Psyllid ID: psy8106


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190------
MGLEFNLLIYTPILLLCLWVQPSDNKVNYTTNCETLRLGQYICPDPDPKYEYIDRKTQQPKNCTKENLARVRCIAADNIICLETGNSTFYKDMRCRWTNGYSFETAMLLSIFLGMFGADRFYLGYPALGLLKFCTLGFMLIGYLVDIILIATQIVGPADGSYYIIPYYGAGITIVRSDNETYRVPQDDWYQHHNEL
cccHHHHHHHHHHHHHccccccccccccccEEcccccccEEEcccccccccccccccccccccccccEEEEEEEEcccEEEccccccEEEccccccccccccHHHHHHHHHHHccccccEEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccEEEEEEcccEEEEEEEcccEEEEccccHHHHcccc
cccEEEEEEEcEEEEEEEEccccccccccEEEccccccccEEccccccccccccccccccccccccccEEEEEEEcccEEEEEccccEEccccccccccccEHHHHHHHHHHHHHccccHEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccEEEEcccccEEEEEEccccEEcccccHHHccccc
mglefnllIYTPILLLCLwvqpsdnkvnyttncetlrlgqyicpdpdpkyeyidrktqqpknctkenlARVRCIAADniicletgnstfykdmrcrwtngySFETAMLLSIFLGMfgadrfylgypalgllkFCTLGFMLIGYLVDIILIATqivgpadgsyyiipyygagitivrsdnetyrvpqddwyqhhnel
MGLEFNLLIYTPILLLCLWVQPSDNKVNYTtncetlrlgqyicpdpDPKYEYidrktqqpknctkenLARVRCIAADniicletgnstfykdmRCRWTNGYSFETAMLLSIFLGMFGADRFYLGYPALGLLKFCTLGFMLIGYLVDIILIATQIVGPADGSYYIIPYYGAGITIVRSDNETYRVPQDDWYQHHNEL
MGLEFNlliytpilllclWVQPSDNKVNYTTNCETLRLGQYICPDPDPKYEYIDRKTQQPKNCTKENLARVRCIAADNIICLETGNSTFYKDMRCRWTNGYSFETAMLLSIFLGMFGADRFYLGYPALGLLKFCTLGFMLIGYLVDIILIATQIVGPADGSYYIIPYYGAGITIVRSDNETYRVPQDDWYQHHNEL
***EFNLLIYTPILLLCLWVQPSDNKVNYTTNCETLRLGQYICPDPDPKYEYIDRKT***KNCTKENLARVRCIAADNIICLETGNSTFYKDMRCRWTNGYSFETAMLLSIFLGMFGADRFYLGYPALGLLKFCTLGFMLIGYLVDIILIATQIVGPADGSYYIIPYYGAGITIVRSDNETYRVPQDDWY******
***EFNLLIYTPILLLCLWVQPSDNKVNYTTNCETLRLGQYICPDPDPKYEYIDRKTQQPKNCTKENLARVRCIAADNIICLETGNSTFYKDMRCRWTNGYSFETAMLLSIFLGMFGADRFYLGYPALGLLKFCTLGFMLIGYLVDIILIATQIVGPADGSYYIIPYYGAGITIVRSDNETYRVPQDD********
MGLEFNLLIYTPILLLCLWVQPSDNKVNYTTNCETLRLGQYICPDPDPKYEYIDRKTQQPKNCTKENLARVRCIAADNIICLETGNSTFYKDMRCRWTNGYSFETAMLLSIFLGMFGADRFYLGYPALGLLKFCTLGFMLIGYLVDIILIATQIVGPADGSYYIIPYYGAGITIVRSDNETYRVPQDDWYQHHNEL
*GLEFNLLIYTPILLLCLWVQPSDNKVNYTTNCETLRLGQYICPDPDPKYEYIDRKTQQPKNCTKENLARVRCIAADNIICLETGNSTFYKDMRCRWTNGYSFETAMLLSIFLGMFGADRFYLGYPALGLLKFCTLGFMLIGYLVDIILIATQIVGPADGSYYIIPYYGAGITIVRSDNETYRVPQDDWYQH****
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MGLEFNLLIYTPILLLCLWVQPSDNKVNYTTNCETLRLGQYICPDPDPKYEYIDRKTQQPKNCTKENLARVRCIAADNIICLETGNSTFYKDMRCRWTNGYSFETAMLLSIFLGMFGADRFYLGYPALGLLKFCTLGFMLIGYLVDIILIATQIVGPADGSYYIIPYYGAGITIVRSDNETYRVPQDDWYQHHNEL
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query196 2.2.26 [Sep-21-2011]
Q9W2H1178 TM2 domain-containing pro yes N/A 0.826 0.910 0.630 1e-56
Q9BX74207 TM2 domain-containing pro yes N/A 0.760 0.719 0.542 6e-40
Q99MB3208 TM2 domain-containing pro yes N/A 0.770 0.725 0.536 4e-39
A5PLH4197 TM2 domain-containing pro yes N/A 0.780 0.776 0.505 2e-37
Q95PJ8179 TM2 domain-containing pro yes N/A 0.785 0.860 0.395 8e-25
Q9U4H5284 TM2 domain-containing pro no N/A 0.515 0.355 0.427 3e-19
Q9BRN9247 TM2 domain-containing pro no N/A 0.591 0.469 0.436 4e-18
Q8BJ83261 TM2 domain-containing pro no N/A 0.591 0.444 0.453 4e-18
Q6DE06247 TM2 domain-containing pro N/A N/A 0.617 0.489 0.402 2e-17
Q07FZ2247 TM2 domain-containing pro yes N/A 0.617 0.489 0.402 5e-17
>sp|Q9W2H1|TM2D1_DROME TM2 domain-containing protein CG10795 OS=Drosophila melanogaster GN=CG10795 PE=2 SV=1 Back     alignment and function desciption
 Score =  219 bits (557), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 104/165 (63%), Positives = 128/165 (77%), Gaps = 3/165 (1%)

Query: 25  NKVNYTTNCETLRLGQYICPDPDPKYEYIDRKTQQPKNCTKENLARVRCIAADNIICLET 84
           +++N   N E   +GQ++CPDP      ID KTQQ   CT+E  ARV CIAA+ I C ET
Sbjct: 17  HQINVDCN-ELQMMGQFMCPDP--ARGQIDPKTQQLAGCTREGRARVWCIAANEINCTET 73

Query: 85  GNSTFYKDMRCRWTNGYSFETAMLLSIFLGMFGADRFYLGYPALGLLKFCTLGFMLIGYL 144
           GN+TF +++ C+WTNGY  +T +LLS+FLGMFG DRFYLGYP +GLLKFCTLG M +G L
Sbjct: 74  GNATFTREVPCKWTNGYHLDTTLLLSVFLGMFGVDRFYLGYPGIGLLKFCTLGGMFLGQL 133

Query: 145 VDIILIATQIVGPADGSYYIIPYYGAGITIVRSDNETYRVPQDDW 189
           +DI+LIA Q+VGPADGS Y+IPYYGAGI IVRSDN TYR+P+DDW
Sbjct: 134 IDIVLIALQVVGPADGSAYVIPYYGAGIHIVRSDNTTYRLPRDDW 178





Drosophila melanogaster (taxid: 7227)
>sp|Q9BX74|TM2D1_HUMAN TM2 domain-containing protein 1 OS=Homo sapiens GN=TM2D1 PE=1 SV=1 Back     alignment and function description
>sp|Q99MB3|TM2D1_MOUSE TM2 domain-containing protein 1 OS=Mus musculus GN=Tm2d1 PE=2 SV=1 Back     alignment and function description
>sp|A5PLH4|TM2D1_DANRE TM2 domain-containing protein 1 OS=Danio rerio GN=tm2d1 PE=2 SV=1 Back     alignment and function description
>sp|Q95PJ8|TM2D3_CAEEL TM2 domain-containing protein Y66D12A.21 OS=Caenorhabditis elegans GN=Y66D12A.21 PE=3 SV=2 Back     alignment and function description
>sp|Q9U4H5|AMX_DROME TM2 domain-containing protein almondex OS=Drosophila melanogaster GN=amx PE=2 SV=1 Back     alignment and function description
>sp|Q9BRN9|TM2D3_HUMAN TM2 domain-containing protein 3 OS=Homo sapiens GN=TM2D3 PE=2 SV=2 Back     alignment and function description
>sp|Q8BJ83|TM2D3_MOUSE TM2 domain-containing protein 3 OS=Mus musculus GN=Tm2d3 PE=2 SV=1 Back     alignment and function description
>sp|Q6DE06|TM2D3_XENLA TM2 domain-containing protein 3 OS=Xenopus laevis GN=tm2d3 PE=2 SV=1 Back     alignment and function description
>sp|Q07FZ2|TM2D3_XENTR TM2 domain-containing protein 3 OS=Xenopus tropicalis GN=tm2d3 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query196
242247445195 TM2 domain-containing protein 1-like pre 0.989 0.994 0.619 8e-65
312379841 634 hypothetical protein AND_08196 [Anophele 0.795 0.246 0.702 2e-64
156554152185 PREDICTED: TM2 domain-containing protein 0.887 0.940 0.679 3e-64
322794990 1080 hypothetical protein SINV_00965 [Solenop 0.877 0.159 0.633 8e-64
91087331183 PREDICTED: similar to CG10795 CG10795-PA 0.882 0.945 0.670 3e-63
380028128186 PREDICTED: TM2 domain-containing protein 0.826 0.870 0.710 1e-62
157131258184 hypothetical protein AaeL_AAEL012051 [Ae 0.795 0.847 0.696 8e-62
307213319186 TM2 domain-containing protein CG10795 [H 0.806 0.849 0.7 1e-61
332020850 1152 TM2 domain-containing protein [Acromyrme 0.734 0.125 0.719 6e-61
170058644183 TM2 domain containing 1 [Culex quinquefa 0.897 0.961 0.625 6e-61
>gi|242247445|ref|NP_001156239.1| TM2 domain-containing protein 1-like precursor [Acyrthosiphon pisum] gi|239789943|dbj|BAH71565.1| ACYPI007262 [Acyrthosiphon pisum] Back     alignment and taxonomy information
 Score =  251 bits (642), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 122/197 (61%), Positives = 149/197 (75%), Gaps = 3/197 (1%)

Query: 1   MGLEFNLLIYTPILLLCLWVQPSDNKVN-YTTNCETLRLGQYICPDPDPKYEYIDRKTQQ 59
           M L + +LI   +       QPS  K   Y T C+ LR+GQ++CPD    YE+ID +TQQ
Sbjct: 1   MNLAWLILIAVLLTSCVHLAQPSMGKTTIYETECKHLRMGQFMCPDD--GYEFIDPETQQ 58

Query: 60  PKNCTKENLARVRCIAADNIICLETGNSTFYKDMRCRWTNGYSFETAMLLSIFLGMFGAD 119
            + CTK+N+A+VRC A+D I+CLET NSTF+K+  C+WTNGY ++T +LLSIFLGMFG D
Sbjct: 59  LRGCTKDNVAQVRCKASDGIVCLETKNSTFWKEFPCKWTNGYHYDTTLLLSIFLGMFGVD 118

Query: 120 RFYLGYPALGLLKFCTLGFMLIGYLVDIILIATQIVGPADGSYYIIPYYGAGITIVRSDN 179
           RFYLGYPA+GLLK CTLGFM IG LVD++LIATQIV PADGS+YIIPYYG GI  +  DN
Sbjct: 119 RFYLGYPAIGLLKLCTLGFMFIGQLVDVVLIATQIVRPADGSHYIIPYYGPGINFILMDN 178

Query: 180 ETYRVPQDDWYQHHNEL 196
           ETYR PQDDW+  HNEL
Sbjct: 179 ETYRQPQDDWFVDHNEL 195




Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|312379841|gb|EFR26001.1| hypothetical protein AND_08196 [Anopheles darlingi] Back     alignment and taxonomy information
>gi|156554152|ref|XP_001599414.1| PREDICTED: TM2 domain-containing protein CG10795-like [Nasonia vitripennis] Back     alignment and taxonomy information
>gi|322794990|gb|EFZ17846.1| hypothetical protein SINV_00965 [Solenopsis invicta] Back     alignment and taxonomy information
>gi|91087331|ref|XP_975597.1| PREDICTED: similar to CG10795 CG10795-PA [Tribolium castaneum] Back     alignment and taxonomy information
>gi|380028128|ref|XP_003697761.1| PREDICTED: TM2 domain-containing protein CG10795-like [Apis florea] Back     alignment and taxonomy information
>gi|157131258|ref|XP_001655841.1| hypothetical protein AaeL_AAEL012051 [Aedes aegypti] gi|108871589|gb|EAT35814.1| AAEL012051-PA [Aedes aegypti] Back     alignment and taxonomy information
>gi|307213319|gb|EFN88771.1| TM2 domain-containing protein CG10795 [Harpegnathos saltator] Back     alignment and taxonomy information
>gi|332020850|gb|EGI61248.1| TM2 domain-containing protein [Acromyrmex echinatior] Back     alignment and taxonomy information
>gi|170058644|ref|XP_001865009.1| TM2 domain containing 1 [Culex quinquefasciatus] gi|167877685|gb|EDS41068.1| TM2 domain containing 1 [Culex quinquefasciatus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query196
FB|FBgn0034626178 CG10795 [Drosophila melanogast 0.826 0.910 0.630 4.8e-55
UNIPROTKB|J3KPA2269 TM2D1 "TM2 domain containing 1 0.755 0.550 0.546 2.3e-39
UNIPROTKB|Q9BX74207 TM2D1 "TM2 domain-containing p 0.755 0.714 0.546 2.3e-39
UNIPROTKB|Q2KI73205 TM2D1 "Uncharacterized protein 0.770 0.736 0.542 2.9e-39
MGI|MGI:2137022208 Tm2d1 "TM2 domain containing 1 0.770 0.725 0.536 7.8e-39
UNIPROTKB|F1NDW3178 TM2D1 "Uncharacterized protein 0.770 0.848 0.546 1.6e-38
ZFIN|ZDB-GENE-050208-580198 tm2d1 "TM2 domain containing 1 0.765 0.757 0.518 2.1e-36
WB|WBGene00013446179 Y66D12A.21 [Caenorhabditis ele 0.75 0.821 0.412 1.8e-25
RGD|1305442139 Tm2d1 "TM2 domain containing 1 0.316 0.446 0.596 4.1e-21
FB|FBgn0000077284 amx "almondex" [Drosophila mel 0.515 0.355 0.427 5.7e-20
FB|FBgn0034626 CG10795 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 568 (205.0 bits), Expect = 4.8e-55, P = 4.8e-55
 Identities = 104/165 (63%), Positives = 128/165 (77%)

Query:    25 NKVNYTTNCETLRLGQYICPDPDPKYEYIDRKTQQPKNCTKENLARVRCIAADNIICLET 84
             +++N   N E   +GQ++CPDP      ID KTQQ   CT+E  ARV CIAA+ I C ET
Sbjct:    17 HQINVDCN-ELQMMGQFMCPDP--ARGQIDPKTQQLAGCTREGRARVWCIAANEINCTET 73

Query:    85 GNSTFYKDMRCRWTNGYSFETAMLLSIFLGMFGADRFYLGYPALGLLKFCTLGFMLIGYL 144
             GN+TF +++ C+WTNGY  +T +LLS+FLGMFG DRFYLGYP +GLLKFCTLG M +G L
Sbjct:    74 GNATFTREVPCKWTNGYHLDTTLLLSVFLGMFGVDRFYLGYPGIGLLKFCTLGGMFLGQL 133

Query:   145 VDIILIATQIVGPADGSYYIIPYYGAGITIVRSDNETYRVPQDDW 189
             +DI+LIA Q+VGPADGS Y+IPYYGAGI IVRSDN TYR+P+DDW
Sbjct:   134 IDIVLIALQVVGPADGSAYVIPYYGAGIHIVRSDNTTYRLPRDDW 178




GO:0005575 "cellular_component" evidence=ND
GO:0003674 "molecular_function" evidence=ND
GO:0008150 "biological_process" evidence=ND
UNIPROTKB|J3KPA2 TM2D1 "TM2 domain containing 1, isoform CRA_c" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|Q9BX74 TM2D1 "TM2 domain-containing protein 1" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|Q2KI73 TM2D1 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
MGI|MGI:2137022 Tm2d1 "TM2 domain containing 1" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|F1NDW3 TM2D1 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-050208-580 tm2d1 "TM2 domain containing 1" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
WB|WBGene00013446 Y66D12A.21 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
RGD|1305442 Tm2d1 "TM2 domain containing 1" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
FB|FBgn0000077 amx "almondex" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9BX74TM2D1_HUMANNo assigned EC number0.54260.76020.7198yesN/A
A5PLH4TM2D1_DANRENo assigned EC number0.50590.78060.7766yesN/A
Q9W2H1TM2D1_DROMENo assigned EC number0.63030.82650.9101yesN/A
Q99MB3TM2D1_MOUSENo assigned EC number0.53610.77040.7259yesN/A
Q95PJ8TM2D3_CAEELNo assigned EC number0.39500.78570.8603yesN/A

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query196
pfam0515451 pfam05154, TM2, TM2 domain 9e-14
PHA0188678 PHA01886, PHA01886, TM2 domain-containing protein 5e-09
COG231495 COG2314, XynA, Predicted membrane protein [Functio 2e-04
>gnl|CDD|218469 pfam05154, TM2, TM2 domain Back     alignment and domain information
 Score = 62.6 bits (153), Expect = 9e-14
 Identities = 23/51 (45%), Positives = 30/51 (58%), Gaps = 1/51 (1%)

Query: 99  NGYSFETAMLLSIFLGMFGADRFYLGYPALGLLKFCT-LGFMLIGYLVDII 148
              S   A+LLS+FLG FG  RFYLG    G+L   T  G + I +L+D+I
Sbjct: 1   KKKSKLIALLLSLFLGGFGVHRFYLGKTGTGILYLLTFWGILGIWWLIDLI 51


This family is composed of a pair of transmembrane alpha helices connected by a short linker. The function of this domain is unknown, however it occurs in a wide range or protein contexts. Length = 51

>gnl|CDD|222840 PHA01886, PHA01886, TM2 domain-containing protein Back     alignment and domain information
>gnl|CDD|225196 COG2314, XynA, Predicted membrane protein [Function unknown] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 196
KOG4272|consensus164 100.0
PHA0188678 TM2 domain-containing protein 99.79
PF0515451 TM2: TM2 domain; InterPro: IPR007829 This domain i 99.6
COG231495 XynA Predicted membrane protein [Function unknown] 98.37
>KOG4272|consensus Back     alignment and domain information
Probab=100.00  E-value=9e-46  Score=304.36  Aligned_cols=139  Identities=53%  Similarity=0.885  Sum_probs=126.1

Q ss_pred             CcceeeecCCCCCCcccCCCCCCCCccCCcCCCCc-cC-CCCCC--------ceeEEeeecCceeeccCCCceeeecccc
Q psy8106          26 KVNYTTNCETLRLGQYICPDPDPKYEYIDRKTQQP-KN-CTKEN--------LARVRCIAADNIICLETGNSTFYKDMRC   95 (196)
Q Consensus        26 ~~~~~v~C~~L~~~~~~C~~~~p~~~~id~~t~~~-~~-C~~~~--------~~~v~C~~~~~I~C~~~gnr~F~k~~pc   95 (196)
                      ....+++|++|++.||.|++|++.. .+|.+|||+ .+ |.+.+        .+.++|++.+++||.  +||+|.|++||
T Consensus        16 ~~~~~v~C~~l~~~~~~C~dp~~~~-~~~~~tQq~~~~~C~~~~~~~~~c~~at~ikC~~~~~v~c~--~~rtF~k~~pC   92 (164)
T KOG4272|consen   16 PCTPNVKCRYLKPVQFLCKDPVSCV-GPDTKTQQPTCGFCWQLGGADYECEPATNIKCTVLDGVECH--GNRTFPKEIPC   92 (164)
T ss_pred             CCCccEEeecCCceEEEcCCCcccC-CccccccccccchhhhcCCceeEeecCCcceeEecCCceee--cccccccccce
Confidence            5566799999999999999976633 378889997 55 88865        456788888888886  79999999999


Q ss_pred             cccCCchHHHHHHHHHHhccccceEEEcCCCchhHHHHHHhhhhhHHHHHHHHHHHhhcccCCCCCcccccCC
Q psy8106          96 RWTNGYSFETAMLLSIFLGMFGADRFYLGYPALGLLKFCTLGFMLIGYLVDIILIATQIVGPADGSYYIIPYY  168 (196)
Q Consensus        96 ~~~~~ks~~~A~lLslflG~fG~HRFYLG~~~~Gil~L~T~Gg~gIw~iiD~ilI~~~~~~paDGs~y~~~~~  168 (196)
                      +|++|+++.+|++||+|||+||+||||||++++|++||+|+|++||||+||+|+|++++++|||||.|++ ||
T Consensus        93 ~~~~Gy~~~ttlllSifLG~fG~DRFyLGy~~~glgKl~tlGGlgIw~lVDiiLI~lg~vgPaDGS~yi~-yY  164 (164)
T KOG4272|consen   93 NWTNGYSWTTTLLLSIFLGGFGADRFYLGYWALGLGKLFTLGGLGIWWLVDIILISLGYVGPADGSSYII-YY  164 (164)
T ss_pred             eeecCeEehHHHHHHHHhhhccccEEEeCchHHhHhhhhccccchhHHHHHHHHHHhcccccCCCceEEE-eC
Confidence            9999999999999999999999999999999999999999999999999999999999999999999987 76



>PHA01886 TM2 domain-containing protein Back     alignment and domain information
>PF05154 TM2: TM2 domain; InterPro: IPR007829 This domain is composed of a pair of transmembrane alpha helices connected by a short linker Back     alignment and domain information
>COG2314 XynA Predicted membrane protein [Function unknown] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00