Psyllid ID: psy13520

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------24
Protein Sequence
MANIRRLSDFTARSSFSSATMPQPTQPINLVMCESLSVPCAPVDIEEPALSKRRTDSYSTQPINLIMCESLSVPCAPVDIEEPALSKRRTDSYSEINGGESPGVAADWVPSLWSIMNKVKLEAMMWGAGTALGELPPYFLSRAARLSLLDPDDVDDLTLVDKLKLKIETLVNKVGFFGILACASIPNPLFDLAGITCGHFLIPFWTFFGATLIGKAVIKMSIQGNKWVPGTRGYVTIS
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccEEEEEccccccccccccccccccccccccccccccHHcccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHcccccccccccEEEcc
Secondary Structure Prediction (SSPRO)
ccccHEcccccccccccccccccccccEEEEEEEcccccccccccccccHccccccccccccEEEEEcccccccccccccHccccccHcccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHccccccHHHHHcHHHHHHHHHHHHHHHHccEEEEEEccccccHHHHHHHHccccHHHHHHHHHHHHHHHHEEEEEEEcccccccccEEEEEc
Coil and Loop (DISEMBL)
manirrlsdftarssfssatmpqptqpinlvmceslsvpcapvdieepalskrrtdsystqpinlimceslsvpcapvdieepalskrrtdsyseinggespgvaadwVPSLWSIMNKVKLEAMMWgagtalgelppyfLSRAArlslldpddvddltlVDKLKLKIETLVNKVGFFGILAcasipnplfdlagitcghflipfwtffgaTLIGKAVIKMSIqgnkwvpgtrgyvtis
Flexible Loop (DISEMBL)
manirrlsdftarssfssatmpqptQPINLVMCESLSVPCAPVDIeepalskrrtdsystqPINLIMCESLSVPCAPVDIEEPALSKRRTDSyseinggespgvaadwvpSLWSIMNKVKLEAMMWGAGTALGELPPYFLSRAARLSLLDPDDVDDLTLVDKLKLKIETLVNKVGFFGILACASIPNPLFDLAGITCGHFLIPFWTFFGATLIGKAVIKMsiqgnkwvpgtrgyvtis
Low Complexity Region (SEG)
MANIRRLSDFTARSSFSSATMPQPTQPINLVMCESLSVPCAPVDIEEPALSKRRTDSYSTQPINLIMCESLSVPCAPVDIEEPALSKRRTDSYSEINGGESPGVAADWVPSLWSIMNKVKLEAMMWGAGTALGELPPYFLSRAARLSlldpddvddltlvdklklkIETLVNKVGFFGILACASIPNPLFDLAGITCGHFLIPFWTFFGATLIGKAVIKMSIQGNKWVPGTRGYVTIS
Disordered region (IsUnstruct)
***************************INLVMCESLSVPCAPVDI**************TQPINLIMCESLSVPCAPVDI**********************GVAADWVPSLWSIMNKVKLEAMMWGAGTALGELPPYFLSRAARLSLLDPDDVDDLTLVDKLKLKIETLVNKVGFFGILACASIPNPLFDLAGITCGHFLIPFWTFFGATLIGKAVIKMSIQGNKWVPGTRGYVT**
Disordered Region (DISOPRED)
*****R**DFTA***********PTQPINLVMCESLSVPCAPVDIEEPAL****TDSYSTQPINLIMCESLSVPCAPVDIEEPALSKRRTDSYSEINGGESPGVAADWVPSLWSIMNKVKLEAMMWGAGTALGELPPYFLSR*****************VDKLKLKIETLVNKVGFFGILACASIPNPLFDLAGITCGHFLIPFWTFFGATLIGKAVIKMSIQGNKWVPGTRGYVTI*
Disordered Region (DISEMBL)
********DFTARSSFSSATMPQPTQPINLVMCESLSVPCAPVDIEEPALSKRRTDSYSTQPINLIMCESLSVPCAPVDIEEPALSKRRTDSYSEINGGESPGVAADWVPSLWSIMNKVKLEAMMWGAGTALGELPPYFLSRAARLSLLDPDDVDDLTLVDKLKLKIETLVNKVGFFGILACASIPNPLFDLAGITCGHFLIPFWTFFGATLIGKAVIKMSIQGNKWVPGTRGYVTIS
Disordered Region (DISPRO)
*****************S*TMPQPTQPINLVMCESLSVPCAPVDIEEPALSKRRTDSYSTQPINLIMCESLSVPCAPVDIEEPALSKRRTDSYSEINGGESPGVAADWVPSLWSIMNKVKLEAMMWGAGTALGELPPYFLSRAARLSLLDPDDVDDLTLVDKLKLKIETLVNKVGFFGILACASIPNPLFDLAGITCGHFLIPFWTFFGATLIGKAVIKMSIQGNKWVPGTRGYVTIS
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MANIRRLSDFTARSSFSSATMPQPTQPINLVMCESLSVPCAPVDIEEPALSKRRTDSYSTQPINLIMCESLSVPCAPVDIEEPALSKRRTDSYSEINGGESPGVAADWVPSLWSIMNKVKLEAMMWGAGTALGELPPYFLSRAARLSLLDPDDVDDLTLVDKLKLKIETLVNKVGFFGILACASIPNPLFDLAGITCGHFLIPFWTFFGATLIGKAVIKMSIQGNKWVPGTRGYVTIS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	238	2.2.26 [Sep-21-2011]
Q99KU0	406	Vacuole membrane protein	yes	N/A	0.5	0.293	0.643	5e-44
Q91ZQ0	406	Vacuole membrane protein	yes	N/A	0.474	0.278	0.666	6e-44
Q0VCK9	406	Vacuole membrane protein	yes	N/A	0.474	0.278	0.666	7e-44
Q96GC9	406	Vacuole membrane protein	yes	N/A	0.474	0.278	0.666	1e-43
Q5R9K4	406	Vacuole membrane protein	yes	N/A	0.474	0.278	0.666	1e-43
Q68EQ9	406	Vacuole membrane protein	yes	N/A	0.474	0.278	0.658	6e-43
Q6INE8	406	Vacuole membrane protein	N/A	N/A	0.474	0.278	0.658	9e-43
Q6NYY9	406	Vacuole membrane protein	yes	N/A	0.466	0.273	0.648	4e-42
Q9XWU8	458	Ectopic P granules protei	yes	N/A	0.521	0.270	0.507	4e-37
Q54NL4	403	Vacuole membrane protein	yes	N/A	0.478	0.282	0.553	5e-35

>sp|Q99KU0|VMP1_MOUSE Vacuole membrane protein 1 OS=Mus musculus GN=Vmp1 PE=2 SV=2

 Score =  177 bits (450), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 85/132 (64%), Positives = 100/132 (75%), Gaps = 13/132 (9%)

Query: 105 AADWVPSLWSIMNKVKLEAMMWGAGTALGELPPYFLSRAARLSLLDPDDVDDLTLVDKL- 163
            A+   SLWSI++KV++EA MWG GTA+GELPPYF++RAARLS  +PDD +     + L 
Sbjct: 173 GAEGAISLWSIISKVRIEACMWGIGTAIGELPPYFMARAARLSGAEPDDEEYQEFEEMLE 232

Query: 164 ------------KLKIETLVNKVGFFGILACASIPNPLFDLAGITCGHFLIPFWTFFGAT 211
                       KL ++ LV KVGFFGILACASIPNPLFDLAGITCGHFL+PFWTFFGAT
Sbjct: 233 HAEAAQDFASRAKLAVQKLVQKVGFFGILACASIPNPLFDLAGITCGHFLVPFWTFFGAT 292

Query: 212 LIGKAVIKMSIQ 223
           LIGKA+IKM IQ
Sbjct: 293 LIGKAIIKMHIQ 304

Stress-induced protein that, when overexpressed, promotes formation of intracellular vacuoles followed by cell death. May be involved in the cytoplasmic vacuolization of acinar cells during the early stage of acute pancreatitis. Involved in cell-cell adhesion. Plays an essential role in formation of cell junctions (By similarity). Plays a role in the initial stages of the autophagic process through its interaction with BECN1.
Mus musculus (taxid: 10090)

>sp|Q91ZQ0|VMP1_RAT Vacuole membrane protein 1 OS=Rattus norvegicus GN=Vmp1 PE=1 SV=1

 Score =  177 bits (449), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 84/126 (66%), Positives = 98/126 (77%), Gaps = 13/126 (10%)

Query: 111 SLWSIMNKVKLEAMMWGAGTALGELPPYFLSRAARLSLLDPDDVDDLTLVDKL------- 163
           SLWSI++KV++EA MWG GTA+GELPPYF++RAARLS  +PDD +     + L       
Sbjct: 179 SLWSIISKVRIEACMWGIGTAIGELPPYFMARAARLSGAEPDDEEYQEFEEMLEHAETAQ 238

Query: 164 ------KLKIETLVNKVGFFGILACASIPNPLFDLAGITCGHFLIPFWTFFGATLIGKAV 217
                 KL ++ LV KVGFFGILACASIPNPLFDLAGITCGHFL+PFWTFFGATLIGKA+
Sbjct: 239 DFASRAKLAVQKLVQKVGFFGILACASIPNPLFDLAGITCGHFLVPFWTFFGATLIGKAI 298

Query: 218 IKMSIQ 223
           IKM IQ
Sbjct: 299 IKMHIQ 304

Stress-induced protein that, when overexpressed, promotes formation of intracellular vacuoles followed by cell death. May be involved in the cytoplasmic vacuolization of acinar cells during the early stage of acute pancreatitis. Involved in cell-cell adhesion (By similarity). Plays an essential role in formation of cell junctions (By similarity). Plays a role in the initial stages of the autophagic process through its interaction with BECN1.

Rattus norvegicus (taxid: 10116)

>sp|Q0VCK9|VMP1_BOVIN Vacuole membrane protein 1 OS=Bos taurus GN=VMP1 PE=2 SV=1

 Score =  177 bits (448), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 84/126 (66%), Positives = 98/126 (77%), Gaps = 13/126 (10%)

Query: 111 SLWSIMNKVKLEAMMWGAGTALGELPPYFLSRAARLSLLDPDDVDDLTLVDKL------- 163
           SLWSI++KV++EA MWG GTA+GELPPYF++RAARLS  +PDD +     + L       
Sbjct: 179 SLWSIISKVRIEACMWGIGTAIGELPPYFMARAARLSGAEPDDEEYQEFEEMLEHAETAQ 238

Query: 164 ------KLKIETLVNKVGFFGILACASIPNPLFDLAGITCGHFLIPFWTFFGATLIGKAV 217
                 KL ++ LV KVGFFGILACASIPNPLFDLAGITCGHFL+PFWTFFGATLIGKA+
Sbjct: 239 DFASRAKLAVQNLVQKVGFFGILACASIPNPLFDLAGITCGHFLVPFWTFFGATLIGKAI 298

Query: 218 IKMSIQ 223
           IKM IQ
Sbjct: 299 IKMHIQ 304

Stress-induced protein that, when overexpressed, promotes formation of intracellular vacuoles followed by cell death. May be involved in the cytoplasmic vacuolization of acinar cells during the early stage of acute pancreatitis. Involved in cell-cell adhesion. Plays an essential role in formation of cell junctions. Plays a role in the initial stages of the autophagic process through its interaction with BECN1.

Bos taurus (taxid: 9913)

>sp|Q96GC9|VMP1_HUMAN Vacuole membrane protein 1 OS=Homo sapiens GN=VMP1 PE=1 SV=1

 Score =  176 bits (447), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 84/126 (66%), Positives = 98/126 (77%), Gaps = 13/126 (10%)

Query: 111 SLWSIMNKVKLEAMMWGAGTALGELPPYFLSRAARLSLLDPDDVDDLTLVDKL------- 163
           SLWSI++KV++EA MWG GTA+GELPPYF++RAARLS  +PDD +     + L       
Sbjct: 179 SLWSIISKVRIEACMWGIGTAIGELPPYFMARAARLSGAEPDDEEYQEFEEMLEHAESAQ 238

Query: 164 ------KLKIETLVNKVGFFGILACASIPNPLFDLAGITCGHFLIPFWTFFGATLIGKAV 217
                 KL ++ LV KVGFFGILACASIPNPLFDLAGITCGHFL+PFWTFFGATLIGKA+
Sbjct: 239 DFASRAKLAVQKLVQKVGFFGILACASIPNPLFDLAGITCGHFLVPFWTFFGATLIGKAI 298

Query: 218 IKMSIQ 223
           IKM IQ
Sbjct: 299 IKMHIQ 304

Stress-induced protein that, when overexpressed, promotes formation of intracellular vacuoles followed by cell death. May be involved in the cytoplasmic vacuolization of acinar cells during the early stage of acute pancreatitis. Plays a role in the initial stages of the autophagic process through its interaction with BECN1 (By similarity). Involved in cell-cell adhesion. Plays an essential role in formation of cell junctions.

Homo sapiens (taxid: 9606)

>sp|Q5R9K4|VMP1_PONAB Vacuole membrane protein 1 OS=Pongo abelii GN=VMP1 PE=2 SV=1

 Score =  176 bits (446), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 84/126 (66%), Positives = 98/126 (77%), Gaps = 13/126 (10%)

Query: 111 SLWSIMNKVKLEAMMWGAGTALGELPPYFLSRAARLSLLDPDDVDDLTLVDKL------- 163
           SLWSI++KV++EA MWG GTA+GELPPYF++RAARLS  +PDD +     + L       
Sbjct: 179 SLWSIISKVRIEACMWGIGTAIGELPPYFMARAARLSGAEPDDEEYQEFEEMLEHAESAQ 238

Query: 164 ------KLKIETLVNKVGFFGILACASIPNPLFDLAGITCGHFLIPFWTFFGATLIGKAV 217
                 KL ++ LV KVGFFGILACASIPNPLFDLAGITCGHFL+PFWTFFGATLIGKA+
Sbjct: 239 DFASRAKLAVQKLVQKVGFFGILACASIPNPLFDLAGITCGHFLVPFWTFFGATLIGKAI 298

Query: 218 IKMSIQ 223
           IKM IQ
Sbjct: 299 IKMHIQ 304

Stress-induced protein that, when overexpressed, promotes formation of intracellular vacuoles followed by cell death. May be involved in the cytoplasmic vacuolization of acinar cells during the early stage of acute pancreatitis. Involved in cell-cell adhesion. Plays an essential role in formation of cell junctions. Plays a role in the initial stages of the autophagic process through its interaction with BECN1.

Pongo abelii (taxid: 9601)

>sp|Q68EQ9|VMP1_XENTR Vacuole membrane protein 1 OS=Xenopus tropicalis GN=vmp1 PE=2 SV=1

 Score =  174 bits (440), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 83/126 (65%), Positives = 98/126 (77%), Gaps = 13/126 (10%)

Query: 111 SLWSIMNKVKLEAMMWGAGTALGELPPYFLSRAARLSLLDPDDVDDLTLVDKL------- 163
           SLW+I++KV+LEA MWGAGTA+GELPPYF++RAARLS ++ DD +     + L       
Sbjct: 179 SLWTIISKVRLEACMWGAGTAIGELPPYFMARAARLSGVETDDEEYAEFEEMLEHAQTAQ 238

Query: 164 ------KLKIETLVNKVGFFGILACASIPNPLFDLAGITCGHFLIPFWTFFGATLIGKAV 217
                 KL ++ LV KVGF GILACASIPNPLFDLAGITCGHFL+PFWTFFGATLIGKA+
Sbjct: 239 DFATRAKLAVQNLVQKVGFLGILACASIPNPLFDLAGITCGHFLVPFWTFFGATLIGKAI 298

Query: 218 IKMSIQ 223
           IKM IQ
Sbjct: 299 IKMHIQ 304

Xenopus tropicalis (taxid: 8364)

>sp|Q6INE8|VMP1_XENLA Vacuole membrane protein 1 OS=Xenopus laevis GN=vmp1 PE=2 SV=1

 Score =  173 bits (439), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 83/126 (65%), Positives = 98/126 (77%), Gaps = 13/126 (10%)

Query: 111 SLWSIMNKVKLEAMMWGAGTALGELPPYFLSRAARLSLLDPDDVDDLTLVDKL------- 163
           SLW+I++KV+LEA MWGAGTA+GELPPYF++RAARLS ++ DD +     + L       
Sbjct: 179 SLWTIISKVRLEACMWGAGTAIGELPPYFMARAARLSGVETDDEEYAEFEEMLEHAQTAQ 238

Query: 164 ------KLKIETLVNKVGFFGILACASIPNPLFDLAGITCGHFLIPFWTFFGATLIGKAV 217
                 KL ++ LV KVGF GILACASIPNPLFDLAGITCGHFL+PFWTFFGATLIGKA+
Sbjct: 239 DFATRAKLTVQNLVQKVGFLGILACASIPNPLFDLAGITCGHFLVPFWTFFGATLIGKAI 298

Query: 218 IKMSIQ 223
           IKM IQ
Sbjct: 299 IKMHIQ 304

Xenopus laevis (taxid: 8355)

>sp|Q6NYY9|VMP1_DANRE Vacuole membrane protein 1 OS=Danio rerio GN=vmp1 PE=2 SV=1

 Score =  171 bits (433), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 83/128 (64%), Positives = 95/128 (74%), Gaps = 17/128 (13%)

Query: 111 SLWSIMNKVKLEAMMWGAGTALGELPPYFLSRAARLS---------------LLDPDDVD 155
           SLW+IM+KV+LEA MWGAGTA+GELPPYF++RAAR+S               L       
Sbjct: 179 SLWTIMSKVRLEACMWGAGTAIGELPPYFMARAARMSGADPDDEDYEEFEEMLEHSQSAQ 238

Query: 156 DLTLVDKLKLKIETLVNKVGFFGILACASIPNPLFDLAGITCGHFLIPFWTFFGATLIGK 215
           D     + KL ++ +V KVGFFGILACASIPNPLFDLAGITCGHFLIPFWTFFGATLIGK
Sbjct: 239 DFA--SRAKLAVQNMVQKVGFFGILACASIPNPLFDLAGITCGHFLIPFWTFFGATLIGK 296

Query: 216 AVIKMSIQ 223
           A+IKM IQ
Sbjct: 297 AIIKMHIQ 304

Danio rerio (taxid: 7955)

>sp|Q9XWU8|VMP1_CAEEL Ectopic P granules protein 3 OS=Caenorhabditis elegans GN=epg-3 PE=2 SV=2

 Score =  154 bits (390), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 72/142 (50%), Positives = 100/142 (70%), Gaps = 18/142 (12%)

Query: 100 ESPGVAADWVPSLWSIMNKVKLEAMMWGAGTALGELPPYFLSRAARLSLLDPDDVD---- 155
           + P   +    + W I+ KV++E+++WGAGTALGELPPYF++RAAR+S  +PDD +    
Sbjct: 178 QCPSTKSSIAVTFWQIVAKVRVESLLWGAGTALGELPPYFMARAARISGQEPDDEEYREF 237

Query: 156 --------------DLTLVDKLKLKIETLVNKVGFFGILACASIPNPLFDLAGITCGHFL 201
                          L++V++ K  +E  ++++GF GIL  ASIPNPLFDLAGITCGHFL
Sbjct: 238 LELMNADKESDADQKLSIVERAKSWVEHNIHRLGFPGILLFASIPNPLFDLAGITCGHFL 297

Query: 202 IPFWTFFGATLIGKAVIKMSIQ 223
           +PFW+FFGATLIGKA++KM +Q
Sbjct: 298 VPFWSFFGATLIGKALVKMHVQ 319

Involved in autophagy. Thought to act in autophagasome and omegasome formation.

Caenorhabditis elegans (taxid: 6239)

>sp|Q54NL4|VMP1_DICDI Vacuole membrane protein 1 homolog OS=Dictyostelium discoideum GN=vmp1 PE=3 SV=1

 Score =  147 bits (372), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 72/130 (55%), Positives = 86/130 (66%), Gaps = 16/130 (12%)

Query: 111 SLWSIMNKVKLEAMMWGAGTALGELPPYFLSRAARLSLL----------------DPDDV 154
           S W I+ KV+  A+ WGAGTA+GELPPYF++R ARL  L                D  D 
Sbjct: 165 SFWMILQKVQWAALFWGAGTAIGELPPYFVARTARLKGLKLEQEKKLKEQQEKPIDEKDQ 224

Query: 155 DDLTLVDKLKLKIETLVNKVGFFGILACASIPNPLFDLAGITCGHFLIPFWTFFGATLIG 214
               L+++L  K+  L+  +GFFGILA ASIPNPLFDLAGITCGHFL+PFW FFGAT IG
Sbjct: 225 PKKGLLERLSEKVPALIGNLGFFGILAFASIPNPLFDLAGITCGHFLVPFWKFFGATFIG 284

Query: 215 KAVIKMSIQG 224
           KAV+K  IQ 
Sbjct: 285 KAVVKAHIQA 294

Required for organelle biogenesis, protein secretion, and development. Required for maintaining integrity of the endoplasmic reticulum. May play a role in autophagy.

Dictyostelium discoideum (taxid: 44689)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	238
194890005	539	GG18903 [Drosophila erecta] gi|190648860	0.483	0.213	0.676	5e-46
194764214	527	GF20825 [Drosophila ananassae] gi|190619	0.483	0.218	0.692	6e-46
198471231	541	GA17061 [Drosophila pseudoobscura pseudo	0.483	0.212	0.676	7e-46
195481976	541	GE15374 [Drosophila yakuba] gi|194189381	0.483	0.212	0.676	7e-46
195425849	546	GK10339 [Drosophila willistoni] gi|19415	0.483	0.210	0.669	1e-45
195402045	503	GJ14869 [Drosophila virilis] gi|19414732	0.483	0.228	0.676	1e-45
193695384	419	PREDICTED: transmembrane protein 49-like	0.504	0.286	0.708	1e-45
24641079	530	transport and golgi organization 5, isof	0.483	0.216	0.669	1e-45
195350738	516	GM11289 [Drosophila sechellia] gi|194123	0.483	0.222	0.669	1e-45
242013395	410	vacuole membrane protein, putative [Pedi	0.487	0.282	0.674	1e-45

>gi|194890005|ref|XP_001977211.1| GG18903 [Drosophila erecta] gi|190648860|gb|EDV46138.1| GG18903 [Drosophila erecta]

 Score =  190 bits (482), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 88/130 (67%), Positives = 106/130 (81%), Gaps = 15/130 (11%)

Query: 109 VPSLWSIMNKVKLEAMMWGAGTALGELPPYFLSRAARLSLLDPDDVDDL----------- 157
           VP++WSIM+KV++EA +WGAGTALGELPPYF+++AARLS  DP+D ++L           
Sbjct: 281 VPNIWSIMSKVRMEAFLWGAGTALGELPPYFMAKAARLSGYDPEDAEELAEFEALNAKRH 340

Query: 158 ----TLVDKLKLKIETLVNKVGFFGILACASIPNPLFDLAGITCGHFLIPFWTFFGATLI 213
               +L+DK KL +E +V +VGFFGILACASIPNPLFDLAGITCGHFL+PFWTFFGATLI
Sbjct: 341 QKNLSLMDKGKLFMERVVERVGFFGILACASIPNPLFDLAGITCGHFLVPFWTFFGATLI 400

Query: 214 GKAVIKMSIQ 223
           GKAVIKM IQ
Sbjct: 401 GKAVIKMHIQ 410

Source: Drosophila erecta

Species: Drosophila erecta

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|194764214|ref|XP_001964225.1| GF20825 [Drosophila ananassae] gi|190619150|gb|EDV34674.1| GF20825 [Drosophila ananassae]

 Score =  189 bits (481), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 90/130 (69%), Positives = 106/130 (81%), Gaps = 15/130 (11%)

Query: 109 VPSLWSIMNKVKLEAMMWGAGTALGELPPYFLSRAARLSLLDPDDVDDL----------- 157
           VP++WSIM+KV+LEA +WGAGTALGELPPYF+++AARLS  DPDD ++L           
Sbjct: 260 VPNIWSIMSKVRLEAFLWGAGTALGELPPYFMAKAARLSGYDPDDAEELAEFEALNAKRH 319

Query: 158 ----TLVDKLKLKIETLVNKVGFFGILACASIPNPLFDLAGITCGHFLIPFWTFFGATLI 213
               +L+DK KL +E +V +VGFFGILACASIPNPLFDLAGITCGHFL+PFWTFFGATLI
Sbjct: 320 QKNLSLMDKGKLFMERVVERVGFFGILACASIPNPLFDLAGITCGHFLVPFWTFFGATLI 379

Query: 214 GKAVIKMSIQ 223
           GKAVIKM IQ
Sbjct: 380 GKAVIKMHIQ 389

Source: Drosophila ananassae

Species: Drosophila ananassae

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|198471231|ref|XP_001355546.2| GA17061 [Drosophila pseudoobscura pseudoobscura] gi|198145826|gb|EAL32605.2| GA17061 [Drosophila pseudoobscura pseudoobscura]

 Score =  189 bits (481), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 88/130 (67%), Positives = 106/130 (81%), Gaps = 15/130 (11%)

Query: 109 VPSLWSIMNKVKLEAMMWGAGTALGELPPYFLSRAARLSLLDPDDVDDL----------- 157
           VP+LW+IM+KV+LEA +WGAGTALGELPPYF+++AARLS  DPDD ++L           
Sbjct: 266 VPNLWAIMSKVRLEAFLWGAGTALGELPPYFMAKAARLSGYDPDDAEELAEFEALNAKRN 325

Query: 158 ----TLVDKLKLKIETLVNKVGFFGILACASIPNPLFDLAGITCGHFLIPFWTFFGATLI 213
               +L+DK KL +E +V ++GFFGILACASIPNPLFDLAGITCGHFL+PFWTFFGATLI
Sbjct: 326 QKNLSLMDKGKLFMERVVERIGFFGILACASIPNPLFDLAGITCGHFLVPFWTFFGATLI 385

Query: 214 GKAVIKMSIQ 223
           GKA+IKM IQ
Sbjct: 386 GKAIIKMHIQ 395

Source: Drosophila pseudoobscura pseudoobscura

Species: Drosophila pseudoobscura

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195481976|ref|XP_002101857.1| GE15374 [Drosophila yakuba] gi|194189381|gb|EDX02965.1| GE15374 [Drosophila yakuba]

 Score =  189 bits (480), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 88/130 (67%), Positives = 106/130 (81%), Gaps = 15/130 (11%)

Query: 109 VPSLWSIMNKVKLEAMMWGAGTALGELPPYFLSRAARLSLLDPDDVDDL----------- 157
           VP++WSIM+KV++EA +WGAGTALGELPPYF+++AARLS  DP+D ++L           
Sbjct: 281 VPNIWSIMSKVRMEAFLWGAGTALGELPPYFMAKAARLSGYDPEDAEELAEFEALNAKRH 340

Query: 158 ----TLVDKLKLKIETLVNKVGFFGILACASIPNPLFDLAGITCGHFLIPFWTFFGATLI 213
               +L+DK KL +E +V +VGFFGILACASIPNPLFDLAGITCGHFL+PFWTFFGATLI
Sbjct: 341 QKNLSLMDKGKLFMERVVERVGFFGILACASIPNPLFDLAGITCGHFLVPFWTFFGATLI 400

Query: 214 GKAVIKMSIQ 223
           GKAVIKM IQ
Sbjct: 401 GKAVIKMHIQ 410

Source: Drosophila yakuba

Species: Drosophila yakuba

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195425849|ref|XP_002061176.1| GK10339 [Drosophila willistoni] gi|194157261|gb|EDW72162.1| GK10339 [Drosophila willistoni]

 Score =  189 bits (479), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 87/130 (66%), Positives = 106/130 (81%), Gaps = 15/130 (11%)

Query: 109 VPSLWSIMNKVKLEAMMWGAGTALGELPPYFLSRAARLSLLDPDDVDDL----------- 157
           +P++WSIM+KV++EA +WGAGTALGELPPYF+++AARLS  DPDD ++L           
Sbjct: 269 MPNIWSIMSKVRMEAFLWGAGTALGELPPYFMAKAARLSGYDPDDAEELAEFEALNAKRN 328

Query: 158 ----TLVDKLKLKIETLVNKVGFFGILACASIPNPLFDLAGITCGHFLIPFWTFFGATLI 213
               +L+DK KL +E +V +VGFFGILACASIPNPLFDLAGITCGHFL+PFWTFFGATLI
Sbjct: 329 QKNLSLMDKGKLFMERVVERVGFFGILACASIPNPLFDLAGITCGHFLVPFWTFFGATLI 388

Query: 214 GKAVIKMSIQ 223
           GKA+IKM IQ
Sbjct: 389 GKAIIKMHIQ 398

Source: Drosophila willistoni

Species: Drosophila willistoni

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195402045|ref|XP_002059620.1| GJ14869 [Drosophila virilis] gi|194147327|gb|EDW63042.1| GJ14869 [Drosophila virilis]

 Score =  189 bits (479), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 88/130 (67%), Positives = 106/130 (81%), Gaps = 15/130 (11%)

Query: 109 VPSLWSIMNKVKLEAMMWGAGTALGELPPYFLSRAARLSLLDPDDVDDL----------- 157
           +P++WSIM+KV+LEA +WGAGTALGELPPYF+++AARLS  DPDD ++L           
Sbjct: 249 MPNIWSIMSKVRLEAFLWGAGTALGELPPYFMAKAARLSGYDPDDAEELADFEALNAKRH 308

Query: 158 ----TLVDKLKLKIETLVNKVGFFGILACASIPNPLFDLAGITCGHFLIPFWTFFGATLI 213
               +L+DK KL +E +V +VGFFGILACASIPNPLFDLAGITCGHFL+PFWTFFGATLI
Sbjct: 309 QKNLSLMDKGKLFMERVVERVGFFGILACASIPNPLFDLAGITCGHFLVPFWTFFGATLI 368

Query: 214 GKAVIKMSIQ 223
           GKA+IKM IQ
Sbjct: 369 GKAIIKMHIQ 378

Source: Drosophila virilis

Species: Drosophila virilis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|193695384|ref|XP_001951201.1| PREDICTED: transmembrane protein 49-like [Acyrthosiphon pisum]

 Score =  189 bits (479), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 97/137 (70%), Positives = 107/137 (78%), Gaps = 17/137 (12%)

Query: 104 VAADWVPSLWSIMNKVKLEAMMWGAGTALGELPPYFLSRAARLSLLDPD-DVDDL----- 157
           V + W+ SLW+IM KV++EAMMWGAGTALGELPPYF++RAARLS   PD D +DL     
Sbjct: 185 VDSAWIASLWNIMLKVRVEAMMWGAGTALGELPPYFMARAARLSGRPPDEDKEDLIEFEE 244

Query: 158 -----------TLVDKLKLKIETLVNKVGFFGILACASIPNPLFDLAGITCGHFLIPFWT 206
                      TLVDK KL +E LV KVGFFGILACASIPNPLFDLAGITCGHFLIPFWT
Sbjct: 245 LLKKEKHPETMTLVDKSKLFVERLVKKVGFFGILACASIPNPLFDLAGITCGHFLIPFWT 304

Query: 207 FFGATLIGKAVIKMSIQ 223
           FFGATL+GKA IKMSIQ
Sbjct: 305 FFGATLLGKAAIKMSIQ 321

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|24641079|ref|NP_727444.1| transport and golgi organization 5, isoform A [Drosophila melanogaster] gi|24641081|ref|NP_727445.1| transport and golgi organization 5, isoform C [Drosophila melanogaster] gi|281360682|ref|NP_001162716.1| transport and golgi organization 5, isoform D [Drosophila melanogaster] gi|442615859|ref|NP_001259430.1| transport and golgi organization 5, isoform E [Drosophila melanogaster] gi|7291185|gb|AAF46618.1| transport and golgi organization 5, isoform A [Drosophila melanogaster] gi|22832047|gb|AAN09266.1| transport and golgi organization 5, isoform C [Drosophila melanogaster] gi|272506049|gb|ACZ95251.1| transport and golgi organization 5, isoform D [Drosophila melanogaster] gi|372466703|gb|AEX93164.1| FI17817p1 [Drosophila melanogaster] gi|440216639|gb|AGB95273.1| transport and golgi organization 5, isoform E [Drosophila melanogaster]

 Score =  189 bits (479), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 87/130 (66%), Positives = 106/130 (81%), Gaps = 15/130 (11%)

Query: 109 VPSLWSIMNKVKLEAMMWGAGTALGELPPYFLSRAARLSLLDPDDVDDL----------- 157
           VP++WSIM+KV+LEA +WGAGTALGELPPYF+++AARLS  DP+D ++L           
Sbjct: 272 VPNIWSIMSKVRLEAFLWGAGTALGELPPYFMAKAARLSGYDPEDAEELAEFEALNAKRH 331

Query: 158 ----TLVDKLKLKIETLVNKVGFFGILACASIPNPLFDLAGITCGHFLIPFWTFFGATLI 213
               +++D+ KL +E +V +VGFFGILACASIPNPLFDLAGITCGHFL+PFWTFFGATLI
Sbjct: 332 QKNLSMMDRGKLFMERVVERVGFFGILACASIPNPLFDLAGITCGHFLVPFWTFFGATLI 391

Query: 214 GKAVIKMSIQ 223
           GKAVIKM IQ
Sbjct: 392 GKAVIKMHIQ 401

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195350738|ref|XP_002041895.1| GM11289 [Drosophila sechellia] gi|194123700|gb|EDW45743.1| GM11289 [Drosophila sechellia]

 Score =  188 bits (478), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 87/130 (66%), Positives = 106/130 (81%), Gaps = 15/130 (11%)

Query: 109 VPSLWSIMNKVKLEAMMWGAGTALGELPPYFLSRAARLSLLDPDDVDDL----------- 157
           VP++WSIM+KV+LEA +WGAGTALGELPPYF+++A+RLS  DP+D ++L           
Sbjct: 258 VPNIWSIMSKVRLEAFLWGAGTALGELPPYFMAKASRLSGYDPEDAEELAEFEALNAKRH 317

Query: 158 ----TLVDKLKLKIETLVNKVGFFGILACASIPNPLFDLAGITCGHFLIPFWTFFGATLI 213
               +++DK KL +E +V +VGFFGILACASIPNPLFDLAGITCGHFL+PFWTFFGATLI
Sbjct: 318 QKNLSMMDKGKLLMERVVERVGFFGILACASIPNPLFDLAGITCGHFLVPFWTFFGATLI 377

Query: 214 GKAVIKMSIQ 223
           GKAVIKM IQ
Sbjct: 378 GKAVIKMHIQ 387

Source: Drosophila sechellia

Species: Drosophila sechellia

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242013395|ref|XP_002427393.1| vacuole membrane protein, putative [Pediculus humanus corporis] gi|212511767|gb|EEB14655.1| vacuole membrane protein, putative [Pediculus humanus corporis]

 Score =  188 bits (478), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 89/132 (67%), Positives = 105/132 (79%), Gaps = 16/132 (12%)

Query: 108 WVPSLWSIMNKVKLEAMMWGAGTALGELPPYFLSRAARLSLLDPDDVDDL---------- 157
           W PS+++IM+KV+LEAMMWG GTALGELPPYF++RAARLS  DPDD +DL          
Sbjct: 176 WGPSIFNIMSKVRLEAMMWGVGTALGELPPYFMARAARLSGYDPDDKEDLKEFEELRKKK 235

Query: 158 ------TLVDKLKLKIETLVNKVGFFGILACASIPNPLFDLAGITCGHFLIPFWTFFGAT 211
                 +++D+ KL +E LV KVGF GILACASIPNPLFDLAGITCGHFL+PFWTFFGAT
Sbjct: 236 QNSDSLSMLDRAKLFVEKLVEKVGFLGILACASIPNPLFDLAGITCGHFLVPFWTFFGAT 295

Query: 212 LIGKAVIKMSIQ 223
           ++GKAVIKM IQ
Sbjct: 296 VLGKAVIKMHIQ 307

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	238
UNIPROTKB|E1BWQ3	406	VMP1 "Uncharacterized protein"	0.474	0.278	0.634	4.9e-37
ZFIN|ZDB-GENE-030131-8733	406	vmp1 "vacuole membrane protein	0.474	0.278	0.626	4.9e-37
FB|FBgn0052675	530	Tango5 "Transport and Golgi or	0.483	0.216	0.615	1.7e-36
UNIPROTKB|Q0VCK9	406	VMP1 "Vacuole membrane protein	0.474	0.278	0.619	1.7e-36
UNIPROTKB|F1S226	406	LOC100524644 "Uncharacterized	0.474	0.278	0.619	1.7e-36
MGI|MGI:1923159	406	Vmp1 "vacuole membrane protein	0.495	0.290	0.603	1.7e-36
UNIPROTKB|B4DED7	272	VMP1 "cDNA FLJ52586, highly si	0.474	0.415	0.619	2.1e-36
UNIPROTKB|B4DGZ7	309	VMP1 "cDNA FLJ50508, highly si	0.474	0.365	0.619	2.1e-36
UNIPROTKB|Q96GC9	406	VMP1 "Vacuole membrane protein	0.474	0.278	0.619	2.1e-36
UNIPROTKB|Q5R9K4	406	VMP1 "Vacuole membrane protein	0.474	0.278	0.619	2.1e-36

UNIPROTKB|E1BWQ3 VMP1 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 398 (145.2 bits), Expect = 4.9e-37, P = 4.9e-37
 Identities = 80/126 (63%), Positives = 90/126 (71%)

Query:   111 SLWSIMNKVKLEAMMWGAGTALGELPPYFLSRAARLSXXX-------------XXXXXXX 157
             SLW+I++KV+LEA MWGAGTA+GELPPYF++RAARLS                       
Sbjct:   179 SLWAIISKVRLEACMWGAGTAIGELPPYFMARAARLSGAEPDDEEYQEFEEMLEHAETAQ 238

Query:   158 XXXXXXXXXIETLVNKVGFFGILACASIPNPLFDLAGITCGHFLIPFWTFFGATLIGKAV 217
                      ++ LV KVGFFGILACASIPNPLFDLAGITCGHFL+PFWTFFGATLIGKAV
Sbjct:   239 DFASRAKLAVQNLVQKVGFFGILACASIPNPLFDLAGITCGHFLVPFWTFFGATLIGKAV 298

Query:   218 IKMSIQ 223
             IKM IQ
Sbjct:   299 IKMHIQ 304

GO:0000407 "pre-autophagosomal structure" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0007566 "embryo implantation" evidence=IEA

GO:0010506 "regulation of autophagy" evidence=IEA

GO:0016337 "cell-cell adhesion" evidence=IEA

GO:0034329 "cell junction assembly" evidence=IEA

ZFIN|ZDB-GENE-030131-8733 vmp1 "vacuole membrane protein 1" [Danio rerio (taxid:7955)]

 Score = 398 (145.2 bits), Expect = 4.9e-37, P = 4.9e-37
 Identities = 79/126 (62%), Positives = 90/126 (71%)

Query:   111 SLWSIMNKVKLEAMMWGAGTALGELPPYFLSRAARLSXXX-------------XXXXXXX 157
             SLW+IM+KV+LEA MWGAGTA+GELPPYF++RAAR+S                       
Sbjct:   179 SLWTIMSKVRLEACMWGAGTAIGELPPYFMARAARMSGADPDDEDYEEFEEMLEHSQSAQ 238

Query:   158 XXXXXXXXXIETLVNKVGFFGILACASIPNPLFDLAGITCGHFLIPFWTFFGATLIGKAV 217
                      ++ +V KVGFFGILACASIPNPLFDLAGITCGHFLIPFWTFFGATLIGKA+
Sbjct:   239 DFASRAKLAVQNMVQKVGFFGILACASIPNPLFDLAGITCGHFLIPFWTFFGATLIGKAI 298

Query:   218 IKMSIQ 223
             IKM IQ
Sbjct:   299 IKMHIQ 304

GO:0008150 "biological_process" evidence=ND

GO:0003674 "molecular_function" evidence=ND

GO:0005783 "endoplasmic reticulum" evidence=IEA;ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0005773 "vacuole" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0033116 "endoplasmic reticulum-Golgi intermediate compartment membrane" evidence=IEA

GO:0005774 "vacuolar membrane" evidence=IEA

FB|FBgn0052675 Tango5 "Transport and Golgi organization 5" [Drosophila melanogaster (taxid:7227)]

 Score = 393 (143.4 bits), Expect = 1.7e-36, P = 1.7e-36
 Identities = 80/130 (61%), Positives = 92/130 (70%)

Query:   109 VPSLWSIMNKVKLEAMMWGAGTALGELPPYFLSRAARLSXXXXXXXXXXXXXXXXXXX-- 166
             VP++WSIM+KV+LEA +WGAGTALGELPPYF+++AARLS                     
Sbjct:   272 VPNIWSIMSKVRLEAFLWGAGTALGELPPYFMAKAARLSGYDPEDAEELAEFEALNAKRH 331

Query:   167 -------------IETLVNKVGFFGILACASIPNPLFDLAGITCGHFLIPFWTFFGATLI 213
                          +E +V +VGFFGILACASIPNPLFDLAGITCGHFL+PFWTFFGATLI
Sbjct:   332 QKNLSMMDRGKLFMERVVERVGFFGILACASIPNPLFDLAGITCGHFLVPFWTFFGATLI 391

Query:   214 GKAVIKMSIQ 223
             GKAVIKM IQ
Sbjct:   392 GKAVIKMHIQ 401

GO:0003674 "molecular_function" evidence=ND

GO:0007030 "Golgi organization" evidence=IMP

GO:0009306 "protein secretion" evidence=IMP

GO:0005783 "endoplasmic reticulum" evidence=IDA

UNIPROTKB|Q0VCK9 VMP1 "Vacuole membrane protein 1" [Bos taurus (taxid:9913)]

 Score = 393 (143.4 bits), Expect = 1.7e-36, P = 1.7e-36
 Identities = 78/126 (61%), Positives = 89/126 (70%)

Query:   111 SLWSIMNKVKLEAMMWGAGTALGELPPYFLSRAARLSXXX-------------XXXXXXX 157
             SLWSI++KV++EA MWG GTA+GELPPYF++RAARLS                       
Sbjct:   179 SLWSIISKVRIEACMWGIGTAIGELPPYFMARAARLSGAEPDDEEYQEFEEMLEHAETAQ 238

Query:   158 XXXXXXXXXIETLVNKVGFFGILACASIPNPLFDLAGITCGHFLIPFWTFFGATLIGKAV 217
                      ++ LV KVGFFGILACASIPNPLFDLAGITCGHFL+PFWTFFGATLIGKA+
Sbjct:   239 DFASRAKLAVQNLVQKVGFFGILACASIPNPLFDLAGITCGHFLVPFWTFFGATLIGKAI 298

Query:   218 IKMSIQ 223
             IKM IQ
Sbjct:   299 IKMHIQ 304

GO:0016337 "cell-cell adhesion" evidence=ISS

GO:0000421 "autophagic vacuole membrane" evidence=ISS

GO:0005783 "endoplasmic reticulum" evidence=ISS

GO:0034329 "cell junction assembly" evidence=ISS

GO:0010506 "regulation of autophagy" evidence=ISS

GO:0033116 "endoplasmic reticulum-Golgi intermediate compartment membrane" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0007566 "embryo implantation" evidence=IEA

GO:0000407 "pre-autophagosomal structure" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0006914 "autophagy" evidence=IEA

UNIPROTKB|F1S226 LOC100524644 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 393 (143.4 bits), Expect = 1.7e-36, P = 1.7e-36
 Identities = 78/126 (61%), Positives = 89/126 (70%)

Query:   111 SLWSIMNKVKLEAMMWGAGTALGELPPYFLSRAARLSXXX-------------XXXXXXX 157
             SLWSI++KV++EA MWG GTA+GELPPYF++RAARLS                       
Sbjct:   179 SLWSIISKVRIEACMWGIGTAIGELPPYFMARAARLSGAEPDDEEYQEFEEMLEHAQAAQ 238

Query:   158 XXXXXXXXXIETLVNKVGFFGILACASIPNPLFDLAGITCGHFLIPFWTFFGATLIGKAV 217
                      ++ LV KVGFFGILACASIPNPLFDLAGITCGHFL+PFWTFFGATLIGKA+
Sbjct:   239 DFASRAKLAVQNLVQKVGFFGILACASIPNPLFDLAGITCGHFLVPFWTFFGATLIGKAI 298

Query:   218 IKMSIQ 223
             IKM IQ
Sbjct:   299 IKMHIQ 304

GO:0034329 "cell junction assembly" evidence=IEA

GO:0016337 "cell-cell adhesion" evidence=IEA

GO:0010506 "regulation of autophagy" evidence=IEA

GO:0007566 "embryo implantation" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0000407 "pre-autophagosomal structure" evidence=IEA

MGI|MGI:1923159 Vmp1 "vacuole membrane protein 1" [Mus musculus (taxid:10090)]

 Score = 393 (143.4 bits), Expect = 1.7e-36, P = 1.7e-36
 Identities = 79/131 (60%), Positives = 91/131 (69%)

Query:   106 ADWVPSLWSIMNKVKLEAMMWGAGTALGELPPYFLSRAARLSXXX-------------XX 152
             A+   SLWSI++KV++EA MWG GTA+GELPPYF++RAARLS                  
Sbjct:   174 AEGAISLWSIISKVRIEACMWGIGTAIGELPPYFMARAARLSGAEPDDEEYQEFEEMLEH 233

Query:   153 XXXXXXXXXXXXXXIETLVNKVGFFGILACASIPNPLFDLAGITCGHFLIPFWTFFGATL 212
                           ++ LV KVGFFGILACASIPNPLFDLAGITCGHFL+PFWTFFGATL
Sbjct:   234 AEAAQDFASRAKLAVQKLVQKVGFFGILACASIPNPLFDLAGITCGHFLVPFWTFFGATL 293

Query:   213 IGKAVIKMSIQ 223
             IGKA+IKM IQ
Sbjct:   294 IGKAIIKMHIQ 304

GO:0000407 "pre-autophagosomal structure" evidence=IDA

GO:0000421 "autophagic vacuole membrane" evidence=ISO

GO:0003674 "molecular_function" evidence=ND

GO:0005773 "vacuole" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=ISO

GO:0005886 "plasma membrane" evidence=IEA

GO:0006914 "autophagy" evidence=IEA

GO:0007155 "cell adhesion" evidence=IEA

GO:0007566 "embryo implantation" evidence=IDA

GO:0010506 "regulation of autophagy" evidence=ISO;IDA

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016337 "cell-cell adhesion" evidence=ISO

GO:0034329 "cell junction assembly" evidence=ISO

UNIPROTKB|B4DED7 VMP1 "cDNA FLJ52586, highly similar to Homo sapiens transmembrane protein 49 (TMEM49), mRNA" [Homo sapiens (taxid:9606)]

 Score = 392 (143.0 bits), Expect = 2.1e-36, P = 2.1e-36
 Identities = 78/126 (61%), Positives = 89/126 (70%)

Query:   111 SLWSIMNKVKLEAMMWGAGTALGELPPYFLSRAARLSXXX-------------XXXXXXX 157
             SLWSI++KV++EA MWG GTA+GELPPYF++RAARLS                       
Sbjct:    45 SLWSIISKVRIEACMWGIGTAIGELPPYFMARAARLSGAEPDDEEYQEFEEMLEHAESAQ 104

Query:   158 XXXXXXXXXIETLVNKVGFFGILACASIPNPLFDLAGITCGHFLIPFWTFFGATLIGKAV 217
                      ++ LV KVGFFGILACASIPNPLFDLAGITCGHFL+PFWTFFGATLIGKA+
Sbjct:   105 DFASRAKLAVQKLVQKVGFFGILACASIPNPLFDLAGITCGHFLVPFWTFFGATLIGKAI 164

Query:   218 IKMSIQ 223
             IKM IQ
Sbjct:   165 IKMHIQ 170

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|B4DGZ7 VMP1 "cDNA FLJ50508, highly similar to Homo sapiens transmembrane protein 49 (TMEM49), mRNA" [Homo sapiens (taxid:9606)]

 Score = 392 (143.0 bits), Expect = 2.1e-36, P = 2.1e-36
 Identities = 78/126 (61%), Positives = 89/126 (70%)

Query:   111 SLWSIMNKVKLEAMMWGAGTALGELPPYFLSRAARLSXXX-------------XXXXXXX 157
             SLWSI++KV++EA MWG GTA+GELPPYF++RAARLS                       
Sbjct:    82 SLWSIISKVRIEACMWGIGTAIGELPPYFMARAARLSGAEPDDEEYQEFEEMLEHAESAQ 141

Query:   158 XXXXXXXXXIETLVNKVGFFGILACASIPNPLFDLAGITCGHFLIPFWTFFGATLIGKAV 217
                      ++ LV KVGFFGILACASIPNPLFDLAGITCGHFL+PFWTFFGATLIGKA+
Sbjct:   142 DFASRAKLAVQKLVQKVGFFGILACASIPNPLFDLAGITCGHFLVPFWTFFGATLIGKAI 201

Query:   218 IKMSIQ 223
             IKM IQ
Sbjct:   202 IKMHIQ 207

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|Q96GC9 VMP1 "Vacuole membrane protein 1" [Homo sapiens (taxid:9606)]

 Score = 392 (143.0 bits), Expect = 2.1e-36, P = 2.1e-36
 Identities = 78/126 (61%), Positives = 89/126 (70%)

Query:   111 SLWSIMNKVKLEAMMWGAGTALGELPPYFLSRAARLSXXX-------------XXXXXXX 157
             SLWSI++KV++EA MWG GTA+GELPPYF++RAARLS                       
Sbjct:   179 SLWSIISKVRIEACMWGIGTAIGELPPYFMARAARLSGAEPDDEEYQEFEEMLEHAESAQ 238

Query:   158 XXXXXXXXXIETLVNKVGFFGILACASIPNPLFDLAGITCGHFLIPFWTFFGATLIGKAV 217
                      ++ LV KVGFFGILACASIPNPLFDLAGITCGHFL+PFWTFFGATLIGKA+
Sbjct:   239 DFASRAKLAVQKLVQKVGFFGILACASIPNPLFDLAGITCGHFLVPFWTFFGATLIGKAI 298

Query:   218 IKMSIQ 223
             IKM IQ
Sbjct:   299 IKMHIQ 304

GO:0006914 "autophagy" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0000407 "pre-autophagosomal structure" evidence=IEA

GO:0007566 "embryo implantation" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0033116 "endoplasmic reticulum-Golgi intermediate compartment membrane" evidence=IEA

GO:0034329 "cell junction assembly" evidence=IMP

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0010506 "regulation of autophagy" evidence=ISS

GO:0016337 "cell-cell adhesion" evidence=IMP

GO:0005515 "protein binding" evidence=IPI

GO:0000421 "autophagic vacuole membrane" evidence=ISS

UNIPROTKB|Q5R9K4 VMP1 "Vacuole membrane protein 1" [Pongo abelii (taxid:9601)]

 Score = 392 (143.0 bits), Expect = 2.1e-36, P = 2.1e-36
 Identities = 78/126 (61%), Positives = 89/126 (70%)

Query:   111 SLWSIMNKVKLEAMMWGAGTALGELPPYFLSRAARLSXXX-------------XXXXXXX 157
             SLWSI++KV++EA MWG GTA+GELPPYF++RAARLS                       
Sbjct:   179 SLWSIISKVRIEACMWGIGTAIGELPPYFMARAARLSGAEPDDEEYQEFEEMLEHAESAQ 238

Query:   158 XXXXXXXXXIETLVNKVGFFGILACASIPNPLFDLAGITCGHFLIPFWTFFGATLIGKAV 217
                      ++ LV KVGFFGILACASIPNPLFDLAGITCGHFL+PFWTFFGATLIGKA+
Sbjct:   239 DFASRAKLAVQKLVQKVGFFGILACASIPNPLFDLAGITCGHFLVPFWTFFGATLIGKAI 298

Query:   218 IKMSIQ 223
             IKM IQ
Sbjct:   299 IKMHIQ 304

GO:0000421 "autophagic vacuole membrane" evidence=ISS

GO:0005783 "endoplasmic reticulum" evidence=ISS

GO:0010506 "regulation of autophagy" evidence=ISS

GO:0016337 "cell-cell adhesion" evidence=ISS

GO:0034329 "cell junction assembly" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q96GC9	VMP1_HUMAN	No assigned EC number	0.6666	0.4747	0.2783	yes	N/A
Q68EQ9	VMP1_XENTR	No assigned EC number	0.6587	0.4747	0.2783	yes	N/A
Q91ZQ0	VMP1_RAT	No assigned EC number	0.6666	0.4747	0.2783	yes	N/A
Q0VCK9	VMP1_BOVIN	No assigned EC number	0.6666	0.4747	0.2783	yes	N/A
Q9XWU8	VMP1_CAEEL	No assigned EC number	0.5070	0.5210	0.2707	yes	N/A
Q5R9K4	VMP1_PONAB	No assigned EC number	0.6666	0.4747	0.2783	yes	N/A
Q6NYY9	VMP1_DANRE	No assigned EC number	0.6484	0.4663	0.2733	yes	N/A
Q99KU0	VMP1_MOUSE	No assigned EC number	0.6439	0.5	0.2931	yes	N/A
Q54NL4	VMP1_DICDI	No assigned EC number	0.5538	0.4789	0.2828	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	238
pfam09335	123	pfam09335, SNARE_assoc, SNARE associated Golgi pro	4e-06

>gnl|CDD|220186 pfam09335, SNARE_assoc, SNARE associated Golgi protein

 Score = 44.6 bits (106), Expect = 4e-06
 Identities = 24/95 (25%), Positives = 31/95 (32%), Gaps = 12/95 (12%)

Query: 128 AGTALGELPPYFLSRAARLS-----LLDPDDVDDLTLVDKLKLKIETLVNKVGFFGILAC 182
            G  LG L  Y L R          LL       L        ++E LV + GF  +L  
Sbjct: 25  LGALLGSLLAYLLGRYLGRRALRRRLLKEKAFQRL-------QRVERLVERYGFKALLLL 77

Query: 183 ASIPNPLFDLAGITCGHFLIPFWTFFGATLIGKAV 217
             +P    DL     G   + F  F   T +G   
Sbjct: 78  RLLPGVPRDLVNYVAGLSRVSFRRFLLGTFLGILP 112

This is a family of SNARE associated Golgi proteins. The yeast member of this family localises with the t-SNARE Tlg2. Length = 123

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	238
KOG1109|consensus	440		100.0
PF09335	123	SNARE_assoc: SNARE associated Golgi protein; Inter	98.79
COG1238	161	Predicted membrane protein [Function unknown]	98.58
KOG0985|consensus	1666		97.88
COG0398	223	Uncharacterized conserved protein [Function unknow	97.76
KOG1109|consensus	440		97.48
PRK10847	219	hypothetical protein; Provisional	97.21
COG0586	208	DedA Uncharacterized membrane-associated protein [	96.92
PF06695	121	Sm_multidrug_ex: Putative small multi-drug export	91.22

>KOG1109|consensus

Probab=100.00  E-value=2e-58  Score=432.70  Aligned_cols=152  Identities=58%  Similarity=1.014  Sum_probs=142.2

Q ss_pred             ecccccccCCCCCCCCCCCcccCCCcccccCCCCCCCCCCCCchHHHHHHHHHHHHHHHHhhhhccCCcHHHHHHHHHhc
Q psy13520         68 CESLSVPCAPVDIEEPALSKRRTDSYSEINGGESPGVAADWVPSLWSIMNKVKLEAMMWGAGTALGELPPYFLSRAARLS  147 (238)
Q Consensus        68 ~t~qAmlCgspdF~sPPYp~~r~~sw~~~~Cp~~~~~~~~~~vt~~~i~~kV~~ea~lWG~GTALGELppYf~araarls  147 (238)
                      .++++|+|+++||+.||||++       ++||+....  .+.+.+|+|++||+.||++||+|||+||||||||+||||++
T Consensus       166 vT~aayec~s~nfp~ppYP~~-------i~Cpet~~s--~~v~~~wsi~~kVrieailwg~gtalgElppyFmaraarls  236 (440)
T KOG1109|consen  166 VTLAAYECNSVNFPQPPYPDD-------IICPETEES--RGVPGLWSIFSKVRIEAILWGAGTALGELPPYFMARAARLS  236 (440)
T ss_pred             ccchhhhhcccCCCCCCCCCC-------CCCCCchhc--ccCccHHHHHHHHHhhhhhhccccccccCchHHHHHHHHhc
Confidence            588999999999999999988       999998543  24556999999999999999999999999999999999999


Q ss_pred             CCCCCCchh--------------hhHHHHHHHHHHHHHHhhhhhhhhhhhcCCCchhhhhhhhccccchhhHHHHHHHhh
Q psy13520        148 LLDPDDVDD--------------LTLVDKLKLKIETLVNKVGFFGILACASIPNPLFDLAGITCGHFLIPFWTFFGATLI  213 (238)
Q Consensus       148 g~~~d~~e~--------------~~~~~~~K~~~~~~~~k~Gf~~Il~~asiPNplFDLaGi~cGhFlvPFw~Ff~AtlI  213 (238)
                      |.++||||+              .+..+|+|.|+++.+||+||+|||+|||||||+||||||+||||++|||+|||||||
T Consensus       237 g~~p~dee~~ef~~g~~~d~e~~~~r~~r~k~wv~~~v~~lgffgIli~aSIpnPlfdlaGitcghflvpfw~ffGaTLi  316 (440)
T KOG1109|consen  237 GVEPDDEEYTEFEEGLNWDAEIALSRVHRAKSWVENQVQRLGFFGILICASIPNPLFDLAGITCGHFLVPFWTFFGATLI  316 (440)
T ss_pred             CCCCcHHHhhhhhhhhhhhHHHHhhHHHHhHHHHHHHhhhcccceeEEEecCCCcchhhcccccccccchHHHHhhHHHH
Confidence            999999765              457899999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhheeeceeEEEe
Q psy13520        214 GKAVIKMSIQGNKWV  228 (238)
Q Consensus       214 GKaiiK~~iQ~~~~v  228 (238)
                      |||+||||||++|..
T Consensus       317 gKaiikmhIq~~fVi  331 (440)
T KOG1109|consen  317 GKAIIKMHIQKIFVI  331 (440)
T ss_pred             HHHHHHHhhheEEEE
Confidence            999999999999853

>PF09335 SNARE_assoc: SNARE associated Golgi protein; InterPro: IPR015414 This is a entry contains SNARE associated Golgi proteins

Probab=98.79  E-value=1.2e-08  Score=78.45  Aligned_cols=96  Identities=28%  Similarity=0.380  Sum_probs=73.6

Q ss_pred             HHHHHHHHHHhhhhccCCcHHHHHHHHHh--cCCCCCCchhhhHHHHHHHHHHHHHHhhhhhhhhhhhcCCCchhhhhhh
Q psy13520        118 KVKLEAMMWGAGTALGELPPYFLSRAARL--SLLDPDDVDDLTLVDKLKLKIETLVNKVGFFGILACASIPNPLFDLAGI  195 (238)
Q Consensus       118 kV~~ea~lWG~GTALGELppYf~araarl--sg~~~d~~e~~~~~~~~K~~~~~~~~k~Gf~~Il~~asiPNplFDLaGi  195 (238)
                      ....-.++..+|+.+|.+..|+++|-...  ..++.   ...+..++. .+.++.+||+|++.++++..+|-..+|+..+
T Consensus        15 g~~~~~~~~~~g~~~g~~~~y~lgr~~~~~~~~~~~---~~~~~~~~~-~~~~~~~~~~g~~~l~~~~~~P~~P~~~~~~   90 (123)
T PF09335_consen   15 GPWLGFLIATLGAVLGSLLAYLLGRYFGRRRLRRKL---RKKKRIKRI-ERIERWFQKYGFWVLFLSRFIPGLPFDVVNY   90 (123)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHh---cchHHHHHH-HHHHHHHhhhhHHHHHHHHHHHHccHHHHHH
Confidence            45556677789999999999999985432  11000   012223332 3467788999999999998888666999999


Q ss_pred             hccccchhhHHHHHHHhhhhhh
Q psy13520        196 TCGHFLIPFWTFFGATLIGKAV  217 (238)
Q Consensus       196 ~cGhFlvPFw~Ff~AtlIGKai  217 (238)
                      +||...||+|+|+.++++|+.+
T Consensus        91 ~ag~~~~~~~~f~~~~~~g~~~  112 (123)
T PF09335_consen   91 LAGITRMPFRRFFLASLIGKLP  112 (123)
T ss_pred             HHHccCCCHHHHHHHHHHHHHH
Confidence            9999999999999999999986

The yeast member of this family (P36164 from SWISSPROT) localises with the t-SNARE Tlg2 [].

>COG1238 Predicted membrane protein [Function unknown]

Probab=98.58  E-value=7.6e-08  Score=82.20  Aligned_cols=96  Identities=21%  Similarity=0.200  Sum_probs=72.3

Q ss_pred             HHHHHHHHHHHhhhhccCCcHHHHHHHHHhcCCCCCCchhhhHHHHHHHHHHHHHHhhhhhhhhhhhcCCCchhhhhhhh
Q psy13520        117 NKVKLEAMMWGAGTALGELPPYFLSRAARLSLLDPDDVDDLTLVDKLKLKIETLVNKVGFFGILACASIPNPLFDLAGIT  196 (238)
Q Consensus       117 ~kV~~ea~lWG~GTALGELppYf~araarlsg~~~d~~e~~~~~~~~K~~~~~~~~k~Gf~~Il~~asiPNplFDLaGi~  196 (238)
                      .++...+.+-.+|+.+|.+..|++||-+.-.-.+.   ....-.++.+...++..+|||.|.+++..--|=|  |+-+++
T Consensus        49 ~~~~~~~~vAt~gs~lG~~~~y~lG~~~~~~~~~~---~~~~~~~~~~~~~~~~~~ryg~~~ll~s~lp~ig--d~~t~~  123 (161)
T COG1238          49 LNAWILALVATLGSVLGGLVNYALGRFLPEFIARR---WFPGSEEALEKLQEKWYRRYGVWTLLLSWLPPIG--DVLTLL  123 (161)
T ss_pred             CchHHHHHHHHHHhhHhHHHHHHHHhcchHHHHHH---hhcchHHHHHHHHHHHHHHHHHHHHHHHhccccc--hHHHHH
Confidence            56778889999999999999999998443332221   0000112333344458999999999987654445  999999


Q ss_pred             ccccchhhHHHHHHHhhhhhh
Q psy13520        197 CGHFLIPFWTFFGATLIGKAV  217 (238)
Q Consensus       197 cGhFlvPFw~Ff~AtlIGKai  217 (238)
                      ||.+.+|||+|.++.+|||+.
T Consensus       124 aG~~~~~~~~f~~~~~igk~~  144 (161)
T COG1238         124 AGWLRLNFLPFILLVFLGKAA  144 (161)
T ss_pred             HHHHHccHHHHHHHHHHHHHH
Confidence            999999999999999999995

>KOG0985|consensus

Probab=97.88  E-value=4.1e-06  Score=88.37  Aligned_cols=57  Identities=19%  Similarity=0.129  Sum_probs=52.0

Q ss_pred             HHHHHHHhhccCCCCcccccccchhhhcccccccCCcceeeecccccccCCCCCCCCCCCc
Q psy13520         27 PINLVMCESLSVPCAPVDIEEPALSKRRTDSYSTQPINLIMCESLSVPCAPVDIEEPALSK   87 (238)
Q Consensus        27 ~liqVmREy~s~~~~kVDkLe~ses~Rk~ee~~~ep~pLm~~t~qAmlCgspdF~sPPYp~   87 (238)
                      -+|||||||++    |||||+..|+.|++|++++|.++.|.+++|.+...++.++.||.+.
T Consensus      1597 y~iq~~~ey~~----kv~kl~~~e~~~~~~~~~~~~~~~~~~~~q~~~~~~~a~~~~p~~~ 1653 (1666)
T KOG0985|consen 1597 YFIQVMREYLS----KVDKLEKDEAQREKEEKEQEEKNGMSMQGQLLMLLGLAMPAPPMPF 1653 (1666)
T ss_pred             HHHHHHHHHHH----HHHHHhhhhhcchhhhhhhhhccccccCcchHHhcCcCCCCCCCCC
Confidence            47999999999    9999999999999999999999999999999999998888876433

>COG0398 Uncharacterized conserved protein [Function unknown]

Probab=97.76  E-value=6e-05  Score=66.93  Aligned_cols=94  Identities=30%  Similarity=0.333  Sum_probs=69.1

Q ss_pred             HHHHHHHHHHH-----hhhhccCCcHHHHHHHHHhcCCCCCCchhhhHHH--HHHHHHHHHHHhhhhhhhhhhhcCCCch
Q psy13520        117 NKVKLEAMMWG-----AGTALGELPPYFLSRAARLSLLDPDDVDDLTLVD--KLKLKIETLVNKVGFFGILACASIPNPL  189 (238)
Q Consensus       117 ~kV~~ea~lWG-----~GTALGELppYf~araarlsg~~~d~~e~~~~~~--~~K~~~~~~~~k~Gf~~Il~~asiPNpl  189 (238)
                      ..+.+...+||     +|+-+|....|+.+|   ..|++    ..+++..  +....+.+.++|.|++.++++--+|=--
T Consensus        74 ~~g~ifG~~~G~~~s~~G~~~gs~~~Fll~R---~~gr~----~~~~~~~~~~~~~~~~~~~~~~g~~~i~~lrl~P~~P  146 (223)
T COG0398          74 AGGLLFGPFLGFLYSLIGATAGSTLAFLLAR---YLGRD----WVLKFVGGKEKVQRIDAGLERNGFWAILLLRLIPIFP  146 (223)
T ss_pred             HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH---HHhHH----HHHHHhcccHHHHHHHHHHHhCChHHHHHHHHhhcCC
Confidence            44555566666     688999999999997   22211    0000101  1123456669999999999998777666


Q ss_pred             hhhhhhhccccchhhHHHHHHHhhhhhh
Q psy13520        190 FDLAGITCGHFLIPFWTFFGATLIGKAV  217 (238)
Q Consensus       190 FDLaGi~cGhFlvPFw~Ff~AtlIGKai  217 (238)
                      ||+....||...|++|.|+.||++||.+
T Consensus       147 ~~lvn~aaglt~is~~~f~ias~lG~~P  174 (223)
T COG0398         147 FDLVNYAAGLTGISFRDFAIATLLGKLP  174 (223)
T ss_pred             HHHHHHHHhccCCcHHHHHHHHHHhccc
Confidence            9999999999999999999999999974

>KOG1109|consensus

Probab=97.48  E-value=7e-05  Score=72.31  Aligned_cols=76  Identities=33%  Similarity=0.442  Sum_probs=60.2

Q ss_pred             CCchHHHHHHHHHHHHHHHHhhhhccCCcHHHHHHHHHhcCCCC-------CCch---------------h---------
Q psy13520        108 WVPSLWSIMNKVKLEAMMWGAGTALGELPPYFLSRAARLSLLDP-------DDVD---------------D---------  156 (238)
Q Consensus       108 ~~vt~~~i~~kV~~ea~lWG~GTALGELppYf~araarlsg~~~-------d~~e---------------~---------  156 (238)
                      ....+.+|+.+|++++.+||.||+.||+|+||..||++....-.       ++.|               +         
T Consensus         7 ~~k~~~~~~~~~~~s~~l~g~~~~~~~~~~~~~~rAG~~t~~~~~~~~~~~~R~er~~~vlwr~p~~tl~y~~~ei~~~~   86 (440)
T KOG1109|consen    7 SRKPLTSILPQVQLSKILWGIGTAEGELPMYFLSRAGLKTDPSSIFLQKLRERLERCILVLWRQPLITLEYFDLEIFELL   86 (440)
T ss_pred             ccccccccCcchhhHHHHhcccccccCCCcccccccccCCCcchhhHHHHHhhhhhheEEEecCcchhHHHhhHHHHHHH
Confidence            46788899999999999999999999999999999987654211       0011               1         


Q ss_pred             ---hhHHHHHHHHHHHHHHhhhhhhhhhhh
Q psy13520        157 ---LTLVDKLKLKIETLVNKVGFFGILACA  183 (238)
Q Consensus       157 ---~~~~~~~K~~~~~~~~k~Gf~~Il~~a  183 (238)
                         ...+.+.|+|+..+.+..++|.++...
T Consensus        87 ~~wst~Ll~~k~wLlt~~~~l~~f~~ly~~  116 (440)
T KOG1109|consen   87 REWSTKLLAVKRWLLTFSQLLNVFTVLYLT  116 (440)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence               224668899999999999999998873

>PRK10847 hypothetical protein; Provisional

Probab=97.21  E-value=0.00048  Score=60.33  Aligned_cols=87  Identities=15%  Similarity=0.104  Sum_probs=61.3

Q ss_pred             HhhhhccCCcHHHHHHHHHhcCCCCCCchhhh-HHHHHHHHHHHHHHhhhhhhhhhhhcCCCchhhhhhhhccccchhhH
Q psy13520        127 GAGTALGELPPYFLSRAARLSLLDPDDVDDLT-LVDKLKLKIETLVNKVGFFGILACASIPNPLFDLAGITCGHFLIPFW  205 (238)
Q Consensus       127 G~GTALGELppYf~araarlsg~~~d~~e~~~-~~~~~K~~~~~~~~k~Gf~~Il~~asiPNplFDLaGi~cGhFlvPFw  205 (238)
                      -+|..+|..-.|++||-   .|++.-+..... +-++--.+.+++++|||.+.|+++--+|= .=++..+.||...||++
T Consensus        79 ~~Ga~lG~~i~Y~lGr~---~G~~~l~~~~~~~~~~~~l~~~~~~~~r~G~~~v~i~RfiP~-~R~~~~~~aG~~~m~~~  154 (219)
T PRK10847         79 LIAAIVGDAVNYTIGRL---FGEKLFSNPNSKIFRRSYLDKTHQFYEKHGGKTIILARFVPI-VRTFAPFVAGMGHMSYR  154 (219)
T ss_pred             HHHHHHHHHHHHHHHHH---hCHHHhhccccccCCHHHHHHHHHHHHHcCCEEEEeeCCccc-hHhHHHHHhHhcCCChH
Confidence            38899999999999983   222100000000 00111145677899999999999887772 22778899999999999


Q ss_pred             HHHHHHhhhhhh
Q psy13520        206 TFFGATLIGKAV  217 (238)
Q Consensus       206 ~Ff~AtlIGKai  217 (238)
                      +|+.++++|..+
T Consensus       155 ~F~~~~~lg~~~  166 (219)
T PRK10847        155 HFAAYNVIGALL  166 (219)
T ss_pred             HHHHHHHHHHHH
Confidence            999999999874

>COG0586 DedA Uncharacterized membrane-associated protein [Function unknown]

Probab=96.92  E-value=0.0014  Score=57.17  Aligned_cols=86  Identities=24%  Similarity=0.327  Sum_probs=63.0

Q ss_pred             HHhhhhccCCcHHHHHHHH--HhcCCCCCCc--hhhhHHHHHHHHHHHHHHhhhhhhhhhhhcCCCchhhhhhhhccccc
Q psy13520        126 WGAGTALGELPPYFLSRAA--RLSLLDPDDV--DDLTLVDKLKLKIETLVNKVGFFGILACASIPNPLFDLAGITCGHFL  201 (238)
Q Consensus       126 WG~GTALGELppYf~araa--rlsg~~~d~~--e~~~~~~~~K~~~~~~~~k~Gf~~Il~~asiPNplFDLaGi~cGhFl  201 (238)
                      -.+|..+|...-|+.||-.  ++.- +..+.  -..+.+    ++.+++++|||.+.|+++=-+| .+=-+..+.+|.-.
T Consensus        63 ~~lga~lGd~i~Y~iGr~~G~~~l~-~~~~~~~~~~~~l----~~a~~~f~r~G~~~vf~~RFip-~vRt~ip~~AG~~~  136 (208)
T COG0586          63 ATLGALLGDLISYWIGRRFGRKLLR-KLWSYRLLKRKKL----DKAELLFERHGLFAIFLGRFIP-GVRTLVPIVAGMSK  136 (208)
T ss_pred             HHHHHHHHHHHHHHHHHHhcHHHHH-hhhhhccCCHHHH----HHHHHHHHHcCchhhhhhcccc-hhHhhhhHhhhhcc
Confidence            3578999999999999722  1111 11110  012233    4457779999999999998888 46667889999999


Q ss_pred             hhhHHHHHHHhhhhhh
Q psy13520        202 IPFWTFFGATLIGKAV  217 (238)
Q Consensus       202 vPFw~Ff~AtlIGKai  217 (238)
                      ||+++|..++++|-.+
T Consensus       137 m~~~~F~~~n~~ga~i  152 (208)
T COG0586         137 MPLRRFLLYNILGALL  152 (208)
T ss_pred             CChHHHHHHHHHHHHH
Confidence            9999999999999764

>PF06695 Sm_multidrug_ex: Putative small multi-drug export protein; InterPro: IPR009577 This family contains a small number of putative small multi-drug export proteins

Probab=91.22  E-value=0.46  Score=38.63  Aligned_cols=51  Identities=20%  Similarity=0.253  Sum_probs=40.8

Q ss_pred             HHHHHHhhhhhhhhhhhcCCCch--hhhhhhhccccchhhHHHHHHHhhhhhh
Q psy13520        167 IETLVNKVGFFGILACASIPNPL--FDLAGITCGHFLIPFWTFFGATLIGKAV  217 (238)
Q Consensus       167 ~~~~~~k~Gf~~Il~~asiPNpl--FDLaGi~cGhFlvPFw~Ff~AtlIGKai  217 (238)
                      -.+.++|||++|+.++.++|=|.  =-.+.+.+-.+.|++++=|.|.++|=.+
T Consensus        65 ~~~~i~kyg~~GL~lFVaIPlP~TG~wtgal~a~llg~~~~~~~~ai~~Gv~i  117 (121)
T PF06695_consen   65 KSKKIEKYGFWGLALFVAIPLPGTGAWTGALIASLLGMDKKKAFLAIFLGVLI  117 (121)
T ss_pred             HHHHHHHHhHHHHHHHHhCCCCcchHHHHHHHHHHhCCCHHHHHHHHHHHHHH
Confidence            56789999999999999999331  1345667778899999999999998654

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	238
3lvg_A	624	Clathrin heavy chain 1; SELF assembly, coated PIT,	97.23
3qil_A	125	Clathrin heavy chain 1; clathrin trimerization dom	97.03

>3lvg_A Clathrin heavy chain 1; SELF assembly, coated PIT, cytoplasmic vesicle, membrane, Ca structural protein; 7.94A {Bos taurus} PDB: 3lvh_A

Probab=97.23  E-value=1.7e-05  Score=78.15  Aligned_cols=62  Identities=21%  Similarity=0.232  Sum_probs=34.7

Q ss_pred             ccccCCCCCCChHHHHHHHhhccCCCCcccccccchhhhcccccccCCcceeeecccccccCCCCCCCCC
Q psy13520         15 SFSSATMPQPTQPINLVMCESLSVPCAPVDIEEPALSKRRTDSYSTQPINLIMCESLSVPCAPVDIEEPA   84 (238)
Q Consensus        15 ~~~~~~~~~~~~~liqVmREy~s~~~~kVDkLe~ses~Rk~ee~~~ep~pLm~~t~qAmlCgspdF~sPP   84 (238)
                      ....-+||-    +|||||||++    |||+|+..+++|++++..++++|++.+.+++|.+++|..+.||
T Consensus       539 ~l~D~~mPY----~Iq~~re~~~----kv~~L~~~~~~r~~~~~~~~~~~~~~~~~~lm~~~gp~~~~p~  600 (624)
T 3lvg_A          539 NIMDFAMPY----FIQVMKEYLT----KVDKLDASESLRKEEEQATETQPIVYGQPQLMLTAGPSVAVPP  600 (624)
T ss_dssp             CSSSCCCCS----STTTTTTHHH----HHHHHHHHHHHHHHHHHHHHCC---------------------
T ss_pred             cccccccch----HHHHHHHHHH----HHHHHHHHHHHHHhhhhccccCcccCCCccchhhcCCCCCCCC
Confidence            344446763    6999999999    9999999999999888888888887777789999998876553

>3qil_A Clathrin heavy chain 1; clathrin trimerization domain, endocytosis, structural prote; 3.92A {Bos taurus}

Probab=97.03  E-value=0.00013  Score=59.47  Aligned_cols=37  Identities=30%  Similarity=0.321  Sum_probs=30.7

Q ss_pred             ccccccCCCCCCChHHHHHHHhhccCCCCcccccccchhhhcccc
Q psy13520         13 RSSFSSATMPQPTQPINLVMCESLSVPCAPVDIEEPALSKRRTDS   57 (238)
Q Consensus        13 ~~~~~~~~~~~~~~~liqVmREy~s~~~~kVDkLe~ses~Rk~ee   57 (238)
                      |.....-+||    .+|||||||++    |||+|+.++++|++||
T Consensus        89 r~~l~Df~mP----Y~Iqv~re~~~----kv~~L~~~~~~r~~~~  125 (125)
T 3qil_A           89 RHNIMDFAMP----YFIQVMKEYLT----KVDKLDASESLRKEEE  125 (125)
T ss_dssp             SSSCCCCCCC----SHHHHHHHHHH----HHHHHHHHTTTTTTTC
T ss_pred             Hhccccccch----hHHHHHHHHHH----HHHHHHHHHHHhhhcC
Confidence            3444445676    58999999999    9999999999999886

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00