ECOD: domain e2dsjB1

Domain ID e2dsjB1

A: alpha arrays
X: Nucleoside phosphorylase/phosphoribosyltransferase-N
H: Nucleoside phosphorylase/phosphoribosyltransferase-N
T: Nucleoside phosphorylase/phosphoribosyltransferase-N
F: Glycos_trans_3N

UID:	000312457
Type:	Automatic domain
Parent:	e1brwA1
Range:	B:1-70
Ligands:	CL
PDB:	2dsj
PDB Description:	PYRIMIDINE-NUCLEOSIDE (THYMIDINE) PHOSPHORYLASE
UniProt:	Q5SHF9
Hsap BLAST neighbor:	P19971
Species:

Domains in the same chain:

Download Pymol

e2dsjB1	B:1-70	Nucleoside phosphorylase/phosphoribosyltransferase-N	Nucleoside phosphorylase/phosphoribosyltransferase-N	Nucleoside phosphorylase/phosphoribosyltransferase-N
e2dsjB3	B:71-323	Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain	Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain	Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
e2dsjB2	B:324-423	alpha/beta-Hammerhead/Barrel-sandwich hybrid	alpha/beta-Hammerhead/Barrel-sandwich hybrid	Pyrimidine nucleoside phosphorylase C-terminal domain

Domains in the same PDB:

e2dsjA2	A:1-70	Nucleoside phosphorylase/phosphoribosyltransferase-N	Nucleoside phosphorylase/phosphoribosyltransferase-N	Nucleoside phosphorylase/phosphoribosyltransferase-N
e2dsjA1	A:71-323	Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain	Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain	Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
e2dsjA3	A:324-423	alpha/beta-Hammerhead/Barrel-sandwich hybrid	alpha/beta-Hammerhead/Barrel-sandwich hybrid	Pyrimidine nucleoside phosphorylase C-terminal domain
e2dsjB1	B:1-70	Nucleoside phosphorylase/phosphoribosyltransferase-N	Nucleoside phosphorylase/phosphoribosyltransferase-N	Nucleoside phosphorylase/phosphoribosyltransferase-N
e2dsjB3	B:71-323	Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain	Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain	Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
e2dsjB2	B:324-423	alpha/beta-Hammerhead/Barrel-sandwich hybrid	alpha/beta-Hammerhead/Barrel-sandwich hybrid	Pyrimidine nucleoside phosphorylase C-terminal domain

Structural contacts of domain e2dsjB1 of H-group "Nucleoside phosphorylase/phosphoribosyltransferase-N":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e2dsjA2	B:x,y,z->A:X,Y,Z	Nucleoside phosphorylase/phosphoribosyltransferase-N	Interaction Interface Pymol
e2dsjA1	B:x,y,z->A:X,Y,Z	Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain	Interaction Interface Pymol
e2dsjA1	B:x,y,z->A:-X+2,Y-1/2,-Z+1	Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain	Interaction Interface Pymol