Psyllid ID: psy17213


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------7
METADVCIGTSVGTITEPECLGPCEPGTSVTLEGIVWHETEGTSVTLEGIVWHETEGKGISQSLFILLN
cccEEEEEEEcEEEEcccccccccccccEEEEEEEEEEEcccEEEEEEEEEEEEcccccEEEEEEEEEc
cccEEEEEccEEEEEcccHcccccccccEEEEEEEEEEEcccccEEEEEEEEEccccccccHHHHHHcc
metadvcigtsvgtitepeclgpcepgtsvtlEGIVwhetegtsvtLEGIVWhetegkgisQSLFILLN
metadvcigtsvgtitepeclgpcEPGTSVTLEGIVWHETEGTSVTLEGIVWhetegkgisqslfilln
METADVCIGTSVGTITEPECLGPCEPGTSVTLEGIVWHETEGTSVTLEGIVWHETEGKGISQSLFILLN
*****VCIGTSVGTITEPECLGPCEPGTSVTLEGIVWHETEGTSVTLEGIVWHETEGKGISQSLFIL**
*******IGTSVGTITEPECLGPCEPGTSVTLEGIVWHETEGTSVTLEGIVWHETEGKGISQSLFILLN
METADVCIGTSVGTITEPECLGPCEPGTSVTLEGIVWHETEGTSVTLEGIVWHETEGKGISQSLFILLN
*ETADVCIGTSVGTITEPECLGPCEPGTSVTLEGIVWHETEGTSVTLEGIVWHETEGKGISQSLFILLN
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiii
ooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiii
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
METADVCIGTSVGTITEPECLGPCEPGTSVTLEGIVWHETEGTSVTLEGIVWHETEGKGISQSLFILLN
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query69 2.2.26 [Sep-21-2011]
Q9ULD9 1512 Zinc finger protein 608 O yes N/A 0.579 0.026 0.707 2e-11
Q56A10 1511 Zinc finger protein 608 O yes N/A 0.579 0.026 0.707 3e-11
O15014 1411 Zinc finger protein 609 O no N/A 0.434 0.021 0.833 1e-08
Q8BZ47 1413 Zinc finger protein 609 O no N/A 0.434 0.021 0.833 1e-08
>sp|Q9ULD9|ZN608_HUMAN Zinc finger protein 608 OS=Homo sapiens GN=ZNF608 PE=1 SV=4 Back     alignment and function desciption
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 29/41 (70%), Positives = 32/41 (78%), Gaps = 1/41 (2%)

Query: 12  VGTITEPECLGPCEPGTSVTLEGIVWHETEGTSVTLEGIVW 52
           VG +TEPECLGPCEPGTSV LEGIVWHETE   V +  + W
Sbjct: 357 VGVVTEPECLGPCEPGTSVNLEGIVWHETE-EGVLVVNVTW 396





Homo sapiens (taxid: 9606)
>sp|Q56A10|ZN608_MOUSE Zinc finger protein 608 OS=Mus musculus GN=Znf608 PE=2 SV=1 Back     alignment and function description
>sp|O15014|ZN609_HUMAN Zinc finger protein 609 OS=Homo sapiens GN=ZNF609 PE=1 SV=2 Back     alignment and function description
>sp|Q8BZ47|ZN609_MOUSE Zinc finger protein 609 OS=Mus musculus GN=Znf609 PE=1 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query69
270010261 1135 hypothetical protein TcasGA2_TC009640 [T 0.695 0.042 0.854 6e-18
91086295 1220 PREDICTED: similar to AGAP005030-PA [Tri 0.724 0.040 0.784 1e-16
307199720 1196 Zinc finger protein 609 [Harpegnathos sa 0.724 0.041 0.764 2e-16
383863863 1528 PREDICTED: uncharacterized protein LOC10 0.724 0.032 0.764 2e-16
380025161 2015 PREDICTED: uncharacterized protein LOC10 0.724 0.024 0.764 2e-16
328791157 1903 PREDICTED: hypothetical protein LOC40972 0.724 0.026 0.764 3e-16
340714213 1838 PREDICTED: hypothetical protein LOC10064 0.724 0.027 0.764 4e-16
195120578 2432 GI19393 [Drosophila mojavensis] gi|19390 0.724 0.020 0.745 1e-15
195455552 2405 GK23239 [Drosophila willistoni] gi|19417 0.724 0.020 0.764 1e-15
195384601 2402 GJ22456 [Drosophila virilis] gi|19414580 0.724 0.020 0.745 1e-15
>gi|270010261|gb|EFA06709.1| hypothetical protein TcasGA2_TC009640 [Tribolium castaneum] Back     alignment and taxonomy information
 Score = 94.7 bits (234), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 41/48 (85%), Positives = 44/48 (91%)

Query: 2   ETADVCIGTSVGTITEPECLGPCEPGTSVTLEGIVWHETEGTSVTLEG 49
           E +DVCIGTSVGTITEP+CLGPCEPGTSVTLEGIVWHETEG +VT  G
Sbjct: 216 EVSDVCIGTSVGTITEPDCLGPCEPGTSVTLEGIVWHETEGVNVTWRG 263




Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|91086295|ref|XP_973606.1| PREDICTED: similar to AGAP005030-PA [Tribolium castaneum] Back     alignment and taxonomy information
>gi|307199720|gb|EFN80199.1| Zinc finger protein 609 [Harpegnathos saltator] Back     alignment and taxonomy information
>gi|383863863|ref|XP_003707399.1| PREDICTED: uncharacterized protein LOC100875056 [Megachile rotundata] Back     alignment and taxonomy information
>gi|380025161|ref|XP_003696347.1| PREDICTED: uncharacterized protein LOC100871781 [Apis florea] Back     alignment and taxonomy information
>gi|328791157|ref|XP_393227.4| PREDICTED: hypothetical protein LOC409729 [Apis mellifera] Back     alignment and taxonomy information
>gi|340714213|ref|XP_003395625.1| PREDICTED: hypothetical protein LOC100648629 [Bombus terrestris] Back     alignment and taxonomy information
>gi|195120578|ref|XP_002004801.1| GI19393 [Drosophila mojavensis] gi|193909869|gb|EDW08736.1| GI19393 [Drosophila mojavensis] Back     alignment and taxonomy information
>gi|195455552|ref|XP_002074771.1| GK23239 [Drosophila willistoni] gi|194170856|gb|EDW85757.1| GK23239 [Drosophila willistoni] Back     alignment and taxonomy information
>gi|195384601|ref|XP_002051003.1| GJ22456 [Drosophila virilis] gi|194145800|gb|EDW62196.1| GJ22456 [Drosophila virilis] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query69
FB|FBgn0010575 2312 sbb "scribbler" [Drosophila me 0.724 0.021 0.764 2.2e-16
UNIPROTKB|B3KPE6 707 ZNF608 "Zinc finger protein 60 0.739 0.072 0.603 1.3e-11
UNIPROTKB|F1P217 1234 ZNF608 "Uncharacterized protei 0.739 0.041 0.603 2.7e-11
MGI|MGI:2442338 1511 Zfp608 "zinc finger protein 60 0.739 0.033 0.603 3.5e-11
UNIPROTKB|F1N312 1512 ZNF608 "Uncharacterized protei 0.739 0.033 0.603 3.5e-11
UNIPROTKB|Q9ULD9 1512 ZNF608 "Zinc finger protein 60 0.739 0.033 0.603 3.5e-11
UNIPROTKB|F1RKM6 1512 ZNF608 "Uncharacterized protei 0.739 0.033 0.603 3.5e-11
UNIPROTKB|E2RQD7 1516 ZNF608 "Uncharacterized protei 0.739 0.033 0.603 4.5e-11
ZFIN|ZDB-GENE-030131-6219 1399 zgc:162740 "zgc:162740" [Danio 0.739 0.036 0.566 1.3e-09
ZFIN|ZDB-GENE-030131-5095 1377 znf609 "zinc finger protein 60 0.739 0.037 0.566 1.6e-09
FB|FBgn0010575 sbb "scribbler" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 220 (82.5 bits), Expect = 2.2e-16, P = 2.2e-16
 Identities = 39/51 (76%), Positives = 43/51 (84%)

Query:     2 ETADVCIGTSVGTITEPECLGPCEPGTSVTLEGIVWHETEGTSVTLEGIVW 52
             E  D+CIGTSVGTITEP+CLGPCEPGTSVTLEGIVWHETEG  V +  + W
Sbjct:   869 EMVDICIGTSVGTITEPDCLGPCEPGTSVTLEGIVWHETEG-GVLVVNVTW 918




GO:0005634 "nucleus" evidence=NAS;IDA
GO:0007412 "axon target recognition" evidence=IMP
GO:0007411 "axon guidance" evidence=NAS;IMP
GO:0008345 "larval locomotory behavior" evidence=IMP;TAS
GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=NAS;IMP
GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=NAS
GO:0042461 "photoreceptor cell development" evidence=NAS
GO:0008270 "zinc ion binding" evidence=IEA
GO:0007476 "imaginal disc-derived wing morphogenesis" evidence=IMP
GO:0045570 "regulation of imaginal disc growth" evidence=IMP
GO:0045879 "negative regulation of smoothened signaling pathway" evidence=IMP
GO:0003714 "transcription corepressor activity" evidence=IDA
GO:0048190 "wing disc dorsal/ventral pattern formation" evidence=IGI
UNIPROTKB|B3KPE6 ZNF608 "Zinc finger protein 608" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|F1P217 ZNF608 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
MGI|MGI:2442338 Zfp608 "zinc finger protein 608" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|F1N312 ZNF608 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|Q9ULD9 ZNF608 "Zinc finger protein 608" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|F1RKM6 ZNF608 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|E2RQD7 ZNF608 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-030131-6219 zgc:162740 "zgc:162740" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-030131-5095 znf609 "zinc finger protein 609" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q56A10ZN608_MOUSENo assigned EC number0.70730.57970.0264yesN/A
Q9ULD9ZN608_HUMANNo assigned EC number0.70730.57970.0264yesN/A

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00