ECOD: domain e4b8hJ1

Domain ID e4b8hJ1

A: a+b two layers
X: Alpha-beta plaits
H: Ribosomal protein S10
T: Ribosomal protein S10
F: Ribosomal_S10

UID:	000963443
Type:	Automatic domain
Parent:	e2uubJ1
Range:	J:1-96
PDB:	4b8h
PDB Description:
Hsap BLAST neighbor:	P60866
Species:

Domains in the same chain:

Download Pymol

e4b8hJ1	J:1-96	Alpha-beta plaits	Ribosomal protein S10	Ribosomal protein S10

Domains in the same PDB:

e4b8hC2	C:1-105	Alpha-lytic protease prodomain-like	KH-domains	Prokaryotic type KH domain (KH-domain type II)
e4b8hC1	C:106-207	T-fold	Ribosomal protein S3-C	Ribosomal protein S3-C
e4b8hE4	E:5-72	dsRBD-like	dsRNA-binding domain-like	dsRNA-binding domain-like
e4b8hE3	E:73-155	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like
e4b8hF1	F:1-101	Alpha-beta plaits	Ribosomal protein S6	Ribosomal protein S6
e4b8hG1	G:1-154	Ribosomal protein S7	Ribosomal protein S7	Ribosomal protein S7
e4b8hH1	H:1-66	R3H domain-like	Ribosomal protein S8, N-terminal domain	Ribosomal protein S8, N-terminal domain
e4b8hH2	H:67-138	Ribosomal protein S8, C-terminal domain	Ribosomal protein S8, C-terminal domain	Ribosomal protein S8, C-terminal domain
e4b8hJ1	J:1-96	Alpha-beta plaits	Ribosomal protein S10	Ribosomal protein S10
e4b8hK2	K:11-129	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like
e4b8hL1	L:4-124	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e4b8hN1	N:1-59	Glucocorticoid receptor-like	LIM domain-like	LIM domain-like
e4b8hO2	O:2-89	S15/NS1 RNA-binding domain	S15/NS1 RNA-binding domain	S15/NS1 RNA-binding domain
e4b8hP1	P:1-83	Ribosomal protein S16	Ribosomal protein S16	Ribosomal protein S16
e4b8hR2	R:19-88	HTH	HTH	tri-helical
e4b8hT1	T:1-92	Spectrin repeat-like	Ribosomal protein S20	Ribosomal protein S20
e4b8hY24	Y:4-38,Y:67-284	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e4b8hY22	Y:285-401	cradle loop barrel	RIFT-related	Alanine racemase-C
e4b8hY23	Y:402-475	Alpha-beta plaits	EF-G C-terminal domain-like	EF-G C-terminal domain-like
e4b8hY25	Y:476-585	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like
e4b8hY21	Y:586-690	Alpha-beta plaits	EF-G C-terminal domain-like	EF-G C-terminal domain-like

Structural contacts of domain e4b8hJ1 of H-group "Ribosomal protein S10":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e4b8hN1	J:X,Y,Z->N:x,y,z	LIM domain-like	Interaction Interface Pymol
e4b8hC2	J:x,y,z->C:X,Y,Z	KH-domains	Interaction Interface Pymol