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RIMD
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Summary
Structure view
Domain organization
Domain ID e4b8hY22
Download files:
FASTA
Coordinates
Conservation
Pymol
domain only
in chain
in PDB
SNVs
A: beta barrels
X: cradle loop barrel
H: RIFT-related
T: Alanine racemase-C
F: GTP_EFTU_D2
UID:
001157647
Type:
Automatic
domain
Parent:
e1n0uA1
Range:
Y:285-401
PDB:
4b8h
PDB Description:
Hsap BLAST neighbor:
Q96RP9
Species:
Domain
In chain context
In PDB context
Structure of domain e4b8hY22
Domains in the same chain:
Download Pymol
e4b8hY24
Y:4-38,Y:67-284
P-loop domains-like
P-loop domains-related
P-loop containing nucleoside triphosphate hydrolases
e4b8hY22
Y:285-401
cradle loop barrel
RIFT-related
Alanine racemase-C
e4b8hY23
Y:402-475
Alpha-beta plaits
EF-G C-terminal domain-like
EF-G C-terminal domain-like
e4b8hY25
Y:476-585
Ribosomal protein S5 domain 2-like
Ribosomal protein S5 domain 2-like
Ribosomal protein S5 domain 2-like
e4b8hY21
Y:586-690
Alpha-beta plaits
EF-G C-terminal domain-like
EF-G C-terminal domain-like
Domains in the same PDB:
e4b8hC2
C:1-105
Alpha-lytic protease prodomain-like
KH-domains
Prokaryotic type KH domain (KH-domain type II)
e4b8hC1
C:106-207
T-fold
Ribosomal protein S3-C
Ribosomal protein S3-C
e4b8hE4
E:5-72
dsRBD-like
dsRNA-binding domain-like
dsRNA-binding domain-like
e4b8hE3
E:73-155
Ribosomal protein S5 domain 2-like
Ribosomal protein S5 domain 2-like
Ribosomal protein S5 domain 2-like
e4b8hF1
F:1-101
Alpha-beta plaits
Ribosomal protein S6
Ribosomal protein S6
e4b8hG1
G:1-154
Ribosomal protein S7
Ribosomal protein S7
Ribosomal protein S7
e4b8hH1
H:1-66
R3H domain-like
Ribosomal protein S8, N-terminal domain
Ribosomal protein S8, N-terminal domain
e4b8hH2
H:67-138
Ribosomal protein S8, C-terminal domain
Ribosomal protein S8, C-terminal domain
Ribosomal protein S8, C-terminal domain
e4b8hJ1
J:1-96
Alpha-beta plaits
Ribosomal protein S10
Ribosomal protein S10
e4b8hK2
K:11-129
Ribonuclease H-like
Ribonuclease H-like
Ribonuclease H-like
e4b8hL1
L:4-124
OB-fold
Nucleic acid-binding proteins
Nucleic acid-binding proteins
e4b8hN1
N:1-59
Glucocorticoid receptor-like
LIM domain-like
LIM domain-like
e4b8hO2
O:2-89
S15/NS1 RNA-binding domain
S15/NS1 RNA-binding domain
S15/NS1 RNA-binding domain
e4b8hP1
P:1-83
Ribosomal protein S16
Ribosomal protein S16
Ribosomal protein S16
e4b8hR2
R:19-88
HTH
HTH
tri-helical
e4b8hT1
T:1-92
Spectrin repeat-like
Ribosomal protein S20
Ribosomal protein S20
e4b8hY24
Y:4-38,Y:67-284
P-loop domains-like
P-loop domains-related
P-loop containing nucleoside triphosphate hydrolases
e4b8hY22
Y:285-401
cradle loop barrel
RIFT-related
Alanine racemase-C
e4b8hY23
Y:402-475
Alpha-beta plaits
EF-G C-terminal domain-like
EF-G C-terminal domain-like
e4b8hY25
Y:476-585
Ribosomal protein S5 domain 2-like
Ribosomal protein S5 domain 2-like
Ribosomal protein S5 domain 2-like
e4b8hY21
Y:586-690
Alpha-beta plaits
EF-G C-terminal domain-like
EF-G C-terminal domain-like