Psyllid ID: psy979

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170------
MDLDAQGWDQIIAGSTVRKYIPHDCIDRVHSLFLLMEQLALVPSVSKILVIWNNQAKSPPPVSKWPKISKSWTIIRTDENKLSKRFYPYAEIETEAVLSIDDDITMLTPDELEFGFEYWNYMYTAHMPTPIRTYVDSHMNCEDIAMNFLVAHITAKAPFIHSIRAHCTASGIEELL
ccccccccccccccccEEEEEEEEEcccHHHHHHHHHHHHccccccEEEEEccccccccccccccccccccEEEEEccccccccccccccccccccEEEcccccccccHHHHHHHHHHHHccccccccHHHHHHHHcccccHHHHHHHHHHHHHccccEEEEEEEEEEcccccccc
ccccccccHHHHEccHHHHHcccccccHHHHHHHHHHHHHccccHcEEEEEEcccccccccccccccccccEEEEEcccccccccccccccccccEEEEEccccEEccHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHccHHHHHHHHHHHHHccccccEEccccHccHccHHHHc
mdldaqgwdqiiagstvrkyiphdciDRVHSLFLLMEQLALVPSVSKILVIWnnqakspppvskwpkiskswtiirtdenklskrfypyaeIETEAvlsiddditmltpdelEFGFEYWNYMytahmptpirtyvdshmnCEDIAMNFLVAHItakapfihsirAHCTASGIEELL
MDLDAQGWDQIIAGSTVRKYIPHDCIDRVHSLFLLMEQLALVPSVSKILVIWNnqakspppvskwpkiskswtiirtdenklskrfypyAEIETeavlsidddiTMLTPDELEFGFEYWNYMYTAHMPTPIRTYVDSHMNCEDIAMNFLVAHITAKAPFIHSIRAHCTASGIEELL
MDLDAQGWDQIIAGSTVRKYIPHDCIDRVHSLFLLMEQLALVPSVSKILVIWNNQAKSPPPVSKWPKISKSWTIIRTDENKLSKRFYPYAEIETEAVLSIDDDITMLTPDELEFGFEYWNYMYTAHMPTPIRTYVDSHMNCEDIAMNFLVAHITAKAPFIHSIRAHCTASGIEELL
******GWDQIIAGSTVRKYIPHDCIDRVHSLFLLMEQLALVPSVSKILVIWNNQA*****VSKWPKISKSWTIIRTDENKLSKRFYPYAEIETEAVLSIDDDITMLTPDELEFGFEYWNYMYTAHMPTPIRTYVDSHMNCEDIAMNFLVAHITAKAPFIHSIRAHCTA*******
***********IAGSTVRKYIPHDCIDRVHSLFLLMEQLALVPSVSKILVIWNNQAK**********ISKSWTIIRTDENKLSKRFYPYAEIETEAVLSIDDDITMLTPDELEFGFEYWNYMYTAHMPTPIRTYVDSHMNCEDIAMNFLVAHITAKAPFIHSIRAHCTASGIEE**
MDLDAQGWDQIIAGSTVRKYIPHDCIDRVHSLFLLMEQLALVPSVSKILVIWNNQA*********PKISKSWTIIRTDENKLSKRFYPYAEIETEAVLSIDDDITMLTPDELEFGFEYWNYMYTAHMPTPIRTYVDSHMNCEDIAMNFLVAHITAKAPFIHSIRAHCTASGIEELL
****AQGWDQIIAGSTVRKYIPHDCIDRVHSLFLLMEQLALVPSVSKILVIWNNQAKSPPPVSKWPKISKSWTIIRTDENKLSKRFYPYAEIETEAVLSIDDDITMLTPDELEFGFEYWNYMYTAHMPTPIRTYVDSHMNCEDIAMNFLVAHITAKAPFIHSIRAHCTASG*****
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
ooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MDLDAQGWDQIIAGSTVRKYIPHDCIDRVHSLFLLMEQLALVPSVSKILVIWNNQAKSPPPVSKWPKISKSWTIIRTDENKLSKRFYPYAEIETEAVLSIDDDITMLTPDELEFGFEYWNYMYTAHMPTPIRTYVDSHMNCEDIAMNFLVAHITAKAPFIHSIRAHCTASGIEELL
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query176 2.2.26 [Sep-21-2011]
Q9Y169717 Exostosin-2 OS=Drosophila yes N/A 0.75 0.184 0.5 1e-40
P70428718 Exostosin-2 OS=Mus muscul yes N/A 0.744 0.182 0.474 1e-39
Q93063718 Exostosin-2 OS=Homo sapie yes N/A 0.744 0.182 0.474 1e-39
O77783718 Exostosin-2 OS=Bos taurus yes N/A 0.744 0.182 0.474 1e-39
Q9WVL6918 Exostosin-like 3 OS=Mus m no N/A 0.738 0.141 0.355 2e-21
O43909919 Exostosin-like 3 OS=Homo no N/A 0.738 0.141 0.355 2e-21
O01705814 Exostosin-2 OS=Caenorhabd yes N/A 0.681 0.147 0.355 5e-20
Q9XZ08972 Exostosin-3 OS=Drosophila no N/A 0.738 0.133 0.335 1e-17
Q5IGR6737 Exostosin-1c OS=Danio rer no N/A 0.687 0.164 0.296 2e-14
Q5IGR8730 Exostosin-1a OS=Danio rer no N/A 0.744 0.179 0.281 1e-13
>sp|Q9Y169|EXT2_DROME Exostosin-2 OS=Drosophila melanogaster GN=Ext2 PE=1 SV=1 Back     alignment and function desciption
 Score =  165 bits (418), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 90/180 (50%), Positives = 107/180 (59%), Gaps = 48/180 (26%)

Query: 27  DRVHSLFLLMEQLALVPSVSKILVIWNNQAKSPPPVSKWPKISKSWTIIRTDENKLSKRF 86
           DRV SLFLL+++LA+VPS+  ILVIWNNQ KSPP +S +P ISK   I +T ENKLS RF
Sbjct: 463 DRVESLFLLIQKLAVVPSLQSILVIWNNQKKSPPHLSTFPSISKPLKIRQTKENKLSNRF 522

Query: 87  YPYAEIETEAVLSIDDDITMLTPDELEFGFE----------------------------- 117
           YPY EIETEA+L+IDDDI MLT DEL+FG+E                             
Sbjct: 523 YPYPEIETEAILTIDDDIIMLTTDELDFGYEVWREFPDHIVGFPSRIHVWENVTMRWHYE 582

Query: 118 -------------------YWNYMYTAHMPTPIRTYVDSHMNCEDIAMNFLVAHITAKAP 158
                              YW++MYT  MP  I+ +VD HMNCEDIAMNFLVA+IT   P
Sbjct: 583 SEWTNQISMVLTGAAFHHKYWSHMYTHAMPGDIKDWVDEHMNCEDIAMNFLVANITNNPP 642
Glycosyltransferase required for the biosynthesis of heparan-sulfate and responsible for the alternating addition of beta-1-4-linked glucuronic acid (GlcA) and alpha-1-4-linked N-acetylglucosamine (GlcNAc) units to nascent heparan sulfate chains. Plays a central role in diffusion of morphogens hedgehog (hh), wingless (wg) and Decapentaplegic (dpp) via its role in heparan sulfate proteoglycans (HSPGs) biosynthesis, HSPGs being required for movement of Hh, Dpp and wg morphogens.
Drosophila melanogaster (taxid: 7227)
EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: 2EC: 2EC: 5
>sp|P70428|EXT2_MOUSE Exostosin-2 OS=Mus musculus GN=Ext2 PE=1 SV=2 Back     alignment and function description
>sp|Q93063|EXT2_HUMAN Exostosin-2 OS=Homo sapiens GN=EXT2 PE=1 SV=1 Back     alignment and function description
>sp|O77783|EXT2_BOVIN Exostosin-2 OS=Bos taurus GN=EXT2 PE=1 SV=1 Back     alignment and function description
>sp|Q9WVL6|EXTL3_MOUSE Exostosin-like 3 OS=Mus musculus GN=Extl3 PE=2 SV=2 Back     alignment and function description
>sp|O43909|EXTL3_HUMAN Exostosin-like 3 OS=Homo sapiens GN=EXTL3 PE=2 SV=1 Back     alignment and function description
>sp|O01705|EXT2_CAEEL Exostosin-2 OS=Caenorhabditis elegans GN=rib-2 PE=2 SV=2 Back     alignment and function description
>sp|Q9XZ08|EXT3_DROME Exostosin-3 OS=Drosophila melanogaster GN=botv PE=1 SV=1 Back     alignment and function description
>sp|Q5IGR6|EXT1C_DANRE Exostosin-1c OS=Danio rerio GN=ext1c PE=2 SV=1 Back     alignment and function description
>sp|Q5IGR8|EXT1A_DANRE Exostosin-1a OS=Danio rerio GN=ext1a PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query176
157820411 670 exostosin-2 [Rattus norvegicus] gi|14902 0.744 0.195 0.648 5e-45
348558689 669 PREDICTED: exostosin-2-like isoform 2 [C 0.744 0.195 0.648 7e-45
242020116 696 Exostosin-2, putative [Pediculus humanus 0.75 0.189 0.533 2e-43
307176975 563 Exostosin-2 [Camponotus floridanus] 0.75 0.234 0.5 6e-42
380025736 700 PREDICTED: LOW QUALITY PROTEIN: exostosi 0.75 0.188 0.516 9e-42
328788198 708 PREDICTED: exostosin-2 [Apis mellifera] 0.75 0.186 0.511 1e-41
307215037 594 Exostosin-2 [Harpegnathos saltator] 0.75 0.222 0.511 2e-41
322790909 676 hypothetical protein SINV_11283 [Solenop 0.755 0.196 0.508 2e-41
332030617 594 Exostosin-2 [Acromyrmex echinatior] 0.755 0.223 0.508 2e-41
340727245 710 PREDICTED: exostosin-2-like isoform 2 [B 0.75 0.185 0.511 3e-41
>gi|157820411|ref|NP_001101221.1| exostosin-2 [Rattus norvegicus] gi|149022701|gb|EDL79595.1| exostoses (multiple) 2 (predicted) [Rattus norvegicus] Back     alignment and taxonomy information
 Score =  185 bits (470), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 85/131 (64%), Positives = 107/131 (81%)

Query: 27  DRVHSLFLLMEQLALVPSVSKILVIWNNQAKSPPPVSKWPKISKSWTIIRTDENKLSKRF 86
           DRV SLF ++ +++ VPS+SK+LV+WNNQ K+PP  S WPKI     ++RT ENKLS RF
Sbjct: 464 DRVESLFRVITEVSKVPSLSKLLVVWNNQNKNPPEESLWPKIRVPLKVVRTAENKLSNRF 523

Query: 87  YPYAEIETEAVLSIDDDITMLTPDELEFGFEYWNYMYTAHMPTPIRTYVDSHMNCEDIAM 146
           +PY EIETEAVL+IDDDI MLT DEL+FG+EY+NY+YT  MP  I+ +VD+HMNCEDIAM
Sbjct: 524 FPYDEIETEAVLAIDDDIIMLTSDELQFGYEYFNYLYTYKMPGDIKNWVDAHMNCEDIAM 583

Query: 147 NFLVAHITAKA 157
           NFLVA++T KA
Sbjct: 584 NFLVANVTGKA 594

Source: Rattus norvegicus

Species: Rattus norvegicus

Genus: Rattus

Family: Muridae

Order: Rodentia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota
>gi|348558689|ref|XP_003465149.1| PREDICTED: exostosin-2-like isoform 2 [Cavia porcellus] Back     alignment and taxonomy information
>gi|242020116|ref|XP_002430502.1| Exostosin-2, putative [Pediculus humanus corporis] gi|212515659|gb|EEB17764.1| Exostosin-2, putative [Pediculus humanus corporis] Back     alignment and taxonomy information
>gi|307176975|gb|EFN66281.1| Exostosin-2 [Camponotus floridanus] Back     alignment and taxonomy information
>gi|380025736|ref|XP_003696624.1| PREDICTED: LOW QUALITY PROTEIN: exostosin-2-like [Apis florea] Back     alignment and taxonomy information
>gi|328788198|ref|XP_001121972.2| PREDICTED: exostosin-2 [Apis mellifera] Back     alignment and taxonomy information
>gi|307215037|gb|EFN89864.1| Exostosin-2 [Harpegnathos saltator] Back     alignment and taxonomy information
>gi|322790909|gb|EFZ15575.1| hypothetical protein SINV_11283 [Solenopsis invicta] Back     alignment and taxonomy information
>gi|332030617|gb|EGI70305.1| Exostosin-2 [Acromyrmex echinatior] Back     alignment and taxonomy information
>gi|340727245|ref|XP_003401958.1| PREDICTED: exostosin-2-like isoform 2 [Bombus terrestris] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query176
FB|FBgn0029175 717 Ext2 "Ext2" [Drosophila melano 0.619 0.152 0.614 2.4e-29
MGI|MGI:108050 718 Ext2 "exostoses (multiple) 2" 0.647 0.158 0.556 3.7e-28
UNIPROTKB|E9PTT2 718 Ext2 "Protein Ext2" [Rattus no 0.647 0.158 0.556 3.7e-28
UNIPROTKB|A0JN91 718 EXT2 "Exostoses (Multiple) 2" 0.647 0.158 0.556 4.7e-28
UNIPROTKB|O77783 718 EXT2 "Exostosin-2" [Bos taurus 0.647 0.158 0.556 4.7e-28
UNIPROTKB|Q93063 718 EXT2 "Exostosin-2" [Homo sapie 0.647 0.158 0.556 4.7e-28
UNIPROTKB|F1NR24 719 EXT2 "Uncharacterized protein" 0.647 0.158 0.556 4.7e-28
UNIPROTKB|F1SHI1 728 EXT2 "Uncharacterized protein" 0.636 0.153 0.553 1e-27
UNIPROTKB|E2RKC6 733 EXT2 "Uncharacterized protein" 0.636 0.152 0.553 1e-27
ZFIN|ZDB-GENE-041124-3 719 ext2 "exostoses (multiple) 2" 0.636 0.155 0.526 1.3e-27
FB|FBgn0029175 Ext2 "Ext2" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 334 (122.6 bits), Expect = 2.4e-29, P = 2.4e-29
 Identities = 67/109 (61%), Positives = 81/109 (74%)

Query:    27 DRVHSLFLLMEQLALVPSVSKILVIWNNQAKSPPPVSKWPKISKSWTIIRTDENKLSKRF 86
             DRV SLFLL+++LA+VPS+  ILVIWNNQ KSPP +S +P ISK   I +T ENKLS RF
Sbjct:   463 DRVESLFLLIQKLAVVPSLQSILVIWNNQKKSPPHLSTFPSISKPLKIRQTKENKLSNRF 522

Query:    87 YPYAEIETEAVLSIDDDITMLTPDELEFGFEYWNYMYTAHMPTPIRTYV 135
             YPY EIETEA+L+IDDDI MLT DEL+FG+E W       +  P R +V
Sbjct:   523 YPYPEIETEAILTIDDDIIMLTTDELDFGYEVWREFPDHIVGFPSRIHV 571
GO:0008375 "acetylglucosaminyltransferase activity" evidence=ISS;NAS
GO:0015012 "heparan sulfate proteoglycan biosynthetic process" evidence=IDA;NAS
GO:0015020 "glucuronosyltransferase activity" evidence=NAS
GO:0015014 "heparan sulfate proteoglycan biosynthetic process, polysaccharide chain biosynthetic process" evidence=IMP
GO:0031227 "intrinsic to endoplasmic reticulum membrane" evidence=IEA
GO:0008101 "decapentaplegic signaling pathway" evidence=IMP
GO:0005794 "Golgi apparatus" evidence=IDA
GO:0007224 "smoothened signaling pathway" evidence=IMP
GO:0005783 "endoplasmic reticulum" evidence=IDA
GO:0006024 "glycosaminoglycan biosynthetic process" evidence=IMP
GO:0016055 "Wnt receptor signaling pathway" evidence=IMP
GO:0005515 "protein binding" evidence=IPI
GO:0030210 "heparin biosynthetic process" evidence=IMP
GO:0030206 "chondroitin sulfate biosynthetic process" evidence=IMP
GO:0050508 "glucuronosyl-N-acetylglucosaminyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase activity" evidence=ISS
GO:0006044 "N-acetylglucosamine metabolic process" evidence=ISS
GO:0050509 "N-acetylglucosaminyl-proteoglycan 4-beta-glucuronosyltransferase activity" evidence=ISS
MGI|MGI:108050 Ext2 "exostoses (multiple) 2" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|E9PTT2 Ext2 "Protein Ext2" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|A0JN91 EXT2 "Exostoses (Multiple) 2" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|O77783 EXT2 "Exostosin-2" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|Q93063 EXT2 "Exostosin-2" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|F1NR24 EXT2 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|F1SHI1 EXT2 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|E2RKC6 EXT2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-041124-3 ext2 "exostoses (multiple) 2" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.4.1LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query176
pfam09258244 pfam09258, Glyco_transf_64, Glycosyl transferase f 2e-47
>gnl|CDD|220155 pfam09258, Glyco_transf_64, Glycosyl transferase family 64 domain Back     alignment and domain information 
 Score =  154 bits (391), Expect = 2e-47
 Identities = 69/180 (38%), Positives = 89/180 (49%), Gaps = 50/180 (27%)

Query: 27  DRVHSLFLLMEQLALVPSVSKILVIWNNQAKSPPPVSKWPKISKSWTIIRTDENKLSKRF 86
            R+  L  L+   A  P ++KI+V+WNN  K PP +SKWP  +   T+IRT  N L+ RF
Sbjct: 10  SRIDLLRKLLNHYAGSPHLAKIVVLWNNP-KPPPELSKWPSPAVPLTVIRTKRNSLNNRF 68

Query: 87  YPYAEIETEAVLSIDDDITMLTPDELEFGFE----------------------------- 117
            PY EIET+AVLS+DDDI +L+ DEL+F F                              
Sbjct: 69  LPYPEIETDAVLSLDDDI-LLSTDELDFAFSVWQSFPDRIVGFPPRSHFWDLSKGRWGYT 127

Query: 118 -------------------YWNYMYTAHMPTPIRTYVDSHMNCEDIAMNFLVAHITAKAP 158
                              Y+ Y+YT  +P  IR  VD   NCEDI MNFLVA++T K P
Sbjct: 128 SEWTNDYSMVLTGAAFYHRYYLYLYTHSLPKSIRDLVDETRNCEDILMNFLVANVTGKPP 187

Members of this family catalyze the transfer reaction of N-acetylglucosamine and N-acetylgalactosamine from the respective UDP-sugars to the non-reducing end of [glucuronic acid]beta 1-3[galactose]beta 1-O-naphthalenemethanol, an acceptor substrate analog of the natural common linker of various glycosylaminoglycans. They are also required for the biosynthesis of heparan-sulphate. Length = 244

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 176
KOG1022|consensus691 100.0
PF09258247 Glyco_transf_64: Glycosyl transferase family 64 do 100.0
KOG2264|consensus907 100.0
cd04184202 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like prot 96.4
PF00535169 Glycos_transf_2: Glycosyl transferase family 2; In 96.38
cd06439251 CESA_like_1 CESA_like_1 is a member of the cellulo 96.26
cd06437232 CESA_CaSu_A2 Cellulose synthase catalytic subunit 95.91
PF13641228 Glyco_tranf_2_3: Glycosyltransferase like family 2 95.83
cd02525249 Succinoglycan_BP_ExoA ExoA is involved in the bios 95.79
cd06434235 GT2_HAS Hyaluronan synthases catalyze polymerizati 95.58
cd04186166 GT_2_like_c Subfamily of Glycosyltransferase Famil 95.49
cd06423180 CESA_like CESA_like is the cellulose synthase supe 95.23
cd06421234 CESA_CelA_like CESA_CelA_like are involved in the 95.18
cd04192229 GT_2_like_e Subfamily of Glycosyltransferase Famil 94.9
cd04185202 GT_2_like_b Subfamily of Glycosyltransferase Famil 94.85
cd02522221 GT_2_like_a GT_2_like_a represents a glycosyltrans 94.25
PRK11204 420 N-glycosyltransferase; Provisional 93.35
cd02511229 Beta4Glucosyltransferase UDP-glucose LOS-beta-1,4 93.02
cd06433202 GT_2_WfgS_like WfgS and WfeV are involved in O-ant 92.92
cd02510 299 pp-GalNAc-T pp-GalNAc-T initiates the formation of 92.84
cd02526237 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl tr 92.82
cd02514 334 GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an es 91.72
cd06420182 GT2_Chondriotin_Pol_N N-terminal domain of Chondro 91.66
cd04196214 GT_2_like_d Subfamily of Glycosyltransferase Famil 91.29
cd06442224 DPM1_like DPM1_like represents putative enzymes si 91.28
TIGR03472 373 HpnI hopanoid biosynthesis associated glycosyl tra 90.68
cd02520196 Glucosylceramide_synthase Glucosylceramide synthas 90.65
cd00761156 Glyco_tranf_GTA_type Glycosyltransferase family A 90.05
TIGR03111 439 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR0 89.47
cd06435236 CESA_NdvC_like NdvC_like proteins in this family a 88.86
cd04195201 GT2_AmsE_like GT2_AmsE_like is involved in exopoly 88.53
cd04179185 DPM_DPG-synthase_like DPM_DPG-synthase_like is a m 88.44
TIGR01556 281 rhamnosyltran L-rhamnosyltransferase. Rhamnolipids 88.42
COG0463 291 WcaA Glycosyltransferases involved in cell wall bi 87.59
TIGR03469 384 HonB hopene-associated glycosyltransferase HpnB. T 87.53
cd06913219 beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltran 86.95
PRK10073 328 putative glycosyl transferase; Provisional 86.57
COG1216 305 Predicted glycosyltransferases [General function p 86.19
PRK10018 279 putative glycosyl transferase; Provisional 86.17
cd04187181 DPM1_like_bac Bacterial DPM1_like enzymes are rela 83.92
cd06427241 CESA_like_2 CESA_like_2 is a member of the cellulo 82.27
PRK10714 325 undecaprenyl phosphate 4-deoxy-4-formamido-L-arabi 81.65
>KOG1022|consensus Back     alignment and domain information 
Probab=100.00  E-value=7.1e-54  Score=391.24  Aligned_cols=160  Identities=48%  Similarity=0.740  Sum_probs=151.5

Q ss_pred             hhcCCCceEEEEeccCCchHHHHHHHHHhcCCCcceEEEEecCCCCCCCCCCCCCCCCCceEEEeCCCcccccccCCCCC
Q psy979           12 IAGSTVRKYIPHDCIDRVHSLFLLMEQLALVPSVSKILVIWNNQAKSPPPVSKWPKISKSWTIIRTDENKLSKRFYPYAE   91 (176)
Q Consensus        12 ~~~~~~r~~i~i~Ty~R~~~L~~~l~~~~~~p~l~~IvVvWn~~~~~pP~~~~~p~~~vpV~v~~~~~nsLnnRF~P~~~   91 (176)
                      ++|....+|.+|+||+|.++|+++|+||++||+|+||+|||||.+..||+++.||.+++|+++++++.|||||||.|+++
T Consensus       438 ik~~~qgFTlim~TYdR~d~L~k~v~~ys~vPsL~kIlVVWNnq~k~PP~es~~~~~~VPlr~r~qkeNsLnNRF~~~pe  517 (691)
T KOG1022|consen  438 IKGHSQGFTLIMLTYDRVDLLKKLVKHYSRVPSLKKILVVWNNQGKNPPPESLEPDIAVPLRFRQQKENSLNNRFEPYPE  517 (691)
T ss_pred             CCCcccceeeeeehHHHHHHHHHHHHHHhhCCCcceEEEEecCCCCCCChhhccccCCccEEEEehhhhhhhcccccCcc
Confidence            57888999999999999999999999999999999999999999889999989999999999999999999999999999


Q ss_pred             CCcceEEEeeCCCCCCChHHHHHHhh------------------------------------------------hccccc
Q psy979           92 IETEAVLSIDDDITMLTPDELEFGFE------------------------------------------------YWNYMY  123 (176)
Q Consensus        92 I~T~AVlslDDDv~~l~~~eLeFaF~------------------------------------------------~y~~~Y  123 (176)
                      |||+|||++|||+.| .|+||+|||+                                                ||+++|
T Consensus       518 ieT~AVL~IDDDIim-~~ddldFgf~VWrefPD~lVGF~pR~H~~t~s~~k~~y~sewt~qySMVLtGAAFfhk~y~~lY  596 (691)
T KOG1022|consen  518 IETEAVLEIDDDIIM-PCDDLDFGFEVWREFPDRLVGFVPRFHVWTMSYSKWKYESEWTNQYSMVLTGAAFFHKKYLDLY  596 (691)
T ss_pred             cccceeEEecCceee-ecchhHHHHHHHHhCccceeccCcceeecccccchhhheeecCCceEEEEechhHHHHHHHHHh
Confidence            999999999999985 6999999999                                                678999


Q ss_pred             cccCcHhHHHHhcCCCChhHHHHHHHHHHhhCCCCeEeeeee-----eeccccc
Q psy979          124 TAHMPTPIRTYVDSHMNCEDIAMNFLVAHITAKAPFIHSIRA-----HCTASGI  172 (176)
Q Consensus       124 t~~lp~~ir~~VD~~~NCEDIaMNflVa~~T~~pPi~V~~r~-----~~~~~~~  172 (176)
                      ++.||+.+|++||++|||||||||||+|++||+|+|||++|+     .|++.++
T Consensus       597 t~~mPa~ir~~vDe~~NCEDIAMNFLiANatg~~aI~Vkp~~~~~~~~~sg~~g  650 (691)
T KOG1022|consen  597 TSDMPADIRVFVDEHMNCEDIAMNFLIANATGKPAIKVKPRKKFKCPECSGVAG  650 (691)
T ss_pred             hhcccchHHHhhhcccCHHHHHHHHHhhhccCCCceEEeCcccccCccccccee
Confidence            999999999999999999999999999999999999999996     5555544

>PF09258 Glyco_transf_64: Glycosyl transferase family 64 domain; InterPro: IPR015338 Members of this entry catalyse the transfer reaction of N-acetylglucosamine and N-acetylgalactosamine from the respective UDP-sugars to the non-reducing end of [glucuronic acid]beta 1-3[galactose]beta 1-O-naphthalenemethanol, an acceptor substrate analogue of the natural common linker of various glycosylaminoglycans Back     alignment and domain information
>KOG2264|consensus Back     alignment and domain information
>cd04184 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like proteins are required for O-antigen biosynthesis Back     alignment and domain information
>PF00535 Glycos_transf_2: Glycosyl transferase family 2; InterPro: IPR001173 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information
>cd06439 CESA_like_1 CESA_like_1 is a member of the cellulose synthase (CESA) superfamily Back     alignment and domain information
>cd06437 CESA_CaSu_A2 Cellulose synthase catalytic subunit A2 (CESA2) is a catalytic subunit or a catalytic subunit substitute of the cellulose synthase complex Back     alignment and domain information
>PF13641 Glyco_tranf_2_3: Glycosyltransferase like family 2; PDB: 4FIY_B 4FIX_A Back     alignment and domain information
>cd02525 Succinoglycan_BP_ExoA ExoA is involved in the biosynthesis of succinoglycan Back     alignment and domain information
>cd06434 GT2_HAS Hyaluronan synthases catalyze polymerization of hyaluronan Back     alignment and domain information
>cd04186 GT_2_like_c Subfamily of Glycosyltransferase Family GT2 of unknown function Back     alignment and domain information
>cd06423 CESA_like CESA_like is the cellulose synthase superfamily Back     alignment and domain information
>cd06421 CESA_CelA_like CESA_CelA_like are involved in the elongation of the glucan chain of cellulose Back     alignment and domain information
>cd04192 GT_2_like_e Subfamily of Glycosyltransferase Family GT2 of unknown function Back     alignment and domain information
>cd04185 GT_2_like_b Subfamily of Glycosyltransferase Family GT2 of unknown function Back     alignment and domain information
>cd02522 GT_2_like_a GT_2_like_a represents a glycosyltransferase family-2 subfamily with unknown function Back     alignment and domain information
>PRK11204 N-glycosyltransferase; Provisional Back     alignment and domain information
>cd02511 Beta4Glucosyltransferase UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide Back     alignment and domain information
>cd06433 GT_2_WfgS_like WfgS and WfeV are involved in O-antigen biosynthesis Back     alignment and domain information
>cd02510 pp-GalNAc-T pp-GalNAc-T initiates the formation of mucin-type O-linked glycans Back     alignment and domain information
>cd02526 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl transferase Back     alignment and domain information
>cd02514 GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides Back     alignment and domain information
>cd06420 GT2_Chondriotin_Pol_N N-terminal domain of Chondroitin polymerase functions as a GalNAc transferase Back     alignment and domain information
>cd04196 GT_2_like_d Subfamily of Glycosyltransferase Family GT2 of unknown function Back     alignment and domain information
>cd06442 DPM1_like DPM1_like represents putative enzymes similar to eukaryotic DPM1 Back     alignment and domain information
>TIGR03472 HpnI hopanoid biosynthesis associated glycosyl transferase protein HpnI Back     alignment and domain information
>cd02520 Glucosylceramide_synthase Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis Back     alignment and domain information
>cd00761 Glyco_tranf_GTA_type Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold Back     alignment and domain information
>TIGR03111 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR03111 Back     alignment and domain information
>cd06435 CESA_NdvC_like NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase Back     alignment and domain information
>cd04195 GT2_AmsE_like GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis Back     alignment and domain information
>cd04179 DPM_DPG-synthase_like DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily Back     alignment and domain information
>TIGR01556 rhamnosyltran L-rhamnosyltransferase Back     alignment and domain information
>COG0463 WcaA Glycosyltransferases involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>TIGR03469 HonB hopene-associated glycosyltransferase HpnB Back     alignment and domain information
>cd06913 beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltransferase is essential for the formation of poly-N-acetyllactosamine Back     alignment and domain information
>PRK10073 putative glycosyl transferase; Provisional Back     alignment and domain information
>COG1216 Predicted glycosyltransferases [General function prediction only] Back     alignment and domain information
>PRK10018 putative glycosyl transferase; Provisional Back     alignment and domain information
>cd04187 DPM1_like_bac Bacterial DPM1_like enzymes are related to eukaryotic DPM1 Back     alignment and domain information
>cd06427 CESA_like_2 CESA_like_2 is a member of the cellulose synthase superfamily Back     alignment and domain information
>PRK10714 undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query176
1omx_A293 Crystal Structure Of Mouse Alpha-1,4-N- Acetylhexos 3e-09
>pdb|1OMX|A Chain A, Crystal Structure Of Mouse Alpha-1,4-N- Acetylhexosaminyltransferase (Extl2) Length = 293 Back     alignment and structure 
Iteration: 1

 Score = 57.8 bits (138), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 50/194 (25%), Positives = 69/194 (35%), Gaps = 73/194 (37%)
Query: 27  DRVHSLFLLMEQLALVPSVSKILVIWNNQAKSPP----------PVSKWPKISKSWTIIR 76
           +R   L  L+     VPS+ K++V+WNN  +  P          P+   P I K  T   
Sbjct: 38  NRTDLLLRLLNHYQAVPSLHKVIVVWNNVGEKGPEELWNSLGPHPI---PVIFKPQT--- 91
Query: 77  TDENKLSKRFYPYAEIETEAVLSIDDDITMLTPDELEFGFEYWN---------------- 120
              NK+  R   + E+ET AVL +DDD T+++  +L F F  W                 
Sbjct: 92  --ANKMRNRLQVFPEVETNAVLMVDDD-TLISAQDLVFAFSIWQQFPDQIIGFVPRKHVS 148
Query: 121 -----YMYTA---------------------------------HMPTPIRTYVDSHMNCE 142
                Y Y                                     P  +   +D   NC+
Sbjct: 149 TSSGIYSYGGFELQTPGPGNGDQYSMVLIGASFFNSKYLELFQKQPAAVHALIDETQNCD 208
Query: 143 DIAMNFLVAHITAK 156
           DIAMNFLV   T K
Sbjct: 209 DIAMNFLVTRHTGK 222

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query176
1omz_A293 Alpha-1,4-N-acetylhexosaminyltransferase EXTL2; ro 2e-36
>1omz_A Alpha-1,4-N-acetylhexosaminyltransferase EXTL2; rossmann fold, DXD motif; HET: UD2; 2.10A {Mus musculus} SCOP: c.68.1.15 PDB: 1omx_A* 1on6_A* 1on8_A* Length = 293 Back     alignment and structure
 Score =  127 bits (319), Expect = 2e-36
 Identities = 46/191 (24%), Positives = 64/191 (33%), Gaps = 59/191 (30%)

Query: 27  DRVHSLFLLMEQLALVPSVSKILVIWNNQAKSPPPVSKWPKISKSW---TIIRTDENKLS 83
           +R   L  L+     VPS+ K++V+WNN      P   W  +              NK+ 
Sbjct: 38  NRTDLLLRLLNHYQAVPSLHKVIVVWNNV-GEKGPEELWNSLGPHPIPVIFKPQTANKMR 96

Query: 84  KRFYPYAEIETEAVLSIDDDITMLTPDELEFGFEYW---------------------NYM 122
            R   + E+ET AVL +DDD  +++  +L F F  W                      Y 
Sbjct: 97  NRLQVFPEVETNAVLMVDDDT-LISAQDLVFAFSIWQQFPDQIIGFVPRKHVSTSSGIYS 155

Query: 123 YT---------------------------------AHMPTPIRTYVDSHMNCEDIAMNFL 149
           Y                                     P  +   +D   NC+DIAMNFL
Sbjct: 156 YGGFELQTPGPGNGDQYSMVLIGASFFNSKYLELFQKQPAAVHALIDETQNCDDIAMNFL 215

Query: 150 VAHITAKAPFI 160
           V   T K   I
Sbjct: 216 VTRHTGKPSGI 226

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query176
1omz_A293 Alpha-1,4-N-acetylhexosaminyltransferase EXTL2; ro 100.0
1qg8_A255 Protein (spore coat polysaccharide biosynthesis P 95.2
3bcv_A240 Putative glycosyltransferase protein; protein stru 94.95
2ffu_A 501 Ppgalnact-2, polypeptide N-acetylgalactosaminyltra 93.96
1xhb_A 472 Polypeptide N-acetylgalactosaminyltransferase 1; g 93.8
2z86_A 625 Chondroitin synthase; GT-A, glycosyltransferase A, 92.93
2d7i_A 570 Polypeptide N-acetylgalactosaminyltransferase 10; 92.25
4fix_A 657 UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 91.64
2z86_A625 Chondroitin synthase; GT-A, glycosyltransferase A, 80.84
3l7i_A 729 Teichoic acid biosynthesis protein F; GT-B fold, m 80.11
>1omz_A Alpha-1,4-N-acetylhexosaminyltransferase EXTL2; rossmann fold, DXD motif; HET: UD2; 2.10A {Mus musculus} SCOP: c.68.1.15 PDB: 1omx_A* 1on6_A* 1on8_A* Back     alignment and structure
Probab=100.00  E-value=2.8e-52  Score=360.36  Aligned_cols=147  Identities=29%  Similarity=0.525  Sum_probs=132.6

Q ss_pred             cCCCceEEEEeccCCchHHHHHHHHHhcCCCcceEEEEecCCCCCCCCCCCCCCC---CCceEEEeCCCcccccccCCCC
Q psy979           14 GSTVRKYIPHDCIDRVHSLFLLMEQLALVPSVSKILVIWNNQAKSPPPVSKWPKI---SKSWTIIRTDENKLSKRFYPYA   90 (176)
Q Consensus        14 ~~~~r~~i~i~Ty~R~~~L~~~l~~~~~~p~l~~IvVvWn~~~~~pP~~~~~p~~---~vpV~v~~~~~nsLnnRF~P~~   90 (176)
                      ...+++|++|+||+|.++|+++|+||++||+|+||+||||+++.+|| ...||.+   .+||+|+++++|||||||+|++
T Consensus        25 ~~~~~FTvvi~ty~R~~~L~~lv~~~~~~~~v~~IvVvWn~~~~~pp-~~~~~~~~~~~vpv~v~~~~~nsLnnRF~p~~  103 (293)
T 1omz_A           25 SALDSFTLIMQTYNRTDLLLRLLNHYQAVPSLHKVIVVWNNVGEKGP-EELWNSLGPHPIPVIFKPQTANKMRNRLQVFP  103 (293)
T ss_dssp             -CTTCEEEEEEESSCHHHHHHHHHHHTTSTTEEEEEEEECCTTCCCT-HHHHHHTCCCSSCEEEEECSSCCGGGGGSCCT
T ss_pred             CCCCceEEEEEeecccHHHHHHHHHHhcCCCCCeEEEEeCCCCCCCC-hhhccccCCCCccEEEEeCCCCchhhccCCCc
Confidence            34679999999999999999999999999999999999999865444 4568665   6999999999999999999999


Q ss_pred             CCCcceEEEeeCCCCCCChHHHHHHhh-----------------------------------------------------
Q psy979           91 EIETEAVLSIDDDITMLTPDELEFGFE-----------------------------------------------------  117 (176)
Q Consensus        91 ~I~T~AVlslDDDv~~l~~~eLeFaF~-----------------------------------------------------  117 (176)
                      +|+|+|||++|||+. ++|+||+|||+                                                     
T Consensus       104 ~i~T~AVLslDDDv~-l~~~el~faF~vWr~~PdRlVGf~~R~H~~~~~~~w~Y~~~~~~~p~~~~~~~YSmVLTgaAF~  182 (293)
T 1omz_A          104 EVETNAVLMVDDDTL-ISAQDLVFAFSIWQQFPDQIIGFVPRKHVSTSSGIYSYGGFELQTPGPGNGDQYSMVLIGASFF  182 (293)
T ss_dssp             TCCSSEEEEECTTEE-ECHHHHHHHHHHHTTSTTSEEESCEEEEEEEETTEEEEECTTSCCCSSSSSCCBSEECTTEEEE
T ss_pred             cCCcCEEEEEcCCCC-CCHHHHHHHHHHHHHCccceecCchhhhccCCCCccccccccccccccCCCCeEEEEECchHHh
Confidence            999999999999995 89999999999                                                     


Q ss_pred             --hccccccccCcHhHHHHhcCCCChhHHHHHHHHHHhhCCCC-eEeee
Q psy979          118 --YWNYMYTAHMPTPIRTYVDSHMNCEDIAMNFLVAHITAKAP-FIHSI  163 (176)
Q Consensus       118 --~y~~~Yt~~lp~~ir~~VD~~~NCEDIaMNflVa~~T~~pP-i~V~~  163 (176)
                        ||+++|+ .+|+++|+|||+++||||||||||||++||+|| ++|++
T Consensus       183 Hr~Yl~lyt-~~p~~ir~~VDe~~NCEDIaMNFlVA~~T~~pP~i~vk~  230 (293)
T 1omz_A          183 NSKYLELFQ-KQPAAVHALIDETQNCDDIAMNFLVTRHTGKPSGIFVKP  230 (293)
T ss_dssp             ETHHHHHHH-TSCHHHHHHHHHHTCCHHHHHHHHHHHHHSSCSEEEECC
T ss_pred             ccHHHHHHH-HhHHHHHHHHhccCchHHHHHHHHHHHHhCCCCcceecc
Confidence              4556777 599999999999999999999999999999999 65653
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A* Back     alignment and structure
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis} Back     alignment and structure
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A* Back     alignment and structure
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17 Back     alignment and structure
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A* Back     alignment and structure
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A* Back     alignment and structure
>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A* Back     alignment and structure
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A* Back     alignment and structure
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 176
d1omza_ 265 c.68.1.15 (A:) Alpha-1,4-N-acetylhexosaminyltransf 7e-09
>d1omza_ c.68.1.15 (A:) Alpha-1,4-N-acetylhexosaminyltransferase (Alpha-GalNAcT EXTL2) {Mouse (Mus musculus) [TaxId: 10090]} Length = 265 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: Exostosin
domain: Alpha-1,4-N-acetylhexosaminyltransferase (Alpha-GalNAcT EXTL2)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 51.2 bits (121), Expect = 7e-09
 Identities = 31/120 (25%), Positives = 50/120 (41%), Gaps = 5/120 (4%)

Query: 25  CIDRVHSLFLLMEQLALVPSVSKILVIWNNQAKSPPPVSKWPKISKSWTIIR---TDENK 81
             +R   L  L+     VPS+ K++V+WNN      P   W  +      +       NK
Sbjct: 11  TYNRTDLLLRLLNHYQAVPSLHKVIVVWNNV-GEKGPEELWNSLGPHPIPVIFKPQTANK 69

Query: 82  LSKRFYPYAEIETEAVLSIDDDITMLTPDELEFGFEYWNYMYTAHMPTPIRTYVDSHMNC 141
           +  R   + E+ET AVL +DDD  +++  +L F F  W       +    R +V +    
Sbjct: 70  MRNRLQVFPEVETNAVLMVDDDT-LISAQDLVFAFSIWQQFPDQIIGFVPRKHVSTSSGI 128

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query176
d1omza_265 Alpha-1,4-N-acetylhexosaminyltransferase (Alpha-Ga 99.47
d1xhba2 328 Polypeptide N-acetylgalactosaminyltransferase 1, N 94.56
d1qg8a_255 Spore coat polysaccharide biosynthesis protein Sps 93.67
>d1omza_ c.68.1.15 (A:) Alpha-1,4-N-acetylhexosaminyltransferase (Alpha-GalNAcT EXTL2) {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: Exostosin
domain: Alpha-1,4-N-acetylhexosaminyltransferase (Alpha-GalNAcT EXTL2)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.47  E-value=2.3e-13  Score=102.28  Aligned_cols=147  Identities=29%  Similarity=0.504  Sum_probs=110.3

Q ss_pred             CCceEEEEeccCCchHHHHHHHHHhcCCCcceEEEEecCCCCCCCCC--CCCCCCCCceEEEeCCCcccccccCCCCCCC
Q psy979           16 TVRKYIPHDCIDRVHSLFLLMEQLALVPSVSKILVIWNNQAKSPPPV--SKWPKISKSWTIIRTDENKLSKRFYPYAEIE   93 (176)
Q Consensus        16 ~~r~~i~i~Ty~R~~~L~~~l~~~~~~p~l~~IvVvWn~~~~~pP~~--~~~p~~~vpV~v~~~~~nsLnnRF~P~~~I~   93 (176)
                      =+++||+|.||+|.+.|.+.|+++.+.++..+|+||||+.+...+..  ..+......+.+.....+...+|.......+
T Consensus         2 ~~~~tvii~tyn~~~~l~~~l~sl~~q~~~~~~iiV~d~~sd~~~~~i~~~~~~~~~~~~~~~~~~g~~~a~n~~~~~a~   81 (265)
T d1omza_           2 LDSFTLIMQTYNRTDLLLRLLNHYQAVPSLHKVIVVWNNVGEKGPEELWNSLGPHPIPVIFKPQTANKMRNRLQVFPEVE   81 (265)
T ss_dssp             TTCEEEEEEESSCHHHHHHHHHHHTTSTTEEEEEEEECCTTCCCTHHHHHHTCCCSSCEEEEECSSCCGGGGGSCCTTCC
T ss_pred             CCcEEEEEEcCCCHHHHHHHHHHHHcCCCcCeEEEEECCCCCccHHHHHHHhcccceEEEEecCCCCchhhhhhhHHhCC
Confidence            37899999999999999999999999999999999999964322210  1122333445555555667899999999999


Q ss_pred             cceEEEeeCCCCCCChHHHHHHhhhcc------------------------c-----------------------ccc--
Q psy979           94 TEAVLSIDDDITMLTPDELEFGFEYWN------------------------Y-----------------------MYT--  124 (176)
Q Consensus        94 T~AVlslDDDv~~l~~~eLeFaF~~y~------------------------~-----------------------~Yt--  124 (176)
                      +|.|+.+|||.. +.++.|+...+.+.                        .                       .+.  
T Consensus        82 ge~i~~lD~D~~-~~~~~l~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~  160 (265)
T d1omza_          82 TNAVLMVDDDTL-ISAQDLVFAFSIWQQFPDQIIGFVPRKHVSTSSGIYSYGGFELQTPGPGNGDQYSMVLIGASFFNSK  160 (265)
T ss_dssp             SSEEEEECTTEE-ECHHHHHHHHHHHTTSTTSEEESCEEEEEEEETTEEEEECTTSCCCSSSSSCCBSEECTTEEEEETH
T ss_pred             cCEEEEeCcccC-CCHHHHHHHHHHHHhCCCcceecccccccccCCcccccccccccccccccccccceeccceeEecHH
Confidence            999999999996 79999998877110                        0                       000  


Q ss_pred             -----ccCcHhHHHHhcCCCChhHHHHHHHHHHhhCCCCeEeee
Q psy979          125 -----AHMPTPIRTYVDSHMNCEDIAMNFLVAHITAKAPFIHSI  163 (176)
Q Consensus       125 -----~~lp~~ir~~VD~~~NCEDIaMNflVa~~T~~pPi~V~~  163 (176)
                           .........+.++...|+|+.|.+......+++.+....
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~  204 (265)
T d1omza_         161 YLELFQKQPAAVHALIDETQNCDDIAMNFLVTRHTGKPSGIFVK  204 (265)
T ss_dssp             HHHHHHTSCHHHHHHHHHHTCCHHHHHHHHHHHHHSSCSEEEEC
T ss_pred             HHHHHhhhHHHHhhhhhhhcchHHHHHHHHHHHhcCCceeeeec
Confidence                 111234556778889999999999999999998865443
>d1xhba2 c.68.1.17 (A:95-422) Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1qg8a_ c.68.1.1 (A:) Spore coat polysaccharide biosynthesis protein SpsA {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure