ECOD: domain e2waqQ1

Domain ID e2waqQ1

A: alpha bundles
X: YqgQ-like
H: YqgQ-like
T: YqgQ-like
F: RNA_pol_Rpo13

UID:	000363783
Type:	Automatic domain
Parent:	e4aybQ1
Range:	Q:38-82
PDB:	2waq
PDB Description:	DNA-DIRECTED RNA POLYMERASE RPO13 SUBUNIT
Species:	Sulfolobus shibatae

Domains in the same chain:

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e2waqQ1	Q:38-82	YqgQ-like	YqgQ-like	YqgQ-like

Domains in the same PDB:

e2waqA4	A:4-306	N-terminal domain in RNA-polymerase beta-prime subunit	N-terminal domain in RNA-polymerase beta-prime subunit	N-terminal domain in RNA-polymerase beta-prime subunit
e2waqA1	A:307-494	cradle loop barrel	RIFT-related	double psi
e2waqA2	A:495-644	first helical domain in RNA-polymerase beta-prime subunit	first helical domain in RNA-polymerase beta-prime subunit	first helical domain in RNA-polymerase beta-prime subunit
e2waqA3	A:645-879	second helical domain in RNA-polymerase beta-prime subunit	second helical domain in RNA-polymerase beta-prime subunit	second helical domain in RNA-polymerase beta-prime subunit
e2waqB3	B:8-170,B:345-475	N-terminal domain in beta subunit of DNA dependent RNA-polymerase	N-terminal domain in beta subunit of DNA dependent RNA-polymerase	N-terminal domain in beta subunit of DNA dependent RNA-polymerase
e2waqB7	B:171-344	insertion domain in beta subunit of DNA dependent RNA-polymerase	insertion domain in beta subunit of DNA dependent RNA-polymerase	insertion domain in beta subunit of DNA dependent RNA-polymerase
e2waqB6	B:476-575	inserted a+b domain in yeast RNA polymerase beta subunit	inserted a+b domain in yeast RNA polymerase beta subunit	inserted a+b domain in yeast RNA polymerase beta subunit
e2waqB1	B:576-715	barrel domain in beta subunit of DNA dependent RNA-polymerase	barrel domain in beta subunit of DNA dependent RNA-polymerase	barrel domain in beta subunit of DNA dependent RNA-polymerase
e2waqB2	B:716-752,B:876-998	cradle loop barrel	RIFT-related	double psi
e2waqB5	B:753-875	alpha/beta-Hammerhead/Barrel-sandwich hybrid	alpha/beta-Hammerhead/Barrel-sandwich hybrid	Single hybrid motif
e2waqB4	B:999-1122	C-terminal domain in beta subunit of DNA dependent RNA-polymerase	C-terminal domain in beta subunit of DNA dependent RNA-polymerase	C-terminal domain in beta subunit of DNA dependent RNA-polymerase
e2waqC1	C:11-65	helical domain in yeast RNA-polymerases	third helical domain in yeast RNA-polymerase II beta-prime subunit	third helical domain in yeast RNA-polymerase II beta-prime subunit
e2waqC2	C:66-115,C:276-394	central helical domain in RNA-polymerase beta-prime subunit	central helical domain in RNA-polymerase beta-prime subunit	central helical domain in RNA-polymerase beta-prime subunit
e2waqC3	C:116-147,C:233-275	ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit	ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit	ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit
e2waqC4	C:148-232	permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit	permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit	permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit
e2waqD1	D:2-36,D:159-264	DCoH-like	RBP11-like subunits of RNA polymerase	RBP11-like subunits of RNA polymerase
e2waqD2	D:37-158	Ribosomal protein TL5/L25 C-terminal domain-like	Insert subdomain of RNA polymerase alpha subunit	Insert subdomain of RNA polymerase alpha subunit
e2waqE2	E:1-78	Dodecin subunit-like	Flavin-binding protein dodecin-like	Flavin-binding protein dodecin-like
e2waqE1	E:79-177	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e2waqF1	F:3-92	HhH/H2TH	SAM/DNA-glycosylase	SAM domain-like
e2waqG1	G:5-117	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e2waqH1	H:9-82	RPB5-like RNA polymerase subunit	RPB5-like RNA polymerase subunit	RPB5-like RNA polymerase subunit
e2waqK1	K:9-94	RPB6/omega subunit-like	RPB6/omega subunit-like	RPB6
e2waqL1	L:1-91	DCoH-like	RBP11-like subunits of RNA polymerase	RBP11-like subunits of RNA polymerase
e2waqN1	N:1-64	HTH	RPB10	RPB10
e2waqP1	P:3-48	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e2waqQ1	Q:38-82	YqgQ-like	YqgQ-like	YqgQ-like