Domain ID e1p3dB3

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  • A: a/b three-layered sandwiches
  • X: MurD-like peptide ligases, peptide-binding domain
  • H: MurD-like peptide ligases, peptide-binding domain
  • T: MurD-like peptide ligases, peptide-binding domain
  • F: Mur_ligase_C
UID: 000110173
Type: Automatic domain
Parent: e1e8cA2
Range: B:322-473
Ligands: ANP UMA
PDB: 1p3d
PDB Description: UDP-N-ACETYLMURAMATE--ALANINE LIGASE
UniProt: P45066
Species: Haemophilus influenzae

Structure of domain e1p3dB3

Structural contacts of domain e1p3dB3 of H-group "MurD-like peptide ligases, peptide-binding domain":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1p3dA1 B:x,y,z->A:X-1,Y+1,Z Rossmann-related Interaction Interface Pymol
e1p3dA2 B:-X,Y-1/2,-Z+1->A:x,y,z P-loop domains-related Interaction Interface Pymol