Domain ID e4k95G5

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  • A: few secondary structure elements
  • X: RING/U-box-like
  • H: RING/U-box-like
  • T: Ariadne-1 protein homolog
  • F: IBR
UID: 001686076
Type: Automatic domain
Parent: e5c1zB2
Range: G:320-408
Ligands: ZN
PDB: 4k95
PDB Description: E3 UBIQUITIN-PROTEIN LIGASE PARKIN
UniProt: Q9JK66
Hsap BLAST neighbor: O60260
Species: Rattus norvegicus

Structure of domain e4k95G5

Domains in the same chain:

Download Pymol

e4k95G3 G:1-72 beta-Grasp Ubiquitin-related Ubiquitin-like
e4k95G1 G:141-227 RING/U-box-like RING/U-box-like RING/U-box
e4k95G6 G:228-327 RING/U-box-like RING/U-box-like RING/U-box
e4k95G5 G:320-408 RING/U-box-like RING/U-box-like Ariadne-1 protein homolog
e4k95G4 G:411-465 RING/U-box-like RING/U-box-like Ariadne-1 protein homolog

Domains in the same PDB:

e4k95A2 A:1-72 beta-Grasp Ubiquitin-related Ubiquitin-like
e4k95A1 A:141-225 RING/U-box-like RING/U-box-like RING/U-box
e4k95A4 A:228-327 RING/U-box-like RING/U-box-like RING/U-box
e4k95A6 A:329-385 RING/U-box-like RING/U-box-like IBR domain
e4k95A3 A:379-404,A:411-465 RING/U-box-like RING/U-box-like Ariadne-1 protein homolog
e4k95B2 B:1-72 beta-Grasp Ubiquitin-related Ubiquitin-like
e4k95B1 B:141-227 RING/U-box-like RING/U-box-like RING/U-box
e4k95B4 B:228-327 RING/U-box-like RING/U-box-like RING/U-box
e4k95B5 B:328-385 RING/U-box-like RING/U-box-like IBR domain
e4k95B3 B:411-465 RING/U-box-like RING/U-box-like Ariadne-1 protein homolog
e4k95C2 C:1-72 beta-Grasp Ubiquitin-related Ubiquitin-like
e4k95C1 C:141-227 RING/U-box-like RING/U-box-like RING/U-box
e4k95C4 C:228-327 RING/U-box-like RING/U-box-like RING/U-box
e4k95C5 C:328-385 RING/U-box-like RING/U-box-like IBR domain
e4k95C3 C:411-465 RING/U-box-like RING/U-box-like Ariadne-1 protein homolog
e4k95D2 D:1-72 beta-Grasp Ubiquitin-related Ubiquitin-like
e4k95D1 D:141-227 RING/U-box-like RING/U-box-like RING/U-box
e4k95D4 D:228-327 RING/U-box-like RING/U-box-like RING/U-box
e4k95D5 D:328-385 RING/U-box-like RING/U-box-like IBR domain
e4k95D3 D:411-465 RING/U-box-like RING/U-box-like Ariadne-1 protein homolog
e4k95E2 E:1-72 beta-Grasp Ubiquitin-related Ubiquitin-like
e4k95E1 E:141-227 RING/U-box-like RING/U-box-like RING/U-box
e4k95E4 E:228-327 RING/U-box-like RING/U-box-like RING/U-box
e4k95E5 E:328-385 RING/U-box-like RING/U-box-like IBR domain
e4k95E3 E:411-465 RING/U-box-like RING/U-box-like Ariadne-1 protein homolog
e4k95F2 F:1-72 beta-Grasp Ubiquitin-related Ubiquitin-like
e4k95F1 F:141-227 RING/U-box-like RING/U-box-like RING/U-box
e4k95F4 F:228-327 RING/U-box-like RING/U-box-like RING/U-box
e4k95F5 F:328-385 RING/U-box-like RING/U-box-like IBR domain
e4k95F3 F:411-465 RING/U-box-like RING/U-box-like Ariadne-1 protein homolog
e4k95G3 G:1-72 beta-Grasp Ubiquitin-related Ubiquitin-like
e4k95G1 G:141-227 RING/U-box-like RING/U-box-like RING/U-box
e4k95G6 G:228-327 RING/U-box-like RING/U-box-like RING/U-box
e4k95G5 G:320-408 RING/U-box-like RING/U-box-like Ariadne-1 protein homolog
e4k95G4 G:411-465 RING/U-box-like RING/U-box-like Ariadne-1 protein homolog
e4k95H2 H:1-72 beta-Grasp Ubiquitin-related Ubiquitin-like
e4k95H1 H:141-227 RING/U-box-like RING/U-box-like RING/U-box
e4k95H4 H:228-327 RING/U-box-like RING/U-box-like RING/U-box
e4k95H5 H:328-385 RING/U-box-like RING/U-box-like IBR domain
e4k95H3 H:411-465 RING/U-box-like RING/U-box-like Ariadne-1 protein homolog
e4k95I2 I:1-72 beta-Grasp Ubiquitin-related Ubiquitin-like
e4k95I1 I:141-227 RING/U-box-like RING/U-box-like RING/U-box
e4k95I4 I:228-327 RING/U-box-like RING/U-box-like RING/U-box
e4k95I5 I:328-385 RING/U-box-like RING/U-box-like IBR domain
e4k95I3 I:411-465 RING/U-box-like RING/U-box-like Ariadne-1 protein homolog
e4k95J2 J:1-72 beta-Grasp Ubiquitin-related Ubiquitin-like
e4k95J1 J:141-227 RING/U-box-like RING/U-box-like RING/U-box
e4k95J4 J:228-327 RING/U-box-like RING/U-box-like RING/U-box
e4k95J5 J:328-385 RING/U-box-like RING/U-box-like IBR domain
e4k95J3 J:411-465 RING/U-box-like RING/U-box-like Ariadne-1 protein homolog
e4k95K2 K:1-72 beta-Grasp Ubiquitin-related Ubiquitin-like
e4k95K1 K:141-227 RING/U-box-like RING/U-box-like RING/U-box
e4k95K4 K:228-327 RING/U-box-like RING/U-box-like RING/U-box
e4k95K5 K:328-385 RING/U-box-like RING/U-box-like IBR domain
e4k95K3 K:411-465 RING/U-box-like RING/U-box-like Ariadne-1 protein homolog
e4k95L2 L:1-72 beta-Grasp Ubiquitin-related Ubiquitin-like
e4k95L1 L:141-227 RING/U-box-like RING/U-box-like RING/U-box
e4k95L4 L:228-327 RING/U-box-like RING/U-box-like RING/U-box
e4k95L5 L:328-385 RING/U-box-like RING/U-box-like IBR domain
e4k95L3 L:411-465 RING/U-box-like RING/U-box-like Ariadne-1 protein homolog

Structural contacts of domain e4k95G5 of H-group "RING/U-box-like":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e5c1zB2 G:X,Y,Z-1->F:x,y,z RING/U-box-like Interaction Interface Pymol
e5c1zB2 G:X,Y,Z->K:x,y,z RING/U-box-like Interaction Interface Pymol