| Protein ID Link to complete analysis report |
Lenth Link to complete analysis report |
Similarity with COG COG1555 |
All predicted COG clusters |
|---|---|---|---|
| 1g035374m | 66 | hhsearch probability: 94.14 Identity: 24% subject length: 149 Length of aligned reigon: 25 Coverage over query: 36-60 Coverage over subject: 100-130 |
COG0258, Exo 5'-3' exonuclease (including N-terminal domain of PolI) [DNA replication, recombination, and repair] COG0322, UvrC Nuclease subunit of the excinuclease complex [DNA replication, recombination, and repair] COG1948, MUS81 ERCC4-type nuclease [DNA replication, recombination, and repair] COG0632, RuvA Holliday junction resolvasome, DNA-binding subunit [DNA replication, recombination, and repair] COG0272, Lig NAD-dependent DNA ligase (contains BRCT domain type II) [DNA replication, recombination, and repair] COG1555, ComEA DNA uptake protein and related DNA-binding proteins [DNA replication, recombination, and repair] COG0177, Nth Predicted EndoIII-related endonuclease [DNA replication, recombination, and repair] COG0353, RecR Recombinational DNA repair protein (RecF pathway) [DNA replication, recombination, and repair] |
| 1g017612m | 368 | hhsearch probability: 93.23 Identity: 41% subject length: 149 Length of aligned reigon: 37 Coverage over query: 239-275 Coverage over subject: 86-124 |
COG5241, RAD10 Nucleotide excision repair endonuclease NEF1, RAD10 subunit [DNA replication, recombination, and repair] COG1948, MUS81 ERCC4-type nuclease [DNA replication, recombination, and repair] COG0322, UvrC Nuclease subunit of the excinuclease complex [DNA replication, recombination, and repair] COG0272, Lig NAD-dependent DNA ligase (contains BRCT domain type II) [DNA replication, recombination, and repair] COG1623, Predicted nucleic-acid-binding protein (contains the HHH domain) [General function prediction only] COG2003, RadC DNA repair proteins [DNA replication, recombination, and repair] COG0632, RuvA Holliday junction resolvasome, DNA-binding subunit [DNA replication, recombination, and repair] COG1796, POL4 DNA polymerase IV (family X) [DNA replication, recombination, and repair] COG1555, ComEA DNA uptake protein and related DNA-binding proteins [DNA replication, recombination, and repair] |
| 1g035092m | 73 | hhsearch probability: 95.39 Identity: 28% subject length: 149 Length of aligned reigon: 25 Coverage over query: 8-32 Coverage over subject: 100-130 |
COG0258, Exo 5'-3' exonuclease (including N-terminal domain of PolI) [DNA replication, recombination, and repair] COG0322, UvrC Nuclease subunit of the excinuclease complex [DNA replication, recombination, and repair] COG0272, Lig NAD-dependent DNA ligase (contains BRCT domain type II) [DNA replication, recombination, and repair] COG1948, MUS81 ERCC4-type nuclease [DNA replication, recombination, and repair] COG1555, ComEA DNA uptake protein and related DNA-binding proteins [DNA replication, recombination, and repair] COG1491, Predicted RNA-binding protein [Translation, ribosomal structure and biogenesis] COG0632, RuvA Holliday junction resolvasome, DNA-binding subunit [DNA replication, recombination, and repair] COG0353, RecR Recombinational DNA repair protein (RecF pathway) [DNA replication, recombination, and repair] |
| 1g033363m | 121 | hhsearch probability: 92.55 Identity: 25% subject length: 149 Length of aligned reigon: 24 Coverage over query: 71-94 Coverage over subject: 95-118 |
COG0177, Nth Predicted EndoIII-related endonuclease [DNA replication, recombination, and repair] COG0122, AlkA 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase [DNA replication, recombination, and repair] COG1194, MutY A/G-specific DNA glycosylase [DNA replication, recombination, and repair] COG2231, Uncharacterized protein related to Endonuclease III [DNA replication, recombination, and repair] COG1059, Thermostable 8-oxoguanine DNA glycosylase [DNA replication, recombination, and repair] COG0632, RuvA Holliday junction resolvasome, DNA-binding subunit [DNA replication, recombination, and repair] COG0353, RecR Recombinational DNA repair protein (RecF pathway) [DNA replication, recombination, and repair] COG1555, ComEA DNA uptake protein and related DNA-binding proteins [DNA replication, recombination, and repair] COG0272, Lig NAD-dependent DNA ligase (contains BRCT domain type II) [DNA replication, recombination, and repair] |
| 1g009281m | 538 | hhsearch probability: 94.70 Identity: 27% subject length: 149 Length of aligned reigon: 51 Coverage over query: 291-347 Coverage over subject: 93-148 |
COG1796, POL4 DNA polymerase IV (family X) [DNA replication, recombination, and repair] COG5163, NOP7 Protein required for biogenesis of the 60S ribosomal subunit [Translation, ribosomal structure and biogenesis] COG0632, RuvA Holliday junction resolvasome, DNA-binding subunit [DNA replication, recombination, and repair] COG1555, ComEA DNA uptake protein and related DNA-binding proteins [DNA replication, recombination, and repair] COG0272, Lig NAD-dependent DNA ligase (contains BRCT domain type II) [DNA replication, recombination, and repair] |
| 1g012862m | 455 | hhsearch probability: 95.25 Identity: 27% subject length: 149 Length of aligned reigon: 51 Coverage over query: 291-347 Coverage over subject: 93-148 |
COG1555, ComEA DNA uptake protein and related DNA-binding proteins [DNA replication, recombination, and repair] COG0632, RuvA Holliday junction resolvasome, DNA-binding subunit [DNA replication, recombination, and repair] COG0272, Lig NAD-dependent DNA ligase (contains BRCT domain type II) [DNA replication, recombination, and repair] COG5163, NOP7 Protein required for biogenesis of the 60S ribosomal subunit [Translation, ribosomal structure and biogenesis] COG1796, POL4 DNA polymerase IV (family X) [DNA replication, recombination, and repair] COG1948, MUS81 ERCC4-type nuclease [DNA replication, recombination, and repair] COG3743, Uncharacterized conserved protein [Function unknown] |
| 1g012847m | 455 | hhsearch probability: 95.25 Identity: 27% subject length: 149 Length of aligned reigon: 51 Coverage over query: 291-347 Coverage over subject: 93-148 |
COG1555, ComEA DNA uptake protein and related DNA-binding proteins [DNA replication, recombination, and repair] COG0632, RuvA Holliday junction resolvasome, DNA-binding subunit [DNA replication, recombination, and repair] COG0272, Lig NAD-dependent DNA ligase (contains BRCT domain type II) [DNA replication, recombination, and repair] COG5163, NOP7 Protein required for biogenesis of the 60S ribosomal subunit [Translation, ribosomal structure and biogenesis] COG1796, POL4 DNA polymerase IV (family X) [DNA replication, recombination, and repair] COG1948, MUS81 ERCC4-type nuclease [DNA replication, recombination, and repair] COG3743, Uncharacterized conserved protein [Function unknown] |
| 1g012388m | 464 | hhsearch probability: 95.30 Identity: 27% subject length: 149 Length of aligned reigon: 52 Coverage over query: 290-347 Coverage over subject: 92-148 |
COG0272, Lig NAD-dependent DNA ligase (contains BRCT domain type II) [DNA replication, recombination, and repair] COG1555, ComEA DNA uptake protein and related DNA-binding proteins [DNA replication, recombination, and repair] COG0632, RuvA Holliday junction resolvasome, DNA-binding subunit [DNA replication, recombination, and repair] COG5163, NOP7 Protein required for biogenesis of the 60S ribosomal subunit [Translation, ribosomal structure and biogenesis] COG1796, POL4 DNA polymerase IV (family X) [DNA replication, recombination, and repair] COG1948, MUS81 ERCC4-type nuclease [DNA replication, recombination, and repair] |
| 1g010406m | 511 | hhsearch probability: 95.25 Identity: 27% subject length: 149 Length of aligned reigon: 52 Coverage over query: 290-347 Coverage over subject: 92-148 |
COG5163, NOP7 Protein required for biogenesis of the 60S ribosomal subunit [Translation, ribosomal structure and biogenesis] COG1555, ComEA DNA uptake protein and related DNA-binding proteins [DNA replication, recombination, and repair] COG0272, Lig NAD-dependent DNA ligase (contains BRCT domain type II) [DNA replication, recombination, and repair] COG0632, RuvA Holliday junction resolvasome, DNA-binding subunit [DNA replication, recombination, and repair] COG1796, POL4 DNA polymerase IV (family X) [DNA replication, recombination, and repair] COG1948, MUS81 ERCC4-type nuclease [DNA replication, recombination, and repair] |
| 1g009303m | 538 | hhsearch probability: 95.00 Identity: 27% subject length: 149 Length of aligned reigon: 52 Coverage over query: 290-347 Coverage over subject: 92-148 |
COG1796, POL4 DNA polymerase IV (family X) [DNA replication, recombination, and repair] COG5163, NOP7 Protein required for biogenesis of the 60S ribosomal subunit [Translation, ribosomal structure and biogenesis] COG1555, ComEA DNA uptake protein and related DNA-binding proteins [DNA replication, recombination, and repair] COG0632, RuvA Holliday junction resolvasome, DNA-binding subunit [DNA replication, recombination, and repair] COG0272, Lig NAD-dependent DNA ligase (contains BRCT domain type II) [DNA replication, recombination, and repair] |
| 1g041647m | 216 | hhsearch probability: 91.50 Identity: 39% subject length: 149 Length of aligned reigon: 36 Coverage over query: 73-108 Coverage over subject: 89-126 |
COG1948, MUS81 ERCC4-type nuclease [DNA replication, recombination, and repair] COG5241, RAD10 Nucleotide excision repair endonuclease NEF1, RAD10 subunit [DNA replication, recombination, and repair] COG0272, Lig NAD-dependent DNA ligase (contains BRCT domain type II) [DNA replication, recombination, and repair] COG1623, Predicted nucleic-acid-binding protein (contains the HHH domain) [General function prediction only] COG2003, RadC DNA repair proteins [DNA replication, recombination, and repair] COG0632, RuvA Holliday junction resolvasome, DNA-binding subunit [DNA replication, recombination, and repair] COG1555, ComEA DNA uptake protein and related DNA-binding proteins [DNA replication, recombination, and repair] |
| 1g009742m | 527 | hhsearch probability: 95.11 Identity: 27% subject length: 149 Length of aligned reigon: 51 Coverage over query: 279-335 Coverage over subject: 92-147 |
COG1796, POL4 DNA polymerase IV (family X) [DNA replication, recombination, and repair] COG1555, ComEA DNA uptake protein and related DNA-binding proteins [DNA replication, recombination, and repair] COG0632, RuvA Holliday junction resolvasome, DNA-binding subunit [DNA replication, recombination, and repair] COG0272, Lig NAD-dependent DNA ligase (contains BRCT domain type II) [DNA replication, recombination, and repair] COG5163, NOP7 Protein required for biogenesis of the 60S ribosomal subunit [Translation, ribosomal structure and biogenesis] |
| 1g015933m | 398 | hhsearch probability: 96.02 Identity: 25% subject length: 149 Length of aligned reigon: 53 Coverage over query: 289-347 Coverage over subject: 91-148 |
COG1555, ComEA DNA uptake protein and related DNA-binding proteins [DNA replication, recombination, and repair] COG0272, Lig NAD-dependent DNA ligase (contains BRCT domain type II) [DNA replication, recombination, and repair] COG0632, RuvA Holliday junction resolvasome, DNA-binding subunit [DNA replication, recombination, and repair] COG5163, NOP7 Protein required for biogenesis of the 60S ribosomal subunit [Translation, ribosomal structure and biogenesis] COG1796, POL4 DNA polymerase IV (family X) [DNA replication, recombination, and repair] COG3743, Uncharacterized conserved protein [Function unknown] COG1948, MUS81 ERCC4-type nuclease [DNA replication, recombination, and repair] |
| 1g032317m | 143 | hhsearch probability: 95.67 Identity: 46% subject length: 149 Length of aligned reigon: 24 Coverage over query: 18-41 Coverage over subject: 94-117 |
COG0177, Nth Predicted EndoIII-related endonuclease [DNA replication, recombination, and repair] COG1194, MutY A/G-specific DNA glycosylase [DNA replication, recombination, and repair] COG2231, Uncharacterized protein related to Endonuclease III [DNA replication, recombination, and repair] COG0122, AlkA 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase [DNA replication, recombination, and repair] COG1059, Thermostable 8-oxoguanine DNA glycosylase [DNA replication, recombination, and repair] COG1555, ComEA DNA uptake protein and related DNA-binding proteins [DNA replication, recombination, and repair] COG0353, RecR Recombinational DNA repair protein (RecF pathway) [DNA replication, recombination, and repair] COG1415, Uncharacterized conserved protein [Function unknown] COG0632, RuvA Holliday junction resolvasome, DNA-binding subunit [DNA replication, recombination, and repair] |
| 1g035971m | 614 | hhsearch probability: 99.36 Identity: 38% subject length: 149 Length of aligned reigon: 64 Coverage over query: 543-607 Coverage over subject: 82-146 |
COG1555, ComEA DNA uptake protein and related DNA-binding proteins [DNA replication, recombination, and repair] COG5059, KIP1 Kinesin-like protein [Cytoskeleton] COG1491, Predicted RNA-binding protein [Translation, ribosomal structure and biogenesis] COG4277, Predicted DNA-binding protein with the Helix-hairpin-helix motif [General function prediction only] COG2183, Tex Transcriptional accessory protein [Transcription] COG0556, UvrB Helicase subunit of the DNA excision repair complex [DNA replication, recombination, and repair] COG2176, PolC DNA polymerase III, alpha subunit (gram-positive type) [DNA replication, recombination, and repair] COG1031, Uncharacterized Fe-S oxidoreductase [Energy production and conversion] COG0632, RuvA Holliday junction resolvasome, DNA-binding subunit [DNA replication, recombination, and repair] |
| 1g005960m | 667 | hhsearch probability: 99.59 Identity: 38% subject length: 149 Length of aligned reigon: 63 Coverage over query: 584-646 Coverage over subject: 84-148 |
COG1555, ComEA DNA uptake protein and related DNA-binding proteins [DNA replication, recombination, and repair] COG1491, Predicted RNA-binding protein [Translation, ribosomal structure and biogenesis] COG5059, KIP1 Kinesin-like protein [Cytoskeleton] COG2183, Tex Transcriptional accessory protein [Transcription] COG4277, Predicted DNA-binding protein with the Helix-hairpin-helix motif [General function prediction only] COG1031, Uncharacterized Fe-S oxidoreductase [Energy production and conversion] COG2176, PolC DNA polymerase III, alpha subunit (gram-positive type) [DNA replication, recombination, and repair] COG0556, UvrB Helicase subunit of the DNA excision repair complex [DNA replication, recombination, and repair] |
| 1g005372m | 699 | hhsearch probability: 99.54 Identity: 39% subject length: 149 Length of aligned reigon: 62 Coverage over query: 582-643 Coverage over subject: 85-148 |
COG1555, ComEA DNA uptake protein and related DNA-binding proteins [DNA replication, recombination, and repair] COG1491, Predicted RNA-binding protein [Translation, ribosomal structure and biogenesis] COG4277, Predicted DNA-binding protein with the Helix-hairpin-helix motif [General function prediction only] COG2183, Tex Transcriptional accessory protein [Transcription] COG5059, KIP1 Kinesin-like protein [Cytoskeleton] COG1031, Uncharacterized Fe-S oxidoreductase [Energy production and conversion] COG2176, PolC DNA polymerase III, alpha subunit (gram-positive type) [DNA replication, recombination, and repair] COG0556, UvrB Helicase subunit of the DNA excision repair complex [DNA replication, recombination, and repair] |
| 1g039337m | 1344 | hhsearch probability: 99.17 Identity: 25% subject length: 149 Length of aligned reigon: 63 Coverage over query: 652-719 Coverage over subject: 87-149 |
COG2183, Tex Transcriptional accessory protein [Transcription] COG1098, VacB Predicted RNA binding protein (contains ribosomal protein S1 domain) [Translation, ribosomal structure and biogenesis] COG0539, RpsA Ribosomal protein S1 [Translation, ribosomal structure and biogenesis] COG1555, ComEA DNA uptake protein and related DNA-binding proteins [DNA replication, recombination, and repair] COG1093, SUI2 Translation initiation factor 2, alpha subunit (eIF-2alpha) [Translation, ribosomal structure and biogenesis] COG1185, Pnp Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) [Translation, ribosomal structure and biogenesis] COG1095, RPB7 DNA-directed RNA polymerase, subunit E' [Transcription] COG1096, Predicted RNA-binding protein (consists of S1 domain and a Zn-ribbon domain) [Translation, ribosomal structure and biogenesis] COG0557, VacB Exoribonuclease R [Transcription] COG2996, Predicted RNA-bindining protein (contains S1 and HTH domains) [General function prediction only] COG1097, RRP4 RNA-binding protein Rrp4 and related proteins (contain S1 domain and KH domain) [Translation, ribosomal structure and biogenesis] COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] COG5164, SPT5 Transcription elongation factor [Transcription] COG0816, Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) [DNA replication, recombination, and repair] |
| 1g034973m | 77 | hhsearch probability: 96.25 Identity: 39% subject length: 149 Length of aligned reigon: 31 Coverage over query: 2-32 Coverage over subject: 93-125 |
COG1555, ComEA DNA uptake protein and related DNA-binding proteins [DNA replication, recombination, and repair] COG1948, MUS81 ERCC4-type nuclease [DNA replication, recombination, and repair] COG5241, RAD10 Nucleotide excision repair endonuclease NEF1, RAD10 subunit [DNA replication, recombination, and repair] |