ECOD: domain e4dv0O2

Domain ID e4dv0O2

A: alpha arrays
X: S15/NS1 RNA-binding domain
H: S15/NS1 RNA-binding domain
T: S15/NS1 RNA-binding domain
F: Ribosomal_S15

UID:	001211552
Type:	Automatic domain
Parent:	e3j6vO1
Range:	O:2-88
PDB:	4dv0
PDB Description:	RIBOSOMAL PROTEIN S15
UniProt:	Q5SJ76
Species:

Domains in the same chain:

Download Pymol

e4dv0O2	O:2-88	S15/NS1 RNA-binding domain	S15/NS1 RNA-binding domain	S15/NS1 RNA-binding domain

Domains in the same PDB:

e4dv0B1	B:7-127,B:157-240	Flavodoxin-like	Ribosomal protein S2/SIS domain	Ribosomal protein S2/SIS domain
e4dv0C2	C:1-105	Alpha-lytic protease prodomain-like	KH-domains	Prokaryotic type KH domain (KH-domain type II)
e4dv0C1	C:106-206	T-fold	Ribosomal protein S3-C	Ribosomal protein S3-C
e4dv0D1	D:2-209	beta-Grasp	Ubiquitin-related	Alpha-L RNA-binding motif
e4dv0E4	E:5-72	dsRBD-like	dsRNA-binding domain-like	dsRNA-binding domain-like
e4dv0E3	E:73-154	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like
e4dv0F1	F:1-101	Alpha-beta plaits	Ribosomal protein S6	Ribosomal protein S6
e4dv0G1	G:1-154	Ribosomal protein S7	Ribosomal protein S7	Ribosomal protein S7
e4dv0H1	H:1-66	R3H domain-like	Ribosomal protein S8, N-terminal domain	Ribosomal protein S8, N-terminal domain
e4dv0H2	H:67-138	Ribosomal protein S8, C-terminal domain	Ribosomal protein S8, C-terminal domain	Ribosomal protein S8, C-terminal domain
e4dv0I1	I:2-128	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like
e4dv0J1	J:1-96	Alpha-beta plaits	Ribosomal protein S10	Ribosomal protein S10
e4dv0K2	K:11-126	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like
e4dv0L1	L:1-121	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e4dv0M1	M:2-119	HhH/H2TH	H2TH	H2TH
e4dv0N1	N:1-59	Glucocorticoid receptor-like	LIM domain-like	LIM domain-like
e4dv0O2	O:2-88	S15/NS1 RNA-binding domain	S15/NS1 RNA-binding domain	S15/NS1 RNA-binding domain
e4dv0P1	P:1-83	Ribosomal protein S16	Ribosomal protein S16	Ribosomal protein S16
e4dv0Q1	Q:2-78	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e4dv0R2	R:19-88	HTH	HTH	tri-helical
e4dv0S1	S:2-81	Ribosomal protein S19	Ribosomal protein S19	Ribosomal protein S19
e4dv0T1	T:1-92	Spectrin repeat-like	Ribosomal protein S20	Ribosomal protein S20

Structural contacts of domain e4dv0O2 of H-group "S15/NS1 RNA-binding domain":

Sorry, the images are being generated.

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e4dv0F1	O:x,y,z->F:X,Y,Z	Ribosomal protein S6	Interaction Interface Pymol