Psyllid ID: psy1282

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------
Protein Sequence
MKYIILCSQENFGGTTYFYQAPSSGTEVPGAAGPAPGDDLSAPGVLSSPPGYTMHPGTPPHVRHKPPNAATVDHSSFYMSENIRAEIQHKNALTLVSANPELFPELPLEVDNYHDLQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVVSYAELKQCLDQSFHELSSSASLTPKSTLPLYLLSVHQKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVVSYAELKQCLDQSFHELSSSASLTPKSTLPL
Secondary Structure (PSIPRED)
ccEEEEEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEcccccEEEcccccEEEccccccccccccccccccccHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHccHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHcccccccccccccccccccccHHHHHHHHHHHccccccccccccHHHHHHHHcccccccccEEEEEEccccEEEEEEHHHHHHHHHHHHHHHHHccccccccccHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHccccccccccccccccccHHHHHHHHHccccccccccccccHHHHHHHHcccccccccEEEEEEccccEEEEEEHHHHHHHHHHHHHHHHHcccccccccccc
Secondary Structure Prediction (SSPRO)
ccEEEEEEEccccccEEEEccccccccccccccccccccccccccEccccccEccccccccHccccccccccccccccccHHHHHHHHHcccEEEEcccHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHcccccHHccccHHHHHHHHHHHccHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHEEEcccccccEEEHHHHHHHHHHcccccccEEEEEccccccEEEEEHHHHHHHHHHHHHHHHHHcccccccEEEEEEccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHEEEEEccccccEEEHHHHHHHHHHcccccccEEEEEEcccccEEEEEHHHHHHHHHHHHHHHHHcccccccccccc
Coil and Loop (DISEMBL)
MKYIILCSqenfggttyfyqapssgtevpgaagpapgddlsapgvlssppgytmhpgtpphvrhkppnaatvdhssfymSENIRAEIQHKNALTlvsanpelfpelplevdnyhDLQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLgtinerpelnldptwsetgDRYMLKLFRDYLLHQVQedgrpwldmsHIVHCLNKLDAGTQEKICLMSRDEQSVLVVSYAELKQCLDQSFhelsssasltpkstlpLYLLSVHQKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLgtinerpelnldptwsetgDRYMLKLFRDYLLHQVQedgrpwldmsHIVHCLNKLDAGTQEKICLMSRDEQSVLVVSYAELKQCLDQSFhelsssasltpkstlpl
Flexible Loop (DISEMBL)
MKYIILCSQENFGGTTYFYQAPSSGTEVPGAAGPAPGDDLSAPGVLSSPPGYTMHPGTPPHVRHKPPNAATVDHSSFYMSENIRAEIQHKNALTLVSANPELFPELPLEVDNYHDLQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKlgtinerpelnldptwseTGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVVSYAELKQCLDQSFHElsssasltpkSTLPLYLLSVHQKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKlgtinerpelnldptwseTGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVVSYAELKQCLDQSFhelsssasltpkstlpl
Low Complexity Region (SEG)
MKYIILCSQENFGGTTYFYQAPSSGTEVPGAAGPAPGDDLSAPGVLSSPPGYTMHPGTPPHVRHKPPNAATVDHSSFYMSENIRAEIQHKNALTLVSANPELFPELPLEVDNYHDLQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVVSYAELKQCLDQSFHELSSSASLTPKSTLPLYLLSVHQKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVVSYAELKQCLDQSFHELSSSASLTPKSTLPL
Disordered region (IsUnstruct)
**YIILCSQENFGGTTYFYQ********************************************************FYMSENIRAEIQHKNALTLVSANPELFPELPLEVDNYHDLQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQKRTVVDLMPMIGARYYTQLDAVQLHGDSL********ENGRLFRLLVKLGTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVVSYAELKQCLDQSFHE*********KSTLPLYLLSVHQKRTVVDLMPMIGARYYTQLDAVQLHGDSL********ENGRLFRLLVKLGTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVVSYAELKQCLDQ*******************
Disordered Region (DISOPRED)
*KYIILCSQENFGGTTYFYQAP*********************GVLSSPPGYTMHPGTPPH**********VDHSSFYMSENIRAEIQHKNALTLVSANPELF********NYHDLQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPEL******SETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVVSYAELKQCLDQSFHELSSSASLTPKSTLPLYLLSVHQKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERP************DRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVVSYAELKQCLDQSFH****************
Disordered Region (DISEMBL)
MKYIILCSQENFGGTTYFYQAPSSGTEVPGAAGPAPGDDLSAPGVLSSPPGYTMHPGTPPHVRHKPPNAATVDHSSFYMSENIRAEIQHKNALTLVSANPELFPELPLEVDNYHDLQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVVSYAELKQCLDQSFHELSSSASLTPKSTLPLYLLSVHQKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVVSYAELKQCLDQSFHE***************
Disordered Region (DISPRO)
MKYIILCSQENFGGTTYFYQAPSSGTEVP*****APGDDLSAPGVLSSPPGYTMHPGTPPHVRHKPPNAATVDHSSFYMSENIRAEIQHKNALTLVSANPELFPELPLEVDNYHDLQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVVSYAELKQCLDQSFHELSSSASLTPKSTLPLYLLSVHQKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVVSYAELKQCLDQSFHELSSS***********
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MKYIILCSQENFGGTTYFYQAPSSGTEVPGAAGPAPGDDLSAPGVLSSPPGYTMHPGTPPHVRHKPPNAATVDHSSFYMSENIRAEIQHKNALTLVSANPELFPELPLEVDNYHDLQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVVSYAELKQCLDQSFHELSSSASLTPKSTLPLYLLSVHQKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVVSYAELKQCLDQSFHELSSSASLTPKSTLPL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	487	2.2.26 [Sep-21-2011]
Q640Q5	837	PAB-dependent poly(A)-spe	yes	N/A	0.410	0.238	0.631	1e-74
Q58A45	887	PAB-dependent poly(A)-spe	yes	N/A	0.410	0.225	0.631	1e-74
A1L1C7	787	PAB-dependent poly(A)-spe	yes	N/A	0.410	0.254	0.631	2e-74
P0CP50	684	PAB-dependent poly(A)-spe	yes	N/A	0.406	0.289	0.517	2e-55
P0CP51	684	PAB-dependent poly(A)-spe	N/A	N/A	0.406	0.289	0.517	2e-55
P0CD65	746	PAB-dependent poly(A)-spe	yes	N/A	0.408	0.266	0.532	8e-55
P34653	632	Uncharacterized protein Z	yes	N/A	0.398	0.306	0.489	3e-52
Q6MY57	662	PAB-dependent poly(A)-spe	yes	N/A	0.408	0.300	0.443	8e-43
Q2KFH6	680	PAB-dependent poly(A)-spe	N/A	N/A	0.396	0.283	0.454	1e-42
A1D1Y5	661	PAB-dependent poly(A)-spe	N/A	N/A	0.400	0.295	0.447	1e-42

>sp|Q640Q5|PAN3_MOUSE PAB-dependent poly(A)-specific ribonuclease subunit 3 OS=Mus musculus GN=Pan3 PE=2 SV=3

 Score =  281 bits (718), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 127/201 (63%), Positives = 166/201 (82%), Gaps = 1/201 (0%)

Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQK-RTVV 175
           Q DL +LGK++LA+ C SL  +QRENLQ +++L+  +YS+DL+NLILYLL+   + R+V 
Sbjct: 630 QADLISLGKVVLALACNSLAGIQRENLQKAMELVTINYSSDLKNLILYLLTDQNRMRSVN 689

Query: 176 DLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWS 235
           D+MPMIGAR+YTQLDA Q+  D +E +L+KE++NGRLFRLL KLGTINERPE   DPTWS
Sbjct: 690 DIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAKLGTINERPEFQKDPTWS 749

Query: 236 ETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVV 295
           ETGDRY+LKLFRD+L HQV E G PW+D+SHI+ CLNKLDAG  EKI L+SRDE+SVLVV
Sbjct: 750 ETGDRYLLKLFRDHLFHQVTEAGAPWIDLSHIISCLNKLDAGVPEKISLISRDEKSVLVV 809

Query: 296 SYAELKQCLDQSFHELSSSAS 316
           +Y++LK+C + +F EL ++A+
Sbjct: 810 TYSDLKRCFENTFQELIAAAN 830

Functions in cytoplasmic mRNA decay. As part of the Pan nuclease complex, recruits polyadenylate-binding protein which in turn stimulates PAN2 nuclease activity.
Mus musculus (taxid: 10090)

>sp|Q58A45|PAN3_HUMAN PAB-dependent poly(A)-specific ribonuclease subunit 3 OS=Homo sapiens GN=PAN3 PE=1 SV=3

 Score =  281 bits (718), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 127/201 (63%), Positives = 166/201 (82%), Gaps = 1/201 (0%)

Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQK-RTVV 175
           Q DL +LGK++LA+ C SL  +QRENLQ +++L+  +YS+DL+NLILYLL+   + R+V 
Sbjct: 684 QADLISLGKVVLALACNSLAGIQRENLQKAMELVTINYSSDLKNLILYLLTDQNRMRSVN 743

Query: 176 DLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWS 235
           D+MPMIGAR+YTQLDA Q+  D +E +L+KE++NGRLFRLL KLGTINERPE   DPTWS
Sbjct: 744 DIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAKLGTINERPEFQKDPTWS 803

Query: 236 ETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVV 295
           ETGDRY+LKLFRD+L HQV E G PW+D+SHI+ CLNKLDAG  EKI L+SRDE+SVLVV
Sbjct: 804 ETGDRYLLKLFRDHLFHQVTEAGAPWIDLSHIISCLNKLDAGVPEKISLISRDEKSVLVV 863

Query: 296 SYAELKQCLDQSFHELSSSAS 316
           +Y++LK+C + +F EL ++A+
Sbjct: 864 TYSDLKRCFENTFQELIAAAN 884

Functions in cytoplasmic mRNA decay. As part of the Pan nuclease complex, recruits polyadenylate-binding protein which in turn stimulates PAN2 nuclease activity.

Homo sapiens (taxid: 9606)

>sp|A1L1C7|PAN3_XENTR PAB-dependent poly(A)-specific ribonuclease subunit 3 OS=Xenopus tropicalis GN=pan3 PE=2 SV=1

 Score =  280 bits (715), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 127/201 (63%), Positives = 165/201 (82%), Gaps = 1/201 (0%)

Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQK-RTVV 175
           Q DL +LGK++LA+ C SL  +QRENLQ +++L+  +YS+DL+NLILYLL+   + R+V 
Sbjct: 584 QADLISLGKVVLALACNSLAGIQRENLQKAMELVTINYSSDLKNLILYLLTEQNRMRSVN 643

Query: 176 DLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWS 235
           D+MPMIGAR+YTQLDA Q+  D +E +L+KE++NGRLFRLL KLGTINERPE   DP WS
Sbjct: 644 DIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAKLGTINERPEFQKDPAWS 703

Query: 236 ETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVV 295
           ETGDRY+LKLFRD+L HQV E G PW+D+SHIV CLNKLDAG  EKI L+SRDE+SVLVV
Sbjct: 704 ETGDRYLLKLFRDHLFHQVTEAGTPWIDLSHIVSCLNKLDAGVPEKISLISRDEKSVLVV 763

Query: 296 SYAELKQCLDQSFHELSSSAS 316
           +Y++LK+C + +F EL ++A+
Sbjct: 764 TYSDLKRCFENTFQELVAAAN 784

Functions in cytoplasmic mRNA decay. Component of the Pan nuclease complex.

Xenopus tropicalis (taxid: 8364)

>sp|P0CP50|PAN3_CRYNJ PAB-dependent poly(A)-specific ribonuclease subunit PAN3 OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) GN=PAN3 PE=3 SV=1

 Score =  216 bits (551), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 105/203 (51%), Positives = 147/203 (72%), Gaps = 5/203 (2%)

Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSV---HQKRT 173
           Q+DL + GKLI+++TC         +L   ++ ++R YS+DL NLILYL+S     Q ++
Sbjct: 478 QEDLLSFGKLIISLTCDFFQPTLPFSL--PLEHISRHYSSDLSNLILYLISKPAQGQIKS 535

Query: 174 VVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPT 233
           + +++ M+G R   +LDAVQ + D LENEL  E+ENGR+ RLL KLG INER E  LDP 
Sbjct: 536 IDEVVKMMGPRILNELDAVQSYADVLENELGAEVENGRIVRLLTKLGFINERAEFELDPR 595

Query: 234 WSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVL 293
           WS+TGDRY+LKLFRDY+ H V  DG+P LD+SH++ CLNKLDAG  E++ L+SRD+QS L
Sbjct: 596 WSDTGDRYILKLFRDYVFHSVGVDGKPILDLSHVLVCLNKLDAGLDERVMLVSRDDQSCL 655

Query: 294 VVSYAELKQCLDQSFHELSSSAS 316
           VVSY E+K C++ +F+EL ++ +
Sbjct: 656 VVSYREIKHCIEAAFNELKNAGN 678

Regulatory subunit of the poly(A)-nuclease (PAN) deadenylation complex involved in cytoplasmic mRNA turnover. PAN specifically shortens poly(A) tails of RNA when the poly(A) stretch is bound by polyadenylate-binding protein PAB1. Deadenylation of the 3'-tail to a length that is too short to bind PAB1 induces mRNA decay. May also be involved in post-transcriptional maturation of mRNA poly(A) tails. PAN3 acts as a positive regulator for PAN activity, recruiting PAN2 to mRNA via its interaction with PAB1.

Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) (taxid: 214684)

>sp|P0CP51|PAN3_CRYNB PAB-dependent poly(A)-specific ribonuclease subunit PAN3 OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) GN=PAN3 PE=3 SV=1

 Score =  216 bits (551), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 105/203 (51%), Positives = 147/203 (72%), Gaps = 5/203 (2%)

Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSV---HQKRT 173
           Q+DL + GKLI+++TC         +L   ++ ++R YS+DL NLILYL+S     Q ++
Sbjct: 478 QEDLLSFGKLIISLTCDFFQPTLPFSL--PLEHISRHYSSDLSNLILYLISKPAQGQIKS 535

Query: 174 VVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPT 233
           + +++ M+G R   +LDAVQ + D LENEL  E+ENGR+ RLL KLG INER E  LDP 
Sbjct: 536 IDEVVKMMGPRILNELDAVQSYADVLENELGAEVENGRIVRLLTKLGFINERAEFELDPR 595

Query: 234 WSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVL 293
           WS+TGDRY+LKLFRDY+ H V  DG+P LD+SH++ CLNKLDAG  E++ L+SRD+QS L
Sbjct: 596 WSDTGDRYILKLFRDYVFHSVGVDGKPILDLSHVLVCLNKLDAGLDERVMLVSRDDQSCL 655

Query: 294 VVSYAELKQCLDQSFHELSSSAS 316
           VVSY E+K C++ +F+EL ++ +
Sbjct: 656 VVSYREIKHCIEAAFNELKNAGN 678

Regulatory subunit of the poly(A)-nuclease (PAN) deadenylation complex involved in cytoplasmic mRNA turnover. PAN specifically shortens poly(A) tails of RNA when the poly(A) stretch is bound by polyadenylate-binding protein PAB1. Deadenylation of the 3'-tail to a length that is too short to bind PAB1 induces mRNA decay. May also be involved in post-transcriptional maturation of mRNA poly(A) tails. PAN3 acts as a positive regulator for PAN activity, recruiting PAN2 to mRNA via its interaction with PAB1.

Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) (taxid: 283643)

>sp|P0CD65|PAN3_DICDI PAB-dependent poly(A)-specific ribonuclease subunit 3 OS=Dictyostelium discoideum GN=DDB_G0279129 PE=3 SV=1

 Score =  215 bits (547), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 107/201 (53%), Positives = 138/201 (68%), Gaps = 2/201 (0%)

Query: 118 DDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLS--VHQKRTVV 175
           +DL   G+LIL + CRS  +    NL  SI+ ++  YS +L NLI+YLL+  V     + 
Sbjct: 544 EDLLLFGRLILTLACRSAQSTTTTNLSKSIEYVSNQYSKELYNLIVYLLTKPVINLPNID 603

Query: 176 DLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWS 235
           +++ MI  R   + + +  + D LE ELSKE ENGRLFRL+ KLG INERP  ++DP WS
Sbjct: 604 EVVLMISGRLLQENNYLHTYTDDLETELSKEYENGRLFRLVTKLGFINERPLYDMDPRWS 663

Query: 236 ETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVV 295
           ETGDRY++KLFRDY+ HQV +DG P LD  H+V  LNKLD G  EKI LMSRDEQS+LVV
Sbjct: 664 ETGDRYLIKLFRDYIFHQVYDDGTPVLDFYHVVETLNKLDCGVDEKILLMSRDEQSLLVV 723

Query: 296 SYAELKQCLDQSFHELSSSAS 316
           SY +LK+C+D +F EL S  S
Sbjct: 724 SYKDLKKCIDSAFSELVSQKS 744

Functions in cytoplasmic mRNA decay. Component of the Pan nuclease complex.

Dictyostelium discoideum (taxid: 44689)

>sp|P34653|YOT7_CAEEL Uncharacterized protein ZK632.7 OS=Caenorhabditis elegans GN=ZK632.7 PE=4 SV=3

 Score =  206 bits (525), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 95/194 (48%), Positives = 135/194 (69%)

Query: 118 DDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQKRTVVDL 177
           +DL   G LI+A+        +++  Q     +  +YS DLRN+I +L +   ++T+ ++
Sbjct: 430 EDLNMFGNLIVALATGRANGWRKDLYQQLKKFIEDTYSMDLRNVIGFLHNNSTRKTINEI 489

Query: 178 MPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWSET 237
           MPMIG R++T ++ +Q   D LE ELS+EMENGRLFRL+ K+ T+ ER E   D  WSET
Sbjct: 490 MPMIGGRFFTVMENMQAKTDVLEAELSREMENGRLFRLVAKMNTVLERVEHGTDDAWSET 549

Query: 238 GDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVVSY 297
           GDR+MLKLFRDY+ HQV + G+ WLDM+HIV CLNKLD G+QEKI ++SR   + +++ Y
Sbjct: 550 GDRFMLKLFRDYVFHQVTDQGKAWLDMAHIVQCLNKLDCGSQEKIEMVSRSGDTQIIIDY 609

Query: 298 AELKQCLDQSFHEL 311
           A LK+CLD+SF +L
Sbjct: 610 ATLKRCLDKSFRDL 623

Caenorhabditis elegans (taxid: 6239)

>sp|Q6MY57|PAN3_ASPFU PAB-dependent poly(A)-specific ribonuclease subunit pan3 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=pan3 PE=3 SV=2

 Score =  175 bits (443), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 91/205 (44%), Positives = 127/205 (61%), Gaps = 6/205 (2%)

Query: 115 DLQ-DDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQK-- 171
           DLQ  DL   G+LI+ +   S   +   N   +++   R+YS  L+N + +LL+  QK  
Sbjct: 456 DLQRQDLVNFGQLIVTLGANSPTVMH--NPTKAMEHFTRAYSPQLKNSVFWLLNGMQKDQ 513

Query: 172 -RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNL 230
            R +   +  I ++  +  D+     D L ++LS+E+ENGRL RL+ KL  +NERPE   
Sbjct: 514 DRNIDVFITGISSQLMSTFDSALHLDDQLTSDLSRELENGRLVRLMAKLNFVNERPEYEH 573

Query: 231 DPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQ 290
           D  WSE G+RY LK+FRDY+ HQV   G P +D+ H++ CLNKLDAGT+EKI L+SRDEQ
Sbjct: 574 DRQWSENGERYFLKIFRDYVFHQVDAQGDPVVDLGHVITCLNKLDAGTEEKITLISRDEQ 633

Query: 291 SVLVVSYAELKQCLDQSFHELSSSA 315
           S  +VSY ELK+ L+ SF  L   A
Sbjct: 634 SCFIVSYKELKKALESSFQALMKPA 658

Regulatory subunit of the poly(A)-nuclease (PAN) deadenylation complex involved in cytoplasmic mRNA turnover. PAN specifically shortens poly(A) tails of RNA when the poly(A) stretch is bound by polyadenylate-binding protein pab1. Deadenylation of the 3'-tail to a length that is too short to bind pab1 induces mRNA decay. May also be involved in post-transcriptional maturation of mRNA poly(A) tails. pan3 acts as a positive regulator for PAN activity, recruiting pan2 to mRNA via its interaction with pab1.

Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) (taxid: 330879)

>sp|Q2KFH6|PAN3_MAGO7 PAB-dependent poly(A)-specific ribonuclease subunit PAN3 OS=Magnaporthe oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) GN=PAN3 PE=3 SV=1

 Score =  174 bits (442), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 90/198 (45%), Positives = 130/198 (65%), Gaps = 5/198 (2%)

Query: 117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQ---KRT 173
           ++D  A GKLI+++   +       NL  +I+ M R++S+ L++++L+LL+  Q   ++T
Sbjct: 456 EEDFVAFGKLIVSLATNT--PPTGLNLGKAIEQMGRNHSSTLKDMVLWLLNPPQASGQKT 513

Query: 174 VVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPT 233
           V +L+  I     T  DA Q   D L +EL +E+ENGR+ RLL+KL TINER E + D  
Sbjct: 514 VKNLVAGINEHVMTAFDAQQRQSDMLYSELYREVENGRVLRLLMKLATINERTEYDKDAG 573

Query: 234 WSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVL 293
           WSE GDRYMLKLFRDY+ HQV   GRP LD  H++ CL+KLD GT+E+I L SRD ++  
Sbjct: 574 WSENGDRYMLKLFRDYVFHQVDAQGRPVLDPGHMLRCLSKLDVGTEERIKLTSRDCETDF 633

Query: 294 VVSYAELKQCLDQSFHEL 311
           +V+Y +LK  +  +F EL
Sbjct: 634 LVTYKDLKGAVQSAFGEL 651

Regulatory subunit of the poly(A)-nuclease (PAN) deadenylation complex involved in cytoplasmic mRNA turnover. PAN specifically shortens poly(A) tails of RNA when the poly(A) stretch is bound by polyadenylate-binding protein PAB1. Deadenylation of the 3'-tail to a length that is too short to bind PAB1 induces mRNA decay. May also be involved in post-transcriptional maturation of mRNA poly(A) tails. PAN3 acts as a positive regulator for PAN activity, recruiting PAN2 to mRNA via its interaction with PAB1.

Magnaporthe oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) (taxid: 242507)

>sp|A1D1Y5|PAN3_NEOFI PAB-dependent poly(A)-specific ribonuclease subunit PAN3 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=pan3 PE=3 SV=2

 Score =  174 bits (442), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 90/201 (44%), Positives = 126/201 (62%), Gaps = 6/201 (2%)

Query: 115 DLQ-DDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQK-- 171
           DLQ  DL   G+LI+ +   S   +   N   +++   R+YS  L+N + +LL+  QK  
Sbjct: 455 DLQRQDLVNFGQLIVTLGANSPTVMH--NPTKAMEHFTRAYSPQLKNSVFWLLNGMQKDQ 512

Query: 172 -RTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNL 230
            R +   +  I ++  +  D+     D L ++LS+E+ENGRL RL+ KL  +NERPE   
Sbjct: 513 DRNIDIFITGISSQLMSTFDSALHLDDQLTSDLSRELENGRLVRLMTKLNFVNERPEYEH 572

Query: 231 DPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQ 290
           D  WSE G+RY LK+FRDY+ HQV   G P +D+ H++ CLNKLDAGT+EKI L+SRDEQ
Sbjct: 573 DRQWSENGERYFLKIFRDYVFHQVDVQGDPVVDLGHVISCLNKLDAGTEEKITLISRDEQ 632

Query: 291 SVLVVSYAELKQCLDQSFHEL 311
           S  +VSY ELK+ L+ SF  L
Sbjct: 633 SCFIVSYKELKKALESSFQAL 653

Regulatory subunit of the poly(A)-nuclease (PAN) deadenylation complex involved in cytoplasmic mRNA turnover. PAN specifically shortens poly(A) tails of RNA when the poly(A) stretch is bound by polyadenylate-binding protein pab1. Deadenylation of the 3'-tail to a length that is too short to bind pab1 induces mRNA decay. May also be involved in post-transcriptional maturation of mRNA poly(A) tails. pan3 acts as a positive regulator for PAN activity, recruiting pan2 to mRNA via its interaction with pab1.

Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) (taxid: 331117)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	487
340715808	607	PREDICTED: PAB-dependent poly(A)-specifi	0.375	0.301	0.747	9e-88
383864398	606	PREDICTED: PAB-dependent poly(A)-specifi	0.375	0.301	0.752	2e-87
380019400	606	PREDICTED: PAB-dependent poly(A)-specifi	0.351	0.282	0.741	3e-87
66500005	607	PREDICTED: PAB-dependent poly(A)-specifi	0.381	0.306	0.741	3e-87
242022354	612	conserved hypothetical protein [Pediculu	0.412	0.328	0.718	2e-86
350418057	607	PREDICTED: PAB-dependent poly(A)-specifi	0.373	0.299	0.731	4e-86
332025542	662	PAB-dependent poly(A)-specific ribonucle	0.353	0.259	0.743	3e-85
307213398	609	PAB-dependent poly(A)-specific ribonucle	0.406	0.325	0.758	7e-85
345494958	613	PREDICTED: PAB-dependent poly(A)-specifi	0.367	0.292	0.721	8e-85
322787097	625	hypothetical protein SINV_05900 [Solenop	0.357	0.278	0.731	3e-84

>gi|340715808|ref|XP_003396400.1| PREDICTED: PAB-dependent poly(A)-specific ribonuclease subunit 3-like [Bombus terrestris]

 Score =  330 bits (846), Expect = 9e-88,   Method: Compositional matrix adjust.
 Identities = 151/202 (74%), Positives = 179/202 (88%)

Query: 114 HDLQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQKRT 173
           H  Q+DL ALGKL+LA+ CRSL+AV R+N+Q S++L+ RSYSADLRNLILYLLS   +R+
Sbjct: 402 HYQQEDLIALGKLVLALACRSLLAVHRDNMQASLELVTRSYSADLRNLILYLLSNQARRS 461

Query: 174 VVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPT 233
           V DLMPMIGAR+YTQLDA QL  D LENELSKE+ENGRLF+LLVKLGTINERP+LN++PT
Sbjct: 462 VTDLMPMIGARFYTQLDAAQLRSDVLENELSKELENGRLFKLLVKLGTINERPDLNMEPT 521

Query: 234 WSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVL 293
           W+ETGDRYMLKLFRDY+ HQV  DGRPWLDM+H+V CLNKLD+G+Q+K+CLMSRDEQS+L
Sbjct: 522 WAETGDRYMLKLFRDYVFHQVAADGRPWLDMAHVVSCLNKLDSGSQDKVCLMSRDEQSIL 581

Query: 294 VVSYAELKQCLDQSFHELSSSA 315
           VVSYAEL+QCL+ SF EL  SA
Sbjct: 582 VVSYAELRQCLETSFGELIQSA 603

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383864398|ref|XP_003707666.1| PREDICTED: PAB-dependent poly(A)-specific ribonuclease subunit 3-like [Megachile rotundata]

 Score =  329 bits (843), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 152/202 (75%), Positives = 178/202 (88%)

Query: 114 HDLQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQKRT 173
           H  Q+DL ALGKL+LA+ CRSL+AV R+N+Q S++L+ARSYS DLRNLILYLLS   +R+
Sbjct: 401 HYQQEDLIALGKLVLALACRSLLAVHRDNMQASLELVARSYSTDLRNLILYLLSNQARRS 460

Query: 174 VVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPT 233
           V DLMPMIGAR+YTQLDA QL  D LENEL+KE+ENGRLF+LLVKL TINERPELN++PT
Sbjct: 461 VTDLMPMIGARFYTQLDAAQLRSDVLENELAKELENGRLFKLLVKLATINERPELNMEPT 520

Query: 234 WSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVL 293
           W+ETGDRYMLKLFRDY+ HQV  DGRPWLDM+H+V CLNKLD+G+Q+KICLMSRDEQSVL
Sbjct: 521 WAETGDRYMLKLFRDYVFHQVAADGRPWLDMAHVVSCLNKLDSGSQDKICLMSRDEQSVL 580

Query: 294 VVSYAELKQCLDQSFHELSSSA 315
           VVSYAEL+QCL+ SF EL  SA
Sbjct: 581 VVSYAELRQCLETSFGELVQSA 602

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380019400|ref|XP_003693595.1| PREDICTED: PAB-dependent poly(A)-specific ribonuclease subunit 3-like [Apis florea]

 Score =  328 bits (842), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 152/205 (74%), Positives = 179/205 (87%)

Query: 114 HDLQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQKRT 173
           H  Q+DL ALGKL+LA+ CRSL+AV R+N+Q S++L+ARSYS DLRNLILYLLS   +++
Sbjct: 401 HYQQEDLIALGKLVLALACRSLLAVHRDNMQASLELVARSYSTDLRNLILYLLSNQARKS 460

Query: 174 VVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPT 233
           V DLMPMIGAR+YTQLDA QL  D LENEL+KE+ENGRLF+LLVKL TINERPELN++PT
Sbjct: 461 VTDLMPMIGARFYTQLDAAQLRSDVLENELAKELENGRLFKLLVKLATINERPELNMEPT 520

Query: 234 WSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVL 293
           W+ETGDRYMLKLFRDY+ HQV  DGRPWLDM+H+V CLNKLD+G+Q+KICLMSRDEQSVL
Sbjct: 521 WAETGDRYMLKLFRDYVFHQVAADGRPWLDMAHVVSCLNKLDSGSQDKICLMSRDEQSVL 580

Query: 294 VVSYAELKQCLDQSFHELSSSASLT 318
           VVSYAEL+QCL+ SF EL  SA  T
Sbjct: 581 VVSYAELRQCLETSFGELVQSAKET 605

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|66500005|ref|XP_623553.1| PREDICTED: PAB-dependent poly(A)-specific ribonuclease subunit 3-like [Apis mellifera]

 Score =  328 bits (842), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 152/205 (74%), Positives = 179/205 (87%)

Query: 114 HDLQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQKRT 173
           H  Q+DL ALGKL+LA+ CRSL+AV R+N+Q S++L+ARSYS DLRNLILYLLS   +++
Sbjct: 402 HYQQEDLIALGKLVLALACRSLLAVHRDNMQASLELVARSYSTDLRNLILYLLSNQARKS 461

Query: 174 VVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPT 233
           V DLMPMIGAR+YTQLDA QL  D LENEL+KE+ENGRLF+LLVKL TINERPELN++PT
Sbjct: 462 VTDLMPMIGARFYTQLDAAQLRSDVLENELAKELENGRLFKLLVKLATINERPELNMEPT 521

Query: 234 WSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVL 293
           W+ETGDRYMLKLFRDY+ HQV  DGRPWLDM+H+V CLNKLD+G+Q+KICLMSRDEQSVL
Sbjct: 522 WAETGDRYMLKLFRDYVFHQVAADGRPWLDMAHVVSCLNKLDSGSQDKICLMSRDEQSVL 581

Query: 294 VVSYAELKQCLDQSFHELSSSASLT 318
           VVSYAEL+QCL+ SF EL  SA  T
Sbjct: 582 VVSYAELRQCLETSFGELVQSAKET 606

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242022354|ref|XP_002431605.1| conserved hypothetical protein [Pediculus humanus corporis] gi|212516913|gb|EEB18867.1| conserved hypothetical protein [Pediculus humanus corporis]

 Score =  326 bits (836), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 148/206 (71%), Positives = 183/206 (88%)

Query: 114 HDLQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQKRT 173
           H  Q+DLTALGKL+LA++C+SL+AVQREN+QTS+DL+ R+YS+DL+NLI+YLL   ++RT
Sbjct: 404 HYQQEDLTALGKLVLALSCKSLLAVQRENIQTSLDLVGRTYSSDLKNLIVYLLHNQKRRT 463

Query: 174 VVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPT 233
           V DLMPMIGAR+Y QL+ +Q + D +ENEL+KE++NGRL RLL KLGTINERPEL+LDP+
Sbjct: 464 VTDLMPMIGARFYAQLETIQTYADDIENELTKEIDNGRLCRLLAKLGTINERPELSLDPS 523

Query: 234 WSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVL 293
           WSETGDRYMLKLFRDY+ HQV EDGRPWL+M+HIV CLNKLD+G+ EKICLMSRDEQSVL
Sbjct: 524 WSETGDRYMLKLFRDYIFHQVTEDGRPWLEMAHIVQCLNKLDSGSLEKICLMSRDEQSVL 583

Query: 294 VVSYAELKQCLDQSFHELSSSASLTP 319
           VVSY ELK CL+QSF+E+ +SA+  P
Sbjct: 584 VVSYEELKHCLEQSFNEVVTSATEKP 609

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350418057|ref|XP_003491713.1| PREDICTED: PAB-dependent poly(A)-specific ribonuclease subunit 3-like [Bombus impatiens]

 Score =  325 bits (832), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 147/201 (73%), Positives = 178/201 (88%)

Query: 114 HDLQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQKRT 173
           H  Q+DL ALGKL+LA+ CRSL++V R+N+Q S++L+ARSYSADLRNLILYLLS   +R+
Sbjct: 402 HYQQEDLIALGKLVLALACRSLLSVHRDNMQASLELVARSYSADLRNLILYLLSNQARRS 461

Query: 174 VVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPT 233
           V DLMPMIGAR+YTQLDA QL  D LENEL+KE+ENGRLF+LLVKL TINERP+LN++PT
Sbjct: 462 VTDLMPMIGARFYTQLDAAQLKSDILENELAKELENGRLFKLLVKLSTINERPDLNMEPT 521

Query: 234 WSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVL 293
           W+ETGDRYMLKLFRDY+ HQV  DGRPWLDM+H++ CLNKLD+G+Q+K+CLMSRDEQS+L
Sbjct: 522 WAETGDRYMLKLFRDYVFHQVAADGRPWLDMAHVISCLNKLDSGSQDKVCLMSRDEQSIL 581

Query: 294 VVSYAELKQCLDQSFHELSSS 314
           VVSYAEL+QCL+ SF EL  S
Sbjct: 582 VVSYAELRQCLETSFGELVQS 602

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332025542|gb|EGI65705.1| PAB-dependent poly(A)-specific ribonuclease subunit 3 [Acromyrmex echinatior]

 Score =  322 bits (825), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 148/199 (74%), Positives = 175/199 (87%)

Query: 114 HDLQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQKRT 173
           H  Q+DL ALGKL+LA+ CRSL+AV R+N+  SI+L+ RSYS DLRNLILYLLS   +++
Sbjct: 403 HYQQEDLVALGKLVLALACRSLIAVHRDNMSASIELITRSYSTDLRNLILYLLSNQSRKS 462

Query: 174 VVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPT 233
           V DLMPMIGAR+YTQLDA QL  D LENEL+KE+ENGRLF+LLVKL TINERPELN++PT
Sbjct: 463 VTDLMPMIGARFYTQLDAAQLRLDVLENELAKELENGRLFKLLVKLATINERPELNMEPT 522

Query: 234 WSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVL 293
           W+ETGDRYMLKLFRDY+ HQV  DGRPWLD++H+V CLNKLD+G+Q+KICLMSRDEQSVL
Sbjct: 523 WAETGDRYMLKLFRDYVFHQVTADGRPWLDLAHVVSCLNKLDSGSQDKICLMSRDEQSVL 582

Query: 294 VVSYAELKQCLDQSFHELS 312
           VVSYAEL+QCL+ SF ELS
Sbjct: 583 VVSYAELRQCLETSFDELS 601

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307213398|gb|EFN88834.1| PAB-dependent poly(A)-specific ribonuclease subunit 3 [Harpegnathos saltator]

 Score =  321 bits (822), Expect = 7e-85,   Method: Compositional matrix adjust.
 Identities = 151/199 (75%), Positives = 173/199 (86%), Gaps = 1/199 (0%)

Query: 114 HDLQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVH-QKR 172
           H  Q+DL ALGKL+LA+ CRSL+AV R+N+  SIDL+ RSYSADLRNLILYLLS   ++R
Sbjct: 403 HYQQEDLVALGKLVLALACRSLIAVHRDNMSASIDLITRSYSADLRNLILYLLSSQDRRR 462

Query: 173 TVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDP 232
           TV DLMPMIGAR+YTQLDA QL  D LENEL+KE+ENGRLFRLLVKL TINERPEL++DP
Sbjct: 463 TVTDLMPMIGARFYTQLDAAQLRSDVLENELAKELENGRLFRLLVKLATINERPELSMDP 522

Query: 233 TWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSV 292
           TW+ETGDRYMLKLFRDY+ HQV  DGRPWLDM+H+V CLNKLD+G+ +KICLMSRDEQ V
Sbjct: 523 TWAETGDRYMLKLFRDYVFHQVTADGRPWLDMAHVVACLNKLDSGSSDKICLMSRDEQCV 582

Query: 293 LVVSYAELKQCLDQSFHEL 311
           LVVSY EL+Q LDQSF EL
Sbjct: 583 LVVSYVELRQNLDQSFAEL 601

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|345494958|ref|XP_001604971.2| PREDICTED: PAB-dependent poly(A)-specific ribonuclease subunit 3-like [Nasonia vitripennis]

 Score =  320 bits (821), Expect = 8e-85,   Method: Compositional matrix adjust.
 Identities = 145/201 (72%), Positives = 175/201 (87%)

Query: 114 HDLQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQKRT 173
           H  Q+DL ALGKL+LA+ CRSL+AV R+N+Q S++L+AR+YS DLRNLILYLLS   +R+
Sbjct: 404 HYQQEDLIALGKLVLALACRSLLAVHRDNMQASLELVARTYSTDLRNLILYLLSNQARRS 463

Query: 174 VVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPT 233
           V DLMPMIGAR+YTQLDA QL  D LENEL+KE+ENGRLFRL+VKL TINERPELNLDP 
Sbjct: 464 VTDLMPMIGARFYTQLDAAQLCSDVLENELTKELENGRLFRLIVKLSTINERPELNLDPQ 523

Query: 234 WSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVL 293
           WSETGDRYMLKLFRDY+ HQV  DGRPWLD++H+V CLNKLD G+ +KICL+SRDEQSVL
Sbjct: 524 WSETGDRYMLKLFRDYVFHQVTADGRPWLDLAHVVSCLNKLDVGSPDKICLISRDEQSVL 583

Query: 294 VVSYAELKQCLDQSFHELSSS 314
           +VSYAEL+ C++ SF+EL+ +
Sbjct: 584 IVSYAELRHCMETSFNELAQA 604

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|322787097|gb|EFZ13318.1| hypothetical protein SINV_05900 [Solenopsis invicta]

 Score =  318 bits (816), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 147/201 (73%), Positives = 174/201 (86%)

Query: 114 HDLQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQKRT 173
           H  Q+DL ALGKL+LA+ CRSL+AV R+N+  SI+L+ RSYS DLRNLILYLLS   +++
Sbjct: 420 HYQQEDLVALGKLVLALACRSLIAVHRDNMSASIELITRSYSTDLRNLILYLLSNQPRKS 479

Query: 174 VVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPT 233
           V DLMPMIGAR+YTQLDA QL  D  ENEL+KE+ENGRLF+LLVKL TINERPELN++PT
Sbjct: 480 VTDLMPMIGARFYTQLDAAQLRLDVYENELAKELENGRLFKLLVKLATINERPELNMEPT 539

Query: 234 WSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVL 293
           W+ETGDRYMLKLFRDY+ HQV  DGRPWLD++H+V CLNKLD+G+Q+KICLMSRDEQSVL
Sbjct: 540 WAETGDRYMLKLFRDYVFHQVTADGRPWLDLAHVVACLNKLDSGSQDKICLMSRDEQSVL 599

Query: 294 VVSYAELKQCLDQSFHELSSS 314
           VVSYAEL+QCL+ SF EL  S
Sbjct: 600 VVSYAELRQCLETSFGELVQS 620

Source: Solenopsis invicta

Species: Solenopsis invicta

Genus: Solenopsis

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	487
FB|FBgn0035397	790	CG11486 [Drosophila melanogast	0.429	0.264	0.685	5.7e-86
UNIPROTKB|J9PBG4	906	PAN3 "Uncharacterized protein"	0.410	0.220	0.631	1.7e-80
UNIPROTKB|F1RSU6	887	PAN3 "Uncharacterized protein"	0.410	0.225	0.631	1.2e-79
UNIPROTKB|F1PKU0	887	PAN3 "Uncharacterized protein"	0.410	0.225	0.631	2e-79
UNIPROTKB|Q58A45	887	PAN3 "PAB-dependent poly(A)-sp	0.410	0.225	0.631	2e-79
UNIPROTKB|F1MVV2	657	PAN3 "Uncharacterized protein"	0.410	0.304	0.631	2e-79
RGD|1590880	691	Pan3 "PAN3 polyA specific ribo	0.422	0.298	0.618	2e-79
MGI|MGI:1919837	837	Pan3 "PAN3 polyA specific ribo	0.410	0.238	0.631	2.5e-79
ZFIN|ZDB-GENE-070928-13	799	pan3 "PAN3 poly(A) specific ri	0.410	0.250	0.641	3.2e-79
UNIPROTKB|F1P381	738	PAN3 "Uncharacterized protein"	0.410	0.271	0.631	9.5e-78

FB|FBgn0035397 CG11486 [Drosophila melanogaster (taxid:7227)]

 Score = 761 (272.9 bits), Expect = 5.7e-86, Sum P(2) = 5.7e-86
 Identities = 144/210 (68%), Positives = 176/210 (83%)

Query:   107 PLEVDNYHDLQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLL 166
             PL + N H  QDDLTALG+L+LA+ CR L +VQR+N+Q+SID++ R+YS DLRN I+YL 
Sbjct:   581 PLALVNMHQ-QDDLTALGRLVLALACRCLQSVQRDNVQSSIDMVTRNYSTDLRNFIVYLF 639

Query:   167 SVHQKRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERP 226
             + + +R+V DLMPMIGAR+YTQLDA+Q   D  E+EL+KEMENGRL+R+LVKL +INERP
Sbjct:   640 TTNNRRSVTDLMPMIGARFYTQLDALQSKIDMQEDELAKEMENGRLYRILVKLNSINERP 699

Query:   227 ELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMS 286
             + NLD TWSETGDRYMLKLFRDYL H V EDGRPWLD +HIV CLNKLDAG+ E++ LMS
Sbjct:   700 DFNLDCTWSETGDRYMLKLFRDYLFHSVTEDGRPWLDHAHIVQCLNKLDAGSIERVQLMS 759

Query:   287 RDEQSVLVVSYAELKQCLDQSFHELSSSAS 316
             RDEQSVL+VSYAELK CL+ +F EL SSA+
Sbjct:   760 RDEQSVLIVSYAELKNCLENAFSELMSSAA 789

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IKR

GO:0004672 "protein kinase activity" evidence=IKR

GO:0005515 "protein binding" evidence=IPI

UNIPROTKB|J9PBG4 PAN3 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 688 (247.2 bits), Expect = 1.7e-80, Sum P(2) = 1.7e-80
 Identities = 127/201 (63%), Positives = 166/201 (82%)

Query:   117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQK-RTVV 175
             Q DL +LGK++LA+ C SL  +QRENLQ +++L+  +YS+DL+NLILYLL+   + R+V 
Sbjct:   703 QADLISLGKVVLALACNSLAGIQRENLQKAMELVTINYSSDLKNLILYLLTDQNRMRSVN 762

Query:   176 DLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWS 235
             D+MPMIGAR+YTQLDA Q+  D +E +L+KE++NGRLFRLL KLGTINERPE   DPTWS
Sbjct:   763 DIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAKLGTINERPEFQKDPTWS 822

Query:   236 ETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVV 295
             ETGDRY+LKLFRD+L HQV E G PW+D+SHI+ CLNKLDAG  EKI L+SRDE+SVLVV
Sbjct:   823 ETGDRYLLKLFRDHLFHQVTEAGAPWIDLSHIISCLNKLDAGVPEKISLISRDEKSVLVV 882

Query:   296 SYAELKQCLDQSFHELSSSAS 316
             +Y++LK+C + +F EL ++A+
Sbjct:   883 TYSDLKRCFENTFQELIAAAN 903

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0004672 "protein kinase activity" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|F1RSU6 PAN3 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 688 (247.2 bits), Expect = 1.2e-79, Sum P(2) = 1.2e-79
 Identities = 127/201 (63%), Positives = 166/201 (82%)

Query:   117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQK-RTVV 175
             Q DL +LGK++LA+ C SL  +QRENLQ +++L+  +YS+DL+NLILYLL+   + R+V 
Sbjct:   684 QADLISLGKVVLALACNSLAGIQRENLQKAMELVTINYSSDLKNLILYLLTDQNRMRSVN 743

Query:   176 DLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWS 235
             D+MPMIGAR+YTQLDA Q+  D +E +L+KE++NGRLFRLL KLGTINERPE   DPTWS
Sbjct:   744 DIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAKLGTINERPEFQKDPTWS 803

Query:   236 ETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVV 295
             ETGDRY+LKLFRD+L HQV E G PW+D+SHI+ CLNKLDAG  EKI L+SRDE+SVLVV
Sbjct:   804 ETGDRYLLKLFRDHLFHQVTEAGAPWIDLSHIISCLNKLDAGVPEKISLISRDEKSVLVV 863

Query:   296 SYAELKQCLDQSFHELSSSAS 316
             +Y++LK+C + +F EL ++A+
Sbjct:   864 TYSDLKRCFENTFQELIAAAN 884

GO:0010606 "positive regulation of cytoplasmic mRNA processing body assembly" evidence=IEA

GO:0006605 "protein targeting" evidence=IEA

GO:0005813 "centrosome" evidence=IEA

GO:0000932 "cytoplasmic mRNA processing body" evidence=IEA

GO:0000290 "deadenylation-dependent decapping of nuclear-transcribed mRNA" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0004672 "protein kinase activity" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|F1PKU0 PAN3 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 688 (247.2 bits), Expect = 2.0e-79, Sum P(2) = 2.0e-79
 Identities = 127/201 (63%), Positives = 166/201 (82%)

Query:   117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQK-RTVV 175
             Q DL +LGK++LA+ C SL  +QRENLQ +++L+  +YS+DL+NLILYLL+   + R+V 
Sbjct:   684 QADLISLGKVVLALACNSLAGIQRENLQKAMELVTINYSSDLKNLILYLLTDQNRMRSVN 743

Query:   176 DLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWS 235
             D+MPMIGAR+YTQLDA Q+  D +E +L+KE++NGRLFRLL KLGTINERPE   DPTWS
Sbjct:   744 DIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAKLGTINERPEFQKDPTWS 803

Query:   236 ETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVV 295
             ETGDRY+LKLFRD+L HQV E G PW+D+SHI+ CLNKLDAG  EKI L+SRDE+SVLVV
Sbjct:   804 ETGDRYLLKLFRDHLFHQVTEAGAPWIDLSHIISCLNKLDAGVPEKISLISRDEKSVLVV 863

Query:   296 SYAELKQCLDQSFHELSSSAS 316
             +Y++LK+C + +F EL ++A+
Sbjct:   864 TYSDLKRCFENTFQELIAAAN 884

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0004672 "protein kinase activity" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|Q58A45 PAN3 "PAB-dependent poly(A)-specific ribonuclease subunit 3" [Homo sapiens (taxid:9606)]

 Score = 688 (247.2 bits), Expect = 2.0e-79, Sum P(2) = 2.0e-79
 Identities = 127/201 (63%), Positives = 166/201 (82%)

Query:   117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQK-RTVV 175
             Q DL +LGK++LA+ C SL  +QRENLQ +++L+  +YS+DL+NLILYLL+   + R+V 
Sbjct:   684 QADLISLGKVVLALACNSLAGIQRENLQKAMELVTINYSSDLKNLILYLLTDQNRMRSVN 743

Query:   176 DLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWS 235
             D+MPMIGAR+YTQLDA Q+  D +E +L+KE++NGRLFRLL KLGTINERPE   DPTWS
Sbjct:   744 DIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAKLGTINERPEFQKDPTWS 803

Query:   236 ETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVV 295
             ETGDRY+LKLFRD+L HQV E G PW+D+SHI+ CLNKLDAG  EKI L+SRDE+SVLVV
Sbjct:   804 ETGDRYLLKLFRDHLFHQVTEAGAPWIDLSHIISCLNKLDAGVPEKISLISRDEKSVLVV 863

Query:   296 SYAELKQCLDQSFHELSSSAS 316
             +Y++LK+C + +F EL ++A+
Sbjct:   864 TYSDLKRCFENTFQELIAAAN 884

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0000184 "nuclear-transcribed mRNA catabolic process, nonsense-mediated decay" evidence=IEA

GO:0000290 "deadenylation-dependent decapping of nuclear-transcribed mRNA" evidence=IEA

GO:0000932 "cytoplasmic mRNA processing body" evidence=IEA

GO:0006605 "protein targeting" evidence=IEA

GO:0010606 "positive regulation of cytoplasmic mRNA processing body assembly" evidence=IEA

GO:0000288 "nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay" evidence=TAS

GO:0000289 "nuclear-transcribed mRNA poly(A) tail shortening" evidence=TAS

GO:0005829 "cytosol" evidence=TAS

GO:0010467 "gene expression" evidence=TAS

GO:0016070 "RNA metabolic process" evidence=TAS

GO:0016071 "mRNA metabolic process" evidence=TAS

GO:0005813 "centrosome" evidence=IDA

UNIPROTKB|F1MVV2 PAN3 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 688 (247.2 bits), Expect = 2.0e-79, Sum P(2) = 2.0e-79
 Identities = 127/201 (63%), Positives = 166/201 (82%)

Query:   117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQK-RTVV 175
             Q DL +LGK++LA+ C SL  +QRENLQ +++L+  +YS+DL+NLILYLL+   + R+V 
Sbjct:   454 QADLISLGKVVLALACNSLAGIQRENLQKAMELVTINYSSDLKNLILYLLTDQNRMRSVN 513

Query:   176 DLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWS 235
             D+MPMIGAR+YTQLDA Q+  D +E +L+KE++NGRLFRLL KLGTINERPE   DPTWS
Sbjct:   514 DIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAKLGTINERPEFQKDPTWS 573

Query:   236 ETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVV 295
             ETGDRY+LKLFRD+L HQV E G PW+D+SHI+ CLNKLDAG  EKI L+SRDE+SVLVV
Sbjct:   574 ETGDRYLLKLFRDHLFHQVTEAGAPWIDLSHIISCLNKLDAGVPEKISLISRDEKSVLVV 633

Query:   296 SYAELKQCLDQSFHELSSSAS 316
             +Y++LK+C + +F EL ++A+
Sbjct:   634 TYSDLKRCFENTFQELIAAAN 654

GO:0010606 "positive regulation of cytoplasmic mRNA processing body assembly" evidence=IEA

GO:0006605 "protein targeting" evidence=IEA

GO:0005813 "centrosome" evidence=IEA

GO:0000932 "cytoplasmic mRNA processing body" evidence=IEA

GO:0000290 "deadenylation-dependent decapping of nuclear-transcribed mRNA" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0004672 "protein kinase activity" evidence=IEA

RGD|1590880 Pan3 "PAN3 polyA specific ribonuclease subunit homolog (S. cerevisiae)" [Rattus norvegicus (taxid:10116)]

 Score = 688 (247.2 bits), Expect = 2.0e-79, Sum P(2) = 2.0e-79
 Identities = 128/207 (61%), Positives = 168/207 (81%)

Query:   117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQK-RTVV 175
             Q DL +LGK++LA+ C SL  +QRENLQ +++L+  +YS+DL+NLILYLL+   + R+V 
Sbjct:   484 QADLISLGKVVLALACNSLAGIQRENLQKAMELVTINYSSDLKNLILYLLTDQNRMRSVN 543

Query:   176 DLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWS 235
             D+MPMIGAR+YTQLDA Q+  D +E +L+KE++NGRLFRLL KLGTINERPE   DPTWS
Sbjct:   544 DIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAKLGTINERPEFQKDPTWS 603

Query:   236 ETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVV 295
             ETGDRY+LKLFRD+L HQV E G PW+D+SHI+ CLNKLDAG  EKI L SRDE+SVLVV
Sbjct:   604 ETGDRYLLKLFRDHLFHQVTEAGAPWIDLSHIISCLNKLDAGVPEKISLTSRDEKSVLVV 663

Query:   296 SYAELKQCLDQSFHELSSSASLTPKST 322
             +Y++LK+C + +F EL ++A+   +S+
Sbjct:   664 TYSDLKRCFENTFQELIAAANGNDRSS 690

GO:0000290 "deadenylation-dependent decapping of nuclear-transcribed mRNA" evidence=ISO

GO:0000932 "cytoplasmic mRNA processing body" evidence=ISO

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005813 "centrosome" evidence=ISO

GO:0006605 "protein targeting" evidence=ISO

GO:0010606 "positive regulation of cytoplasmic mRNA processing body assembly" evidence=ISO

MGI|MGI:1919837 Pan3 "PAN3 polyA specific ribonuclease subunit homolog (S. cerevisiae)" [Mus musculus (taxid:10090)]

 Score = 688 (247.2 bits), Expect = 2.5e-79, Sum P(2) = 2.5e-79
 Identities = 127/201 (63%), Positives = 166/201 (82%)

Query:   117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQK-RTVV 175
             Q DL +LGK++LA+ C SL  +QRENLQ +++L+  +YS+DL+NLILYLL+   + R+V 
Sbjct:   630 QADLISLGKVVLALACNSLAGIQRENLQKAMELVTINYSSDLKNLILYLLTDQNRMRSVN 689

Query:   176 DLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWS 235
             D+MPMIGAR+YTQLDA Q+  D +E +L+KE++NGRLFRLL KLGTINERPE   DPTWS
Sbjct:   690 DIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAKLGTINERPEFQKDPTWS 749

Query:   236 ETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVV 295
             ETGDRY+LKLFRD+L HQV E G PW+D+SHI+ CLNKLDAG  EKI L+SRDE+SVLVV
Sbjct:   750 ETGDRYLLKLFRDHLFHQVTEAGAPWIDLSHIISCLNKLDAGVPEKISLISRDEKSVLVV 809

Query:   296 SYAELKQCLDQSFHELSSSAS 316
             +Y++LK+C + +F EL ++A+
Sbjct:   810 TYSDLKRCFENTFQELIAAAN 830

GO:0000184 "nuclear-transcribed mRNA catabolic process, nonsense-mediated decay" evidence=IEA

GO:0000290 "deadenylation-dependent decapping of nuclear-transcribed mRNA" evidence=IMP

GO:0000932 "cytoplasmic mRNA processing body" evidence=IDA

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

GO:0005524 "ATP binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0006605 "protein targeting" evidence=IDA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0010606 "positive regulation of cytoplasmic mRNA processing body assembly" evidence=IMP;IDA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

ZFIN|ZDB-GENE-070928-13 pan3 "PAN3 poly(A) specific ribonuclease subunit homolog (S. cerevisiae)" [Danio rerio (taxid:7955)]

 Score = 692 (248.7 bits), Expect = 3.2e-79, Sum P(2) = 3.2e-79
 Identities = 129/201 (64%), Positives = 167/201 (83%)

Query:   117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQK-RTVV 175
             Q DL +LGK++LA+ C SL  +QRENLQ +++L++ +YS+DL+NLILYLLS   + R+V 
Sbjct:   596 QADLISLGKVVLALACNSLAGIQRENLQKAMELVSINYSSDLKNLILYLLSEQSRLRSVN 655

Query:   176 DLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWS 235
             D+MPMIGAR+YTQLDA Q+  D +E +L+KE++NGRLFRLL KLGTINERPE   DPTWS
Sbjct:   656 DIMPMIGARFYTQLDASQMRNDVIEEDLAKEVQNGRLFRLLAKLGTINERPEFQKDPTWS 715

Query:   236 ETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVV 295
             ETGDRY+LKLFRD+L HQV E G PW+D+SHIV CLNKLDAG  EKI L+SRDE+SVLVV
Sbjct:   716 ETGDRYLLKLFRDHLFHQVTETGTPWVDLSHIVSCLNKLDAGVPEKISLVSRDEKSVLVV 775

Query:   296 SYAELKQCLDQSFHELSSSAS 316
             +Y++LK+C + +F EL ++A+
Sbjct:   776 TYSDLKRCFESTFQELLATAN 796

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

UNIPROTKB|F1P381 PAN3 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 689 (247.6 bits), Expect = 9.5e-78, Sum P(2) = 9.5e-78
 Identities = 127/201 (63%), Positives = 166/201 (82%)

Query:   117 QDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQK-RTVV 175
             Q DL +LGK++LA+ C SL  +QRENLQ +++L+  +YS+DL+NLILYLL+   + R+V 
Sbjct:   535 QTDLISLGKVVLALACNSLSGIQRENLQKAMELVTINYSSDLKNLILYLLTDQNRLRSVN 594

Query:   176 DLMPMIGARYYTQLDAVQLHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWS 235
             D+MPMIGAR+YTQLDA Q+  D +E +L+KE++NGRLFRLL KLGTINERPE   DPTWS
Sbjct:   595 DIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAKLGTINERPEFQKDPTWS 654

Query:   236 ETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSVLVV 295
             ETGDRY+LKLFRD+L HQV E G PW+D+SHI+ CLNKLDAG  EKI L+SRDE+SVLVV
Sbjct:   655 ETGDRYLLKLFRDHLFHQVTEAGTPWIDLSHIISCLNKLDAGVPEKISLISRDEKSVLVV 714

Query:   296 SYAELKQCLDQSFHELSSSAS 316
             +Y++LK+C + +F EL ++A+
Sbjct:   715 TYSDLKRCFENTFQELIAAAN 735

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0000290 "deadenylation-dependent decapping of nuclear-transcribed mRNA" evidence=IEA

GO:0000932 "cytoplasmic mRNA processing body" evidence=IEA

GO:0005813 "centrosome" evidence=IEA

GO:0006605 "protein targeting" evidence=IEA

GO:0010606 "positive regulation of cytoplasmic mRNA processing body assembly" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
P0CD65	PAN3_DICDI	No assigned EC number	0.5323	0.4086	0.2667	yes	N/A
Q640Q5	PAN3_MOUSE	No assigned EC number	0.6318	0.4106	0.2389	yes	N/A
A1L1C7	PAN3_XENTR	No assigned EC number	0.6318	0.4106	0.2541	yes	N/A
P0CP50	PAN3_CRYNJ	No assigned EC number	0.5172	0.4065	0.2894	yes	N/A
Q58A45	PAN3_HUMAN	No assigned EC number	0.6318	0.4106	0.2254	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	487
KOG3741|consensus	655		100.0
KOG3741|consensus	655		100.0

>KOG3741|consensus

Probab=100.00  E-value=2.5e-81  Score=658.13  Aligned_cols=194  Identities=54%  Similarity=0.954  Sum_probs=190.2

Q ss_pred             hHHHHHHHHHHHHHHhcCCchhhhhccHHHH-HHHHhhhcCHHHHHHHHHHhccCCc-CCHHHHHHHHHHHHHHHHHHHH
Q psy1282         116 LQDDLTALGKLILAMTCRSLMAVQRENLQTS-IDLMARSYSADLRNLILYLLSVHQK-RTVVDLMPMIGARYYTQLDAVQ  193 (487)
Q Consensus       116 QqeDl~~lG~LiLaLA~~~~~a~~~~n~~~s-l~~~~~~yS~dl~~~i~~Lls~~~~-k~i~~l~~~I~~r~~~~~d~~~  193 (487)
                      ||+|+++||.||++|||++.++.++++.+++ ++.+.++||.||+++|.||.+...+ |+|++|||||++|||++|+++|
T Consensus       455 Qq~D~~~lG~ll~aLAt~~~ns~~~d~~~~s~~~~I~~~yS~D~rn~v~yl~s~~~~~ksI~~llp~~~~~ff~vmes~q  534 (655)
T KOG3741|consen  455 QQNDLRDLGLLLLALATGTENSNRTDSTQSSHLTRITTTYSTDLRNVVEYLESLNFREKSIQDLLPMIGSRFFTVMESVQ  534 (655)
T ss_pred             hhhhHHHHHHHHHHHhhcccccccccchHHHHHHHhhhhhhHHHHHHHHHHHhcCcccccHHHHHHHHHHHHHHHHHhHH
Confidence            9999999999999999999888887888877 9999999999999999999998876 9999999999999999999999


Q ss_pred             hhhhhHHHHHHHHhhhchHHHHHHhhcccccCCCCCCCCCCCcccchhHHHhhhhhcccccCCCCCcccChHHHHHHhhh
Q psy1282         194 LHGDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNK  273 (487)
Q Consensus       194 ~~~D~lE~eLs~ElENGRLfRLL~KL~fI~eRpE~~~D~~WSEtGdRYlLKLFRDYVFHQVDe~G~PvlDL~HVl~cLNK  273 (487)
                      ..+|++|.+|+||+||||||||++|||||+||||+..|+.|||+||||+|||||||||||||+||+||+|++|||+||||
T Consensus       535 ~~~d~mE~~Ls~emENGRLfRll~Kln~I~dR~e~~~D~~WSesG~~fmi~LFRDYlFHqvtedg~p~lDlaHvl~CLNK  614 (655)
T KOG3741|consen  535 LKTDVMETELSREMENGRLFRLLLKLNFIDDRPEYVDDPDWSESGDRFMIKLFRDYLFHQVTEDGKPWLDLAHVLQCLNK  614 (655)
T ss_pred             HHHHHHHHHHHHHHhcchHHHHHHHHhhhccCcccccCCcchhccceehHHHHHHhhheEeccCCChhhhHHHHHHHhhh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccCCCcceEEEeecCCCeEEEEeHHHHHHHHHHHHH
Q psy1282         274 LDAGTQEKICLMSRDEQSVLVVSYAELKQCLDQSFH  309 (487)
Q Consensus       274 LDaG~dEKI~LvSRDE~sclVVSYkELK~~id~aF~  309 (487)
                      ||||++|||+||||||.+||||||||||+|||++||
T Consensus       615 LDAG~~EkI~LvSrDE~t~IIvSY~ELK~~le~t~~  650 (655)
T KOG3741|consen  615 LDAGIQEKILLVSRDELTCIIVSYKELKTILEKTFR  650 (655)
T ss_pred             ccccchhheeEeccCCCcEEEEEHHHHHHHHHHhhc
Confidence            999999999999999999999999999999999998

>KOG3741|consensus

Probab=100.00  E-value=3.3e-60  Score=498.96  Aligned_cols=177  Identities=52%  Similarity=0.884  Sum_probs=162.0

Q ss_pred             cCCCeEEEEeHHHH-HHHHHHHHHHHhhccCCCCCCCcceEeecCCCc-CCHHHHhhhHHHHHHHHHhHHHhhhhhhHHH
Q psy1282         287 RDEQSVLVVSYAEL-KQCLDQSFHELSSSASLTPKSTLPLYLLSVHQK-RTVVDLMPMIGARYYTQLDAVQLHGDSLENE  364 (487)
Q Consensus       287 RDE~sclVVSYkEL-K~~id~aF~eL~~~s~ss~k~n~~~~Lls~~~~-k~i~~l~~~i~~r~~~~~d~~~~~~D~le~~  364 (487)
                      +-|++.---+|++. ++.|...        ++.+.++++.||.+...+ |+|.+|||||++|||+++++.|..+|++|.+
T Consensus       472 ~~~ns~~~d~~~~s~~~~I~~~--------yS~D~rn~v~yl~s~~~~~ksI~~llp~~~~~ff~vmes~q~~~d~mE~~  543 (655)
T KOG3741|consen  472 GTENSNRTDSTQSSHLTRITTT--------YSTDLRNVVEYLESLNFREKSIQDLLPMIGSRFFTVMESVQLKTDVMETE  543 (655)
T ss_pred             cccccccccchHHHHHHHhhhh--------hhHHHHHHHHHHHhcCcccccHHHHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence            44444455556665 5555444        466677999999985444 9999999999999999999999999999999


Q ss_pred             HHHHhhhchHHHHHHhhcccccCCCCCCCCCCCcccCchHHHhhhhhcccccCCCCCccccHhHHHHhccccCCCCcceE
Q psy1282         365 LSKEMENGRLFRLLVKLGTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQEDGRPWLDMSHIVHCLNKLDAGTQEKI  444 (487)
Q Consensus       365 L~~ElENgRL~RLl~KL~~I~eRpe~~~d~~WsEtGdry~lkLFrDyvFHQvd~~G~pvlDl~HVl~cLNKLDaG~~Eki  444 (487)
                      |+||+||||||||++|||||+||||+..|+.|||+||||+|||||||||||||++|+||||++|||+||||||||++|||
T Consensus       544 Ls~emENGRLfRll~Kln~I~dR~e~~~D~~WSesG~~fmi~LFRDYlFHqvtedg~p~lDlaHvl~CLNKLDAG~~EkI  623 (655)
T KOG3741|consen  544 LSREMENGRLFRLLLKLNFIDDRPEYVDDPDWSESGDRFMIKLFRDYLFHQVTEDGKPWLDLAHVLQCLNKLDAGIQEKI  623 (655)
T ss_pred             HHHHHhcchHHHHHHHHhhhccCcccccCCcchhccceehHHHHHHhhheEeccCCChhhhHHHHHHHhhhccccchhhe
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EeeecCCCeEEEEehHHHHHHHHHHHH
Q psy1282         445 CLMSRDEQSVLVVSYAELKQCLDQSFH  471 (487)
Q Consensus       445 ~LvSrDe~~~lvvSY~elK~~id~aF~  471 (487)
                      +||||||.+||||||||||+|||++|+
T Consensus       624 ~LvSrDE~t~IIvSY~ELK~~le~t~~  650 (655)
T KOG3741|consen  624 LLVSRDELTCIIVSYKELKTILEKTFR  650 (655)
T ss_pred             eEeccCCCcEEEEEHHHHHHHHHHhhc
Confidence            999999999999999999999999999

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	487
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-07

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 52.2 bits (124), Expect = 3e-07
 Identities = 67/475 (14%), Positives = 134/475 (28%), Gaps = 148/475 (31%)

Query: 113 YHDLQDDLTALGKLILAMTCRSLMAVQRENLQTS-IDLMARSYSADLRNLILY-LLSVHQ 170
           Y D+          +    C+ +  + +  L    ID +  S  A    L L+  L   Q
Sbjct: 18  YKDILSVF--EDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQ 75

Query: 171 KRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSKEM---ENGRLFRLLVKLGTIN-ERP 226
           +  V   +  +    Y  L    +  +  +  +   M   +  RL+         N  R 
Sbjct: 76  EEMVQKFVEEVLRINYKFL-MSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRL 134

Query: 227 E---------LNLDPTWSETGDRY-----M---------LKLFRDYLLHQVQEDGRPWLD 263
           +         L L P       +      +         L +   Y +    +    WL+
Sbjct: 135 QPYLKLRQALLELRP------AKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLN 188

Query: 264 MSH------IVHCLNKL-----------------------DAGTQEKICLMSRD-EQSVL 293
           + +      ++  L KL                           + +  L S+  E  +L
Sbjct: 189 LKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLL 248

Query: 294 V---VSYAE-LK----QC--L----DQS-FHELSS-----------SASLTPKSTLPLYL 327
           V   V  A+        C  L     +     LS+           S +LTP     L L
Sbjct: 249 VLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLL 308

Query: 328 LSVHQK-----RTVVDLMP----MIGAR---------YYTQLDAVQLH---GDSLENELS 366
             +  +     R V+   P    +I             +  ++  +L      SL     
Sbjct: 309 KYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEP 368

Query: 367 KEMENGRLFRLL------VKLGTINERPELNLDPTW---SETGDRYMLKLFRDYLLHQVQ 417
            E    ++F  L        +      P + L   W    ++    ++     Y L  V+
Sbjct: 369 AEYR--KMFDRLSVFPPSAHI------PTILLSLIWFDVIKSDVMVVVNKLHKYSL--VE 418

Query: 418 EDGRPWLDMSHIVHCLNKLDAGTQEKICLMSRDEQSV---LVVSYAELKQCLDQS 469
           +      + +  +  +         ++ +   +E ++   +V  Y  + +  D  
Sbjct: 419 KQ---PKESTISIPSI-------YLELKVKLENEYALHRSIVDHY-NIPKTFDSD 462

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	487
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	88.29
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	87.94
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	85.87
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	82.35
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	82.16
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	82.11
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	81.36
2a19_B	284	Interferon-induced, double-stranded RNA-activated	81.28
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	80.8
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	80.53
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	80.47
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	80.44
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	80.42
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	80.16

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=88.29  E-value=0.91  Score=42.99  Aligned_cols=88  Identities=13%  Similarity=0.120  Sum_probs=54.3

Q ss_pred             hhHHHHHHHHHHHHHHhcCCchhhhhccHH---HHHHH----------------------------------HhhhcCHH
Q psy1282         115 DLQDDLTALGKLILAMTCRSLMAVQRENLQ---TSIDL----------------------------------MARSYSAD  157 (487)
Q Consensus       115 ~QqeDl~~lG~LiLaLA~~~~~a~~~~n~~---~sl~~----------------------------------~~~~yS~d  157 (487)
                      ..+-|+-+||.+++.|.++..+-.......   ..+..                                  ....+|++
T Consensus       203 ~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  282 (331)
T 4aaa_A          203 GKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAGVRLPEIKEREPLERRYPKLSEV  282 (331)
T ss_dssp             CTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCGGGTTCCCCCCSSCCCHHHHSTTSCHH
T ss_pred             chHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhccccccccCccccccchhhhcccchhHH
Confidence            468899999999999999875421111111   11110                                  11257999


Q ss_pred             HHHHHHHHhccCC--cCCHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHH
Q psy1282         158 LRNLILYLLSVHQ--KRTVVDLMPMIGARYYTQLDAVQLHGDSLENELSK  205 (487)
Q Consensus       158 l~~~i~~Lls~~~--~k~i~~l~~~I~~r~~~~~d~~~~~~D~lE~eLs~  205 (487)
                      ++++|..++...+  +.++.+++.   ..+|+..+........++.++++
T Consensus       283 l~~li~~~L~~dP~~Rpt~~ell~---hp~f~~~~~~~~~~~~~~~~~~~  329 (331)
T 4aaa_A          283 VIDLAKKCLHIDPDKRPFCAELLH---HDFFQMDGFAERFSQELQLKVQK  329 (331)
T ss_dssp             HHHHHHHHTCSSGGGSCCGGGGGG---SHHHHGGGHHHHHHHHHHC----
T ss_pred             HHHHHHHHhccCcccCCCHHHHhc---CchhccCChhhhhhHHHhhcccc
Confidence            9999999998765  688887654   55666655555555555544444

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=87.94  E-value=1.8  Score=43.92  Aligned_cols=141  Identities=11%  Similarity=0.209  Sum_probs=77.4

Q ss_pred             hHHHHHHHHHHHHHHhcCCchhhhhccHHHHHHHHh-----------hhcCHHHHHHHHHHhccCC--cCCHHHHHHHHH
Q psy1282         116 LQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMA-----------RSYSADLRNLILYLLSVHQ--KRTVVDLMPMIG  182 (487)
Q Consensus       116 QqeDl~~lG~LiLaLA~~~~~a~~~~n~~~sl~~~~-----------~~yS~dl~~~i~~Lls~~~--~k~i~~l~~~I~  182 (487)
                      .+-|+-+||.++..|.|+..+-. ..+....+..+.           +.+|++++++|..++...+  +.++.+++..  
T Consensus       216 ~~~DiwslG~il~~ll~g~~pf~-~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h--  292 (494)
T 3lij_A          216 EKCDVWSIGVILFILLAGYPPFG-GQTDQEILRKVEKGKYTFDSPEWKNVSEGAKDLIKQMLQFDSQRRISAQQALEH--  292 (494)
T ss_dssp             THHHHHHHHHHHHHHHHSSCSSC-CSSHHHHHHHHHHTCCCCCSGGGTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTC--
T ss_pred             CchhHHHHHHHHHHHHhCCCCCC-CCCHHHHHHHHHhCCCCCCchhcccCCHHHHHHHHHHCCCChhhCccHHHHhcC--
Confidence            46799999999999999976521 223333333332           2579999999999998664  6888887542  


Q ss_pred             HHHHHHHHHHHhh-------hhhHHHHHHHHhhhchHHHHHHhhcccccCCCCCCCCCCCcccchhHHHhhhhhcccccC
Q psy1282         183 ARYYTQLDAVQLH-------GDSLENELSKEMENGRLFRLLVKLGTINERPELNLDPTWSETGDRYMLKLFRDYLLHQVQ  255 (487)
Q Consensus       183 ~r~~~~~d~~~~~-------~D~lE~eLs~ElENGRLfRLL~KL~fI~eRpE~~~D~~WSEtGdRYlLKLFRDYVFHQVD  255 (487)
                       .++..+......       ...++ .+ +...|.+-++-..........+        ++.-.+-+-+     +|...|
T Consensus       293 -p~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~l~qa~l~~ia~~~~--------~~~~~~~l~~-----~F~~~D  356 (494)
T 3lij_A          293 -PWIKEMCSKKESGIELPSLANAIE-NM-RKFQNSQKLAQAALLYMASKLT--------SQEETKELTD-----IFRHID  356 (494)
T ss_dssp             -HHHHHHHHHHHC---CCCCSSHHH-HH-HTTTTCCHHHHHHHHHHHHHSC--------CHHHHHHHHH-----HHHHHC
T ss_pred             -cccccCcccccccccccccHHHHH-HH-HHHHHhHHHHHHHHHHHHHhcc--------cHHHHHHHHH-----HHHHhC
Confidence             333332221110       01111 11 2222322222211111111110        1111223333     456668


Q ss_pred             CCCCcccChHHHHHHhhhcc
Q psy1282         256 EDGRPWLDMSHIVHCLNKLD  275 (487)
Q Consensus       256 e~G~PvlDL~HVl~cLNKLD  275 (487)
                      .+|.=.|+..-+..+|.++.
T Consensus       357 ~d~dG~I~~~El~~~l~~~~  376 (494)
T 3lij_A          357 KNGDGQLDRQELIDGYSKLS  376 (494)
T ss_dssp             TTCSSEECHHHHHHTTHHHH
T ss_pred             cCCCCeEcHHHHHHHHHHhc
Confidence            88888999888888888874

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=85.87  E-value=2.5  Score=39.03  Aligned_cols=66  Identities=15%  Similarity=0.277  Sum_probs=48.2

Q ss_pred             hHHHHHHHHHHHHHHhcCCchhhhhccHHHHHHHHh------------hhcCHHHHHHHHHHhccCC--cCCHHHHHHHH
Q psy1282         116 LQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMA------------RSYSADLRNLILYLLSVHQ--KRTVVDLMPMI  181 (487)
Q Consensus       116 QqeDl~~lG~LiLaLA~~~~~a~~~~n~~~sl~~~~------------~~yS~dl~~~i~~Lls~~~--~k~i~~l~~~I  181 (487)
                      .+-|+-+||.+++.|.++..+-....+.....+.+.            ..++++++++|..++...+  +.++.+++..+
T Consensus       204 ~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L  283 (289)
T 3og7_A          204 FQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEI  283 (289)
T ss_dssp             HHHHHHHHHHHHHHHHHSSCTTSSCCCHHHHHHHHHHTSCCCCTTSSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred             cccchHHHHHHHHHHHHCCCCccccchHHHHHHHhcccccCcchhhccccCCHHHHHHHHHHccCChhhCCCHHHHHHHH
Confidence            578999999999999998765322223333333332            2578999999999998764  68998887665

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=82.35  E-value=4.1  Score=37.10  Aligned_cols=66  Identities=11%  Similarity=0.177  Sum_probs=46.4

Q ss_pred             hHHHHHHHHHHHHHHhc-CCchhhhhccHHHHHHHHh--------hhcCHHHHHHHHHHhccCC--cCCHHHHHHHHH
Q psy1282         116 LQDDLTALGKLILAMTC-RSLMAVQRENLQTSIDLMA--------RSYSADLRNLILYLLSVHQ--KRTVVDLMPMIG  182 (487)
Q Consensus       116 QqeDl~~lG~LiLaLA~-~~~~a~~~~n~~~sl~~~~--------~~yS~dl~~~i~~Lls~~~--~k~i~~l~~~I~  182 (487)
                      .+-|+-+||.+++.|.+ +..+- ...+.....+.+.        ..++++++++|..++...+  +.++.+++..+.
T Consensus       191 ~~~Di~slG~il~~ll~~g~~p~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~  267 (288)
T 3kfa_A          191 IKSDVWAFGVLLWEIATYGMSPY-PGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE  267 (288)
T ss_dssp             HHHHHHHHHHHHHHHHTTSCCSS-TTCCGGGHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             chhhHHHHHHHHHHHHhCCCCCC-CCCCHHHHHHHHhccCCCCCCCCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHH
Confidence            67899999999999998 65432 1112222233332        2589999999999998764  689999876653

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=82.16  E-value=3.2  Score=38.09  Aligned_cols=65  Identities=15%  Similarity=0.211  Sum_probs=46.2

Q ss_pred             hhHHHHHHHHHHHHHHhcCCchhhhhccHHHHHHHHh---------hhcCHHHHHHHHHHhccCC--cCCHHHHHH
Q psy1282         115 DLQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMA---------RSYSADLRNLILYLLSVHQ--KRTVVDLMP  179 (487)
Q Consensus       115 ~QqeDl~~lG~LiLaLA~~~~~a~~~~n~~~sl~~~~---------~~yS~dl~~~i~~Lls~~~--~k~i~~l~~  179 (487)
                      ..+-|+-+||.+++.|.++..+-....+.......+.         ..++++++++|..++...+  +.++.+++.
T Consensus       207 ~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~  282 (290)
T 1t4h_A          207 DESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLN  282 (290)
T ss_dssp             CTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCCGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             CCcchHHHHHHHHHHHHhCCCCCCCcCcHHHHHHHHhccCCccccCCCCCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence            4678999999999999998755322233333333332         3477999999999998764  688888654

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=82.11  E-value=5.6  Score=35.66  Aligned_cols=67  Identities=9%  Similarity=0.145  Sum_probs=48.1

Q ss_pred             hhHHHHHHHHHHHHHHhc-CCchhhhhccHHHHHHHHh--------hhcCHHHHHHHHHHhccCC--cCCHHHHHHHHH
Q psy1282         115 DLQDDLTALGKLILAMTC-RSLMAVQRENLQTSIDLMA--------RSYSADLRNLILYLLSVHQ--KRTVVDLMPMIG  182 (487)
Q Consensus       115 ~QqeDl~~lG~LiLaLA~-~~~~a~~~~n~~~sl~~~~--------~~yS~dl~~~i~~Lls~~~--~k~i~~l~~~I~  182 (487)
                      +.+-|+-+||.++..|.+ +..+- ...+....++.+.        +.+|.++++++..++...+  +.++.+++..+.
T Consensus       183 ~~~~Di~slG~il~~l~~~g~~p~-~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~  260 (267)
T 3t9t_A          183 SSKSDVWSFGVLMWEVFSEGKIPY-ENRSNSEVVEDISTGFRLYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLA  260 (267)
T ss_dssp             CHHHHHHHHHHHHHHHHTTSCCTT-TTCCHHHHHHHHHTTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             cchhchhhhHHHHHHHhccCCCCC-CCCCHHHHHHHHhcCCcCCCCccCcHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence            368999999999999998 55442 2223333344443        2479999999999998764  689988776553

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=81.36  E-value=6.2  Score=35.89  Aligned_cols=66  Identities=14%  Similarity=0.096  Sum_probs=47.8

Q ss_pred             hhHHHHHHHHHHHHHHhc-CCchhhhhccHHHHHHHHh---------hhcCHHHHHHHHHHhccCC--cCCHHHHHHHH
Q psy1282         115 DLQDDLTALGKLILAMTC-RSLMAVQRENLQTSIDLMA---------RSYSADLRNLILYLLSVHQ--KRTVVDLMPMI  181 (487)
Q Consensus       115 ~QqeDl~~lG~LiLaLA~-~~~~a~~~~n~~~sl~~~~---------~~yS~dl~~~i~~Lls~~~--~k~i~~l~~~I  181 (487)
                      ..+-|+-+||.+++.|.+ +..+- ...+....+..+.         ..+|.+++++|..++...+  +.++.+++..+
T Consensus       202 ~~~~Di~slG~il~~l~~~g~~p~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l  279 (291)
T 1u46_A          202 SHASDTWMFGVTLWEMFTYGQEPW-IGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFL  279 (291)
T ss_dssp             EHHHHHHHHHHHHHHHHTTSCCTT-TTCCHHHHHHHHHTSCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred             CchhhHHHHHHHHHHHHhCCCCCc-ccCCHHHHHHHHHccCCCCCCCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHH
Confidence            378999999999999998 66542 1223333333332         2689999999999998764  68998877654

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=81.28  E-value=2.8  Score=37.94  Aligned_cols=64  Identities=16%  Similarity=0.211  Sum_probs=46.4

Q ss_pred             hhHHHHHHHHHHHHHHhcCCchhhhhccHHHHHHHHh-----hhcCHHHHHHHHHHhccCC--cCCHHHHHHHH
Q psy1282         115 DLQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMA-----RSYSADLRNLILYLLSVHQ--KRTVVDLMPMI  181 (487)
Q Consensus       115 ~QqeDl~~lG~LiLaLA~~~~~a~~~~n~~~sl~~~~-----~~yS~dl~~~i~~Lls~~~--~k~i~~l~~~I  181 (487)
                      +.+-|+-+||.+++.|.++..+....   ......+.     ..++.+++++|..++...+  +.++.+++..+
T Consensus       199 ~~~~Di~slG~il~~l~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l  269 (284)
T 2a19_B          199 GKEVDLYALGLILAELLHVCDTAFET---SKFFTDLRDGIISDIFDKKEKTLLQKLLSKKPEDRPNTSEILRTL  269 (284)
T ss_dssp             CTHHHHHHHHHHHHHHHSCCSSHHHH---HHHHHHHHTTCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred             cchhhhHHHHHHHHHHHhcCCcchhH---HHHHHHhhcccccccCCHHHHHHHHHHccCChhhCcCHHHHHHHH
Confidence            36789999999999999987543211   11222222     4689999999999998764  68998877655

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=80.80  E-value=1.5  Score=40.31  Aligned_cols=64  Identities=16%  Similarity=0.249  Sum_probs=45.1

Q ss_pred             hhHHHHHHHHHHHHHHhcCCchhhhhccHHHHHHHH----------hhhcCHHHHHHHHHHhccCC--cCCHHHHHH
Q psy1282         115 DLQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLM----------ARSYSADLRNLILYLLSVHQ--KRTVVDLMP  179 (487)
Q Consensus       115 ~QqeDl~~lG~LiLaLA~~~~~a~~~~n~~~sl~~~----------~~~yS~dl~~~i~~Lls~~~--~k~i~~l~~  179 (487)
                      +.+-|+-+||.+++.|+++..+-.. .+....+..+          ...+|.+++++|..++...+  +.++.+++.
T Consensus       200 ~~~~Di~slG~il~~l~~g~~p~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  275 (302)
T 2j7t_A          200 DYKADIWSLGITLIEMAQIEPPHHE-LNPMRVLLKIAKSDPPTLLTPSKWSVEFRDFLKIALDKNPETRPSAAQLLE  275 (302)
T ss_dssp             TTHHHHHHHHHHHHHHHHSSCTTTT-SCHHHHHHHHHHSCCCCCSSGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTT
T ss_pred             chhhhHHHHHHHHHHHhcCCCCCcc-CCHHHHHHHHhccCCcccCCccccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence            4688999999999999998765321 1222222211          13589999999999998764  688888754

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=80.53  E-value=7.1  Score=35.43  Aligned_cols=68  Identities=12%  Similarity=0.145  Sum_probs=48.4

Q ss_pred             hhHHHHHHHHHHHHHHhc-CCchhhhhccHHHHHHHHh--------hhcCHHHHHHHHHHhccCC--cCCHHHHHHHHHH
Q psy1282         115 DLQDDLTALGKLILAMTC-RSLMAVQRENLQTSIDLMA--------RSYSADLRNLILYLLSVHQ--KRTVVDLMPMIGA  183 (487)
Q Consensus       115 ~QqeDl~~lG~LiLaLA~-~~~~a~~~~n~~~sl~~~~--------~~yS~dl~~~i~~Lls~~~--~k~i~~l~~~I~~  183 (487)
                      +.+-|+-+||.+++.|.+ +..+- ...+....+..+.        ..++.+++++|..++...+  +.++.++...+..
T Consensus       188 ~~~~Di~slG~il~el~~~g~~p~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~  266 (279)
T 1qpc_A          188 TIKSDVWSFGILLTEIVTHGRIPY-PGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLED  266 (279)
T ss_dssp             CHHHHHHHHHHHHHHHHTTTCCSS-TTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             CchhhhHHHHHHHHHHHhCCCCCC-cccCHHHHHHHHhcccCCCCcccccHHHHHHHHHHhccChhhCCCHHHHHHHHHH
Confidence            367899999999999998 55432 1122333333333        3588999999999998764  6899988776643

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=80.47  E-value=5.9  Score=35.42  Aligned_cols=65  Identities=9%  Similarity=0.165  Sum_probs=46.0

Q ss_pred             hHHHHHHHHHHHHHHhcCCchhhhhccHHHH-HHHHh--------hhcCHHHHHHHHHHhccCC--cCCHHHHHHHH
Q psy1282         116 LQDDLTALGKLILAMTCRSLMAVQRENLQTS-IDLMA--------RSYSADLRNLILYLLSVHQ--KRTVVDLMPMI  181 (487)
Q Consensus       116 QqeDl~~lG~LiLaLA~~~~~a~~~~n~~~s-l~~~~--------~~yS~dl~~~i~~Lls~~~--~k~i~~l~~~I  181 (487)
                      .+-|+-+||.++..|.++..+-.. .+.... .....        ..+|++++++|..++...+  +.++.+++..+
T Consensus       190 ~~~Di~slG~il~el~~g~~p~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~L  265 (271)
T 3kmu_A          190 RSADMWSFAVLLWELVTREVPFAD-LSNMEIGMKVALEGLRPTIPPGISPHVSKLMKICMNEDPAKRPKFDMIVPIL  265 (271)
T ss_dssp             HHHHHHHHHHHHHHHHHCSCTTTT-SCHHHHHHHHHHSCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred             chhhHHHHHHHHHHHHhCCCCccc-cChHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHH
Confidence            478999999999999998765221 122221 22221        2589999999999998764  68888876655

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=80.44  E-value=3.5  Score=37.91  Aligned_cols=63  Identities=17%  Similarity=0.218  Sum_probs=45.0

Q ss_pred             hHHHHHHHHHHHHHHhcCCchhhhhccHHHHHHHHh-----------hhcCHHHHHHHHHHhccCC--cCCHHHHHH
Q psy1282         116 LQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMA-----------RSYSADLRNLILYLLSVHQ--KRTVVDLMP  179 (487)
Q Consensus       116 QqeDl~~lG~LiLaLA~~~~~a~~~~n~~~sl~~~~-----------~~yS~dl~~~i~~Lls~~~--~k~i~~l~~  179 (487)
                      .+-|+-+||.+++.|.++..+-. ..+....++.+.           ..+|.+++++|..++...+  +.++.+++.
T Consensus       201 ~~~Di~slG~~l~~l~~g~~p~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~  276 (287)
T 2wei_A          201 EKCDVWSAGVILYILLSGTPPFY-GKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLE  276 (287)
T ss_dssp             THHHHHHHHHHHHHHHHSSCSSC-CSSHHHHHHHHHHCCCCCCSGGGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CchhhHhHHHHHHHHHhCCCCCC-CCCHHHHHHHHHcCCCCCCchhhhhcCHHHHHHHHHHcccChhhCcCHHHHhc
Confidence            67899999999999999875421 122222233222           3579999999999998765  688887653

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=80.42  E-value=2.4  Score=38.52  Aligned_cols=63  Identities=14%  Similarity=0.098  Sum_probs=43.7

Q ss_pred             hHHHHHHHHHHHHHHhcCCchhhhhccHHHHHHHHh-----------hhcCHHHHHHHHHHhccCC--cCCHHHHHH
Q psy1282         116 LQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMA-----------RSYSADLRNLILYLLSVHQ--KRTVVDLMP  179 (487)
Q Consensus       116 QqeDl~~lG~LiLaLA~~~~~a~~~~n~~~sl~~~~-----------~~yS~dl~~~i~~Lls~~~--~k~i~~l~~  179 (487)
                      .+-|+-+||.+++.|.++..+-.. .+....+..+.           ..+|++++++|..++...+  +.+..+++.
T Consensus       186 ~~~Di~slG~~l~~l~~g~~p~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~  261 (277)
T 3f3z_A          186 PECDEWSAGVMMYVLLCGYPPFSA-PTDSEVMLKIREGTFTFPEKDWLNVSPQAESLIRRLLTKSPKQRITSLQALE  261 (277)
T ss_dssp             TTHHHHHHHHHHHHHHHSSCSSCC-SSHHHHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred             chhhehhHHHHHHHHHHCCCCCCC-CCHHHHHHHHHhCCCCCCchhhhcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            567999999999999998754211 12222222222           1589999999999998764  678877643

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=80.16  E-value=3.7  Score=39.89  Aligned_cols=64  Identities=14%  Similarity=0.190  Sum_probs=46.2

Q ss_pred             hHHHHHHHHHHHHHHhcCCchhhhhccHHHHHHHHh---------hhcCHHHHHHHHHHhccCC--cCCHHHHHH
Q psy1282         116 LQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMA---------RSYSADLRNLILYLLSVHQ--KRTVVDLMP  179 (487)
Q Consensus       116 QqeDl~~lG~LiLaLA~~~~~a~~~~n~~~sl~~~~---------~~yS~dl~~~i~~Lls~~~--~k~i~~l~~  179 (487)
                      .+-|+-+||.++..|+|+..|-....+.......+.         +.+|++++++|..++...+  +.++.+++.
T Consensus       208 ~~~DiwSlGvilyelltg~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~  282 (290)
T 3fpq_A          208 ESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLN  282 (290)
T ss_dssp             THHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCCGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             cHHHHHHHHHHHHHHHHCCCCCCCCCcHHHHHHHHHcCCCCCCCCccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            457999999999999999866322234444444333         2478999999999998765  688887653

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	487
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	88.24
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	87.61
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	85.62
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	84.73
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	84.44
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	82.41
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	82.08
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	81.46
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	80.8
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	80.4
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	80.11

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.24  E-value=0.11  Score=46.90  Aligned_cols=67  Identities=19%  Similarity=0.355  Sum_probs=46.5

Q ss_pred             hhhhHHHHHHHHHHHHHHhcCCchhhhhccHHHHHHHHhhhcCHHHHHHHHHHhccCC--cCCHHHHHH
Q psy1282         113 YHDLQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMARSYSADLRNLILYLLSVHQ--KRTVVDLMP  179 (487)
Q Consensus       113 yh~QqeDl~~lG~LiLaLA~~~~~a~~~~n~~~sl~~~~~~yS~dl~~~i~~Lls~~~--~k~i~~l~~  179 (487)
                      |....-|+-+||.++..|.++..+-...+++.++.-.+...+|++++++|..++...+  +.|+++++.
T Consensus       186 ~~~~~~DiwSlGvilyell~g~~Pf~~~~~i~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~  254 (273)
T d1xwsa_         186 YHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCLALRPSDRPTFEEIQN  254 (273)
T ss_dssp             BCHHHHHHHHHHHHHHHHHHSSCSCCSHHHHHHCCCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             CCCcccccccceeeehhHhhCCCCCCCchHHhhcccCCCCCCCHHHHHHHHHHccCCHhHCcCHHHHhc
Confidence            4457789999999999999998652211111111112235799999999999998764  688888643

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=87.61  E-value=0.66  Score=42.11  Aligned_cols=67  Identities=10%  Similarity=0.233  Sum_probs=49.3

Q ss_pred             hhHHHHHHHHHHHHHHhcCCchhhhhccHHHHHHHHhh--------hcCHHHHHHHHHHhccCC--cCCHHHHHHHH
Q psy1282         115 DLQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMAR--------SYSADLRNLILYLLSVHQ--KRTVVDLMPMI  181 (487)
Q Consensus       115 ~QqeDl~~lG~LiLaLA~~~~~a~~~~n~~~sl~~~~~--------~yS~dl~~~i~~Lls~~~--~k~i~~l~~~I  181 (487)
                      +++-|+-+||.++..|+++..+.....+..+..+.+.+        .+|++++++|.-++...+  +.++.++...+
T Consensus       194 ~~k~DiwS~Gv~l~ell~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ei~~~L  270 (287)
T d1opja_         194 SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAF  270 (287)
T ss_dssp             SHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred             CchhhhhhHHHHHHHHHhCCCCCCCcchHHHHHHHHhcCCCCCCCccchHHHHHHHHHHcCCCHhHCcCHHHHHHHH
Confidence            37889999999999999865443223345555555543        589999999999998765  68999875543

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.62  E-value=1.8  Score=38.85  Aligned_cols=76  Identities=8%  Similarity=0.133  Sum_probs=54.4

Q ss_pred             hhHHHHHHHHHHHHHHhc-CCchhhhhccHHHHHHHHhh--------hcCHHHHHHHHHHhccCC--cCCHHHHHHHHHH
Q psy1282         115 DLQDDLTALGKLILAMTC-RSLMAVQRENLQTSIDLMAR--------SYSADLRNLILYLLSVHQ--KRTVVDLMPMIGA  183 (487)
Q Consensus       115 ~QqeDl~~lG~LiLaLA~-~~~~a~~~~n~~~sl~~~~~--------~yS~dl~~~i~~Lls~~~--~k~i~~l~~~I~~  183 (487)
                      +.+-|+-+||.++..+.| +..+ ....+..+..+.+.+        .+|++++++|..++...+  ++++.++...+-+
T Consensus       188 ~~~sDiwS~Gv~l~ellt~g~~P-f~~~~~~~~~~~i~~~~~~~~p~~~~~~~~~li~~cl~~dp~~RPs~~~i~~~L~~  266 (277)
T d1xbba_         188 SSKSDVWSFGVLMWEAFSYGQKP-YRGMKGSEVTAMLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRN  266 (277)
T ss_dssp             EHHHHHHHHHHHHHHHHTTTCCS-STTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHH
T ss_pred             CchhhhccchhhhhHHhhCCCCC-CCCCCHHHHHHHHHcCCCCCCCcccCHHHHHHHHHHcCCCHhHCcCHHHHHHHhhC
Confidence            367899999999999765 5544 111233344444442        579999999999998664  6899998888877


Q ss_pred             HHHHHHHH
Q psy1282         184 RYYTQLDA  191 (487)
Q Consensus       184 r~~~~~d~  191 (487)
                      -+++.++.
T Consensus       267 ~~~~~~~e  274 (277)
T d1xbba_         267 YYYDVVNE  274 (277)
T ss_dssp             HHHHHHHH
T ss_pred             HHhhcCCC
Confidence            77766654

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.73  E-value=1.2  Score=40.05  Aligned_cols=66  Identities=6%  Similarity=0.147  Sum_probs=47.1

Q ss_pred             hHHHHHHHHHHHHHHhcCCchhhhhccHHHHHHHHhh--------hcCHHHHHHHHHHhccCC--cCCHHHHHHHH
Q psy1282         116 LQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMAR--------SYSADLRNLILYLLSVHQ--KRTVVDLMPMI  181 (487)
Q Consensus       116 QqeDl~~lG~LiLaLA~~~~~a~~~~n~~~sl~~~~~--------~yS~dl~~~i~~Lls~~~--~k~i~~l~~~I  181 (487)
                      .+-|+-+||-++..|.|+..+.....+..+.++.+..        ..+.+++++|...+...+  ++++.+++..+
T Consensus       192 ~~sDI~S~Gvil~el~t~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~eil~~L  267 (283)
T d1mqba_         192 SASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSIL  267 (283)
T ss_dssp             HHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHH
T ss_pred             CcccccccHHHHHHHHhCCCCccccCCHHHHHHHHhccCCCCCchhhHHHHHHHHHHHCcCCHhHCcCHHHHHHHH
Confidence            4679999999999999854332222334444555542        478999999999998764  68998876655

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.44  E-value=1  Score=40.64  Aligned_cols=64  Identities=14%  Similarity=0.190  Sum_probs=46.4

Q ss_pred             hHHHHHHHHHHHHHHhcCCchhhhhccHHHHHHHHh---------hhcCHHHHHHHHHHhccCC--cCCHHHHHH
Q psy1282         116 LQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMA---------RSYSADLRNLILYLLSVHQ--KRTVVDLMP  179 (487)
Q Consensus       116 QqeDl~~lG~LiLaLA~~~~~a~~~~n~~~sl~~~~---------~~yS~dl~~~i~~Lls~~~--~k~i~~l~~  179 (487)
                      .+-|+-+||.++..|+|+..|=....+.......+.         +.+|++++++|..++...+  +.+++|++.
T Consensus       191 ~~~DIwSlGvilyel~~g~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~ell~  265 (270)
T d1t4ha_         191 ESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLN  265 (270)
T ss_dssp             THHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCCGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             CcCchhhHHHHHHHHHHCCCCCCCcccHHHHHHHHHcCCCCcccCccCCHHHHHHHHHHccCCHhHCcCHHHHhC
Confidence            567999999999999999865322233333333332         3579999999999998765  688888754

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.41  E-value=1.8  Score=39.06  Aligned_cols=65  Identities=12%  Similarity=0.136  Sum_probs=48.6

Q ss_pred             hHHHHHHHHHHHHHHhc-CCchhhhhccHHHHHHHHhh--------hcCHHHHHHHHHHhccCC--cCCHHHHHHHH
Q psy1282         116 LQDDLTALGKLILAMTC-RSLMAVQRENLQTSIDLMAR--------SYSADLRNLILYLLSVHQ--KRTVVDLMPMI  181 (487)
Q Consensus       116 QqeDl~~lG~LiLaLA~-~~~~a~~~~n~~~sl~~~~~--------~yS~dl~~~i~~Lls~~~--~k~i~~l~~~I  181 (487)
                      .+-|+-+||-++..|.| +.++ ....+..+..+.+..        .+|++++++|...+...+  +.++.+++.++
T Consensus       216 ~k~DiwS~Gvvl~ell~~g~~p-~~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~dP~~Rps~~eil~~L  291 (299)
T d1fgka_         216 HQSDVWSFGVLLWEIFTLGGSP-YPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDL  291 (299)
T ss_dssp             HHHHHHHHHHHHHHHHTTSCCS-STTCCHHHHHHHHHTTCCCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred             chhhhHHhHHHHHHhccCCCCC-CCCCCHHHHHHHHHcCCCCCCCccchHHHHHHHHHHccCCHhHCcCHHHHHHHH
Confidence            56799999999999987 4543 222344555555543        589999999999998775  68999987766

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.08  E-value=1.9  Score=39.06  Aligned_cols=66  Identities=15%  Similarity=0.233  Sum_probs=48.8

Q ss_pred             hHHHHHHHHHHHHHHhcCCchhhhhccHHHHHHHHhh--------hcCHHHHHHHHHHhccCC--cCCHHHHHHHH
Q psy1282         116 LQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMAR--------SYSADLRNLILYLLSVHQ--KRTVVDLMPMI  181 (487)
Q Consensus       116 QqeDl~~lG~LiLaLA~~~~~a~~~~n~~~sl~~~~~--------~yS~dl~~~i~~Lls~~~--~k~i~~l~~~I  181 (487)
                      .+-|+-+||.++..|+|+..+.....+..+.++.+.+        ..|++++++|..++...+  +.++++++.++
T Consensus       193 ~ksDI~S~Giil~el~t~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L  268 (285)
T d1fmka3         193 IKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFL  268 (285)
T ss_dssp             HHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred             cHHhhhcchHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCCCCCcccCHHHHHHHHHHcccCHhHCcCHHHHHHHH
Confidence            6789999999999999864332223445556666552        578999999999998765  68898876554

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.46  E-value=1.5  Score=39.26  Aligned_cols=63  Identities=16%  Similarity=0.251  Sum_probs=45.4

Q ss_pred             hHHHHHHHHHHHHHHhcCCchhhhhccHHHHHHHHh--------hhcCHHHHHHHHHHhccCC--cCCHHHHHH
Q psy1282         116 LQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMA--------RSYSADLRNLILYLLSVHQ--KRTVVDLMP  179 (487)
Q Consensus       116 QqeDl~~lG~LiLaLA~~~~~a~~~~n~~~sl~~~~--------~~yS~dl~~~i~~Lls~~~--~k~i~~l~~  179 (487)
                      .+-|+-+||.++..|+|+..+- ...+..+.+..+.        ..||++++++|..++...+  +.++.+++.
T Consensus       193 ~~~DIwSlGvilyel~tg~~Pf-~~~~~~~~~~~i~~~~~~~~~~~~s~~l~~li~~~L~~dp~~Rps~~ell~  265 (269)
T d2java1         193 EKSDIWSLGCLLYELCALMPPF-TAFSQKELAGKIREGKFRRIPYRYSDELNEIITRMLNLKDYHRPSVEEILE  265 (269)
T ss_dssp             HHHHHHHHHHHHHHHHHSSCSC-CCSSHHHHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             hHHHHHhhCHHHHHHhhCCCCC-CCCCHHHHHHHHHcCCCCCCCcccCHHHHHHHHHHcCCChhHCcCHHHHHh
Confidence            5679999999999999997542 1123333333332        3699999999999998764  688888753

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=80.80  E-value=2.3  Score=38.21  Aligned_cols=67  Identities=13%  Similarity=0.154  Sum_probs=48.7

Q ss_pred             hhHHHHHHHHHHHHHHhcCCchhhhhccHHHHHHHHhh--------hcCHHHHHHHHHHhccCC--cCCHHHHHHHH
Q psy1282         115 DLQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMAR--------SYSADLRNLILYLLSVHQ--KRTVVDLMPMI  181 (487)
Q Consensus       115 ~QqeDl~~lG~LiLaLA~~~~~a~~~~n~~~sl~~~~~--------~yS~dl~~~i~~Lls~~~--~k~i~~l~~~I  181 (487)
                      +.+-|+-+||.++..|.|+..+.....+..+.+..+.+        .+++++++++..++...+  ++++.++.++|
T Consensus       220 t~ksDVwS~Gvvl~ell~~~~~p~~~~~~~e~~~~v~~~~~~~~p~~~~~~~~~li~~cl~~~P~~RPt~~ev~~~L  296 (301)
T d1lufa_         220 TTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVRDGNILACPENCPLELYNLMRLCWSKLPADRPSFCSIHRIL  296 (301)
T ss_dssp             CHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred             ChhhhhccchhhHHHHHccCCCCCCCCCHHHHHHHHHcCCCCCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHH
Confidence            36789999999999998885332222344444555442        589999999999998765  68998876554

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.40  E-value=2.2  Score=38.69  Aligned_cols=66  Identities=6%  Similarity=0.101  Sum_probs=49.3

Q ss_pred             hHHHHHHHHHHHHHHhcCCchhhhhccHHHHHHHHhh--------hcCHHHHHHHHHHhccCC--cCCHHHHHHHH
Q psy1282         116 LQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMAR--------SYSADLRNLILYLLSVHQ--KRTVVDLMPMI  181 (487)
Q Consensus       116 QqeDl~~lG~LiLaLA~~~~~a~~~~n~~~sl~~~~~--------~yS~dl~~~i~~Lls~~~--~k~i~~l~~~I  181 (487)
                      .+-|+-+||.++..|.++..+.....+..+.++.+.+        .+|++++++|..++...+  ++++.+++..+
T Consensus       205 ~~sDvwSfGvil~ell~~~~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~eil~~L  280 (309)
T d1fvra_         205 TNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSL  280 (309)
T ss_dssp             HHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHGGGTCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred             ccceeehhHHHHHHHHhcCCCCCCCCCHHHHHHHHHhcCCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHH
Confidence            5689999999999998865332333455555555543        589999999999998765  68999876553

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.11  E-value=3.6  Score=36.50  Aligned_cols=67  Identities=13%  Similarity=0.190  Sum_probs=47.8

Q ss_pred             hHHHHHHHHHHHHHHhcCCchhhhhccHHHHHHHHhh--------hcCHHHHHHHHHHhccCC--cCCHHHHHHHHH
Q psy1282         116 LQDDLTALGKLILAMTCRSLMAVQRENLQTSIDLMAR--------SYSADLRNLILYLLSVHQ--KRTVVDLMPMIG  182 (487)
Q Consensus       116 QqeDl~~lG~LiLaLA~~~~~a~~~~n~~~sl~~~~~--------~yS~dl~~~i~~Lls~~~--~k~i~~l~~~I~  182 (487)
                      .+-|+-+||.++..|.|+..+.....+....+..+.+        .+|+++++++..++...+  +.+++++..++-
T Consensus       189 ~~sDvwS~Gvvl~ellt~~~~~~~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~~P~~Rpt~~ei~~~L~  265 (272)
T d1qpca_         189 IKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE  265 (272)
T ss_dssp             HHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             chhhhhhhHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCCCCcccChHHHHHHHHHHcCCCHhHCcCHHHHHHHhh
Confidence            5679999999999999864322222334444444442        589999999999998765  689998876553