Domain ID e2dsjB2

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  • A: a+b complex topology
  • X: alpha/beta-Hammerhead/Barrel-sandwich hybrid
  • H: alpha/beta-Hammerhead/Barrel-sandwich hybrid
  • T: Pyrimidine nucleoside phosphorylase C-terminal domain
  • F: PYNP_C
UID: 000312458
Type: Automatic domain
Parent: e2tptA2
Range: B:324-423
PDB: 2dsj
PDB Description: PYRIMIDINE-NUCLEOSIDE (THYMIDINE) PHOSPHORYLASE
UniProt: Q5SHF9
Species:

Structure of domain e2dsjB2

Domains in the same chain:

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e2dsjB1 B:1-70 Nucleoside phosphorylase/phosphoribosyltransferase-N Nucleoside phosphorylase/phosphoribosyltransferase-N Nucleoside phosphorylase/phosphoribosyltransferase-N
e2dsjB3 B:71-323 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
e2dsjB2 B:324-423 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Pyrimidine nucleoside phosphorylase C-terminal domain

Domains in the same PDB:

e2dsjA2 A:1-70 Nucleoside phosphorylase/phosphoribosyltransferase-N Nucleoside phosphorylase/phosphoribosyltransferase-N Nucleoside phosphorylase/phosphoribosyltransferase-N
e2dsjA1 A:71-323 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
e2dsjA3 A:324-423 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Pyrimidine nucleoside phosphorylase C-terminal domain
e2dsjB1 B:1-70 Nucleoside phosphorylase/phosphoribosyltransferase-N Nucleoside phosphorylase/phosphoribosyltransferase-N Nucleoside phosphorylase/phosphoribosyltransferase-N
e2dsjB3 B:71-323 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
e2dsjB2 B:324-423 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Pyrimidine nucleoside phosphorylase C-terminal domain

Structural contacts of domain e2dsjB2 of H-group "alpha/beta-Hammerhead/Barrel-sandwich hybrid":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2dsjB2 B:x,y,z->B:-X+1,Y-1/2,-Z+2 alpha/beta-Hammerhead/Barrel-sandwich hybrid Interaction Interface Pymol
e2dsjB3 B:x,y,z->B:-X+1,Y-1/2,-Z+2 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain Interaction Interface Pymol
e2dsjB3 B:-X+1,Y-1/2,-Z+2->B:x,y,z Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain Interaction Interface Pymol
e2dsjB2 B:-X+1,Y-1/2,-Z+2->B:x,y,z alpha/beta-Hammerhead/Barrel-sandwich hybrid Interaction Interface Pymol