Domain ID e4ddvB2

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  • A: a/b three-layered sandwiches
  • X: P-loop domains-like
  • H: P-loop domains-related
  • T: P-loop containing nucleoside triphosphate hydrolases
  • F: Unmapped domains
UID: 001648885
Type: Automatic domain
Parent: e2vl7A3
Range: B:284-536
PDB: 4ddv
PDB Description: Reverse gyrase
UniProt: O51934
Species: Thermotoga maritima

Structure of domain e4ddvB2

Domains in the same chain:

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e4ddvB8 B:2-54 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e4ddvB7 B:55-285 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e4ddvB2 B:284-536 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e4ddvB3 B:537-713 HAD domain-like HAD domain-related Toprim domain
e4ddvB5 B:714-773,B:1007-1103 HTH HTH winged
e4ddvB6 B:773-813,B:939-1006 LigT-like Prokaryotic type I DNA topoisomerase beta-barrel domain Prokaryotic type I DNA topoisomerase beta-barrel domain
e4ddvB4 B:813-938 HTH HTH winged

Domains in the same PDB:

e4ddvA7 A:2-54 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e4ddvA8 A:55-285 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e4ddvA2 A:282-536 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e4ddvA3 A:537-713 HAD domain-like HAD domain-related Toprim domain
e4ddvA5 A:714-773,A:1007-1103 HTH HTH winged
e4ddvA6 A:773-813,A:939-1006 LigT-like Prokaryotic type I DNA topoisomerase beta-barrel domain Prokaryotic type I DNA topoisomerase beta-barrel domain
e4ddvA4 A:813-938 HTH HTH winged
e4ddvB8 B:2-54 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e4ddvB7 B:55-285 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e4ddvB2 B:284-536 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e4ddvB3 B:537-713 HAD domain-like HAD domain-related Toprim domain
e4ddvB5 B:714-773,B:1007-1103 HTH HTH winged
e4ddvB6 B:773-813,B:939-1006 LigT-like Prokaryotic type I DNA topoisomerase beta-barrel domain Prokaryotic type I DNA topoisomerase beta-barrel domain
e4ddvB4 B:813-938 HTH HTH winged

Structural contacts of domain e4ddvB2 of H-group "P-loop domains-related":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2vl7A3 B:X-1,Y,Z->A:x,y,z P-loop domains-related Interaction Interface Pymol
e4ddvA2 B:X-1,Y,Z->A:x,y,z P-loop domains-related Interaction Interface Pymol
e4ddvA5 B:x,y,z->A:X,Y,Z HTH Interaction Interface Pymol