443	0.117	0.555	7.1e-18
UNIPROTKB|F1RMY9	690	LOC100513274 "Uncharacterized	0.443	0.114	0.555	7.5e-18
UNIPROTKB|E2RGJ1	692	MEPCE "Uncharacterized protein	0.443	0.114	0.555	7.5e-18
ZFIN|ZDB-GENE-030131-3936	645	mepce "methylphosphate capping	0.410	0.113	0.586	1.8e-17
UNIPROTKB|Q7L2J0	689	MEPCE "7SK snRNA methylphospha	0.443	0.114	0.543	2e-17
ZFIN|ZDB-GENE-110411-13	629	si:ch1073-157b13.1 "si:ch1073-	0.415	0.117	0.565	1.2e-16
FB|FBgn0263144	1367	bin3 "bicoid-interacting prote	0.404	0.052	0.542	1.2e-14

UNIPROTKB|G3V656 Mepce "Protein Mepce" [Rattus norvegicus (taxid:10116)]

 Score = 227 (85.0 bits), Expect = 6.9e-18, P = 6.9e-18
 Identities = 45/81 (55%), Positives = 59/81 (72%)

Query:    65 KRRRIDYSRRFIPPTKFLLGGNIHDPLNLNSLQDEEINRAMNAVTPKSSPLPTPQHRKGE 124
             +RRR++     + P+ FLLGGNI DPLNLNSL DEE++RA+NA TPKSSPLP     +  
Sbjct:   144 RRRRVNSDCDSVLPSNFLLGGNIFDPLNLNSLLDEEVSRALNAETPKSSPLPAKG--RDP 201

Query:   125 IEVIIPPNICDPLNLAQCDDE 145
             +E++IP +I DPL+L  C DE
Sbjct:   202 VEILIPKDITDPLSLNTCTDE 222

GO:0008168 "methyltransferase activity" evidence=IEA

MGI|MGI:106477 Mepce "methylphosphate capping enzyme" [Mus musculus (taxid:10090)]

 Score = 227 (85.0 bits), Expect = 7.0e-18, P = 7.0e-18
 Identities = 45/81 (55%), Positives = 59/81 (72%)

Query:    65 KRRRIDYSRRFIPPTKFLLGGNIHDPLNLNSLQDEEINRAMNAVTPKSSPLPTPQHRKGE 124
             +RRR++     + P+ FLLGGNI DPLNLNSL DEE++RA+NA TPKSSPLP     +  
Sbjct:   144 RRRRVNSDCDSVLPSNFLLGGNIFDPLNLNSLLDEEVSRALNAETPKSSPLPAKG--RDP 201

Query:   125 IEVIIPPNICDPLNLAQCDDE 145
             +E++IP +I DPL+L  C DE
Sbjct:   202 VEILIPKDITDPLSLNTCTDE 222

GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=IGI

GO:0001510 "RNA methylation" evidence=ISO

GO:0005575 "cellular_component" evidence=ND

GO:0008168 "methyltransferase activity" evidence=IEA

GO:0008173 "RNA methyltransferase activity" evidence=ISO

GO:0008757 "S-adenosylmethionine-dependent methyltransferase activity" evidence=ISO

GO:0016073 "snRNA metabolic process" evidence=ISO

GO:0016740 "transferase activity" evidence=IEA

GO:0032259 "methylation" evidence=IEA

GO:0035562 "negative regulation of chromatin binding" evidence=IGI

GO:0040031 "snRNA modification" evidence=ISO

GO:1900087 "positive regulation of G1/S transition of mitotic cell cycle" evidence=IMP

UNIPROTKB|F1RNM4 LOC100513274 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 227 (85.0 bits), Expect = 7.1e-18, P = 7.1e-18
 Identities = 45/81 (55%), Positives = 59/81 (72%)

Query:    65 KRRRIDYSRRFIPPTKFLLGGNIHDPLNLNSLQDEEINRAMNAVTPKSSPLPTPQHRKGE 124
             +RRR++     + P+ FLLGGNI DPLNLNSL DEE++RA+NA TPKSSPLP     +  
Sbjct:   148 RRRRVNSDCDSVLPSNFLLGGNIFDPLNLNSLLDEEVSRALNAETPKSSPLPAKG--RDP 205

Query:   125 IEVIIPPNICDPLNLAQCDDE 145
             +E++IP +I DPL+L  C DE
Sbjct:   206 VEILIPKDITDPLSLNTCTDE 226

GO:0008168 "methyltransferase activity" evidence=IEA

UNIPROTKB|F1RMY9 LOC100513274 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 227 (85.0 bits), Expect = 7.5e-18, P = 7.5e-18
 Identities = 45/81 (55%), Positives = 59/81 (72%)

Query:    65 KRRRIDYSRRFIPPTKFLLGGNIHDPLNLNSLQDEEINRAMNAVTPKSSPLPTPQHRKGE 124
             +RRR++     + P+ FLLGGNI DPLNLNSL DEE++RA+NA TPKSSPLP     +  
Sbjct:   168 RRRRVNSDCDSVLPSNFLLGGNIFDPLNLNSLLDEEVSRALNAETPKSSPLPAKG--RDP 225

Query:   125 IEVIIPPNICDPLNLAQCDDE 145
             +E++IP +I DPL+L  C DE
Sbjct:   226 VEILIPKDITDPLSLNTCTDE 246

GO:0008168 "methyltransferase activity" evidence=IEA

UNIPROTKB|E2RGJ1 MEPCE "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 227 (85.0 bits), Expect = 7.5e-18, P = 7.5e-18
 Identities = 45/81 (55%), Positives = 59/81 (72%)

Query:    65 KRRRIDYSRRFIPPTKFLLGGNIHDPLNLNSLQDEEINRAMNAVTPKSSPLPTPQHRKGE 124
             +RRR++     + P+ FLLGGNI DPLNLNSL DEE++RA+NA TPKSSPLP     +  
Sbjct:   167 RRRRVNSDCDSVLPSNFLLGGNIFDPLNLNSLLDEEVSRALNAETPKSSPLPAKG--RDP 224

Query:   125 IEVIIPPNICDPLNLAQCDDE 145
             +E++IP +I DPL+L  C DE
Sbjct:   225 VEILIPKDITDPLSLNTCTDE 245

GO:0040031 "snRNA modification" evidence=IEA

GO:0008757 "S-adenosylmethionine-dependent methyltransferase activity" evidence=IEA

GO:0008173 "RNA methyltransferase activity" evidence=IEA

ZFIN|ZDB-GENE-030131-3936 mepce "methylphosphate capping enzyme" [Danio rerio (taxid:7955)]

 Score = 223 (83.6 bits), Expect = 1.8e-17, P = 1.8e-17
 Identities = 44/75 (58%), Positives = 55/75 (73%)

Query:    65 KRRRIDYSRRFIPPTKFLLGGNIHDPLNLNSLQDEEINRAMNAVTPKSSPLPTPQHRKGE 124
             +RRR +     + PT FLLGGNI DPLNLNSL DEE+N+A+NA TPKSSPLP     +  
Sbjct:   109 RRRRANSESESVLPTNFLLGGNIFDPLNLNSLLDEEVNKALNAETPKSSPLPAKN--RDP 166

Query:   125 IEVIIPPNICDPLNL 139
             +E++IP +I DPLNL
Sbjct:   167 VEILIPRDITDPLNL 181

GO:0008168 "methyltransferase activity" evidence=IEA

GO:0001510 "RNA methylation" evidence=ISS

GO:0008757 "S-adenosylmethionine-dependent methyltransferase activity" evidence=ISS

GO:0008173 "RNA methyltransferase activity" evidence=ISS

GO:0016073 "snRNA metabolic process" evidence=ISS

GO:0040031 "snRNA modification" evidence=ISS

GO:0016740 "transferase activity" evidence=IEA

GO:0032259 "methylation" evidence=IEA

UNIPROTKB|Q7L2J0 MEPCE "7SK snRNA methylphosphate capping enzyme" [Homo sapiens (taxid:9606)]

 Score = 223 (83.6 bits), Expect = 2.0e-17, P = 2.0e-17
 Identities = 44/81 (54%), Positives = 58/81 (71%)

Query:    65 KRRRIDYSRRFIPPTKFLLGGNIHDPLNLNSLQDEEINRAMNAVTPKSSPLPTPQHRKGE 124
             +RRR++     + P+ FLLGGNI DPLNLNSL DEE++R +NA TPKSSPLP     +  
Sbjct:   169 RRRRVNSDCDSVLPSNFLLGGNIFDPLNLNSLLDEEVSRTLNAETPKSSPLPAKG--RDP 226

Query:   125 IEVIIPPNICDPLNLAQCDDE 145
             +E++IP +I DPL+L  C DE
Sbjct:   227 VEILIPKDITDPLSLNTCTDE 247

GO:0008173 "RNA methyltransferase activity" evidence=IDA

GO:0040031 "snRNA modification" evidence=IDA

GO:0016073 "snRNA metabolic process" evidence=IDA

GO:0001510 "RNA methylation" evidence=IDA

GO:0008757 "S-adenosylmethionine-dependent methyltransferase activity" evidence=IDA

ZFIN|ZDB-GENE-110411-13 si:ch1073-157b13.1 "si:ch1073-157b13.1" [Danio rerio (taxid:7955)]

 Score = 215 (80.7 bits), Expect = 1.2e-16, P = 1.2e-16
 Identities = 43/76 (56%), Positives = 57/76 (75%)

Query:    65 KRRRIDYSRRFIPPTKFLLGGNIHDPLNLNSLQDEEINRAMNAVTPKSSPLPTPQHRKGE 124
             +RRR +     + PT FLLGGNI DPLNLNSL DEE+++A+NA TPKSSPLP+    +  
Sbjct:    98 RRRRANSECDPVLPTNFLLGGNIFDPLNLNSLLDEEVSKALNAETPKSSPLPSKN--RDP 155

Query:   125 IEVIIPPNICDPLNLA 140
             +E++IP +I DPLNL+
Sbjct:   156 VEILIPKDITDPLNLS 171

GO:0008168 "methyltransferase activity" evidence=IEA

FB|FBgn0263144 bin3 "bicoid-interacting protein 3" [Drosophila melanogaster (taxid:7227)]

 Score = 201 (75.8 bits), Expect = 1.2e-14, P = 1.2e-14
 Identities = 45/83 (54%), Positives = 57/83 (68%)

Query:    76 IPPTKFLLGGNIHDPLNLNSLQDEEINRAMN-----AVTPKSSPLPTPQHRKGEIEVIIP 130
             +PPTKFLLGGNI DPLNLNSLQ+E  + A +     A TP+ SP+ TP     ++EVIIP
Sbjct:   306 VPPTKFLLGGNISDPLNLNSLQNENTSNASSTNNTPATTPRQSPITTPP----KVEVIIP 361

Query:   131 PNICDPLNLAQCDDENTADYEAQ 153
             PNI DPL+L   D  ++ +YE Q
Sbjct:   362 PNIHDPLHLL--DPVDSMEYEKQ 382


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.316   0.133   0.397    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      178       129   0.00091  102 3  11 22  0.42    31
                                                     29  0.41    33


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  9
  No. of states in DFA:  549 (58 KB)
  Total size of DFA:  127 KB (2082 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  14.09u 0.10s 14.19t   Elapsed:  00:00:05
  Total cpu time:  14.09u 0.10s 14.19t   Elapsed:  00:00:05
  Start:  Thu Aug 15 11:51:20 2013   End:  Thu Aug 15 11:51:25 2013

GO:0001085 "RNA polymerase II transcription factor binding" evidence=IPI

GO:0008168 "methyltransferase activity" evidence=ISS

GO:0032259 "methylation" evidence=ISS

GO:0005575 "cellular_component" evidence=ND

GO:0042048 "olfactory behavior" evidence=IMP

GO:0017148 "negative regulation of translation" evidence=IMP

GO:0017069 "snRNA binding" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q7L2J0	MEPCE_HUMAN	2, ., 1, ., 1, ., -	0.5432	0.4438	0.1146	yes	N/A
Q8K3A9	MEPCE_MOUSE	2, ., 1, ., 1, ., -	0.5555	0.4438	0.1186	yes	N/A
Q7K480	BN3D1_DROME	2, ., 1, ., 1, ., -	0.5164	0.4494	0.0585	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

No hit with probability above 80.00

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00