Psyllid ID: psy16466


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-
MMEYYLPDVRDRQFLIHLHKRAKKVGFPLEQYNCLKNECGKLENDLARLRDPLIPPYRGYEFQVPSDLSYKQPSSSINKFKEQIKMILSKQSHGANKNDTS
ccccccccHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccHHHHHHHHHHHHHHHHcccccccccc
cccEEcccHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccHHHHHHHHHHHHHHccccccccccc
mmeyylpdvrdRQFLIHLHKRakkvgfpleqyNCLKNECGKLENDlarlrdplippyrgyefqvpsdlsykqpsssiNKFKEQIKMILSkqshgankndts
mmeyylpdvrdRQFLIHLHKRAKKVGFPLEQYNCLKNECGKLENDLARLRDPLIPPYRGYEFQVPSDLSYKQPSSSINKFKEQIKMIlskqshgankndts
MMEYYLPDVRDRQFLIHLHKRAKKVGFPLEQYNCLKNECGKLENDLARLRDPLIPPYRGYEFQVPSDLSYKQPSSSINKFKEQIKMILSKQSHGANKNDTS
***YYLPDVRDRQFLIHLHKRAKKVGFPLEQYNCLKNECGKLENDLARLRDPLIPPYRGYEFQV*************************************
MMEYYLPDVRDRQFLIHLHKRAKKVGFPLEQYNCLKNECGKLENDLARLRDPLIPPYRGY*****************************************
MMEYYLPDVRDRQFLIHLHKRAKKVGFPLEQYNCLKNECGKLENDLARLRDPLIPPYRGYEFQVPSDLSYKQPSSSINKFKEQIKMILSK***********
*MEYYLPDVRDRQFLIHLHKRAKKVGFPLEQYNCLKNECGKLENDLARLRDPLIPPYRGYEFQVPSDL******SSINKF****KMILS************
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooo
iiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MMEYYLPDVRDRQFLIHLHKRAKKVGFPLEQYNCLKNECGKLENDLARLRDPLIPPYRGYEFQVPSDLSYKQPSSSINKFKEQIKMILSKQSHGANKNDTS
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query101 2.2.26 [Sep-21-2011]
Q8NE86351 Calcium uniporter protein yes N/A 0.504 0.145 0.568 2e-09
Q3UMR5350 Calcium uniporter protein yes N/A 0.504 0.145 0.568 2e-09
Q08BI9376 Calcium uniporter protein yes N/A 0.504 0.135 0.529 2e-09
>sp|Q8NE86|MCU_HUMAN Calcium uniporter protein, mitochondrial OS=Homo sapiens GN=MCU PE=1 SV=1 Back     alignment and function desciption
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/51 (56%), Positives = 35/51 (68%)

Query: 3   EYYLPDVRDRQFLIHLHKRAKKVGFPLEQYNCLKNECGKLENDLARLRDPL 53
           EY  P+ RDRQ+L+  HK AKK  F LE+YN LK+   + E DL RLRDPL
Sbjct: 288 EYVYPEARDRQYLLFFHKGAKKSRFDLEKYNQLKDAIAQAEMDLKRLRDPL 338




Mitochondrial inner membrane calcium transporter that mediates calcium uptake into mitochondrion.
Homo sapiens (taxid: 9606)
>sp|Q3UMR5|MCU_MOUSE Calcium uniporter protein, mitochondrial OS=Mus musculus GN=Mcu PE=2 SV=2 Back     alignment and function description
>sp|Q08BI9|MCU_DANRE Calcium uniporter protein, mitochondrial OS=Danio rerio GN=mcu PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query101
193647919 396 PREDICTED: coiled-coil domain-containing 0.980 0.25 0.382 1e-14
357615505 211 hypothetical protein KGM_13677 [Danaus p 0.504 0.241 0.686 1e-12
242008883 283 conserved hypothetical protein [Pediculu 0.534 0.190 0.614 1e-11
321471658 315 hypothetical protein DAPPUDRAFT_302367 [ 0.504 0.161 0.588 2e-10
170052216 268 conserved hypothetical protein [Culex qu 0.504 0.190 0.607 9e-10
312374170 257 hypothetical protein AND_16375 [Anophele 0.504 0.198 0.607 1e-09
158295687 446 AGAP006330-PA [Anopheles gambiae str. PE 0.504 0.114 0.607 1e-09
170069411 277 conserved hypothetical protein [Culex qu 0.504 0.184 0.607 1e-09
157136524 261 hypothetical protein AaeL_AAEL013564 [Ae 0.504 0.195 0.607 3e-09
327267600 351 PREDICTED: coiled-coil domain-containing 0.504 0.145 0.588 1e-08
>gi|193647919|ref|XP_001952138.1| PREDICTED: coiled-coil domain-containing protein 109A-like [Acyrthosiphon pisum] Back     alignment and taxonomy information
 Score = 84.0 bits (206), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 39/102 (38%), Positives = 64/102 (62%), Gaps = 3/102 (2%)

Query: 3   EYYLPDVRDRQFLIHLHKRAKKVGFPLEQYNCLKNECGKLENDLARLRDPLIPPYRG--- 59
           EY +PDVRDRQ+LI +HK+A+K G  L  YN LK++   ++ DLARL+DPL+PP+R    
Sbjct: 292 EYLMPDVRDRQYLITVHKKARKSGLDLHTYNLLKDKMASVQTDLARLKDPLVPPHRAQVL 351

Query: 60  YEFQVPSDLSYKQPSSSINKFKEQIKMILSKQSHGANKNDTS 101
           Y+     + +  +P+   +  + +IK ++ +   G+ K  T+
Sbjct: 352 YDPLADCNATGMEPTGLWSGLRARIKSLMDETKGGSGKRTTN 393




Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|357615505|gb|EHJ69695.1| hypothetical protein KGM_13677 [Danaus plexippus] Back     alignment and taxonomy information
>gi|242008883|ref|XP_002425226.1| conserved hypothetical protein [Pediculus humanus corporis] gi|212508954|gb|EEB12488.1| conserved hypothetical protein [Pediculus humanus corporis] Back     alignment and taxonomy information
>gi|321471658|gb|EFX82630.1| hypothetical protein DAPPUDRAFT_302367 [Daphnia pulex] Back     alignment and taxonomy information
>gi|170052216|ref|XP_001862120.1| conserved hypothetical protein [Culex quinquefasciatus] gi|167873145|gb|EDS36528.1| conserved hypothetical protein [Culex quinquefasciatus] Back     alignment and taxonomy information
>gi|312374170|gb|EFR21790.1| hypothetical protein AND_16375 [Anopheles darlingi] Back     alignment and taxonomy information
>gi|158295687|ref|XP_316356.3| AGAP006330-PA [Anopheles gambiae str. PEST] gi|157016156|gb|EAA10820.3| AGAP006330-PA [Anopheles gambiae str. PEST] Back     alignment and taxonomy information
>gi|170069411|ref|XP_001869218.1| conserved hypothetical protein [Culex quinquefasciatus] gi|167865286|gb|EDS28669.1| conserved hypothetical protein [Culex quinquefasciatus] Back     alignment and taxonomy information
>gi|157136524|ref|XP_001663755.1| hypothetical protein AaeL_AAEL013564 [Aedes aegypti] gi|108869945|gb|EAT34170.1| AAEL013564-PA, partial [Aedes aegypti] Back     alignment and taxonomy information
>gi|327267600|ref|XP_003218587.1| PREDICTED: coiled-coil domain-containing protein 109A-like [Anolis carolinensis] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query101
UNIPROTKB|B3DL36339 mcu "LOC100170451 protein" [Xe 0.504 0.150 0.607 3e-10
UNIPROTKB|E1BWX3326 MCU "Uncharacterized protein" 0.504 0.156 0.588 5.7e-10
UNIPROTKB|F1MDL6277 MCU "Uncharacterized protein" 0.504 0.184 0.568 7.6e-10
UNIPROTKB|F1SU78289 MCU "Uncharacterized protein" 0.504 0.176 0.568 8.8e-10
MGI|MGI:3026965350 Mcu "mitochondrial calcium uni 0.504 0.145 0.568 1.5e-09
RGD|1589771350 Mcu "mitochondrial calcium uni 0.504 0.145 0.568 1.5e-09
UNIPROTKB|Q8NE86351 MCU "Calcium uniporter protein 0.504 0.145 0.568 1.5e-09
ZFIN|ZDB-GENE-061013-24376 mcu "mitochondrial calcium uni 0.504 0.135 0.529 3.6e-09
UNIPROTKB|B3DL36 mcu "LOC100170451 protein" [Xenopus (Silurana) tropicalis (taxid:8364)] Back     alignment and assigned GO terms
 Score = 151 (58.2 bits), Expect = 3.0e-10, P = 3.0e-10
 Identities = 31/51 (60%), Positives = 34/51 (66%)

Query:     3 EYYLPDVRDRQFLIHLHKRAKKVGFPLEQYNCLKNECGKLENDLARLRDPL 53
             EY  PD RDRQ+L   HK AKK  F LE+YN LKN   + E DL RLRDPL
Sbjct:   276 EYIYPDARDRQYLHFFHKGAKKTSFDLEEYNRLKNAITQAEVDLKRLRDPL 326




GO:0005262 "calcium channel activity" evidence=ISS
GO:0005743 "mitochondrial inner membrane" evidence=ISS
GO:0006851 "mitochondrial calcium ion transport" evidence=ISS
GO:0019722 "calcium-mediated signaling" evidence=ISS
GO:0035786 "protein complex oligomerization" evidence=ISS
GO:0051561 "elevation of mitochondrial calcium ion concentration" evidence=ISS
GO:0070588 "calcium ion transmembrane transport" evidence=ISS
UNIPROTKB|E1BWX3 MCU "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|F1MDL6 MCU "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|F1SU78 MCU "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
MGI|MGI:3026965 Mcu "mitochondrial calcium uniporter" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
RGD|1589771 Mcu "mitochondrial calcium uniporter" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|Q8NE86 MCU "Calcium uniporter protein, mitochondrial" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-061013-24 mcu "mitochondrial calcium uniporter" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q8NE86MCU_HUMANNo assigned EC number0.56860.50490.1452yesN/A
Q08BI9MCU_DANRENo assigned EC number0.52940.50490.1356yesN/A
Q3UMR5MCU_MOUSENo assigned EC number0.56860.50490.1457yesN/A

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query101
pfam04678180 pfam04678, DUF607, Protein of unknown function, DU 2e-04
>gnl|CDD|218209 pfam04678, DUF607, Protein of unknown function, DUF607 Back     alignment and domain information
 Score = 38.1 bits (89), Expect = 2e-04
 Identities = 12/34 (35%), Positives = 14/34 (41%)

Query: 3   EYYLPDVRDRQFLIHLHKRAKKVGFPLEQYNCLK 36
           E       DR F     K  K+ GF LE+Y  L 
Sbjct: 147 EPSYEAADDRLFSARQKKLYKRKGFDLERYEELV 180


This family represents a conserved region found in several uncharacterized eukaryotic proteins. Length = 180

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 101
KOG2966|consensus325 99.5
PF04678180 DUF607: Protein of unknown function, DUF607; Inter 98.49
>KOG2966|consensus Back     alignment and domain information
Probab=99.50  E-value=7.7e-15  Score=120.25  Aligned_cols=58  Identities=34%  Similarity=0.446  Sum_probs=56.2

Q ss_pred             cccCcchhhHHHHHHHHHhhhhccCCChhhhhhhhhHHHHHHHHHHhhhCCCCCCCCCccccccC
Q psy16466          2 MEYYLPDVRDRQFLIHLHKRAKKVGFPLEQYNCLKNECGKLENDLARLRDPLIPPYRGYEFQVPS   66 (101)
Q Consensus         2 QdY~Yp~ardRq~L~~FHK~Akk~~FDVe~YN~LKeelA~vEedLkRLRdPL~l~~~~~~~~~p~   66 (101)
                      |||+||.+++|+|+.+|||.+++++|||++||+||+..+....+++|.|||+.       +|+|.
T Consensus       261 qepsy~~~~~r~f~~kq~Kl~k~~~FDierYneLk~~~~~~~~~~~~~~~~l~-------~~~~v  318 (325)
T KOG2966|consen  261 QEPSYEGFYKRRFLTKQRKLMKKQDFDIERYNELKKLFAPAPCSLKRCRDPLF-------QHLPV  318 (325)
T ss_pred             cCcccHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHhhCccccccccccHH-------hcCch
Confidence            89999999999999999999999999999999999999999999999999999       77776



>PF04678 DUF607: Protein of unknown function, DUF607; InterPro: IPR006769 This entry represents the C-terminal domain of coiled-coil domain containing protein 109 Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00