ECOD: domain e1e3pA3

Domain ID e1e3pA3

A: a+b two layers
X: Ribonuclease PH domain 2-like
H: Ribonuclease PH domain 2
T: Ribonuclease PH domain 2
F: RNase_PH_C

UID:	000069791
Type:	Automatic domain
Parent:	e1e3hA2
Range:	A:483-578
Ligands:	SO4 WO4
PDB:	1e3p
PDB Description:	Polyribonucleotide nucleotidyltransferase
UniProt:	Q53597
Hsap BLAST neighbor:	Q8TCS8
Species:	Streptomyces antibioticus

Domains in the same chain:

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e1e3pA5	A:3-151	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like
e1e3pA7	A:152-262	Ribonuclease PH domain 2-like	Ribonuclease PH domain 2	Ribonuclease PH domain 2
e1e3pA2	A:263-345	HTH	Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3	Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3
e1e3pA6	A:346-482	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like
e1e3pA3	A:483-578	Ribonuclease PH domain 2-like	Ribonuclease PH domain 2	Ribonuclease PH domain 2
e1e3pA8	A:579-634	Alpha-lytic protease prodomain-like	KH-domains	Eukaryotic type KH-domain (KH-domain type I)
e1e3pA9	A:656-679,A:699-717	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins

Domains in the same PDB:

e1e3pA5	A:3-151	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like
e1e3pA7	A:152-262	Ribonuclease PH domain 2-like	Ribonuclease PH domain 2	Ribonuclease PH domain 2
e1e3pA2	A:263-345	HTH	Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3	Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3
e1e3pA6	A:346-482	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like
e1e3pA3	A:483-578	Ribonuclease PH domain 2-like	Ribonuclease PH domain 2	Ribonuclease PH domain 2
e1e3pA8	A:579-634	Alpha-lytic protease prodomain-like	KH-domains	Eukaryotic type KH-domain (KH-domain type I)
e1e3pA9	A:656-679,A:699-717	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins

Structural contacts of domain e1e3pA3 of H-group "Ribonuclease PH domain 2":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e1e3pA9	A:x,y,z->A:Y-1/3,X+1/3,-Z+1/3	Nucleic acid-binding proteins	Interaction Interface Pymol
e1e3pA9	A:Y-1/3,X+1/3,-Z+1/3->A:x,y,z	Nucleic acid-binding proteins	Interaction Interface Pymol