Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database
ID Alignment Graph Length
Definition
E-value Query 119
COG5279 521
COG5279, CYK3, Uncharacterized protein involved in
4e-07 smart00460 68
smart00460, TGc, Transglutaminase/protease-like ho
3e-06
>gnl|CDD|227604 COG5279, CYK3, Uncharacterized protein involved in cytokinesis, contains TGc (transglutaminase/protease-like) domain [Cell division and chromosome partitioning]
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Score = 46.9 bits (111), Expect = 4e-07
Identities = 22/98 (22%), Positives = 36/98 (36%), Gaps = 16/98 (16%)
Query: 6 AGLHCVVIKGYSKSAGYQPGVKFEDNRFRNSWNAVYVAGAWRFVQCNWGARHLVNAKEVP 65
G+ C +I+G+ KS P D ++WN V + + V WG
Sbjct: 226 LGIPCEIIEGFLKS----PIYYTRDININHAWNIVKIDNEYYLVDTTWGD---------- 271
Query: 66 KVGAKGKSDSLRYEYDDHYFLTDPREFIYEFFPLQPEW 103
+S + + YFL P + I P + +W
Sbjct: 272 --PIHPDQNSKSSKINHSYFLLAPNQMIATHVPEKDDW 307
>gnl|CDD|214673 smart00460, TGc, Transglutaminase/protease-like homologues
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Score = 41.2 bits (97), Expect = 3e-06
Identities = 12/49 (24%), Positives = 20/49 (40%), Gaps = 2/49 (4%)
Query: 5 YAGLHCVVIKGYSKSAGYQPGVKFEDNRFRNSWNAVYVAGAWRFVQCNW 53
G+ V+ GY K+ G++ ++W VY+ G W V
Sbjct: 22 SLGIPARVVSGYLKAPDTIGGLR--SIWEAHAWAEVYLEGGWVPVDPTP 68
Transglutaminases are enzymes that establish covalent links between proteins. A subset of transglutaminase homologues appear to catalyse the reverse reaction, the hydrolysis of peptide bonds. Proteins with this domain are both extracellular and intracellular, and it is likely that the eukaryotic intracellular proteins are involved in signalling events. Length = 68
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
ID Alignment Graph Length
Definition
Probability Query
119
COG5279 521
CYK3 Uncharacterized protein involved in cytokines
99.93 smart00460 68
TGc Transglutaminase/protease-like homologues. Tra
99.5 KOG4575|consensus 874
99.43 PF01841 113
Transglut_core: Transglutaminase-like superfamily;
99.05 COG1305 319
Transglutaminase-like enzymes, putative cysteine p
98.43 KOG4575|consensus 874
97.95 PF04473 153
DUF553: Transglutaminase-like domain; InterPro: IP
96.92 PF14381 204
EDR1: Ethylene-responsive protein kinase Le-CTR1
96.3 PF00797 240
Acetyltransf_2: N-acetyltransferase; InterPro: IPR
94.18 COG3012 151
Uncharacterized protein conserved in bacteria [Fun
92.41 PF14402 313
7TM_transglut: 7 transmembrane helices usually fus
91.9 KOG0909|consensus 500
90.65 PF13471 117
Transglut_core3: Transglutaminase-like superfamily
86.47 PF01473 19
CW_binding_1: Putative cell wall binding repeat; I
85.57 PRK15047 281
N-hydroxyarylamine O-acetyltransferase; Provisiona
85.47
>COG5279 CYK3 Uncharacterized protein involved in cytokinesis, contains TGc (transglutaminase/protease-like) domain [Cell division and chromosome partitioning]
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Probab=99.93 E-value=2.1e-26 Score=192.81 Aligned_cols=99 Identities=22% Similarity=0.456 Sum_probs=83.3
Q ss_pred CcccccCCcEEEEEEEeCCCCCCCCCcCCCCCCCceEEEEEECCeEEEEeccCCCccccCCccccccccCCCCCCccccc
Q psy9431 1 MFESYAGLHCVVIKGYSKSAGYQPGVKFEDNRFRNSWNAVYVAGAWRFVQCNWGARHLVNAKEVPKVGAKGKSDSLRYEY 80 (119)
Q Consensus 1 ~lc~~aGi~~~~V~G~~k~~~~~pg~~~~~~~~~HaWN~V~ldg~W~liD~Twgag~~~~~~~~p~~~~~~~~~~f~~~~ 80 (119)
+||.++||+|++|.||+|+.-+ .+.++ ..|||||+|+||++||+||+|||++...+.+ ..+ ...
T Consensus 221 ~lcn~lgIp~~iIegf~k~~~~-~~~~~---~iNHaWN~VkiD~~yy~VDtTwgdPI~~d~~----------~~~--~~~ 284 (521)
T COG5279 221 ELCNALGIPCEIIEGFLKSPIY-YTRDI---NINHAWNIVKIDNEYYLVDTTWGDPIHPDQN----------SKS--SKI 284 (521)
T ss_pred HHHHhcCCceEEEeeccccccc-ccCCc---cccceeeEEEECCeEEEEeeecCCCCccccc----------ccc--ccc
Confidence 5999999999999999999832 23333 4799999999999999999999999765421 111 367
Q ss_pred CccccccCchhchhhccCCCCCcccccCCCccccC
Q psy9431 81 DDHYFLTDPREFIYEFFPLQPEWRTHVYQASVLTT 115 (119)
Q Consensus 81 ~~~YFl~~P~~fi~tH~P~d~~wQll~~pis~~~~ 115 (119)
+.+||++.|.++|.||+|..++||++.+|++.+++
T Consensus 285 n~~YF~lap~qMi~tH~p~k~~wq~~~~~~d~~~~ 319 (521)
T COG5279 285 NHSYFLLAPNQMIATHVPEKDDWQFIKPDLDMPIV 319 (521)
T ss_pred CchhccCChHHHhhhcCCCcchhhccCCchhhhhh
Confidence 89999999999999999999999999999997654
>smart00460 TGc Transglutaminase/protease-like homologues
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Probab=99.50 E-value=5.1e-14 Score=87.97 Aligned_cols=50 Identities=24% Similarity=0.434 Sum_probs=41.9
Q ss_pred cccccCCcEEEEEEEeCCCCCCCCCcCCCCCCCceEEEEEECCeEEEEeccC
Q psy9431 2 FESYAGLHCVVIKGYSKSAGYQPGVKFEDNRFRNSWNAVYVAGAWRFVQCNW 53 (119)
Q Consensus 2 lc~~aGi~~~~V~G~~k~~~~~pg~~~~~~~~~HaWN~V~ldg~W~liD~Tw 53 (119)
|||++||+|++|.|+.++.+...+.. ....+|+|++|+++|+|+.+|+||
T Consensus 19 llr~~GIpar~v~g~~~~~~~~~~~~--~~~~~H~W~ev~~~~~W~~~D~~~ 68 (68)
T smart00460 19 LLRSLGIPARVVSGYLKAPDTIGGLR--SIWEAHAWAEVYLEGGWVPVDPTP 68 (68)
T ss_pred HHHHCCCCeEEEeeeecCCCCCcccc--cCCCcEEEEEEEECCCeEEEeCCC
Confidence 79999999999999999875433221 124799999999999999999998
Transglutaminases are enzymes that establish covalent links between proteins. A subset of transglutaminase homologues appear to catalyse the reverse reaction, the hydrolysis of peptide bonds. Proteins with this domain are both extracellular and intracellular, and it is likely that the eukaryotic intracellular proteins are involved in signalling events.
>KOG4575|consensus
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Probab=99.43 E-value=2.1e-14 Score=123.64 Aligned_cols=101 Identities=22% Similarity=0.187 Sum_probs=77.1
Q ss_pred cccccCCcEEEEEEEeCCCCCCCCCcCCCCCCCceEEEEEECCeEEEEeccCCCccccCCccccccccCCCCCCcccccC
Q psy9431 2 FESYAGLHCVVIKGYSKSAGYQPGVKFEDNRFRNSWNAVYVAGAWRFVQCNWGARHLVNAKEVPKVGAKGKSDSLRYEYD 81 (119)
Q Consensus 2 lc~~aGi~~~~V~G~~k~~~~~pg~~~~~~~~~HaWN~V~ldg~W~liD~Twgag~~~~~~~~p~~~~~~~~~~f~~~~~ 81 (119)
|...+||.|+||.||.|.+.... -. .+.||+|+.|++|.+|++||+..++.. + .+++. ...+.. ..+
T Consensus 527 ~~~sLdlwCEvi~gflK~P~~i~-~~---fkyNh~w~~~~~d~e~r~iD~s~~~s~---p-ih~~~----~~~s~~-~~~ 593 (874)
T KOG4575|consen 527 RPLSLDLWCEVILGFLKIPFVIS-LF---FKYNHSWIDNKLDEETRYIDKSGAASI---P-IHLPP----KGDSLI-FHY 593 (874)
T ss_pred hhhhcchhHHHHHhhhcCcccee-ee---eecchhhhhhhccceeEEEeecccccc---c-cccCc----CCcchh-ccc
Confidence 56789999999999999874321 11 246999999999999999999874431 1 23321 222322 335
Q ss_pred ccccccCchhchhhccCCCCCcccccCCCccccC
Q psy9431 82 DHYFLTDPREFIYEFFPLQPEWRTHVYQASVLTT 115 (119)
Q Consensus 82 ~~YFl~~P~~fi~tH~P~d~~wQll~~pis~~~~ 115 (119)
++|||+.|+|.|+||+|++|..|++.+-|+.+..
T Consensus 594 n~yFlm~P~E~i~Th~penp~~qfImpsv~~~~~ 627 (874)
T KOG4575|consen 594 NLYFLMSPEENIITHMPENPLKQFIMPSVTEDVC 627 (874)
T ss_pred cceeecChhhheecCCCCchhhhhccccccchhe
Confidence 6899999999999999999999999999987653
>PF01841 Transglut_core: Transglutaminase-like superfamily; InterPro: IPR002931 This domain is found in many proteins known to have transglutaminase activity, i
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Probab=99.05 E-value=1.9e-10 Score=77.51 Aligned_cols=50 Identities=20% Similarity=0.420 Sum_probs=36.3
Q ss_pred CcccccCCcEEEEEEEeCCCCCCCCCcCCCCCCCceEEEEEE-CCeEEEEec
Q psy9431 1 MFESYAGLHCVVIKGYSKSAGYQPGVKFEDNRFRNSWNAVYV-AGAWRFVQC 51 (119)
Q Consensus 1 ~lc~~aGi~~~~V~G~~k~~~~~pg~~~~~~~~~HaWN~V~l-dg~W~liD~ 51 (119)
.|||++||+|++|.|+.++.+........ ....|+||+|++ +|+|+.+|+
T Consensus 63 allr~~Gipar~v~g~~~~~~~~~~~~~~-~~~~H~w~ev~~~~~~W~~~Dp 113 (113)
T PF01841_consen 63 ALLRALGIPARVVSGYVKGPDPDGDYSVD-GNDNHAWVEVYLPGGGWIPLDP 113 (113)
T ss_dssp HHHHHHT--EEEEEEEEEECSSTTCTSTS-SEEEEEEEEEEETTTEEEEEET
T ss_pred HHHhhCCCceEEEEEEcCCccccccccCC-CCCCEEEEEEEEcCCcEEEcCC
Confidence 38999999999999999975321111111 236899999999 899999996
e. which cross-link proteins through an acyl-transfer reaction between the gamma-carboxamide group of peptide-bound glutamine and the epsilon-amino group of peptide-bound lysine, resulting in a epsilon-(gamma-glutamyl)lysine isopeptide bond. Tranglutaminases have been found in a diverse range of species, from bacteria through to mammals. The enzymes require calcium binding and their activity leads to post-translational modification of proteins through acyl-transfer reactions, involving peptidyl glutamine residues as acyl donors and a variety of primary amines as acyl acceptors, with the generation of proteinase resistant isopeptide bonds []. Sequence conservation in this superfamily primarily involves three motifs that centre around conserved cysteine, histidine, and aspartate residues that form the catalytic triad in the structurally characterised transglutaminase, the human blood clotting factor XIIIa' []. On the basis of the experimentally demonstrated activity of the Methanobacterium phage psiM2 pseudomurein endoisopeptidase [], it is proposed that many, if not all, microbial homologs of the transglutaminases are proteases and that the eukaryotic transglutaminases have evolved from an ancestral protease []. A subunit of plasma Factor XIII revealed that each Factor XIIIA subunit is composed of four domains (termed N-terminal beta-sandwich, core domain (containing the catalytic and the regulatory sites), and C-terminal beta-barrels 1 and 2) and that two monomers assemble into the native dimer through the surfaces in domains 1 and 2, in opposite orientation. This organisation in four domains is highly conserved during evolution among transglutaminase isoforms [].; PDB: 2F4M_A 2F4O_A 1GGY_B 1FIE_B 1GGU_B 1GGT_B 1F13_A 1QRK_B 1EVU_A 1EX0_B ....
>COG1305 Transglutaminase-like enzymes, putative cysteine proteases [Amino acid transport and metabolism]
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Probab=98.43 E-value=2.2e-07 Score=71.42 Aligned_cols=57 Identities=19% Similarity=0.312 Sum_probs=43.3
Q ss_pred CcccccCCcEEEEEEEeCCCCCCCCCc-CCCCCCCceEEEEEECC-eEEEEeccCCCcc
Q psy9431 1 MFESYAGLHCVVIKGYSKSAGYQPGVK-FEDNRFRNSWNAVYVAG-AWRFVQCNWGARH 57 (119)
Q Consensus 1 ~lc~~aGi~~~~V~G~~k~~~~~pg~~-~~~~~~~HaWN~V~ldg-~W~liD~Twgag~ 57 (119)
.|||++||+|++|+||.-+.....+.. .......|||.+|+++| .|+-+|+|-+...
T Consensus 206 al~Ra~GIpAR~V~Gy~~~~~~~~~~~~~~~~~~~Haw~ev~~~~~gW~~~Dpt~~~~~ 264 (319)
T COG1305 206 ALLRAAGIPARYVSGYLGAEVEPLSGRPLVRNDDAHAWAEVYLPGRGWVPLDPTNGLLA 264 (319)
T ss_pred HHHHHcCCcceeeeccccCCCCcccccccccCcccceeeeeecCCCccEeecCCCCCcc
Confidence 389999999999999987763222111 12234689999999999 5999999988753
>KOG4575|consensus
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Probab=97.95 E-value=1.1e-06 Score=76.75 Aligned_cols=105 Identities=57% Similarity=1.030 Sum_probs=73.7
Q ss_pred Cc--EEEEEEEe--CCCC-CCCCCc-CCCCC------CCceEEEEEECC----eEEEEeccCCCccccCCccccccccCC
Q psy9431 8 LH--CVVIKGYS--KSAG-YQPGVK-FEDNR------FRNSWNAVYVAG----AWRFVQCNWGARHLVNAKEVPKVGAKG 71 (119)
Q Consensus 8 i~--~~~V~G~~--k~~~-~~pg~~-~~~~~------~~HaWN~V~ldg----~W~liD~Twgag~~~~~~~~p~~~~~~ 71 (119)
++ |.++.|+. +..| +.||+- +...+ ..-.||+|.+|| .|+++-++|+|+.+....+ .-|+.+.
T Consensus 407 lhvy~~v~~g~~ci~v~gd~~Pgq~sv~~~~~Nmnfsa~~tw~r~i~dgrvqvSw~~~q~n~~Ar~~~tal~-~~r~~~i 485 (874)
T KOG4575|consen 407 LHVYCVVIKGFSCIKVAGDYQPGQYSVDDHRFNMNFSARNTWNRVILDGRVQVSWRFVQCNWGARHLVTALD-GSREAKI 485 (874)
T ss_pred ccchhhhhcccchhhhccCCCceeEeccccccccchhhhhchheeeecCcccccHHHHhhccCcchhhhHhh-hccceee
Confidence 55 77888877 5554 667622 32222 245899999999 8999999999995533211 0111111
Q ss_pred CCCCcccccCccccccCc---hhchh--hccCCCCCcccccCCCccc
Q psy9431 72 KSDSLRYEYDDHYFLTDP---REFIY--EFFPLQPEWRTHVYQASVL 113 (119)
Q Consensus 72 ~~~~f~~~~~~~YFl~~P---~~fi~--tH~P~d~~wQll~~pis~~ 113 (119)
.-...+...|+.||.+++ ++||+ .-+|.+-.|++.+.|.|+.
T Consensus 486 ~~~E~~~~tdd~~~~~e~rtse~~iyeg~~tP~e~awl~k~~~~sLd 532 (874)
T KOG4575|consen 486 DGNELRYETDDHYFMTESRTSEEFIYEGEFTPSEHAWLLKPRPLSLD 532 (874)
T ss_pred eeeeeeEeeccccccccccchhhheeccccChhHHHHHhhhhhhhcc
Confidence 122234678999999999 89999 7889999999999999883
>PF04473 DUF553: Transglutaminase-like domain; InterPro: IPR007562 This entry represents a transglutaminase-like domain found in a family of uncharacterised archaeal proteins that had previously been called DUF553 and UPF0252
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Probab=96.92 E-value=0.0022 Score=47.24 Aligned_cols=42 Identities=14% Similarity=0.071 Sum_probs=30.6
Q ss_pred cccccCCcEEEEEEEeCCCCCCCCCcCCCCCCCceEEEEEECCeEEEEeccCC
Q psy9431 2 FESYAGLHCVVIKGYSKSAGYQPGVKFEDNRFRNSWNAVYVAGAWRFVQCNWG 54 (119)
Q Consensus 2 lc~~aGi~~~~V~G~~k~~~~~pg~~~~~~~~~HaWN~V~ldg~W~liD~Twg 54 (119)
|+-.+|+....|.+..-.. .. .|||++|+|||+||++|.+.-
T Consensus 88 lLl~~g~~~~yi~~~~~~~----------~~-~Haa~aV~ing~~yvlDq~~p 129 (153)
T PF04473_consen 88 LLLNMGYSPVYILHIEFDN----------DP-GHAAVAVKINGKYYVLDQHLP 129 (153)
T ss_pred HHHHCCCCceEEEEEecCC----------CC-CeEEEEEEECCEEEEEeCCCC
Confidence 4556788777666655221 12 599999999999999998753
>PF14381 EDR1: Ethylene-responsive protein kinase Le-CTR1
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Probab=96.30 E-value=0.0072 Score=46.40 Aligned_cols=46 Identities=17% Similarity=0.164 Sum_probs=36.4
Q ss_pred cccccCCcEEEEEEEeCCCCCCCCCcCCCCCCCceEEEEEEC-CeEEEEeccCCCcc
Q psy9431 2 FESYAGLHCVVIKGYSKSAGYQPGVKFEDNRFRNSWNAVYVA-GAWRFVQCNWGARH 57 (119)
Q Consensus 2 lc~~aGi~~~~V~G~~k~~~~~pg~~~~~~~~~HaWN~V~ld-g~W~liD~Twgag~ 57 (119)
||+..||+|++|.|.-.... ...||||.|+++ ++=|+||..-.=|.
T Consensus 155 LAD~iglpCrLvrG~~y~g~----------~~~~a~~~V~~~~~~eyiVDLm~~PG~ 201 (204)
T PF14381_consen 155 LADRIGLPCRLVRGCYYCGW----------DDDDASNLVKFDDGREYIVDLMGAPGQ 201 (204)
T ss_pred HHHhcCCCceEEeeccCCcc----------CCCCceEEEEcCCCcEEEEEcCCCCCC
Confidence 79999999999999754321 147999999997 67799998766554
>PF00797 Acetyltransf_2: N-acetyltransferase; InterPro: IPR001447 Arylamine N-acetyltransferase (NAT) is a cytosolic enzyme of approximately 30 kDa
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Probab=94.18 E-value=0.14 Score=38.92 Aligned_cols=51 Identities=14% Similarity=0.124 Sum_probs=38.8
Q ss_pred cccccCCcEEEEEEEeCCCCCCCCCcCCCCCCCceEEEEEECCeEEEEeccCCCc
Q psy9431 2 FESYAGLHCVVIKGYSKSAGYQPGVKFEDNRFRNSWNAVYVAGAWRFVQCNWGAR 56 (119)
Q Consensus 2 lc~~aGi~~~~V~G~~k~~~~~pg~~~~~~~~~HaWN~V~ldg~W~liD~Twgag 56 (119)
+.+.+|.++..+.|-....+.... . ....|.=+.|.+||+.|+||+.+|++
T Consensus 59 lL~~lGf~v~~~~arv~~~~~~~~--~--~~~~H~~liV~~~~~~ylvDvGfG~~ 109 (240)
T PF00797_consen 59 LLRELGFDVTLVSARVYSPGGPDY--W--PPRTHLVLIVTLDGERYLVDVGFGGP 109 (240)
T ss_dssp HHHHCT-EEEEEEEEEETTTTTCC--S--SSEEEEEEEEEETTEEEEE-SSSTTC
T ss_pred HHHHCCCeEEEEEEEEEeCCCCCC--C--CCCceEEEEEEECCEEEEEeccCCCc
Confidence 457899999999998877632210 1 23589999999999999999999998
It facilitates the transfer of an acetyl group from acetyl coenzyme A on to a wide range of arylamine, N-hydroxyarylamines and hydrazines. Acetylation of these compounds generally results in inactivation. NAT is found in many species from Mycobacteria (Mycobacterium tuberculosis, Mycobacterium smegmatis etc) to Homo sapiens (Human). It was the first enzyme to be observed to have polymorphic activity amongst human individuals. NAT is responsible for the inactivation of Isoniazid (a drug used to treat tuberculosis) in humans. The NAT protein has also been shown to be involved in the breakdown of folic acid. NAT catalyses the reaction: Acetyl-coA + arylamine = coA + N-acetylarylamine NAT is the target of a common genetic polymorphism of clinical relevance in humans. The N-acetylation polymorphism is determined by low or high NAT activity in liver. NAT has been implicated in the action and toxicity of amine-containing drugs, and in the susceptibility to cancer and systematic lupus erythematosus. Two highly similar human genes for NAT, termed NAT1 and NAT2, encode genetically invariant and variant NAT proteins, respectively. ; GO: 0016407 acetyltransferase activity, 0008152 metabolic process; PDB: 1W6F_A 1W5R_A 1GX3_D 2PQT_A 2IJA_A 1W4T_A 2BSZ_B 3D9W_B 3LTW_A 3LNB_A ....
>COG3012 Uncharacterized protein conserved in bacteria [Function unknown]
Back Show alignment and domain information
Probab=92.41 E-value=0.088 Score=38.67 Aligned_cols=16 Identities=19% Similarity=0.493 Sum_probs=14.4
Q ss_pred EEEECCeEEEEeccCC
Q psy9431 39 AVYVAGAWRFVQCNWG 54 (119)
Q Consensus 39 ~V~ldg~W~liD~Twg 54 (119)
-|+|||+||+||.|-.
T Consensus 115 Fvk~ngrWyyiDgtv~ 130 (151)
T COG3012 115 FVKINGRWYYIDGTVP 130 (151)
T ss_pred heEECCEEEEECCCCC
Confidence 4899999999999876
>PF14402 7TM_transglut: 7 transmembrane helices usually fused to an inactive transglutaminase
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Probab=91.90 E-value=0.17 Score=41.26 Aligned_cols=48 Identities=21% Similarity=0.470 Sum_probs=37.9
Q ss_pred cccccCCcEEEEEEEeCCCCCCCCCcCCCCCCCceEEEEEECCeEEEEeccCCCc
Q psy9431 2 FESYAGLHCVVIKGYSKSAGYQPGVKFEDNRFRNSWNAVYVAGAWRFVQCNWGAR 56 (119)
Q Consensus 2 lc~~aGi~~~~V~G~~k~~~~~pg~~~~~~~~~HaWN~V~ldg~W~liD~Twgag 56 (119)
|++.+|||+++|.|.-=..+- . ...-+-|.+|+-+++|.++|+.=|..
T Consensus 6 lL~~a~Ipar~v~gl~Led~r----r---~q~l~~~lev~~~~~W~~f~p~tg~~ 53 (313)
T PF14402_consen 6 LLAMAGIPARVVHGLKLEDGR----R---RQSLEPWLEVFNGGKWVLFNPRTGEQ 53 (313)
T ss_pred HHHhCCCCccEeeeEEecCCc----c---ccCcHhHHheeeCCeEEEECCCCCCc
Confidence 678999999999997654321 1 13568999999999999999976664
>KOG0909|consensus
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Probab=90.65 E-value=0.075 Score=45.31 Aligned_cols=39 Identities=23% Similarity=0.346 Sum_probs=32.3
Q ss_pred CcccccCCcEEEEEEEeCCCCCCCCCcCCCCCCCceEEEEEEC--CeEEEEeccCCC
Q psy9431 1 MFESYAGLHCVVIKGYSKSAGYQPGVKFEDNRFRNSWNAVYVA--GAWRFVQCNWGA 55 (119)
Q Consensus 1 ~lc~~aGi~~~~V~G~~k~~~~~pg~~~~~~~~~HaWN~V~ld--g~W~liD~Twga 55 (119)
.+|+++|+.+++|=- ...|-|++|+.+ .+|..||++=+.
T Consensus 232 llcralg~daR~i~d----------------~tDHVWtEvYS~~qqRW~HvDpcE~v 272 (500)
T KOG0909|consen 232 LLCRALGLDARYIWD----------------RTDHVWTEVYSNAQQRWVHVDPCENV 272 (500)
T ss_pred HHHHHcCCcceEEee----------------cCcchhHHhhhhhhheeEeecccccc
Confidence 379999999999832 247999999998 689999997554
>PF13471 Transglut_core3: Transglutaminase-like superfamily
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Probab=86.47 E-value=0.92 Score=31.03 Aligned_cols=34 Identities=18% Similarity=0.381 Sum_probs=27.0
Q ss_pred cccccCCcEEEEEEEeCCCCCCCCCcCCCCCCCceEEEEEECCeE
Q psy9431 2 FESYAGLHCVVIKGYSKSAGYQPGVKFEDNRFRNSWNAVYVAGAW 46 (119)
Q Consensus 2 lc~~aGi~~~~V~G~~k~~~~~pg~~~~~~~~~HaWN~V~ldg~W 46 (119)
|++..||++.++.|..|..+ ++ ..|||-+ .||+=
T Consensus 68 ~L~~~gi~~~l~iGv~~~~~-----~~----~aHAWve--~~g~~ 101 (117)
T PF13471_consen 68 LLRRRGIPATLVIGVRKDDD-----PF----AAHAWVE--CGGRV 101 (117)
T ss_pred HHHhcCCCcEEEEEEeeCCC-----Cc----eEEEEEE--ECCEE
Confidence 67888999999999999863 33 4899987 56553
>PF01473 CW_binding_1: Putative cell wall binding repeat; InterPro: IPR018337 The cell wall-binding repeat (CW) is an about 20 amino acid residue module, essentially found in two bacterial Gram-positive protein families; the choline binding proteins and glucosyltransferases (2
Back Show alignment and domain information
Probab=85.57 E-value=0.79 Score=21.87 Aligned_cols=12 Identities=25% Similarity=0.650 Sum_probs=9.8
Q ss_pred EEECCeEEEEec
Q psy9431 40 VYVAGAWRFVQC 51 (119)
Q Consensus 40 V~ldg~W~liD~ 51 (119)
|+++|+||.+|.
T Consensus 4 ~~~~~~wYy~~~ 15 (19)
T PF01473_consen 4 VQDNGNWYYFDS 15 (19)
T ss_dssp EEETTEEEEETT
T ss_pred EEECCEEEEeCC
Confidence 567899999975
4.1.5 from EC). In choline-binding proteins cell wall binding repeats bind to choline moieties of both teichoic and lipoteichoic acids, two components peculiar to the cell surface of Gram-positive bacteria [, ]. In glucosyltransferases the region spanning the CW repeats is a glucan binding domain []. Several crystal structures of CW have been solved [, ]. In the choline binding protein LytA, the repeats adopt a solenoid fold consisting exclusively of beta-hairpins that stack to form a left-handed superhelix with a boomerang-like shape. The choline groups bind between beta-hairpin 'steps' of the superhelix []. In Cpl-1 CW repeats assemble in two sub-domains: an N-terminal superhelical moiety similar to the LytA one and a C-terminal beta-sheet involved in interactions with the lysozyme domain. Choline is bound between repeats 1 and 2, and, 2 and 3 of the superhelical sub-domain []. Some proteins known to contain cell-wall binding repeats include: Pneumococcal N-acetylmuramoyl-L-alanine amidase (autolysin, lytA) (3.5.1.28 from EC). It is a surface-exposed enzyme that rules the self-destruction of pneumococcal cells through degradation of their peptidoglycan backbone. It mediates the release of toxic substances that damage the host tissues. Pneumococcal endo-beta-N-acetylglucosaminidase (lytB) (3.2.1.96 from EC). It plays an important role in cell wall degradation and cell separation. Pneumococcal teichoic acid phosphorylcholine esterase (pce or cbpE), a cell wall hydrolase important for cellular adhesion and colonisation. Lactobacillales glucosyltransferase. It catalyses the transfer of glucosyl units from the cleavage of sucrose to a growing chain of glucan. Clostridium difficile toxin A (tcdA) and toxin B (tcdb). They are the causative agents of the antibiotic-associated pseudomembranous colitis. They are intracellular acting toxins that reach their targets after receptor-mediated endocytosis. Clostridium acetobutylicum cspA protein. Siphoviridae bacteriophages N-acetylmuramoyl-L-alanine amidase. It lyses the bacterial host cell wall. Podoviridae lysozyme protein (cpl-1). It is capable of digesting the pneumococcal cell wall. The cell wall binding repeats are also known as the choline-binding repeats (ChBr) or the choline-binding domain (ChBD). ; PDB: 1GVM_C 2BML_B 1HCX_A 1OBA_A 1H09_A 2J8F_A 2IXU_A 2J8G_A 2IXV_A 2X8O_A ....
>PRK15047 N-hydroxyarylamine O-acetyltransferase; Provisional
Back Show alignment and domain information
Probab=85.47 E-value=2.9 Score=33.39 Aligned_cols=50 Identities=12% Similarity=0.127 Sum_probs=37.9
Q ss_pred cccccCCcEEEEEEEeCCCCCCCCCcCCCCCCCceEEEEEECCeEEEEeccCCCc
Q psy9431 2 FESYAGLHCVVIKGYSKSAGYQPGVKFEDNRFRNSWNAVYVAGAWRFVQCNWGAR 56 (119)
Q Consensus 2 lc~~aGi~~~~V~G~~k~~~~~pg~~~~~~~~~HaWN~V~ldg~W~liD~Twgag 56 (119)
+.+++|..+..+.|-....+. ++ . ....|.=+.|.|||+-||+|+-.|+.
T Consensus 79 ~L~~LGF~v~~~~arV~~~~~-~~--~--~~~tH~~l~V~i~~~~yLvDVGFG~~ 128 (281)
T PRK15047 79 VLRELGFNVRSLLGRVVLSNP-PA--L--PPRTHRLLLVELEGEKWIADVGFGGQ 128 (281)
T ss_pred HHHHcCCcEEEEEEEEEecCC-CC--C--CCcCcEEEEEEECCeeEEEEecCCCC
Confidence 457889999998888764311 11 1 12489999999999999999999964
Homologous Structure Templates
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
ID Alignment Graph Length
Definition
Probability Query 119
3isr_A 293
Transglutaminase-like enzymes, putative cysteine;
99.21 2f4m_A 295
Peptide N-glycanase; glycoproteins, ubiquitin-depe
98.71 3kd4_A 506
Putative protease; structural genomics, joint cent
98.51 1vjj_A 692
Protein-glutamine glutamyltransferase E; transglut
98.39 2q3z_A 687
Transglutaminase 2; transglutaminase 2, tissue tra
98.26 1g0d_A 695
Protein-glutamine gamma-glutamyltransferase; tissu
98.24 1ex0_A 731
Coagulation factor XIII A chain; transglutaminase,
98.08 1x3z_A 335
Peptide: N-glycanase; hydrolase-hydrolase inhibito
97.75 1e2t_A 284
NAT, N-hydroxyarylamine O-acetyltransferase; acety
93.01 2bsz_A 278
Arylamine N-acetyltransferase 1; acyltransferase,
92.18 2qsf_A 533
RAD4, DNA repair protein RAD4; alpha-beta structur
92.07 2ija_A 295
Arylamine N-acetyltransferase 1; arylamide acetyla
90.41 1w4t_A 299
Arylamine N-acetyltransferase; 5- aminosalicylic a
90.23 3lnb_A 309
N-acetyltransferase family protein; arylamine N-ac
89.46 2vfb_A 280
Arylamine N-acetyltransferase; NAT, acetyl COA, my
86.29 1w5r_A 278
Arylamine N-acetyltransferase; acyltransferase; 1.
85.42 3d9w_A 293
Putative acetyltransferase; arylamine N-acetyltran
83.46
>3isr_A Transglutaminase-like enzymes, putative cysteine; protease, hutchinsoni MCSG, structural genomics; 1.90A {Cytophaga hutchinsonii}
Back Hide alignment and structure
Probab=99.21 E-value=1.2e-11 Score=97.45 Aligned_cols=46 Identities=11% Similarity=0.161 Sum_probs=40.8
Q ss_pred cccccCCcEEEEEEEeCCCCCCCCCcCCCCCCCceEEEEEECCeEEEEeccCCCc
Q psy9431 2 FESYAGLHCVVIKGYSKSAGYQPGVKFEDNRFRNSWNAVYVAGAWRFVQCNWGAR 56 (119)
Q Consensus 2 lc~~aGi~~~~V~G~~k~~~~~pg~~~~~~~~~HaWN~V~ldg~W~liD~Twgag 56 (119)
|||++||+|++|+||..+.+ ....|||++|+++|+|+.+|+||+..
T Consensus 191 l~Ra~GIPAR~VsGy~~~~~---------~~~~HAW~Evyl~ggWv~~DpT~~~~ 236 (293)
T 3isr_A 191 LCRALSIPARYFTGYAFKLN---------PPDFHACFEAYIGGNWIIFDATRLVP 236 (293)
T ss_dssp HHHHTTCCEEEEEEEETTCS---------SCCEEEEEEEEETTEEEEECTTCCSC
T ss_pred HHHHCCCCEEEEEEECCCCC---------CCCeEEEEEEEECCcEEEEECCCCCC
Confidence 89999999999999997642 13589999999999999999999874
>2f4m_A Peptide N-glycanase; glycoproteins, ubiquitin-dependent protein degradation, NUCL excision repair, peptide:N-glycanase; 1.85A {Mus musculus} SCOP: d.3.1.4 PDB: 2f4o_A*
Back Show alignment and structure
Probab=98.71 E-value=9.2e-09 Score=81.46 Aligned_cols=39 Identities=15% Similarity=0.338 Sum_probs=35.7
Q ss_pred CcccccCCcEEEEEEEeCCCCCCCCCcCCCCCCCceEEEEEECC--eEEEEeccCCC
Q psy9431 1 MFESYAGLHCVVIKGYSKSAGYQPGVKFEDNRFRNSWNAVYVAG--AWRFVQCNWGA 55 (119)
Q Consensus 1 ~lc~~aGi~~~~V~G~~k~~~~~pg~~~~~~~~~HaWN~V~ldg--~W~liD~Twga 55 (119)
.|||++||+|++|+|| ..|||++|+++| .|+.+|+|.+.
T Consensus 152 al~Ra~GIpAR~V~Gy----------------~~HaW~Evy~~g~~gWv~~Dpt~~~ 192 (295)
T 2f4m_A 152 LCCRALGFEARYVWDY----------------TDHVWTEVYSPSQQRWLHCDACEDV 192 (295)
T ss_dssp HHHHHTTCCEEEEEET----------------TTEEEEEEEETTTTEEEEEETTTTE
T ss_pred HHHHHCCCCEEEEcCC----------------CCEEEEEEEECCCCeEEEEeCCcCc
Confidence 3899999999999998 269999999998 99999999875
>3kd4_A Putative protease; structural genomics, joint center for STR genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 2.00A {Parabacteroides distasonis atcc 8503}
Back Show alignment and structure
Probab=98.51 E-value=9.8e-08 Score=79.58 Aligned_cols=53 Identities=11% Similarity=0.093 Sum_probs=42.2
Q ss_pred CcccccCCcEEEEEEEeCCCCCCCCCcCCCCCCCceEEEEEECCeEEEEeccCCCc
Q psy9431 1 MFESYAGLHCVVIKGYSKSAGYQPGVKFEDNRFRNSWNAVYVAGAWRFVQCNWGAR 56 (119)
Q Consensus 1 ~lc~~aGi~~~~V~G~~k~~~~~pg~~~~~~~~~HaWN~V~ldg~W~liD~Twgag 56 (119)
.|||++||+|+.|.++.+..|... ..++ ..||+|.+|++||+||++|+|--++
T Consensus 296 AllRa~GIpA~~v~~~t~~~~~~~-~~lp--~~nh~i~~v~~~g~~y~lDat~~~~ 348 (506)
T 3kd4_A 296 VMLNAAGIPSEVLAVYPGHLDTDA-CGLA--AIQTLAVKATVDGKDQYLSASPLTN 348 (506)
T ss_dssp HHHHHTTCCEEEEEEEETTSCGGG-CCST--TCCEEEEEEEETTEEEEESSSCHHH
T ss_pred HHHHHCCCCcEEEEEEcCCCCCcc-CCCC--CCCEEEEEEEECCEEEEEecCCccc
Confidence 389999999999999998776321 1222 2499999999999999999986554
>1vjj_A Protein-glutamine glutamyltransferase E; transglutaminase 3, X-RAY crystallography, metalloenzyme, calcium ION; HET: GDP; 1.90A {Homo sapiens} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4 PDB: 1sgx_A* 1l9m_A 1l9n_A* 1nud_A 1nuf_A 1nug_A 1rle_A*
Back Show alignment and structure
Probab=98.39 E-value=2.3e-07 Score=80.42 Aligned_cols=55 Identities=15% Similarity=0.296 Sum_probs=39.5
Q ss_pred CcccccCCcEEEEEEEeCCCCC-----------CCCCcCCCCCC----CceEEEEEEC--------CeEEEEeccCCC
Q psy9431 1 MFESYAGLHCVVIKGYSKSAGY-----------QPGVKFEDNRF----RNSWNAVYVA--------GAWRFVQCNWGA 55 (119)
Q Consensus 1 ~lc~~aGi~~~~V~G~~k~~~~-----------~pg~~~~~~~~----~HaWN~V~ld--------g~W~liD~Twga 55 (119)
.|||++||||++|+||..+.+. ..|........ .||||+|+++ |.|+.+|+|-..
T Consensus 281 ~~lR~lGIPaR~Vtgy~s~~d~~~nL~~d~~~~~~g~~~~~~~dsIW~~HaW~E~w~~rpDLp~~~~gW~~~DpT~~~ 358 (692)
T 1vjj_A 281 TALRSLGIPSRVITNFNSAHDTDRNLSVDVYYDPMGNPLDKGSDSVWNFHVWNEGWFVRSDLGPSYGGWQVLDATPQE 358 (692)
T ss_dssp HHHHHHTCCEEEEEEEEEEECSSSSSEEEEEECTTSCBCCCCSCEEEEEEEEEEEEECCTTTCGGGCEEEEECCSCSS
T ss_pred HHHHhCCCCeeEEcccccccCCCCCcccceeeccCCcccccccccccceeEEEEEeccccCCCCCCCCEEEECCCCCC
Confidence 3799999999999999644321 11222211222 8999999998 799999999743
>2q3z_A Transglutaminase 2; transglutaminase 2, tissue transglutaminase, TG2, transferas; 2.00A {Homo sapiens} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4 PDB: 1kv3_A 3ly6_A*
Back Show alignment and structure
Probab=98.26 E-value=5.8e-07 Score=77.93 Aligned_cols=56 Identities=13% Similarity=0.223 Sum_probs=38.7
Q ss_pred CcccccCCcEEEEEEEeCCCC----------CC-CCCcCCCC----CCCceEEEEEEC--------CeEEEEeccCCCc
Q psy9431 1 MFESYAGLHCVVIKGYSKSAG----------YQ-PGVKFEDN----RFRNSWNAVYVA--------GAWRFVQCNWGAR 56 (119)
Q Consensus 1 ~lc~~aGi~~~~V~G~~k~~~----------~~-pg~~~~~~----~~~HaWN~V~ld--------g~W~liD~Twgag 56 (119)
.|||++||||++|+||..+.+ +. .|...... ...|||++|+++ +.|.-+|+|-+..
T Consensus 286 ~llRalGIPAR~VsGy~~~~~~~~~l~~d~~~~~~g~~~~~~~d~~~~~HAW~Ev~~~rpDLp~g~~GW~~~DpT~~~~ 364 (687)
T 2q3z_A 286 TVLRCLGIPTRVVTNYNSAHDQNSNLLIEYFRNEFGEIQGDKSEMIWNFHCWVESWMTRPDLQPGYEGWQALDPTPQEK 364 (687)
T ss_dssp HHHHHHTCCEEEEEEEEEECC--CCHHHHHHHC---------CCCCBSEEEEEEEEECCTTSSTTCCEEEEECCSSCCC
T ss_pred HHHHhCCCCcEEEeecccccccccccccccccCCCCceeeecCCcccceeEEEEEEcccCCCCCCCCCEEEECCCCCcc
Confidence 389999999999999985421 01 12111111 138999999999 5899999998754
>1g0d_A Protein-glutamine gamma-glutamyltransferase; tissue transglutaminase,acyltransferase; 2.50A {Pagrus major} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4
Back Show alignment and structure
Probab=98.24 E-value=1e-06 Score=76.46 Aligned_cols=53 Identities=8% Similarity=0.204 Sum_probs=39.1
Q ss_pred cccccCCcEEEEEEEeCCCCC----------CC-CCcCCC--CC----CCceEEEEEEC--------CeEEEEeccCC
Q psy9431 2 FESYAGLHCVVIKGYSKSAGY----------QP-GVKFED--NR----FRNSWNAVYVA--------GAWRFVQCNWG 54 (119)
Q Consensus 2 lc~~aGi~~~~V~G~~k~~~~----------~p-g~~~~~--~~----~~HaWN~V~ld--------g~W~liD~Twg 54 (119)
|||++||||++|+||..+.+- .. |..+.. .. ..||||+|+++ |.|..+|+|-.
T Consensus 282 ~lR~lGIPaR~Vtgy~sa~d~~~nL~id~~~~~~g~~~~~~~~~dsiw~~HaW~E~w~~rpDLp~~~~gWq~~DpTpq 359 (695)
T 1g0d_A 282 VLRCLGIPTRPITNFASAHDVDGNLSVDFLLNERLESLDSRQRSDSSWNFHCWVESWMSREDLPEGNDGWQVLDPTPQ 359 (695)
T ss_dssp HHHHHTCCEEEEEEEEETTTTTTCSEEEEEECTTSCBSCTTCCBCSSEEEEEEEEEEECCTTSCTTCCEEEEEECSCC
T ss_pred HHHhCCCCeeEEccccccCCCCCccceeeeecccCceecccccCCcceeeEEEEEeecccCCCCCCCCCeEEEcCCCc
Confidence 799999999999999875431 11 222211 11 48999999998 78999999973
>1ex0_A Coagulation factor XIII A chain; transglutaminase, blood coagulation, mutant, W279F, oxyanion, transferase; 2.00A {Homo sapiens} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4 PDB: 1evu_A 1fie_A 1f13_A 1ggt_A 1ggu_A 1ggy_A 1qrk_A
Back Show alignment and structure
Probab=98.08 E-value=3.6e-06 Score=73.41 Aligned_cols=52 Identities=17% Similarity=0.418 Sum_probs=38.3
Q ss_pred cccccCCcEEEEEEEeCCCCCC----------C-CCcCCC-CC----CCceEEEEEEC--------CeEEEEeccC
Q psy9431 2 FESYAGLHCVVIKGYSKSAGYQ----------P-GVKFED-NR----FRNSWNAVYVA--------GAWRFVQCNW 53 (119)
Q Consensus 2 lc~~aGi~~~~V~G~~k~~~~~----------p-g~~~~~-~~----~~HaWN~V~ld--------g~W~liD~Tw 53 (119)
|||++||||++|+||..+.+.. . |..+.. .+ ..|+||+|++. |.|.-+|+|=
T Consensus 324 ~lR~lGIPaRvVtgy~sa~d~~~~l~v~~~~~~~g~~~~~~~~dsIW~~H~W~E~w~~rpDLp~g~~GWq~~DpTp 399 (731)
T 1ex0_A 324 FLRCLGIPARIVTNYFSAHDNDANLQMDIFLEEDGNVNSKLTKDSVWNYHCWNEAWMTRPDLPVGFGGWQAVDSTP 399 (731)
T ss_dssp HHHHHTCCEEEEEEEEECCSCTTBCEEEEEECTTSCBCTTTCCCCCEEEEEEEEEEECCTTSCTTCCEEEEEEEEE
T ss_pred HHHhCCCCeeEEcccccCCCCCCcceeeEEecccCccccccccCccceeeEEEEEeccccCCCCCCCCeEEEcCCC
Confidence 7899999999999998765311 1 222211 11 37999999997 6899999994
>1x3z_A Peptide: N-glycanase; hydrolase-hydrolase inhibitor complex; HET: SUC; 2.80A {Saccharomyces cerevisiae} SCOP: d.3.1.4 PDB: 1x3w_A* 3esw_A*
Back Show alignment and structure
Probab=97.75 E-value=2.9e-05 Score=62.33 Aligned_cols=39 Identities=13% Similarity=0.163 Sum_probs=33.4
Q ss_pred CcccccCCcEEEEEEEeCCCCCCCCCcCCCCCCCceEEEEEECC--eEEEEeccCCC
Q psy9431 1 MFESYAGLHCVVIKGYSKSAGYQPGVKFEDNRFRNSWNAVYVAG--AWRFVQCNWGA 55 (119)
Q Consensus 1 ~lc~~aGi~~~~V~G~~k~~~~~pg~~~~~~~~~HaWN~V~ldg--~W~liD~Twga 55 (119)
.|||++||+|++|.|+ ..|+|++|++++ +|.-||+|-+.
T Consensus 193 ~llRalGi~aR~V~~~----------------~~H~W~EV~~~~~~rWv~vDp~~~~ 233 (335)
T 1x3z_A 193 LILKSFGLDVRYVWNR----------------EDHVWCEYFSNFLNRWVHVDSCEQS 233 (335)
T ss_dssp HHHHTTTCCEEEEEET----------------TTEEEEEEEETTTTEEEEEETTTTE
T ss_pred HHHHHCCCCeEEEecC----------------CCcEEEEEEECCCCCEEEECCCCCc
Confidence 3799999999999871 379999999995 79999999643
>1e2t_A NAT, N-hydroxyarylamine O-acetyltransferase; acetyl COA dependent; 2.8A {Salmonella typhimurium} SCOP: d.3.1.5
Back Show alignment and structure
Probab=93.01 E-value=0.26 Score=37.95 Aligned_cols=50 Identities=12% Similarity=0.084 Sum_probs=39.5
Q ss_pred cccccCCcEEEEEEEeCCCCCCCCCcCCCCCCCceEEEEEECCeEEEEeccCCCc
Q psy9431 2 FESYAGLHCVVIKGYSKSAGYQPGVKFEDNRFRNSWNAVYVAGAWRFVQCNWGAR 56 (119)
Q Consensus 2 lc~~aGi~~~~V~G~~k~~~~~pg~~~~~~~~~HaWN~V~ldg~W~liD~Twgag 56 (119)
+.+.+|.++..+.|-..... ++. . ....|.=+.|.+||+.|++|+..|+.
T Consensus 82 ~L~~LGF~V~~~~~rV~~~~--~~~-~--~~~~H~~l~V~idg~~ylvDVGFG~~ 131 (284)
T 1e2t_A 82 ALRDIGFNVRSLLGRVILSH--PAS-L--PPRTHRLLLVDVEDEQWIADVGFGGQ 131 (284)
T ss_dssp HHHHTTCCEEEEEEEECTTC--CSS-C--CCSCEEEEEEEETTEEEEECSCSCTT
T ss_pred HHHHCCCeEEEEEEEEecCC--CCC-C--CCCccEEEEEEECCceEEEecCCCcc
Confidence 45789999999999986532 111 1 13689999999999999999999985
>2bsz_A Arylamine N-acetyltransferase 1; acyltransferase, complete proteome; 2.0A {Rhizobium loti} SCOP: d.3.1.5
Back Show alignment and structure
Probab=92.18 E-value=0.33 Score=37.29 Aligned_cols=51 Identities=8% Similarity=-0.068 Sum_probs=39.1
Q ss_pred cccccCCcEEEEEEEeCCCCCCCCCcCCCCCCCceEEEEEECCeEEEEeccCCCc
Q psy9431 2 FESYAGLHCVVIKGYSKSAGYQPGVKFEDNRFRNSWNAVYVAGAWRFVQCNWGAR 56 (119)
Q Consensus 2 lc~~aGi~~~~V~G~~k~~~~~pg~~~~~~~~~HaWN~V~ldg~W~liD~Twgag 56 (119)
+.+.+|.++..+.|-..... ++ .+. ....|.=+.|.+||+.|++|+..|+.
T Consensus 83 ~L~~LGF~V~~~~arV~~~~--~~-~~~-~~~~H~~l~V~idg~~ylvDVGFG~~ 133 (278)
T 2bsz_A 83 ALKALGFEVGGLAARVLWGQ--SE-DAI-TARSHMLLRVELDGRTYIADVGFGGL 133 (278)
T ss_dssp HHHHHTCEEEEEEEEECSSC--CS-SSS-CCCCEEEEEEEETTEEEEECSCCSSS
T ss_pred HHHHCCCeEEEEEEEEeeCC--CC-CCC-CCCccEEEEEEECCceEEEeCCCCcc
Confidence 45789999999999885321 11 111 13689999999999999999999986
>2qsf_A RAD4, DNA repair protein RAD4; alpha-beta structure, beta hairpin, transglutaminase fold, DNA-damage recognition, DNA repair; HET: DNA; 2.35A {Saccharomyces cerevisiae} PDB: 2qsg_A* 2qsh_A*
Back Show alignment and structure
Probab=92.07 E-value=0.4 Score=40.40 Aligned_cols=53 Identities=9% Similarity=0.075 Sum_probs=34.4
Q ss_pred CcccccCCcEEEEEEEeCCCCCCCCCc----------CCCCCCCceEEEEEEC--CeEEEEeccCC
Q psy9431 1 MFESYAGLHCVVIKGYSKSAGYQPGVK----------FEDNRFRNSWNAVYVA--GAWRFVQCNWG 54 (119)
Q Consensus 1 ~lc~~aGi~~~~V~G~~k~~~~~pg~~----------~~~~~~~HaWN~V~ld--g~W~liD~Twg 54 (119)
.|||++|++|+.|...- ..++..... .......|-|.+|+-. ++|..||++=+
T Consensus 172 aLlRalG~~aRlV~SLq-P~~f~~~k~~~~~~k~~~~~~~~~~P~~W~EV~s~~~~rWi~VDp~~~ 236 (533)
T 2qsf_A 172 AMLRACNVNARLIMSCQ-PPDFTNMKIDTSLNGNNAYKDMVKYPIFWCEVWDKFSKKWITVDPVNL 236 (533)
T ss_dssp HHHHHTTCCEEEEEEEC-CCCTTCCBSCCCCC---CHHHHTTSCSEEEEEEETTTTEEEEEESSSS
T ss_pred HHHHHCCCceEEEeccc-cccccccccccCcccCCccccccCCCeEEEEEEEcCCCeEEEEecccc
Confidence 38999999999997531 111100000 0001246999999985 89999999865
>2ija_A Arylamine N-acetyltransferase 1; arylamide acetylase 1, structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} PDB: 2pqt_A* 2pfr_A*
Back Show alignment and structure
Probab=90.41 E-value=0.36 Score=37.30 Aligned_cols=52 Identities=17% Similarity=0.201 Sum_probs=39.4
Q ss_pred cccccCCcEEEEEEEeCCCCCCCCCcCCCCCCCceEEEEEECCeEEEEeccCCCcc
Q psy9431 2 FESYAGLHCVVIKGYSKSAGYQPGVKFEDNRFRNSWNAVYVAGAWRFVQCNWGARH 57 (119)
Q Consensus 2 lc~~aGi~~~~V~G~~k~~~~~pg~~~~~~~~~HaWN~V~ldg~W~liD~Twgag~ 57 (119)
+.+.+|.++..+.|-..... ++ .+. ....|.=+.|.+||+.|++|+..|+..
T Consensus 83 ~L~~LGF~V~~~~~rV~~~~--~~-~~~-~~~~H~~l~V~idg~~ylvDVGFG~~~ 134 (295)
T 2ija_A 83 ALTTIGFETTMLGGYVYSTP--AK-KYS-TGMIHLLLQVTIDGRNYIVDAGSGRSY 134 (295)
T ss_dssp HHHHHTCEEEEEEEEEEETT--TT-EEC-SSCCEEEEEEEETTEEEEECSCCCGGG
T ss_pred HHHHcCCcEEEEEEEEeeCC--CC-CCC-CCCCcEEEEEEECCceEEEeCCCCCcc
Confidence 45788999999999876431 11 111 125899999999999999999999764
>1w4t_A Arylamine N-acetyltransferase; 5- aminosalicylic acid, NAT, xenobiotic metabolism, acyltransferase; 1.95A {Pseudomonas aeruginosa} SCOP: d.3.1.5
Back Show alignment and structure
Probab=90.23 E-value=0.47 Score=36.91 Aligned_cols=52 Identities=12% Similarity=0.057 Sum_probs=39.1
Q ss_pred cccccCCcEEEEEEEeCCCCCCCCCcCCCCCCCceEEEEEECCeEEEEeccCCCc
Q psy9431 2 FESYAGLHCVVIKGYSKSAGYQPGVKFEDNRFRNSWNAVYVAGAWRFVQCNWGAR 56 (119)
Q Consensus 2 lc~~aGi~~~~V~G~~k~~~~~pg~~~~~~~~~HaWN~V~ldg~W~liD~Twgag 56 (119)
+.+.+|.++..+.|-..... ++. .......|.=+.|.+||+.|++|+..|+.
T Consensus 103 ~L~~LGF~V~~l~arV~~~~--~~~-~~~~~~~H~~l~V~idg~~ylvDVGFG~~ 154 (299)
T 1w4t_A 103 LLLALGYELELLVARVRWGL--PDD-APLTQQSHLMLRLYLAEGEFLVDVGFGSA 154 (299)
T ss_dssp HHHHTTCEEEEEEEEECTTC--CTT-SCCCCEEEEEEEEEETTEEEEECSCSGGG
T ss_pred HHHHcCCeEEEEEEEEEeCC--CCc-CCCCCCccEEEEEEECCceEEEeCCCCCc
Confidence 45789999999999886431 111 10013579999999999999999999985
>3lnb_A N-acetyltransferase family protein; arylamine N-acetyltransferase, NAT, acetyltrans acyltransferase; HET: COA; 2.01A {Bacillus anthracis}
Back Show alignment and structure
Probab=89.46 E-value=0.48 Score=37.23 Aligned_cols=51 Identities=8% Similarity=0.005 Sum_probs=39.5
Q ss_pred cccccCCcEEEEEEEeCCCCCCCCCcCCCCCCCceEEEEEECCeEEEEeccCCCc
Q psy9431 2 FESYAGLHCVVIKGYSKSAGYQPGVKFEDNRFRNSWNAVYVAGAWRFVQCNWGAR 56 (119)
Q Consensus 2 lc~~aGi~~~~V~G~~k~~~~~pg~~~~~~~~~HaWN~V~ldg~W~liD~Twgag 56 (119)
+.+++|.++..+.|.....+. + .+. ....|.=+.|.+||+.|++|+..|+.
T Consensus 109 ~L~~lGf~v~~~~arV~~~~~--~-~~~-~~~~H~~l~V~~~g~~ylvDVGFG~~ 159 (309)
T 3lnb_A 109 FLMDCGFQVYKVAGTVYDLYD--N-KWK-PDDGHVIIILHHNKKDYVIDAGFASH 159 (309)
T ss_dssp HHHHTTCEEEEEEEEEEETTT--T-EEC-STTCEEEEEEEETTEEEEECSCSTTC
T ss_pred HHHHcCCeEEEEeEEEecCCC--C-CCC-CCCccEEEEEEECCeEEEEecCCCCc
Confidence 457899999999998865421 1 111 12589999999999999999999985
>2vfb_A Arylamine N-acetyltransferase; NAT, acetyl COA, mycobacteria, actyltransferase; 2.00A {Mycobacterium marinum} PDB: 2vfc_A* 3ltw_A*
Back Show alignment and structure
Probab=86.29 E-value=0.92 Score=34.79 Aligned_cols=53 Identities=15% Similarity=0.088 Sum_probs=39.2
Q ss_pred cccccCCcEEEEEEEeCCCCCCCCCcCCCCCCCceEEEEEECCeE--EEEeccCCCcc
Q psy9431 2 FESYAGLHCVVIKGYSKSAGYQPGVKFEDNRFRNSWNAVYVAGAW--RFVQCNWGARH 57 (119)
Q Consensus 2 lc~~aGi~~~~V~G~~k~~~~~pg~~~~~~~~~HaWN~V~ldg~W--~liD~Twgag~ 57 (119)
+.+.+|.++..+.|-..... ++. .......|.=+.|.+||+. |++|+..|+..
T Consensus 80 ~L~~LGF~V~~~~arV~~~~--~~~-~~~~~~~H~~l~V~idg~~~~ylvDVGFG~~~ 134 (280)
T 2vfb_A 80 VLAELGYRVRRLAGRVVWLA--PPD-APTPAQTHTVLAVTFPGCQGPYLVDVGFGGMT 134 (280)
T ss_dssp HHHHHTCEEEEEEEEECTTC--CTT-SCCCCSCEEEEEEECTTCSSCEEECSCSGGGC
T ss_pred HHHHCCCeEEEEEEEEEeCC--CCC-CCCCCCCcEEEEEEECCeEEEEEEecCCCccC
Confidence 45788999999999885321 111 1001358999999999999 99999999853
>1w5r_A Arylamine N-acetyltransferase; acyltransferase; 1.45A {Mycobacterium smegmatis} SCOP: d.3.1.5 PDB: 1w6f_A* 1gx3_A
Back Show alignment and structure
Probab=85.42 E-value=0.95 Score=34.69 Aligned_cols=53 Identities=15% Similarity=0.075 Sum_probs=39.2
Q ss_pred cccccCCcEEEEEEEeCCCCCCCCCcCCCCCCCceEEEEEECCeE--EEEeccCCCcc
Q psy9431 2 FESYAGLHCVVIKGYSKSAGYQPGVKFEDNRFRNSWNAVYVAGAW--RFVQCNWGARH 57 (119)
Q Consensus 2 lc~~aGi~~~~V~G~~k~~~~~pg~~~~~~~~~HaWN~V~ldg~W--~liD~Twgag~ 57 (119)
+.+.+|.++..+.|-..... ++ ........|.=+.|.+||+. |++|+..|+..
T Consensus 83 ~L~~LGF~V~~~~arV~~~~--~~-~~~~~~~~H~~l~V~idg~~~~ylvDVGFG~~~ 137 (278)
T 1w5r_A 83 VLEELGFEVERLSGRVVWMR--AD-DAPLPAQTHNVLSVAVPGADGRYLVDVGFGGQT 137 (278)
T ss_dssp HHHHHTCEEEEEEEEECTTC--CT-TCCCCCEEEEEEEEECSSCSCCEEECSCSCTTC
T ss_pred HHHHcCCeEEEEEEEEeeCC--CC-CCCCCCCccEEEEEEECCeEEEEEEecCCCccC
Confidence 45789999999999885321 11 11001257999999999999 99999999863
>3d9w_A Putative acetyltransferase; arylamine N-acetyltransferase, NAT, X-RAY diffraction, acyltransferase; 2.70A {Nocardia farcinica}
Back Show alignment and structure
Probab=83.46 E-value=1.2 Score=34.39 Aligned_cols=49 Identities=8% Similarity=-0.016 Sum_probs=39.1
Q ss_pred cccccCCcEEEEEEEeCCCCCCCCCcCCCCCCCceEEEE-EEC-CeEEEEeccCCCc
Q psy9431 2 FESYAGLHCVVIKGYSKSAGYQPGVKFEDNRFRNSWNAV-YVA-GAWRFVQCNWGAR 56 (119)
Q Consensus 2 lc~~aGi~~~~V~G~~k~~~~~pg~~~~~~~~~HaWN~V-~ld-g~W~liD~Twgag 56 (119)
+.+++|.++..+.|....... .. ....|.=+.| .+| |+.||+|+..|.+
T Consensus 92 ~L~~LGF~V~~~~arV~~~~~----~~--~~~~H~~l~V~~l~dg~~ylvDVGFG~~ 142 (293)
T 3d9w_A 92 ALERLGFGVTGHTGRVTMGAG----GL--RPATHALLRVTTADDDRVWMCDVGFGRG 142 (293)
T ss_dssp HHHHTTCEEEEEEEEECTTCC----SC--CCEEEEEEEEECSSCSCEEEECCSSSSC
T ss_pred HHHHcCCeEEEEEEEEecCCC----CC--CCCccEEEEEEEcCCCCeEEEecCCCcC
Confidence 457899999999999875421 11 1358999999 999 9999999999954
Homologous Structure Domains
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
ID Alignment Graph Length
Definition
Probability Query 119
d2q3za4 316
Transglutaminase catalytic domain {Human (Homo sap
98.24 d2f4ma1 287
Peptide:N-glycanase 1, PNG1 {Mouse (Mus musculus)
98.07 d1g0da4 321
Transglutaminase catalytic domain {Red sea bream (
96.92 d1vjja4 321
Transglutaminase catalytic domain {Human (Homo sap
96.58 d1ex0a4 320
Transglutaminase catalytic domain {Human (Homo sap
96.41 d1x3za1 320
Peptide:N-glycanase 1, PNG1 {Baker's yeast(Sacchar
95.87 d2bsza1 270
Arylamine N-acetyltransferase {Rhizobium loti [Tax
93.21 d1e2ta_ 274
Arylamine N-acetyltransferase {Salmonella typhimur
92.8 d1w4ta1 277
Arylamine N-acetyltransferase {Pseudomonas aerugin
90.95 d1w5ra1 273
Arylamine N-acetyltransferase {Mycobacterium smegm
88.69
>d2q3za4 d.3.1.4 (A:146-461) Transglutaminase catalytic domain {Human (Homo sapiens), tissue isozyme [TaxId: 9606]}
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class: Alpha and beta proteins (a+b)
fold: Cysteine proteinases
superfamily: Cysteine proteinases
family: Transglutaminase core
domain: Transglutaminase catalytic domain
species: Human (Homo sapiens), tissue isozyme [TaxId: 9606]
Probab=98.24 E-value=3.4e-07 Score=70.97 Aligned_cols=54 Identities=15% Similarity=0.198 Sum_probs=36.9
Q ss_pred CcccccCCcEEEEEEEeCCCC---------------CCCCCcCCCCCCCceEEEEEEC--------CeEEEEeccCC
Q psy9431 1 MFESYAGLHCVVIKGYSKSAG---------------YQPGVKFEDNRFRNSWNAVYVA--------GAWRFVQCNWG 54 (119)
Q Consensus 1 ~lc~~aGi~~~~V~G~~k~~~---------------~~pg~~~~~~~~~HaWN~V~ld--------g~W~liD~Twg 54 (119)
.|||++||||++|+||..+-+ ...+.........|+||+|++. |.|..||+|=-
T Consensus 141 tvlR~lGIPaRvVT~f~sahdt~~~l~vd~~~~e~g~~~~~~~d~~wn~H~W~E~wm~r~DL~~gy~GWq~~DpTPq 217 (316)
T d2q3za4 141 TVLRCLGIPTRVVTNYNSAHDQNSNLLIEYFRNEFGEIQGDKSEMIWNFHCWVESWMTRPDLQPGYEGWQALDPTPQ 217 (316)
T ss_dssp HHHHHHTCCEEEEEEEEEECC--CCHHHHHHHC---------CCCCBSEEEEEEEEECCTTSSTTCCEEEEECCSSC
T ss_pred HHHHhcCCCceEeccccccccCCCCcceeeeccCCCccccccceeecceeeeeeeeecccCCCCCCCCceEecCCcc
Confidence 389999999999999975421 1111111111258999999996 47999999953
>d2f4ma1 d.3.1.4 (A:164-450) Peptide:N-glycanase 1, PNG1 {Mouse (Mus musculus) [TaxId: 10090]}
Back Show information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: Cysteine proteinases
superfamily: Cysteine proteinases
family: Transglutaminase core
domain: Peptide:N-glycanase 1, PNG1
species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.07 E-value=1.2e-06 Score=67.27 Aligned_cols=39 Identities=15% Similarity=0.358 Sum_probs=34.2
Q ss_pred CcccccCCcEEEEEEEeCCCCCCCCCcCCCCCCCceEEEEEEC--CeEEEEeccCCC
Q psy9431 1 MFESYAGLHCVVIKGYSKSAGYQPGVKFEDNRFRNSWNAVYVA--GAWRFVQCNWGA 55 (119)
Q Consensus 1 ~lc~~aGi~~~~V~G~~k~~~~~pg~~~~~~~~~HaWN~V~ld--g~W~liD~Twga 55 (119)
.|||++||+|++|.||. +|+|++|+++ ++|..+|+|.+.
T Consensus 152 ~~~Ra~g~~aR~v~~~~----------------~H~W~Ev~~~~~~rWv~vDp~~~~ 192 (287)
T d2f4ma1 152 LCCRALGFEARYVWDYT----------------DHVWTEVYSPSQQRWLHCDACEDV 192 (287)
T ss_dssp HHHHHTTCCEEEEEETT----------------TEEEEEEEETTTTEEEEEETTTTE
T ss_pred HHHHHcCCCeEEEecCC----------------cceeEEEEecCCCcEEEecCcccc
Confidence 37999999999999852 6999999997 679999999875
>d1g0da4 d.3.1.4 (A:141-461) Transglutaminase catalytic domain {Red sea bream (Chrysophrys major) [TaxId: 143350]}
Back Show information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: Cysteine proteinases
superfamily: Cysteine proteinases
family: Transglutaminase core
domain: Transglutaminase catalytic domain
species: Red sea bream (Chrysophrys major) [TaxId: 143350]
Probab=96.92 E-value=0.00063 Score=52.29 Aligned_cols=52 Identities=8% Similarity=0.208 Sum_probs=36.8
Q ss_pred cccccCCcEEEEEEEeCCCCCCC-----------CCcCCCC---C---CCceEEEEEEC--------CeEEEEeccC
Q psy9431 2 FESYAGLHCVVIKGYSKSAGYQP-----------GVKFEDN---R---FRNSWNAVYVA--------GAWRFVQCNW 53 (119)
Q Consensus 2 lc~~aGi~~~~V~G~~k~~~~~p-----------g~~~~~~---~---~~HaWN~V~ld--------g~W~liD~Tw 53 (119)
+||++||||++|+.|...-+-.. |..+... . ..|-||++... |.|..||+|=
T Consensus 142 vlRcLGIP~RvVTNf~SAHDt~~nL~iD~y~de~g~~l~~~~~~DsiWNfHvWnE~WM~RpDL~~gy~GWQ~~D~TP 218 (321)
T d1g0da4 142 VLRCLGIPTRPITNFASAHDVDGNLSVDFLLNERLESLDSRQRSDSSWNFHCWVESWMSREDLPEGNDGWQVLDPTP 218 (321)
T ss_dssp HHHHHTCCEEEEEEEEETTTTTTCSEEEEEECTTSCBSCTTCCBCSSEEEEEEEEEEECCTTSCTTCCEEEEEECSC
T ss_pred HHHhcCCCceeecccccccCCCCCceeeEEEcCCCCCcCCcCCCCceeeecccceeeeeccccCcCCCCceeccCCc
Confidence 68999999999999975442111 1122110 1 47999999984 7899999985
>d1vjja4 d.3.1.4 (A:141-461) Transglutaminase catalytic domain {Human (Homo sapiens), TGase E3 [TaxId: 9606]}
Back Show information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: Cysteine proteinases
superfamily: Cysteine proteinases
family: Transglutaminase core
domain: Transglutaminase catalytic domain
species: Human (Homo sapiens), TGase E3 [TaxId: 9606]
Probab=96.58 E-value=0.00092 Score=51.35 Aligned_cols=52 Identities=15% Similarity=0.349 Sum_probs=36.5
Q ss_pred cccccCCcEEEEEEEeCCCCCCC-----------CCcCCCCC----CCceEEEEEEC--------CeEEEEeccC
Q psy9431 2 FESYAGLHCVVIKGYSKSAGYQP-----------GVKFEDNR----FRNSWNAVYVA--------GAWRFVQCNW 53 (119)
Q Consensus 2 lc~~aGi~~~~V~G~~k~~~~~p-----------g~~~~~~~----~~HaWN~V~ld--------g~W~liD~Tw 53 (119)
+||++||||++|+-|...-+-.. |..+...+ ..|-||++... |.|..||+|=
T Consensus 142 vlRcLGIP~RvVTNf~SAHDt~~nLtiD~y~de~g~~~~~~~DsiWNFHvWnE~WM~RpDL~~gy~GWQ~lDaTP 216 (321)
T d1vjja4 142 ALRSLGIPSRVITNFNSAHDTDRNLSVDVYYDPMGNPLDKGSDSVWNFHVWNEGWFVRSDLGPSYGGWQVLDATP 216 (321)
T ss_dssp HHHHHTCCEEEEEEEEEEECSSSSSEEEEEECTTSCBCCCCSCEEEEEEEEEEEEECCTTTCGGGCEEEEECCSC
T ss_pred hhhhcCCCcceeccccccCCCCCCcEEEEEEcCCCCCCCCCCceEEeeeccceeeecccccCcCCCcceeccCCc
Confidence 68999999999999985432111 22221111 47999999984 7899999984
>d1ex0a4 d.3.1.4 (A:191-510) Transglutaminase catalytic domain {Human (Homo sapiens), blood isozyme [TaxId: 9606]}
Back Show information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: Cysteine proteinases
superfamily: Cysteine proteinases
family: Transglutaminase core
domain: Transglutaminase catalytic domain
species: Human (Homo sapiens), blood isozyme [TaxId: 9606]
Probab=96.41 E-value=0.0022 Score=49.13 Aligned_cols=52 Identities=17% Similarity=0.423 Sum_probs=37.0
Q ss_pred cccccCCcEEEEEEEeCCCCCCC-----------CCcCCC-CC----CCceEEEEEEC--------CeEEEEeccC
Q psy9431 2 FESYAGLHCVVIKGYSKSAGYQP-----------GVKFED-NR----FRNSWNAVYVA--------GAWRFVQCNW 53 (119)
Q Consensus 2 lc~~aGi~~~~V~G~~k~~~~~p-----------g~~~~~-~~----~~HaWN~V~ld--------g~W~liD~Tw 53 (119)
+||++||||++|+-|...-+-.. |..... .+ ..|-||++... |.|..||+|=
T Consensus 134 vlR~LGIP~RvVTnf~SAHDt~~~L~iD~y~de~G~~~~~~~~DsiWNFHvWnE~WM~RpDL~~gy~GWQ~lD~TP 209 (320)
T d1ex0a4 134 FLRCLGIPARIVTNYFSAHDNDANLQMDIFLEEDGNVNSKLTKDSVWNYHCWNEAWMTRPDLPVGFGGWQAVDSTP 209 (320)
T ss_dssp HHHHHTCCEEEEEEEEECCSCTTBCEEEEEECTTSCBCTTTCCCCCEEEEEEEEEEECCTTSCTTCCEEEEEEEEE
T ss_pred hhhccCCCCceeccccccccCCCcceeeeeeccCCCCCcCCCCCceEeeeeceeeeecccccCcCCCcceeccCCc
Confidence 58999999999999986543221 111110 01 37999999984 7899999984
>d1x3za1 d.3.1.4 (A:8-327) Peptide:N-glycanase 1, PNG1 {Baker's yeast(Saccharomyces cerevisiae) [TaxId: 4932]}
Back Show information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: Cysteine proteinases
superfamily: Cysteine proteinases
family: Transglutaminase core
domain: Peptide:N-glycanase 1, PNG1
species: Baker's yeast(Saccharomyces cerevisiae) [TaxId: 4932]
Probab=95.87 E-value=0.0028 Score=48.69 Aligned_cols=38 Identities=16% Similarity=0.263 Sum_probs=31.7
Q ss_pred CcccccCCcEEEEEEEeCCCCCCCCCcCCCCCCCceEEEEEEC--CeEEEEeccCC
Q psy9431 1 MFESYAGLHCVVIKGYSKSAGYQPGVKFEDNRFRNSWNAVYVA--GAWRFVQCNWG 54 (119)
Q Consensus 1 ~lc~~aGi~~~~V~G~~k~~~~~pg~~~~~~~~~HaWN~V~ld--g~W~liD~Twg 54 (119)
++|+++|++|+.|-- ...|.|.+|+.. ++|..||++=+
T Consensus 193 ~~~ra~g~~aR~V~~----------------~~DhvW~EVys~~~kRWIhvDpce~ 232 (320)
T d1x3za1 193 LILKSFGLDVRYVWN----------------REDHVWCEYFSNFLNRWVHVDSCEQ 232 (320)
T ss_dssp HHHHTTTCCEEEEEE----------------TTTEEEEEEEETTTTEEEEEETTTT
T ss_pred HHHHHcCCceEEEEE----------------CCCceEEEEeecccCeEEEEcCCCC
Confidence 479999999999842 137999999998 68999999644
>d2bsza1 d.3.1.5 (A:6-275) Arylamine N-acetyltransferase {Rhizobium loti [TaxId: 381]}
Back Show information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: Cysteine proteinases
superfamily: Cysteine proteinases
family: Arylamine N-acetyltransferase
domain: Arylamine N-acetyltransferase
species: Rhizobium loti [TaxId: 381]
Probab=93.21 E-value=0.1 Score=38.05 Aligned_cols=52 Identities=8% Similarity=-0.059 Sum_probs=39.7
Q ss_pred cccccCCcEEEEEEEeCCCCCCCCCcCCCCCCCceEEEEEECCeEEEEeccCCCcc
Q psy9431 2 FESYAGLHCVVIKGYSKSAGYQPGVKFEDNRFRNSWNAVYVAGAWRFVQCNWGARH 57 (119)
Q Consensus 2 lc~~aGi~~~~V~G~~k~~~~~pg~~~~~~~~~HaWN~V~ldg~W~liD~Twgag~ 57 (119)
+.+.+|.++..+.|-..... ++.... ..+|.=+.|.+||+.|++|+-.|+..
T Consensus 78 lL~~LGF~v~~~~~rV~~~~--~~~~~~--~~~H~~l~V~i~g~~ylvDvGfG~~~ 129 (270)
T d2bsza1 78 ALKALGFEVGGLAARVLWGQ--SEDAIT--ARSHMLLRVELDGRTYIADVGFGGLT 129 (270)
T ss_dssp HHHHHTCEEEEEEEEECSSC--CSSSSC--CCCEEEEEEEETTEEEEECSCCSSSC
T ss_pred HHHHcCCceEEEEEEEecCC--CCCCCC--CCCCEEEEEEECCeeEEEecccCccc
Confidence 45789999999999876431 121221 35899999999999999999998753
>d1e2ta_ d.3.1.5 (A:) Arylamine N-acetyltransferase {Salmonella typhimurium [TaxId: 90371]}
Back Show information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: Cysteine proteinases
superfamily: Cysteine proteinases
family: Arylamine N-acetyltransferase
domain: Arylamine N-acetyltransferase
species: Salmonella typhimurium [TaxId: 90371]
Probab=92.80 E-value=0.14 Score=37.51 Aligned_cols=51 Identities=10% Similarity=0.028 Sum_probs=38.9
Q ss_pred cccccCCcEEEEEEEeCCCCCCCCCcCCCCCCCceEEEEEECCeEEEEeccCCCcc
Q psy9431 2 FESYAGLHCVVIKGYSKSAGYQPGVKFEDNRFRNSWNAVYVAGAWRFVQCNWGARH 57 (119)
Q Consensus 2 lc~~aGi~~~~V~G~~k~~~~~pg~~~~~~~~~HaWN~V~ldg~W~liD~Twgag~ 57 (119)
+.+++|..+..+.|-.-..+ +.... ..+|.=+.|.|||+-||+|+-+|+..
T Consensus 80 lL~~LGF~v~~~~arV~~~~---~~~~~--~~~H~~l~V~i~~~~yLvDvGfG~~~ 130 (274)
T d1e2ta_ 80 ALRDIGFNVRSLLGRVILSH---PASLP--PRTHRLLLVDVEDEQWIADVGFGGQT 130 (274)
T ss_dssp HHHHTTCCEEEEEEEECTTC---CSSCC--CSCEEEEEEEETTEEEEECSCSCTTC
T ss_pred HHHHcCCceEEEEEEEecCC---CCCCC--CCceEEEEEEECCeeEEEeccCCCcc
Confidence 45789999999999875432 11111 25899999999999999999998643
>d1w4ta1 d.3.1.5 (A:1-277) Arylamine N-acetyltransferase {Pseudomonas aeruginosa [TaxId: 287]}
Back Show information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: Cysteine proteinases
superfamily: Cysteine proteinases
family: Arylamine N-acetyltransferase
domain: Arylamine N-acetyltransferase
species: Pseudomonas aeruginosa [TaxId: 287]
Probab=90.95 E-value=0.18 Score=36.64 Aligned_cols=52 Identities=12% Similarity=0.056 Sum_probs=39.1
Q ss_pred cccccCCcEEEEEEEeCCCCCCCCCcCCCCCCCceEEEEEECCeEEEEeccCCCc
Q psy9431 2 FESYAGLHCVVIKGYSKSAGYQPGVKFEDNRFRNSWNAVYVAGAWRFVQCNWGAR 56 (119)
Q Consensus 2 lc~~aGi~~~~V~G~~k~~~~~pg~~~~~~~~~HaWN~V~ldg~W~liD~Twgag 56 (119)
+.+++|..+..+.|-..... ++.... ....|.=+.|.+||+-|++|+-.|+.
T Consensus 83 lL~~LGf~v~~~~arV~~~~--~~~~~~-~~~~H~~l~V~i~~~~ylvDvGfG~~ 134 (277)
T d1w4ta1 83 LLLALGYELELLVARVRWGL--PDDAPL-TQQSHLMLRLYLAEGEFLVDVGFGSA 134 (277)
T ss_dssp HHHHTTCEEEEEEEEECTTC--CTTSCC-CCEEEEEEEEEETTEEEEECSCSGGG
T ss_pred HHHHcCCceEEEEEEEEecC--CCCCCC-CCCceEEEEEEECCceEEEeeccCCc
Confidence 46789999999999876431 111111 13579999999999999999999875
>d1w5ra1 d.3.1.5 (A:3-275) Arylamine N-acetyltransferase {Mycobacterium smegmatis [TaxId: 1772]}
Back Show information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: Cysteine proteinases
superfamily: Cysteine proteinases
family: Arylamine N-acetyltransferase
domain: Arylamine N-acetyltransferase
species: Mycobacterium smegmatis [TaxId: 1772]
Probab=88.69 E-value=0.18 Score=36.71 Aligned_cols=52 Identities=13% Similarity=0.119 Sum_probs=36.8
Q ss_pred cccccCCcEEEEEEEeCCCCCCCCCcCCCCCCCceEEEEEECC--eEEEEeccCCCc
Q psy9431 2 FESYAGLHCVVIKGYSKSAGYQPGVKFEDNRFRNSWNAVYVAG--AWRFVQCNWGAR 56 (119)
Q Consensus 2 lc~~aGi~~~~V~G~~k~~~~~pg~~~~~~~~~HaWN~V~ldg--~W~liD~Twgag 56 (119)
+.+++|.++..+.|-.....- .+... ...+|.=+.|.|+| ++||+|+-+|+.
T Consensus 78 ~L~~LGf~v~~~~~rV~~~~~-~~~~~--~~~~H~~l~V~i~g~~~~ylvDVGfG~~ 131 (273)
T d1w5ra1 78 VLEELGFEVERLSGRVVWMRA-DDAPL--PAQTHNVLSVAVPGADGRYLVDVGFGGQ 131 (273)
T ss_dssp HHHHHTCEEEEEEEEECTTCC-TTCCC--CCEEEEEEEEECSSCSCCEEECSCSCTT
T ss_pred HHHHcCCceEEEEEEEEecCC-CCCCC--CCCcceEEEEEECCCCccEEEEccCCcc
Confidence 457899999999997642210 01111 12579999999986 699999999864
