Psyllid ID: psy8934

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------13
Protein Sequence
STPAEDVESVPLAQSLLNAICDLLFCPDFTVASNKKFNSRKKMDYILNCTLSFGGLKLGTQDNLFINYLSRIHRDEDFQFVLAGFSRLLNNPLLQTYLPNSTKKIEFHQELLVLFWKMCDYNKHNKESR
Secondary Structure (PSIPRED)
ccccccccHHHHHHHHHHHHHcccccccccccccccccccccccEEEEEccccccccccccccHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHcccccccc
Secondary Structure Prediction (SSPRO)
cccccccccHHHHHHHHHHHHHHHcccccccccccccccHHHccEEEEEEEEEccccccccccHHHHHHHHcccHHHHHHHHHHHHHHHHcccHHccccccccccccHHHHHHHHHHHHHHHccccccc
Coil and Loop (DISEMBL)
stpaedvesvpLAQSLLNAICDllfcpdftvasnkkfnsrkKMDYILNCTlsfgglklgtqdnLFINYLSRIHRDEDFQFVLAGFSRLlnnpllqtylpnstkkIEFHQELLVLFWKMCdynkhnkesr
Flexible Loop (DISEMBL)
stpaedvesvPLAQSLLNAICDLLFCPDFTVASnkkfnsrkKMDYILNCTLSFGGLKLGTQDNLFINYLSRIHRDEDFQFVLAGFSRLLNNPLLQTYLPNSTKKIEFHQELLVLFWKMCDynkhnkesr
Low Complexity Region (SEG)
STPAEDVESVPLAQSLLNAICDLLFCPDFTVASNKKFNSRKKMDYILNCTLSFGGLKLGTQDNLFINYLSRIHRDEDFQFVLAGFSRLLNNPLLQTYLPNSTKKIEFHQELLVLFWKMCDYNKHNKESR
Disordered region (IsUnstruct)
***********LAQSLLNAICDLLFCPDFTVASNKKFNSRKKMDYILNCTLSFGGLKLGTQDNLFINYLSRIHRDEDFQFVLAGFSRLLNNPLLQTYLPNSTKKIEFHQELLVLFWKMCDYN*******
Disordered Region (DISOPRED)
***AEDVESVPLAQSLLNAICDLLFCPDFTVASNKKFNSRKKMDYILNCTLSF**********LFINYLSRIHRDEDFQFVLAGFSRLLNNPLLQTY*PNSTKKIEFHQELLVLFWKMCDYNKHN****
Disordered Region (DISEMBL)
*********VPLAQSLLNAICDLLFCPDFTVASNKKFNSRKKMDYILNCTLSFGGLKLGTQDNLFINYLSRIHRDEDFQFVLAGFSRLLNNPLLQTYLPNSTKKIEFHQELLVLFWKMCDYNKHNKESR
Disordered Region (DISPRO)
*******ESVPLAQSLLNAICDLLFCPDFTVASNKKFNSRKKMDYILNCTLSFGGLKLGTQDNLFINYLSRIHRDEDFQFVLAGFSRLLNNPLLQTYLPNSTKKIEFHQELLVLFWKMCDYNKHN****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
STPAEDVESVPLAQSLLNAICDLLFCPDFTVASNKKFNSRKKMDYILNCTLSFGGLKLGTQDNLFINYLSRIHRDEDFQFVLAGFSRLLNNPLLQTYLPNSTKKIEFHQELLVLFWKMCDYNKHNKESR
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	129	2.2.26 [Sep-21-2011]
Q8IV36	788	Protein HID1 OS=Homo sapi	yes	N/A	0.457	0.074	0.822	8e-27
Q8R1F6	788	Protein HID1 OS=Mus muscu	yes	N/A	0.403	0.065	0.822	9e-27
Q54JJ6	905	Protein HID1 OS=Dictyoste	yes	N/A	0.465	0.066	0.467	8e-09

>sp|Q8IV36|HID1_HUMAN Protein HID1 OS=Homo sapiens GN=HID1 PE=1 SV=1

 Score =  118 bits (296), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 51/62 (82%), Positives = 60/62 (96%)

Query: 62  DNLFINYLSRIHRDEDFQFVLAGFSRLLNNPLLQTYLPNSTKKIEFHQELLVLFWKMCDY 121
           +NLF+NYLSRIHR+EDFQF+L G +RLL+NPLLQTYLPNSTKKI+FHQELLVLFWK+CD+
Sbjct: 322 ENLFVNYLSRIHREEDFQFILKGIARLLSNPLLQTYLPNSTKKIQFHQELLVLFWKLCDF 381

Query: 122 NK 123
           NK
Sbjct: 382 NK 383

May play an important role in the development of cancers in a broad range of tissues.
Homo sapiens (taxid: 9606)

>sp|Q8R1F6|HID1_MOUSE Protein HID1 OS=Mus musculus GN=Hid1 PE=1 SV=1

 Score =  118 bits (296), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 51/62 (82%), Positives = 60/62 (96%)

Query: 62  DNLFINYLSRIHRDEDFQFVLAGFSRLLNNPLLQTYLPNSTKKIEFHQELLVLFWKMCDY 121
           +NLF+NYLSRIHR+EDFQF+L G +RLL+NPLLQTYLPNSTKKI+FHQELLVLFWK+CD+
Sbjct: 322 ENLFVNYLSRIHREEDFQFILKGIARLLSNPLLQTYLPNSTKKIQFHQELLVLFWKLCDF 381

Query: 122 NK 123
           NK
Sbjct: 382 NK 383

Mus musculus (taxid: 10090)

>sp|Q54JJ6|HID1_DICDI Protein HID1 OS=Dictyostelium discoideum GN=hid1 PE=3 SV=1

 Score = 58.9 bits (141), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 29/62 (46%), Positives = 36/62 (58%), Gaps = 2/62 (3%)

Query: 63  NLFINYLSRIHRDEDFQFVLAGFSRLLNNPLL--QTYLPNSTKKIEFHQELLVLFWKMCD 120
           N FI Y+  + R  DF+F    F R++N PL+   T LPNSTKKIE HQ+L    W    
Sbjct: 411 NKFIQYIKTLKRVRDFKFFFNAFERIMNVPLIASHTKLPNSTKKIELHQDLTYTMWLFLS 470

Query: 121 YN 122
           YN
Sbjct: 471 YN 472

Dictyostelium discoideum (taxid: 44689)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	129
242008660	790	conserved hypothetical protein [Pediculu	0.914	0.149	0.529	4e-28
332022774	754	UPF0663 transmembrane protein C17orf28 [	0.906	0.155	0.528	1e-27
307187905	781	Transmembrane protein C17orf28-like prot	0.906	0.149	0.536	1e-27
322791200	543	hypothetical protein SINV_05188 [Solenop	0.542	0.128	0.794	3e-27
350398971	778	PREDICTED: UPF0663 transmembrane protein	0.891	0.147	0.521	4e-27
307195455	783	Transmembrane protein C17orf28 [Harpegna	0.906	0.149	0.550	4e-27
156548268	777	PREDICTED: UPF0663 transmembrane protein	0.906	0.150	0.514	6e-27
345486109	740	PREDICTED: UPF0663 transmembrane protein	0.906	0.158	0.514	6e-27
340712094	778	PREDICTED: UPF0663 transmembrane protein	0.891	0.147	0.521	7e-27
383861178	760	PREDICTED: protein hid-1 homolog [Megach	0.891	0.151	0.528	1e-26

>gi|242008660|ref|XP_002425120.1| conserved hypothetical protein [Pediculus humanus corporis] gi|212508794|gb|EEB12382.1| conserved hypothetical protein [Pediculus humanus corporis]

 Score =  129 bits (324), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 71/134 (52%), Positives = 87/134 (64%), Gaps = 16/134 (11%)

Query: 2   TPAEDVESVPLAQSLLNAIC------------DLLFCPDFTVASNKKFNSRKKMDYILNC 49
           T AE+  ++P+  SLLN +C             LLF      A      + + +   L+ 
Sbjct: 233 TSAENRHALPMFTSLLNTVCAYDPVGLGVPYNHLLFS---DTAEPLVDTALQILIVTLDH 289

Query: 50  TLSFGGLKLGTQDNLFINYLSRIHRDEDFQFVLAGFSRLLNNPLLQTYLPNSTKKIEFHQ 109
             S G   + + DNLFINYLSRIHRDEDFQFVL GF+RLLNNPL+QTYLPNSTKK++FHQ
Sbjct: 290 DTSLGDENVSS-DNLFINYLSRIHRDEDFQFVLGGFTRLLNNPLVQTYLPNSTKKVQFHQ 348

Query: 110 ELLVLFWKMCDYNK 123
           ELLV FWK+CDYNK
Sbjct: 349 ELLVFFWKLCDYNK 362

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332022774|gb|EGI63047.1| UPF0663 transmembrane protein C17orf28 [Acromyrmex echinatior]

 Score =  127 bits (320), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 73/138 (52%), Positives = 87/138 (63%), Gaps = 21/138 (15%)

Query: 2   TPAEDVESVPLAQSLLNAICDLLFCPDFTVASNKKFNSRKKMD----------YILNCTL 51
           T +E+  ++P+  SLLN +C   + P   V     +N     D           IL  TL
Sbjct: 230 TSSENRHALPMFTSLLNTVCA--YDP---VGYGVPYNHLLFTDSLEPLVDVALQILIVTL 284

Query: 52  ---SFGGLKL---GTQDNLFINYLSRIHRDEDFQFVLAGFSRLLNNPLLQTYLPNSTKKI 105
              + GG+ +      DNLFINYLSRIHRDEDFQFVL G +RLLNNPL+QTYLPNSTKK+
Sbjct: 285 DHDTTGGIPMEEGAVGDNLFINYLSRIHRDEDFQFVLKGITRLLNNPLMQTYLPNSTKKV 344

Query: 106 EFHQELLVLFWKMCDYNK 123
            FHQELLV FWKMCDYNK
Sbjct: 345 HFHQELLVFFWKMCDYNK 362

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307187905|gb|EFN72818.1| Transmembrane protein C17orf28-like protein [Camponotus floridanus]

 Score =  127 bits (319), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 74/138 (53%), Positives = 86/138 (62%), Gaps = 21/138 (15%)

Query: 2   TPAEDVESVPLAQSLLNAICDLLFCPDFTVASNKKFNSRKKMD----------YILNCTL 51
           T +E+  ++P+  SLLN +C   + P   V     +N     D           IL  TL
Sbjct: 230 TSSENRHALPMFTSLLNTVC--AYDP---VGYGVPYNHLLFTDSLEPLVDVALQILIVTL 284

Query: 52  ---SFGGLKL---GTQDNLFINYLSRIHRDEDFQFVLAGFSRLLNNPLLQTYLPNSTKKI 105
              + GG  L      DNLFINYLSRIHRDEDFQFVL G +RLLNNPL+QTYLPNSTKK+
Sbjct: 285 DHDTTGGAPLEEGAVGDNLFINYLSRIHRDEDFQFVLKGITRLLNNPLMQTYLPNSTKKV 344

Query: 106 EFHQELLVLFWKMCDYNK 123
            FHQELLV FWKMCDYNK
Sbjct: 345 HFHQELLVFFWKMCDYNK 362

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|322791200|gb|EFZ15737.1| hypothetical protein SINV_05188 [Solenopsis invicta]

 Score =  126 bits (317), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 58/73 (79%), Positives = 62/73 (84%), Gaps = 3/73 (4%)

Query: 54  GGLKL---GTQDNLFINYLSRIHRDEDFQFVLAGFSRLLNNPLLQTYLPNSTKKIEFHQE 110
           GG+ L      DNLFINYLSRIHRDEDFQFVL G +RLLNNPL+QTYLPNSTKK+ FHQE
Sbjct: 51  GGVPLEEGAVGDNLFINYLSRIHRDEDFQFVLKGITRLLNNPLMQTYLPNSTKKVHFHQE 110

Query: 111 LLVLFWKMCDYNK 123
           LLV FWKMCDYNK
Sbjct: 111 LLVFFWKMCDYNK 123

Source: Solenopsis invicta

Species: Solenopsis invicta

Genus: Solenopsis

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350398971|ref|XP_003485368.1| PREDICTED: UPF0663 transmembrane protein C17orf28-like [Bombus impatiens]

 Score =  126 bits (316), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 73/140 (52%), Positives = 84/140 (60%), Gaps = 25/140 (17%)

Query: 2   TPAEDVESVPLAQSLLNAIC------------DLLFCPDFTVASNKKFNSRKKMDYILNC 49
           T +E+  ++P+  SLLN +C             LLF        +           IL  
Sbjct: 230 TSSENRHALPMFTSLLNTVCAYDPVGLGVPYNHLLFTDSLEPLVDVALQ-------ILIV 282

Query: 50  TL---SFGGLKL---GTQDNLFINYLSRIHRDEDFQFVLAGFSRLLNNPLLQTYLPNSTK 103
           TL   + GG  L      DNLFINYLSRIHRDEDFQFVL G +RLLNNPL+QTYLPNSTK
Sbjct: 283 TLDHDTSGGTPLEEGSIGDNLFINYLSRIHRDEDFQFVLKGITRLLNNPLMQTYLPNSTK 342

Query: 104 KIEFHQELLVLFWKMCDYNK 123
           K+ FHQELLV FWKMCDYNK
Sbjct: 343 KVHFHQELLVFFWKMCDYNK 362

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307195455|gb|EFN77341.1| Transmembrane protein C17orf28 [Harpegnathos saltator]

 Score =  125 bits (315), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 76/138 (55%), Positives = 87/138 (63%), Gaps = 21/138 (15%)

Query: 2   TPAEDVESVPLAQSLLNAICDLLFCPDFTVASNKKFNSRKKMD----------YILNCTL 51
           T +E+   +P+  SLLN +C   + P   V     +N     D           IL  TL
Sbjct: 230 TSSENRHVLPMFTSLLNTVC--AYDP---VGYGVPYNHLLFTDSLEPLVDVALQILIVTL 284

Query: 52  ---SFGGLKL--GT-QDNLFINYLSRIHRDEDFQFVLAGFSRLLNNPLLQTYLPNSTKKI 105
              + GG  L  GT  DNLFINYLSRIHRDEDFQFVL G +RLLNNPL+QTYLPNSTKK+
Sbjct: 285 DHDTTGGAPLEEGTIGDNLFINYLSRIHRDEDFQFVLKGITRLLNNPLMQTYLPNSTKKV 344

Query: 106 EFHQELLVLFWKMCDYNK 123
            FHQELLV FWKMCDYNK
Sbjct: 345 HFHQELLVFFWKMCDYNK 362

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|156548268|ref|XP_001601368.1| PREDICTED: UPF0663 transmembrane protein C17orf28 homolog isoform 1 [Nasonia vitripennis]

 Score =  125 bits (314), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 71/138 (51%), Positives = 87/138 (63%), Gaps = 21/138 (15%)

Query: 2   TPAEDVESVPLAQSLLNAIC------------DLLFC----PDFTVASNKKFNSRKKMDY 45
           T +E+  ++P+  SLLN +C             LLF     P   VA      +   +D+
Sbjct: 230 TSSENRHALPMFTSLLNTVCAYDPVGFGVPYNHLLFTDSLEPLVDVALQILIVT---LDH 286

Query: 46  ILNCTLSFGGLKLGTQDNLFINYLSRIHRDEDFQFVLAGFSRLLNNPLLQTYLPNSTKKI 105
             +C  +     +G  DNLFINYLSRIHRDEDFQFVL G +RLLNNPL+QTYLPNSTKK+
Sbjct: 287 DTSCGANMEEGAVG--DNLFINYLSRIHRDEDFQFVLKGITRLLNNPLMQTYLPNSTKKV 344

Query: 106 EFHQELLVLFWKMCDYNK 123
            FHQELLV FWK+CDYNK
Sbjct: 345 HFHQELLVFFWKLCDYNK 362

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|345486109|ref|XP_003425403.1| PREDICTED: UPF0663 transmembrane protein C17orf28 homolog isoform 2 [Nasonia vitripennis]

 Score =  125 bits (313), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 71/138 (51%), Positives = 87/138 (63%), Gaps = 21/138 (15%)

Query: 2   TPAEDVESVPLAQSLLNAIC------------DLLFC----PDFTVASNKKFNSRKKMDY 45
           T +E+  ++P+  SLLN +C             LLF     P   VA      +   +D+
Sbjct: 230 TSSENRHALPMFTSLLNTVCAYDPVGFGVPYNHLLFTDSLEPLVDVALQILIVT---LDH 286

Query: 46  ILNCTLSFGGLKLGTQDNLFINYLSRIHRDEDFQFVLAGFSRLLNNPLLQTYLPNSTKKI 105
             +C  +     +G  DNLFINYLSRIHRDEDFQFVL G +RLLNNPL+QTYLPNSTKK+
Sbjct: 287 DTSCGANMEEGAVG--DNLFINYLSRIHRDEDFQFVLKGITRLLNNPLMQTYLPNSTKKV 344

Query: 106 EFHQELLVLFWKMCDYNK 123
            FHQELLV FWK+CDYNK
Sbjct: 345 HFHQELLVFFWKLCDYNK 362

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340712094|ref|XP_003394599.1| PREDICTED: UPF0663 transmembrane protein C17orf28-like [Bombus terrestris]

 Score =  125 bits (313), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 73/140 (52%), Positives = 84/140 (60%), Gaps = 25/140 (17%)

Query: 2   TPAEDVESVPLAQSLLNAIC------------DLLFCPDFTVASNKKFNSRKKMDYILNC 49
           T +E+  ++P+  SLLN +C             LLF        +           IL  
Sbjct: 230 TSSENRHALPMFTSLLNTVCAYDPVGLGVPYNHLLFTDSLEPLVDVALQ-------ILIV 282

Query: 50  TL---SFGGLKLG---TQDNLFINYLSRIHRDEDFQFVLAGFSRLLNNPLLQTYLPNSTK 103
           TL   + GG  L      DNLFINYLSRIHRDEDFQFVL G +RLLNNPL+QTYLPNSTK
Sbjct: 283 TLDHDTSGGTPLEEGCIGDNLFINYLSRIHRDEDFQFVLKGITRLLNNPLMQTYLPNSTK 342

Query: 104 KIEFHQELLVLFWKMCDYNK 123
           K+ FHQELLV FWKMCDYNK
Sbjct: 343 KVHFHQELLVFFWKMCDYNK 362

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383861178|ref|XP_003706063.1| PREDICTED: protein hid-1 homolog [Megachile rotundata]

 Score =  124 bits (312), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 74/140 (52%), Positives = 86/140 (61%), Gaps = 25/140 (17%)

Query: 2   TPAEDVESVPLAQSLLNAIC------------DLLFCPDFTVASNKKFNSRKKMDYILNC 49
           T +E+  ++P+  SLLN +C             LLF        +           IL  
Sbjct: 230 TSSENRHALPMFTSLLNTVCAYDPVGLGVPYNHLLFTDSLEPLVDVALQ-------ILIV 282

Query: 50  TL---SFGGLKL--GT-QDNLFINYLSRIHRDEDFQFVLAGFSRLLNNPLLQTYLPNSTK 103
           TL   + GG  L  GT  +NLFINYLSRIHRDEDFQFVL G +RLLNNPL+QTYLPNSTK
Sbjct: 283 TLDHDTSGGTPLEEGTVGNNLFINYLSRIHRDEDFQFVLKGITRLLNNPLMQTYLPNSTK 342

Query: 104 KIEFHQELLVLFWKMCDYNK 123
           K+ FHQELLV FWKMCDYNK
Sbjct: 343 KVHFHQELLVFFWKMCDYNK 362

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	129
UNIPROTKB|F1PV04	782	C17orf28 "Uncharacterized prot	0.480	0.079	0.822	7.4e-27
UNIPROTKB|F6QK33	787	C19H17orf28 "Uncharacterized p	0.480	0.078	0.822	7.6e-27
UNIPROTKB|Q8IV36	788	HID1 "Protein HID1" [Homo sapi	0.480	0.078	0.822	7.6e-27
MGI|MGI:2445087	788	Hid1 "HID1 domain containing"	0.480	0.078	0.822	7.6e-27
UNIPROTKB|D4A0C3	788	RGD1311422 "Protein RGD1311422	0.480	0.078	0.822	7.6e-27
UNIPROTKB|F1RVV6	796	C17orf28 "Uncharacterized prot	0.480	0.077	0.822	1.6e-26
UNIPROTKB|E1C0V2	796	C18H17orf28 "Uncharacterized p	0.480	0.077	0.806	2.7e-26
ZFIN|ZDB-GENE-040718-239	804	hid1b "HID1 domain containing	0.480	0.077	0.790	2.6e-25
WB|WBGene00001844	729	hid-1 [Caenorhabditis elegans	0.503	0.089	0.641	6.9e-19
RGD|1311422	272	Hid1 "HID1 domain containing"	0.310	0.147	0.8	4.8e-17

UNIPROTKB|F1PV04 C17orf28 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 294 (108.6 bits), Expect = 7.4e-27, Sum P(2) = 7.4e-27
 Identities = 51/62 (82%), Positives = 60/62 (96%)

Query:    62 DNLFINYLSRIHRDEDFQFVLAGFSRLLNNPLLQTYLPNSTKKIEFHQELLVLFWKMCDY 121
             +NLF+NYLSRIHR+EDFQF+L G +RLL+NPLLQTYLPNSTKKI+FHQELLVLFWK+CD+
Sbjct:   314 ENLFVNYLSRIHREEDFQFILKGIARLLSNPLLQTYLPNSTKKIQFHQELLVLFWKLCDF 373

Query:   122 NK 123
             NK
Sbjct:   374 NK 375

GO:0031001 "response to brefeldin A" evidence=IEA

GO:0006886 "intracellular protein transport" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0005797 "Golgi medial cisterna" evidence=IEA

GO:0000139 "Golgi membrane" evidence=IEA

GO:0000138 "Golgi trans cisterna" evidence=IEA

UNIPROTKB|F6QK33 C19H17orf28 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 294 (108.6 bits), Expect = 7.6e-27, Sum P(2) = 7.6e-27
 Identities = 51/62 (82%), Positives = 60/62 (96%)

Query:    62 DNLFINYLSRIHRDEDFQFVLAGFSRLLNNPLLQTYLPNSTKKIEFHQELLVLFWKMCDY 121
             +NLF+NYLSRIHR+EDFQF+L G +RLL+NPLLQTYLPNSTKKI+FHQELLVLFWK+CD+
Sbjct:   321 ENLFVNYLSRIHREEDFQFILKGIARLLSNPLLQTYLPNSTKKIQFHQELLVLFWKLCDF 380

Query:   122 NK 123
             NK
Sbjct:   381 NK 382

GO:0031001 "response to brefeldin A" evidence=IEA

GO:0006886 "intracellular protein transport" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0005797 "Golgi medial cisterna" evidence=IEA

GO:0000139 "Golgi membrane" evidence=IEA

GO:0000138 "Golgi trans cisterna" evidence=IEA

UNIPROTKB|Q8IV36 HID1 "Protein HID1" [Homo sapiens (taxid:9606)]

 Score = 294 (108.6 bits), Expect = 7.6e-27, Sum P(2) = 7.6e-27
 Identities = 51/62 (82%), Positives = 60/62 (96%)

Query:    62 DNLFINYLSRIHRDEDFQFVLAGFSRLLNNPLLQTYLPNSTKKIEFHQELLVLFWKMCDY 121
             +NLF+NYLSRIHR+EDFQF+L G +RLL+NPLLQTYLPNSTKKI+FHQELLVLFWK+CD+
Sbjct:   322 ENLFVNYLSRIHREEDFQFILKGIARLLSNPLLQTYLPNSTKKIQFHQELLVLFWKLCDF 381

Query:   122 NK 123
             NK
Sbjct:   382 NK 383

GO:0005737 "cytoplasm" evidence=IDA

GO:0005797 "Golgi medial cisterna" evidence=IDA

GO:0000138 "Golgi trans cisterna" evidence=IDA

GO:0031001 "response to brefeldin A" evidence=IDA

GO:0090498 "extrinsic to Golgi membrane" evidence=IDA

GO:0006886 "intracellular protein transport" evidence=IDA

GO:0005881 "cytoplasmic microtubule" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0005886 "plasma membrane" evidence=IDA

MGI|MGI:2445087 Hid1 "HID1 domain containing" [Mus musculus (taxid:10090)]

 Score = 294 (108.6 bits), Expect = 7.6e-27, Sum P(2) = 7.6e-27
 Identities = 51/62 (82%), Positives = 60/62 (96%)

Query:    62 DNLFINYLSRIHRDEDFQFVLAGFSRLLNNPLLQTYLPNSTKKIEFHQELLVLFWKMCDY 121
             +NLF+NYLSRIHR+EDFQF+L G +RLL+NPLLQTYLPNSTKKI+FHQELLVLFWK+CD+
Sbjct:   322 ENLFVNYLSRIHREEDFQFILKGIARLLSNPLLQTYLPNSTKKIQFHQELLVLFWKLCDF 381

Query:   122 NK 123
             NK
Sbjct:   382 NK 383

GO:0000138 "Golgi trans cisterna" evidence=ISO

GO:0003674 "molecular_function" evidence=ND

GO:0005737 "cytoplasm" evidence=ISO

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0005797 "Golgi medial cisterna" evidence=ISO

GO:0005881 "cytoplasmic microtubule" evidence=ISO

GO:0006886 "intracellular protein transport" evidence=ISO

GO:0016020 "membrane" evidence=IEA

GO:0031001 "response to brefeldin A" evidence=ISO

GO:0090498 "extrinsic to Golgi membrane" evidence=ISO

UNIPROTKB|D4A0C3 RGD1311422 "Protein RGD1311422" [Rattus norvegicus (taxid:10116)]

 Score = 294 (108.6 bits), Expect = 7.6e-27, Sum P(2) = 7.6e-27
 Identities = 51/62 (82%), Positives = 60/62 (96%)

Query:    62 DNLFINYLSRIHRDEDFQFVLAGFSRLLNNPLLQTYLPNSTKKIEFHQELLVLFWKMCDY 121
             +NLF+NYLSRIHR+EDFQF+L G +RLL+NPLLQTYLPNSTKKI+FHQELLVLFWK+CD+
Sbjct:   322 ENLFVNYLSRIHREEDFQFILKGIARLLSNPLLQTYLPNSTKKIQFHQELLVLFWKLCDF 381

Query:   122 NK 123
             NK
Sbjct:   382 NK 383

GO:0000138 "Golgi trans cisterna" evidence=IEA

GO:0000139 "Golgi membrane" evidence=IEA

GO:0005797 "Golgi medial cisterna" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0006886 "intracellular protein transport" evidence=IEA

GO:0031001 "response to brefeldin A" evidence=IEA

UNIPROTKB|F1RVV6 C17orf28 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 294 (108.6 bits), Expect = 1.6e-26, Sum P(2) = 1.6e-26
 Identities = 51/62 (82%), Positives = 60/62 (96%)

Query:    62 DNLFINYLSRIHRDEDFQFVLAGFSRLLNNPLLQTYLPNSTKKIEFHQELLVLFWKMCDY 121
             +NLF+NYLSRIHR+EDFQF+L G +RLL+NPLLQTYLPNSTKKI+FHQELLVLFWK+CD+
Sbjct:   322 ENLFVNYLSRIHREEDFQFILKGIARLLSNPLLQTYLPNSTKKIQFHQELLVLFWKLCDF 381

Query:   122 NK 123
             NK
Sbjct:   382 NK 383

GO:0031001 "response to brefeldin A" evidence=IEA

GO:0006886 "intracellular protein transport" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0005797 "Golgi medial cisterna" evidence=IEA

GO:0000139 "Golgi membrane" evidence=IEA

GO:0000138 "Golgi trans cisterna" evidence=IEA

UNIPROTKB|E1C0V2 C18H17orf28 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 289 (106.8 bits), Expect = 2.7e-26, Sum P(2) = 2.7e-26
 Identities = 50/62 (80%), Positives = 59/62 (95%)

Query:    62 DNLFINYLSRIHRDEDFQFVLAGFSRLLNNPLLQTYLPNSTKKIEFHQELLVLFWKMCDY 121
             DNLF+NYLSRIHR+EDFQF+L G +RLL+NPL+QTYLPNS KKI+FHQELLVLFWK+CD+
Sbjct:   321 DNLFVNYLSRIHREEDFQFILKGVARLLSNPLVQTYLPNSAKKIQFHQELLVLFWKLCDF 380

Query:   122 NK 123
             NK
Sbjct:   381 NK 382

GO:0000138 "Golgi trans cisterna" evidence=IEA

GO:0000139 "Golgi membrane" evidence=IEA

GO:0005797 "Golgi medial cisterna" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0006886 "intracellular protein transport" evidence=IEA

GO:0031001 "response to brefeldin A" evidence=IEA

ZFIN|ZDB-GENE-040718-239 hid1b "HID1 domain containing b" [Danio rerio (taxid:7955)]

 Score = 280 (103.6 bits), Expect = 2.6e-25, Sum P(2) = 2.6e-25
 Identities = 49/62 (79%), Positives = 57/62 (91%)

Query:    62 DNLFINYLSRIHRDEDFQFVLAGFSRLLNNPLLQTYLPNSTKKIEFHQELLVLFWKMCDY 121
             +NLF+NYLSRIHR+EDF F+L G SRLLNNPL+QTYLP+S KKI+FHQELLVLFWK+CD 
Sbjct:   322 ENLFVNYLSRIHREEDFNFILRGISRLLNNPLMQTYLPHSCKKIQFHQELLVLFWKLCDL 381

Query:   122 NK 123
             NK
Sbjct:   382 NK 383

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

WB|WBGene00001844 hid-1 [Caenorhabditis elegans (taxid:6239)]

 Score = 237 (88.5 bits), Expect = 6.9e-19, P = 6.9e-19
 Identities = 43/67 (64%), Positives = 54/67 (80%)

Query:    59 GTQDNLFINYLSRIHRDEDFQFVLAGFSRLLNNPL--LQTYLPNSTKKIEFHQELLVLFW 116
             G +DN FINYLSRIHR+EDF F+L G +RLL+NP+    +YLPNSTK++ FHQELLVL W
Sbjct:   282 GYKDNYFINYLSRIHREEDFDFMLKGITRLLSNPIHSSSSYLPNSTKRVNFHQELLVLLW 341

Query:   117 KMCDYNK 123
             K C+ N+
Sbjct:   342 KCCEINQ 348

GO:0040010 "positive regulation of growth rate" evidence=IMP

GO:0000003 "reproduction" evidence=IMP

GO:0009408 "response to heat" evidence=IMP

GO:0040024 "dauer larval development" evidence=IMP

GO:0040011 "locomotion" evidence=IMP

GO:0030421 "defecation" evidence=IMP

GO:0043005 "neuron projection" evidence=IDA

GO:0016020 "membrane" evidence=IDA

GO:0005797 "Golgi medial cisterna" evidence=IDA

GO:0000138 "Golgi trans cisterna" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

RGD|1311422 Hid1 "HID1 domain containing" [Rattus norvegicus (taxid:10116)]

 Score = 180 (68.4 bits), Expect = 4.8e-17, Sum P(2) = 4.8e-17
 Identities = 32/40 (80%), Positives = 38/40 (95%)

Query:    62 DNLFINYLSRIHRDEDFQFVLAGFSRLLNNPLLQTYLPNS 101
             +NLF+NYLSRIHR+EDFQF+L G +RLL+NPLLQTYLPNS
Sbjct:   233 ENLFVNYLSRIHREEDFQFILKGIARLLSNPLLQTYLPNS 272

GO:0000138 "Golgi trans cisterna" evidence=ISO

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0005737 "cytoplasm" evidence=ISO

GO:0005797 "Golgi medial cisterna" evidence=ISO

GO:0005881 "cytoplasmic microtubule" evidence=ISO

GO:0005886 "plasma membrane" evidence=ISO

GO:0006886 "intracellular protein transport" evidence=ISO

GO:0008150 "biological_process" evidence=ND

GO:0031001 "response to brefeldin A" evidence=ISO

GO:0090498 "extrinsic to Golgi membrane" evidence=ISO

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q8R1F6	HID1_MOUSE	No assigned EC number	0.8225	0.4031	0.0659	yes	N/A
Q8IV36	HID1_HUMAN	No assigned EC number	0.8225	0.4573	0.0748	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	129
pfam12722	813	pfam12722, Hid1, High-temperature-induced dauer-fo	2e-26
pfam09742	659	pfam09742, Dymeclin, Dyggve-Melchior-Clausen syndr	3e-11
pfam12722	813	pfam12722, Hid1, High-temperature-induced dauer-fo	1e-07

>gnl|CDD|221734 pfam12722, Hid1, High-temperature-induced dauer-formation protein

 Score =  102 bits (256), Expect = 2e-26
 Identities = 46/141 (32%), Positives = 67/141 (47%), Gaps = 26/141 (18%)

Query: 7   VESVPLAQSLLNAICDLLFCPDFTVASNKKFNSRKKMDY----------ILNCTLS---- 52
            E + L  SLLN +C   + P+        +N+    D           +L   L     
Sbjct: 249 HEVLCLLCSLLNTVCR--YNPNGWKEYGLPYNNSVFKDSREILVEYSLQLLLVMLLYPIP 306

Query: 53  --------FGGLKLGTQDNLFINYLSRIHRDEDFQFVLAGFSRLLNNPL--LQTYLPNST 102
                   + G K     NLF NYLSR+HR+ED QF+L G +R+L NP+    +YLPNS 
Sbjct: 307 SSTRLSFLYLGSKNSKPKNLFRNYLSRLHREEDLQFILDGLTRILKNPIQANSSYLPNSP 366

Query: 103 KKIEFHQELLVLFWKMCDYNK 123
           K + +  E+L+L W++   NK
Sbjct: 367 KVVPWAPEMLILLWELIQCNK 387

Hid1 (high-temperature-induced dauer-formation protein 1) represents proteins of approximately 800 residues long and is conserved from fungi to humans. It contains up to seven potential transmembrane domains separated by regions of low complexity. Functionally it might be involved in vesicle secretion or be an inter-cellular signalling protein or be a novel insulin receptor. Length = 813

>gnl|CDD|220375 pfam09742, Dymeclin, Dyggve-Melchior-Clausen syndrome protein

 Score = 59.0 bits (143), Expect = 3e-11
 Identities = 18/61 (29%), Positives = 26/61 (42%), Gaps = 5/61 (8%)

Query: 63  NLFINYLSRIHRDEDFQFVLAGFSRLLNNPLLQTYLPNSTKKIEFHQELLVLFWKMCDYN 122
            L + YLS I R                N +  + L +S  K+ FH ELL+L +K+   N
Sbjct: 320 RLALFYLSDIERSSSVSS-----LSGSENLIDFSALYDSLCKLLFHDELLLLLYKLLHRN 374

Query: 123 K 123
            
Sbjct: 375 S 375

Dymeclin (Dyggve-Melchior-Clausen syndrome protein) contains a large number of leucine and isoleucine residues and a total of 17 repeated dileucine motifs. It is characteristically about 700 residues long and present in plants and animals. Mutations in the gene coding for this protein in humans give rise to the disorder Dyggve-Melchior-Clausen syndrome (DMC, MIM 223800) which is an autosomal-recessive disorder characterized by the association of a spondylo-epi-metaphyseal dysplasia and mental retardation. DYM transcripts are widely expressed throughout human development and Dymeclin is not an integral membrane protein of the ER, but rather a peripheral membrane protein dynamically associated with the Golgi apparatus. Length = 659

>gnl|CDD|221734 pfam12722, Hid1, High-temperature-induced dauer-formation protein

 Score = 48.5 bits (116), Expect = 1e-07
 Identities = 21/43 (48%), Positives = 31/43 (72%), Gaps = 2/43 (4%)

Query: 5   EDVESVPLAQSLLNAICDLLFCPDFTVASNKKFNSRKKMDYIL 47
           ED ++ PL + LL+A+ DLLFCPDFTV S +  +S+ K+ Y +
Sbjct: 149 EDEDAKPLGEELLDALVDLLFCPDFTVPSPR--SSKGKVSYCI 189

Hid1 (high-temperature-induced dauer-formation protein 1) represents proteins of approximately 800 residues long and is conserved from fungi to humans. It contains up to seven potential transmembrane domains separated by regions of low complexity. Functionally it might be involved in vesicle secretion or be an inter-cellular signalling protein or be a novel insulin receptor. Length = 813

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	129
PF12722	895	Hid1: High-temperature-induced dauer-formation pro	100.0
KOG2226|consensus	786		99.96
PF09742	678	Dymeclin: Dyggve-Melchior-Clausen syndrome protein	98.4

>PF12722 Hid1: High-temperature-induced dauer-formation protein

Probab=100.00  E-value=1.9e-34  Score=265.64  Aligned_cols=122  Identities=45%  Similarity=0.768  Sum_probs=108.2

Q ss_pred             ccccccchHHHHHHHHHhhccCCCcccccCcccCcchhhHHHHHhhhccccC----------------------------
Q psy8934           5 EDVESVPLAQSLLNAICDLLFCPDFTVASNKKFNSRKKMDYILNCTLSFGGL----------------------------   56 (129)
Q Consensus         5 ~~~~~~pla~~l~~~l~dllf~~~~t~~~~~~~~~~~~~~~i~~~~v~~~~~----------------------------   56 (129)
                      ++++.+|||++||++|+|||||+|||||+...++. +..+.||+.|||+..+                            
T Consensus       151 ~~~~~~pLg~~Ll~al~dLLF~~gFTv~~~~~~~~-~~~~~iWe~GIg~~~~~~~~~~~~dsNR~EvLrLLLtl~S~~lY  229 (895)
T PF12722_consen  151 DDEQSPPLGERLLDALVDLLFCPGFTVPSSSSSPD-KVSYSIWEPGIGTNTSPPSPNKEHDSNRTEVLRLLLTLFSEPLY  229 (895)
T ss_pred             cccCCCCHHHHHHHHHHHHhCCCCCcCCCccCCCC-ccceeeccCccccCCCCCCCCHHHHHHHHHHHHHHHHHhchhhc
Confidence            34448899999999999999999999999983333 4455599999999811                            


Q ss_pred             --------------------------------------------------------------------------------
Q psy8934          57 --------------------------------------------------------------------------------   56 (129)
Q Consensus        57 --------------------------------------------------------------------------------   56 (129)
                                                                                                      
T Consensus       230 ~~~~~~~~~~~~l~~l~s~~~~~~~l~L~~SLlNt~~~y~p~~~~~~~lpY~~~~~~d~r~~lV~~slQlL~vlL~y~~~  309 (895)
T PF12722_consen  230 QPPSLSSTGNKFLTYLVSCTPRQLVLTLLCSLLNTVCRYDPSGNEEWGLPYNHLVFSDSREPLVTYSLQLLNVLLDYPPP  309 (895)
T ss_pred             CCCccCCCCCeeeeeeccCcchhhhHHHHHHHHHHHHhcCCCCccccccccccccccCcccHHHHHHHHHHHHheeCCCC
Confidence                                                                                            


Q ss_pred             ---CC----------CCchhHHHHHHHhccCchhHHHHHHHHHHHhhchhh------------cccCCCCccchhhHHHH
Q psy8934          57 ---KL----------GTQDNLFINYLSRIHRDEDFQFVLAGFSRLLNNPLL------------QTYLPNSTKKIEFHQEL  111 (129)
Q Consensus        57 ---~~----------~~~~N~FR~yLsrLHR~eDf~FIl~glsriL~~Pl~------------~syLP~s~k~i~~~~El  111 (129)
                         ..          .+++|+||+|||||||++||+||++||+|||++|++            ++|+|++++++.|++|+
T Consensus       310 ~~~~~~~~~~~~~~~~~~~N~~r~yl~~lhr~~D~~fi~~gl~~iL~~pl~~~~~~es~~f~~~~~lp~s~~~~~~~~e~  389 (895)
T PF12722_consen  310 SQTNSSFSSETNLTSSKPKNLFRNYLSKLHREEDFQFILDGLTRILNNPLQSAIEQESNPFSSSSYLPGSQKPSPWAQEL  389 (895)
T ss_pred             CCCccccccccCcCCCCcchHHHHHHhccCcHHHHHHHHHHHHHHHHhhhhhhhhccccccccccccccccccchHHHHH
Confidence               01          688999999999999999999999999999999999            58999999999999999


Q ss_pred             HHHHHHHhhccccccc
Q psy8934         112 LVLFWKMCDYNKHNKE  127 (129)
Q Consensus       112 lmL~Wellq~NKrFr~  127 (129)
                      +||||++|||||+|+.
T Consensus       390 l~l~W~l~~~Nk~F~~  405 (895)
T PF12722_consen  390 LMLFWELIQCNKRFRN  405 (895)
T ss_pred             HHHHHHHHhhCHHHHH
Confidence            9999999999999985

>KOG2226|consensus

Probab=99.96  E-value=2.2e-30  Score=234.29  Aligned_cols=126  Identities=44%  Similarity=0.723  Sum_probs=110.6

Q ss_pred             CCcccccccchHHHHHHHHHhhccCCCcccccCccc--------CcchhhHHHHHhhhccccC-----------------
Q psy8934           2 TPAEDVESVPLAQSLLNAICDLLFCPDFTVASNKKF--------NSRKKMDYILNCTLSFGGL-----------------   56 (129)
Q Consensus         2 ~~~~~~~~~pla~~l~~~l~dllf~~~~t~~~~~~~--------~~~~~~~~i~~~~v~~~~~-----------------   56 (129)
                      .|...+-.+|||.+|+++.+|||||||||++.-..+        ++-++|+|||++|||+...                 
T Consensus       122 lpk~~d~~~PL~~~llns~~dLlf~~dfTi~~~~~~~~~~~k~~~siesC~~IWEaGVg~~et~~~~~~~~~~R~EvLrL  201 (786)
T KOG2226|consen  122 LPKTVDDLKPLAASLLNSFSDLLFLPDFTITLCFQHNFTKIKELSSIESCEYIWEAGVGIPETPPKPAYDERHRTEVLRL  201 (786)
T ss_pred             CcCCCCccCchhHHHHHHHhhhhhccccchhhhhhcCcchhhhhcchhHHHHHHhcccCCCCCCCCchHHHHHHHHHHHH
Confidence            455556699999999999999999999999944333        2336999999999999800                 


Q ss_pred             --------------------------------------------------------------------------------
Q psy8934          57 --------------------------------------------------------------------------------   56 (129)
Q Consensus        57 --------------------------------------------------------------------------------   56 (129)
                                                                                                      
T Consensus       202 LL~lfSe~lY~rsdE~~ss~~~~~~s~ank~lvL~ll~SliNT~~~~~p~~~~~~yn~l~~sds~~sLve~~~qiLli~l  281 (786)
T KOG2226|consen  202 LLVLFSETLYDRSDELDSSVLNYIFSSANKRLVLPLLTSLINTVCRYDPVGWKNSYNQLLNSDSLESLVEYCLQILLILL  281 (786)
T ss_pred             HHHHhhHHHHhcccccCceeEEEEEEecCCceeehhhHHhhhhheeccccccccccccccccchhhhHHHHHHHHHHHhh
Confidence                                                                                            


Q ss_pred             -----------------CCCCchhHHHHHHHhccCchhHHHHHHHHHHHhhchhhcc--cCCCCccchhhHHHHHHHHHH
Q psy8934          57 -----------------KLGTQDNLFINYLSRIHRDEDFQFVLAGFSRLLNNPLLQT--YLPNSTKKIEFHQELLVLFWK  117 (129)
Q Consensus        57 -----------------~~~~~~N~FR~yLsrLHR~eDf~FIl~glsriL~~Pl~~s--yLP~s~k~i~~~~EllmL~We  117 (129)
                                       .+.-++|+|++|+||+||++||+||++||+|+|++|+.++  |+|+++|...||||+|+|+|+
T Consensus       282 Dh~~~e~t~~y~~~r~s~g~~~kN~f~~ylSrlhr~~DF~fil~gi~RLL~nPl~s~s~yi~~s~k~~~~~~E~Liflw~  361 (786)
T KOG2226|consen  282 DHRIKENTHLYQNGRSSEGQHIKNYFINYLSRLHRTEDFLFILKGITRLLSNPLKSESQYIPNSTKRKRCHPELLIFLWL  361 (786)
T ss_pred             ccccccCceeccCCcCCCccchhhHHHHHHHHhccchhHHHHHHHHHHHhcchhhcccccccccchhhhhhHHHHHHHHH
Confidence                             3455799999999999999999999999999999999865  999999999999999999999


Q ss_pred             Hhhccccccc
Q psy8934         118 MCDYNKHNKE  127 (129)
Q Consensus       118 llq~NKrFr~  127 (129)
                      +|++||||+.
T Consensus       362 ~i~yNkrF~~  371 (786)
T KOG2226|consen  362 LITYNKRFTD  371 (786)
T ss_pred             HHhccHHHHH
Confidence            9999999974

>PF09742 Dymeclin: Dyggve-Melchior-Clausen syndrome protein; InterPro: IPR019142 Dymeclin (Dyggve-Melchior-Clausen syndrome protein) contains a large number of leucine and isoleucine residues and a total of 17 repeated dileucine motifs

Probab=98.40  E-value=6.2e-08  Score=88.09  Aligned_cols=67  Identities=30%  Similarity=0.275  Sum_probs=56.4

Q ss_pred             chhHHHHHHHhccCchh--HHHHHHHHHHHhh--chhhcccCCCCccchhhHHHHHHHHHHHhhccccccc
Q psy8934          61 QDNLFINYLSRIHRDED--FQFVLAGFSRLLN--NPLLQTYLPNSTKKIEFHQELLVLFWKMCDYNKHNKE  127 (129)
Q Consensus        61 ~~N~FR~yLsrLHR~eD--f~FIl~glsriL~--~Pl~~syLP~s~k~i~~~~EllmL~Wellq~NKrFr~  127 (129)
                      ..|-||.++..+.+.++  ++++..|+.+...  .++..++|+++..+...++|.++|+|.+++.|++|+.
T Consensus       322 ~~Np~r~al~~~~d~~~~~~~~~~~~~~~~~~~~~~i~f~~L~~s~~~~~~~~~~~lLLY~LL~~N~~F~~  392 (678)
T PF09742_consen  322 KGNPYREALFSFSDIQDEDFDFDSSGISSSLVNSFKINFTALYNSLCKSLSHDELLLLLYKLLHRNPNFLN  392 (678)
T ss_pred             CCChHHHHHHhhhcchhccccccccccccccccceeecHHHHHHHHHHhhCCcchHHHHHHHHhcCHHHHH
Confidence            47888888777777765  8899999998888  4445678999988899999999999999999999974

It is characteristically about 700 residues long and present in plants and animals. In humans, mutations in the gene coding for this protein give rise to a disorder called Dyggve-Melchior-Clausen syndrome (DMC, MIM 223800), which is an autosomal-recessive disorder characterised by the association of spondylo-epi-metaphyseal dysplasia and mental retardation []. This entry also includes Hid1 (high-temperature-induced dauer-formation protein 1) from Caenorhabditis elegans which encodes a novel highly conserved putative transmembrane protein expressed in neurons []. It contains up to seven potential transmembrane domains separated by regions of low complexity. Functionally this protein might be involved in vesicle secretion or be an inter-cellular signalling protein or be a novel insulin receptor [].

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00