Domain ID e2waqP1

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  • A: few secondary structure elements
  • X: Rubredoxin-like
  • H: Rubredoxin-related
  • T: Rubredoxin-related
  • F: Unmapped domains
UID: 000134862
Type: Automatic domain
Parent: e1twfL1
Range: P:3-48
Ligands: ZN
PDB: 2waq
PDB Description: DNA-DIRECTED RNA POLYMERASE RPO12 SUBUNIT
Species: Sulfolobus shibatae

Structure of domain e2waqP1

Domains in the same chain:

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e2waqP1 P:3-48 Rubredoxin-like Rubredoxin-related Rubredoxin-related

Domains in the same PDB:

e2waqA4 A:4-306 N-terminal domain in RNA-polymerase beta-prime subunit N-terminal domain in RNA-polymerase beta-prime subunit N-terminal domain in RNA-polymerase beta-prime subunit
e2waqA1 A:307-494 cradle loop barrel RIFT-related double psi
e2waqA2 A:495-644 first helical domain in RNA-polymerase beta-prime subunit first helical domain in RNA-polymerase beta-prime subunit first helical domain in RNA-polymerase beta-prime subunit
e2waqA3 A:645-879 second helical domain in RNA-polymerase beta-prime subunit second helical domain in RNA-polymerase beta-prime subunit second helical domain in RNA-polymerase beta-prime subunit
e2waqB3 B:8-170,B:345-475 N-terminal domain in beta subunit of DNA dependent RNA-polymerase N-terminal domain in beta subunit of DNA dependent RNA-polymerase N-terminal domain in beta subunit of DNA dependent RNA-polymerase
e2waqB7 B:171-344 insertion domain in beta subunit of DNA dependent RNA-polymerase insertion domain in beta subunit of DNA dependent RNA-polymerase insertion domain in beta subunit of DNA dependent RNA-polymerase
e2waqB6 B:476-575 inserted a+b domain in yeast RNA polymerase beta subunit inserted a+b domain in yeast RNA polymerase beta subunit inserted a+b domain in yeast RNA polymerase beta subunit
e2waqB1 B:576-715 barrel domain in beta subunit of DNA dependent RNA-polymerase barrel domain in beta subunit of DNA dependent RNA-polymerase barrel domain in beta subunit of DNA dependent RNA-polymerase
e2waqB2 B:716-752,B:876-998 cradle loop barrel RIFT-related double psi
e2waqB5 B:753-875 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Single hybrid motif
e2waqB4 B:999-1122 C-terminal domain in beta subunit of DNA dependent RNA-polymerase C-terminal domain in beta subunit of DNA dependent RNA-polymerase C-terminal domain in beta subunit of DNA dependent RNA-polymerase
e2waqC1 C:11-65 helical domain in yeast RNA-polymerases third helical domain in yeast RNA-polymerase II beta-prime subunit third helical domain in yeast RNA-polymerase II beta-prime subunit
e2waqC2 C:66-115,C:276-394 central helical domain in RNA-polymerase beta-prime subunit central helical domain in RNA-polymerase beta-prime subunit central helical domain in RNA-polymerase beta-prime subunit
e2waqC3 C:116-147,C:233-275 ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit
e2waqC4 C:148-232 permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit
e2waqD1 D:2-36,D:159-264 DCoH-like RBP11-like subunits of RNA polymerase RBP11-like subunits of RNA polymerase
e2waqD2 D:37-158 Ribosomal protein TL5/L25 C-terminal domain-like Insert subdomain of RNA polymerase alpha subunit Insert subdomain of RNA polymerase alpha subunit
e2waqE2 E:1-78 Dodecin subunit-like Flavin-binding protein dodecin-like Flavin-binding protein dodecin-like
e2waqE1 E:79-177 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e2waqF1 F:3-92 HhH/H2TH SAM/DNA-glycosylase SAM domain-like
e2waqG1 G:5-117 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e2waqH1 H:9-82 RPB5-like RNA polymerase subunit RPB5-like RNA polymerase subunit RPB5-like RNA polymerase subunit
e2waqK1 K:9-94 RPB6/omega subunit-like RPB6/omega subunit-like RPB6
e2waqL1 L:1-91 DCoH-like RBP11-like subunits of RNA polymerase RBP11-like subunits of RNA polymerase
e2waqN1 N:1-64 HTH RPB10 RPB10
e2waqP1 P:3-48 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e2waqQ1 Q:38-82 YqgQ-like YqgQ-like YqgQ-like