Psyllid ID: psy17547

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180------
Protein Sequence
YCDCFANGEFCYQCNCNSCFNNIEHEDDRHHAIRQCLERNPNAFRPKIGKCLVGEGERRHTKGCNCKRSGCLKNYCECYEAGARTLEPNGIRPRKPCNCTKSMCLKLYCDCFANGEFCYQCNCNSCFNNIEHEDDRHHAIRQCLERNPNAFRPKIGKCLVGEGERRHTKGCNCKRSGCLKNYCECY
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccHHHHHcccccccccccccccccccccccccHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccHHccccccccccccccccccHHHHHHHHHHHHHHHHHccHHccccccccccccccccccccccccccHHHHHHHHHHHccccccccccccccccccccccHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHccHHcccccccccccccccHccccccccccHHHHHccEcc
Coil and Loop (DISEMBL)
ycdcfangefcyqcncnscfnnieheddRHHAIRQCLernpnafrpkigkclvgegerrhtkgcnckrsgclknyCECYEAGartlepngirprkpcnctksmclklycdcfangefcyqcncnscfnnieheddRHHAIRQCLernpnafrpkigkclvgegerrhtkgcnckrsgclknycecy
Flexible Loop (DISEMBL)
YCDCFANGEFCYQCNCNSCFNNIEHEDDRHHAIRQClernpnafrpkigkclvgegerrhtkgcnckrsgclKNYCECYEAGartlepngirprkPCNCTKSMCLKLYCDCFANGEFCYQCNCNSCFNNIEHEDDRHHAIRQClernpnafrpkigkclvgegerrhtkgcnckrsgclknycecy
Low Complexity Region (SEG)
YCDCFANGEFCYQCNCNSCFNNIEHEDDRHHAIRQCLERNPNAFRPKIGKCLVGEGERRHTKGCNCKRSGCLKNYCECYEAGARTLEPNGIRPRKPCNCTKSMCLKLYCDCFANGEFCYQCNCNSCFNNIEHEDDRHHAIRQCLERNPNAFRPKIGKCLVGEGERRHTKGCNCKRSGCLKNYCECY
Disordered region (IsUnstruct)
*CDCFANGEFCYQCNCNSCFNNIEHEDDRHHAIRQCLERNPNAFRPKIGKCLVGEGERRHTKGCNCKRSGCLKNYCECYEAGARTLEPNGIRPRKPCNCTKSMCLKLYCDCFANGEFCYQCNCNSCFNNIEHEDDRHHAIRQCLERNPNAFRPKIGKCLVGEGERRHTKGCNCKRSGCLKNYCEC*
Disordered Region (DISOPRED)
YCDCFANGEFCYQCNCNSCFNNIEHEDDRHHAIRQC*****************************************************************SMCLKLYCDCFANGEFCYQCNCNSCFNNIEHEDDRHHAI******************************CNCKRSGCLKNYCECY
Disordered Region (DISEMBL)
YCDCFANGEFCYQCNCNSCFNNIEHEDDRHHAIRQCLERNPNAFRPKIGKCLVGEGERRHTKGCNCKRSGCLKNYCECYEAGARTLEPNGIRPRKPCNCTKSMCLKLYCDCFANGEFCYQCNCNSCFNNIEHEDDRHHAIRQCLERNPNAFRPKIGKCLVGEGERRHTKGCNCKRSGCLKNYCECY
Disordered Region (DISPRO)
YCDCFANGEFCYQCNCNSCFNNIEHEDDRHHAIRQCLERNPNAFRPKIG*************GCNCKRSGCLKNYCECYEAGARTLEPNGIRPRKPCNCTKSMCLKLYCDCFANGEFCYQCNCNSCFNNIEHEDDRHHAIRQCLERNPNAFRPKIGK************GCNCKRSGCLKNYCECY
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
YCDCFANGEFCYQCNCNSCFNNIEHEDDRHHAIRQCLERNPNAFRPKIGKCLVGEGERRHTKGCNCKRSGCLKNYCECYEAGARTLEPNGIRPRKPCNCTKSMCLKLYCDCFANGEFCYQCNCNSCFNNIEHEDDRHHAIRQCLERNPNAFRPKIGKCLVGEGERRHTKGCNCKRSGCLKNYCECY
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	186	2.2.26 [Sep-21-2011]
Q6MZP7	749	Protein lin-54 homolog OS	yes	N/A	0.279	0.069	0.768	2e-39
Q641Z1	749	Protein lin-54 homolog OS	yes	N/A	0.279	0.069	0.768	2e-39
Q571G4	749	Protein lin-54 homolog OS	yes	N/A	0.279	0.069	0.768	2e-39
Q0IHV2	741	Protein lin-54 homolog OS	yes	N/A	0.279	0.070	0.768	4e-39
A1Z9E2	950	Protein lin-54 homolog OS	yes	N/A	0.494	0.096	0.688	6e-37
Q08CM4	771	Protein lin-54 homolog OS	yes	N/A	0.559	0.134	0.714	2e-36
Q5RBN8	528	Protein lin-54 homolog OS	yes	N/A	0.510	0.179	0.768	2e-35
Q95QD7	435	Protein lin-54 OS=Caenorh	yes	N/A	0.5	0.213	0.715	5e-33
Q5XHX9	475	Tesmin OS=Rattus norvegic	no	N/A	0.413	0.162	0.629	5e-24
Q9SL70	571	Protein tesmin/TSO1-like	yes	N/A	0.5	0.162	0.538	5e-24

>sp|Q6MZP7|LIN54_HUMAN Protein lin-54 homolog OS=Homo sapiens GN=LIN54 PE=1 SV=3

 Score =  162 bits (409), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 73/95 (76%), Positives = 84/95 (88%)

Query: 92  RPRKPCNCTKSMCLKLYCDCFANGEFCYQCNCNSCFNNIEHEDDRHHAIRQCLERNPNAF 151
           RPRKPCNCTKS+CLKLYCDCFANGEFC  CNC +C+NN+EHE++R  AI+ CL+RNP AF
Sbjct: 520 RPRKPCNCTKSLCLKLYCDCFANGEFCNNCNCTNCYNNLEHENERQKAIKACLDRNPEAF 579

Query: 152 RPKIGKCLVGEGERRHTKGCNCKRSGCLKNYCECY 186
           +PKIGK   GE +RRH+KGCNCKRSGCLKNYCECY
Sbjct: 580 KPKIGKGKEGESDRRHSKGCNCKRSGCLKNYCECY 614

Component of the DREAM complex, a multiprotein complex that can both act as a transcription activator or repressor depending on the context. In G0 phase, the complex binds to more than 800 promoters and is required for repression of E2F target genes. In S phase, the complex selectively binds to the promoters of G2/M genes whose products are required for mitosis and participates in their cell cycle dependent activation. In the complex, acts as a DNA-binding protein that binds the promoter of CDK1 in a sequence-specific manner.
Homo sapiens (taxid: 9606)

>sp|Q641Z1|LIN54_RAT Protein lin-54 homolog OS=Rattus norvegicus GN=Lin54 PE=2 SV=2

 Score =  162 bits (409), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 73/95 (76%), Positives = 84/95 (88%)

Query: 92  RPRKPCNCTKSMCLKLYCDCFANGEFCYQCNCNSCFNNIEHEDDRHHAIRQCLERNPNAF 151
           RPRKPCNCTKS+CLKLYCDCFANGEFC  CNC +C+NN+EHE++R  AI+ CL+RNP AF
Sbjct: 520 RPRKPCNCTKSLCLKLYCDCFANGEFCNNCNCTNCYNNLEHENERQKAIKACLDRNPEAF 579

Query: 152 RPKIGKCLVGEGERRHTKGCNCKRSGCLKNYCECY 186
           +PKIGK   GE +RRH+KGCNCKRSGCLKNYCECY
Sbjct: 580 KPKIGKGKEGESDRRHSKGCNCKRSGCLKNYCECY 614

Component of the DREAM complex, a multiprotein complex that can both act as a transcription activator or repressor depending on the context. In G0 phase, the complex binds to more than 800 promoters and is required for repression of E2F target genes. In S phase, the complex selectively binds to the promoters of G2/M genes whose products are required for mitosis and participates in their cell cycle dependent activation. In the complex, acts as a DNA-binding protein that binds the promoter of CDK1 in a sequence-specific manner.

Rattus norvegicus (taxid: 10116)

>sp|Q571G4|LIN54_MOUSE Protein lin-54 homolog OS=Mus musculus GN=Lin54 PE=2 SV=2

 Score =  162 bits (409), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 73/95 (76%), Positives = 84/95 (88%)

Query: 92  RPRKPCNCTKSMCLKLYCDCFANGEFCYQCNCNSCFNNIEHEDDRHHAIRQCLERNPNAF 151
           RPRKPCNCTKS+CLKLYCDCFANGEFC  CNC +C+NN+EHE++R  AI+ CL+RNP AF
Sbjct: 520 RPRKPCNCTKSLCLKLYCDCFANGEFCNNCNCTNCYNNLEHENERQKAIKACLDRNPEAF 579

Query: 152 RPKIGKCLVGEGERRHTKGCNCKRSGCLKNYCECY 186
           +PKIGK   GE +RRH+KGCNCKRSGCLKNYCECY
Sbjct: 580 KPKIGKGKEGESDRRHSKGCNCKRSGCLKNYCECY 614

Component of the DREAM complex, a multiprotein complex that can both act as a transcription activator or repressor depending on the context. In G0 phase, the complex binds to more than 800 promoters and is required for repression of E2F target genes. In S phase, the complex selectively binds to the promoters of G2/M genes whose products are required for mitosis and participates in their cell cycle dependent activation. In the complex, acts as a DNA-binding protein that binds the promoter of CDK1 in a sequence-specific manner.

Mus musculus (taxid: 10090)

>sp|Q0IHV2|LIN54_XENTR Protein lin-54 homolog OS=Xenopus tropicalis GN=lin54 PE=2 SV=1

 Score =  160 bits (405), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 73/95 (76%), Positives = 84/95 (88%)

Query: 92  RPRKPCNCTKSMCLKLYCDCFANGEFCYQCNCNSCFNNIEHEDDRHHAIRQCLERNPNAF 151
           RPRKPCNCTKS+CLKLYCDCFANGEFC  CNC +C+NN+EHE++R  AI+ CL+RNP AF
Sbjct: 512 RPRKPCNCTKSLCLKLYCDCFANGEFCNNCNCTNCYNNLEHENERQKAIKACLDRNPEAF 571

Query: 152 RPKIGKCLVGEGERRHTKGCNCKRSGCLKNYCECY 186
           +PKIGK   GE +RRH+KGCNCKRSGCLKNYCECY
Sbjct: 572 KPKIGKGKEGESDRRHSKGCNCKRSGCLKNYCECY 606

Component of the DREAM complex, a multiprotein complex that can both act as a transcription activator or repressor depending on the context.

Xenopus tropicalis (taxid: 8364)

>sp|A1Z9E2|LIN54_DROME Protein lin-54 homolog OS=Drosophila melanogaster GN=mip120 PE=1 SV=1

 Score =  153 bits (387), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 64/93 (68%), Positives = 73/93 (78%), Gaps = 1/93 (1%)

Query: 94  RKPCNCTKSMCLKLYCDCFANGEFCYQCNCNSCFNNIEHEDDRHHAIRQCLERNPNAFRP 153
           RK CNC+KS CLKLYCDCFANGEFC  C C  CFNN+++E +R  AIR CL+RNP+AF+P
Sbjct: 738 RKHCNCSKSQCLKLYCDCFANGEFCQDCTCKDCFNNLDYEVERERAIRSCLDRNPSAFKP 797

Query: 154 KIGKCLVGEGERRHTKGCNCKRSGCLKNYCECY 186
           KI     G+  R H KGCNCKRSGCLKNYCECY
Sbjct: 798 KITAPNSGD-MRLHNKGCNCKRSGCLKNYCECY 829

Component of the DREAM complex, a multiprotein complex that can both act as a transcription activator or repressor depending on the context. In follicle cells, the complex plays a central role in the site-specific DNA replication at the chorion loci. During development, the complex represses transcription of developmentally controlled E2F target genes.

Drosophila melanogaster (taxid: 7227)

>sp|Q08CM4|LIN54_DANRE Protein lin-54 homolog OS=Danio rerio GN=lin54 PE=1 SV=1

 Score =  152 bits (383), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 75/105 (71%), Positives = 86/105 (81%), Gaps = 1/105 (0%)

Query: 82  GARTLEPNGIRPRKPCNCTKSMCLKLYCDCFANGEFCYQCNCNSCFNNIEHEDDRHHAIR 141
           G  T E N  RPRKPCNCT+S CLKLYCDCFANGEFC  CNC +CFNN++HE +R  AI+
Sbjct: 534 GLSTSEANS-RPRKPCNCTRSQCLKLYCDCFANGEFCNNCNCVNCFNNLDHESERLKAIK 592

Query: 142 QCLERNPNAFRPKIGKCLVGEGERRHTKGCNCKRSGCLKNYCECY 186
            CL+RNP AF+PKIGK   GE +RRH+KGCNCK+SGCLKNYCECY
Sbjct: 593 ACLDRNPVAFKPKIGKGKEGESDRRHSKGCNCKKSGCLKNYCECY 637

Component of the DREAM complex, a multiprotein complex that can both act as a transcription activator or repressor depending on the context.

Danio rerio (taxid: 7955)

>sp|Q5RBN8|LIN54_PONAB Protein lin-54 homolog OS=Pongo abelii GN=LIN54 PE=2 SV=1

 Score =  148 bits (373), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 73/95 (76%), Positives = 84/95 (88%)

Query: 92  RPRKPCNCTKSMCLKLYCDCFANGEFCYQCNCNSCFNNIEHEDDRHHAIRQCLERNPNAF 151
           RPRKPCNCTKS+CLKLYCDCFANGEFC  CNC +C+NN+EHE++R  AI+ CL+RNP AF
Sbjct: 299 RPRKPCNCTKSLCLKLYCDCFANGEFCNNCNCTNCYNNLEHENERQKAIKACLDRNPEAF 358

Query: 152 RPKIGKCLVGEGERRHTKGCNCKRSGCLKNYCECY 186
           +PKIGK   GE +RRH+KGCNCKRSGCLKNYCECY
Sbjct: 359 KPKIGKGKEGESDRRHSKGCNCKRSGCLKNYCECY 393

Component of the DREAM complex, a multiprotein complex that can both act as a transcription activator or repressor depending on the context. In G0 phase, the complex binds to more than 800 promoters and is required for repression of E2F target genes. In S phase, the complex selectively binds to the promoters of G2/M genes whose products are required for mitosis and participates in their cell cycle dependent activation. In the complex, acts as a DNA-binding protein that binds the promoter of CDK1 in a sequence-specific manner.

Pongo abelii (taxid: 9601)

>sp|Q95QD7|LIN54_CAEEL Protein lin-54 OS=Caenorhabditis elegans GN=lin-54 PE=1 SV=1

 Score =  140 bits (353), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 68/95 (71%), Positives = 75/95 (78%), Gaps = 2/95 (2%)

Query: 94  RKPCNCTKSMCLKLYCDCFANGEFCYQCNCNSCFNNIEHEDDRHHAIRQCLERNPNAFRP 153
           RKPCNCTKS CLKLYCDCFANGEFC  CNC  C NNIE++  R  AIRQ LERNPNAF+P
Sbjct: 174 RKPCNCTKSQCLKLYCDCFANGEFCRDCNCKDCHNNIEYDSQRSKAIRQSLERNPNAFKP 233

Query: 154 KIGKCL--VGEGERRHTKGCNCKRSGCLKNYCECY 186
           KIG     + + ER H KGC+CK+SGCLKNYCECY
Sbjct: 234 KIGIARGGITDIERLHQKGCHCKKSGCLKNYCECY 268

Synthetic multivulva class B (synMuvB) protein. SynMuvB proteins are required to repress the induction of vulval development by Ras signaling and probably act by forming the multiprotein DRM complex that repress transcription.

Caenorhabditis elegans (taxid: 6239)

>sp|Q5XHX9|MTL5_RAT Tesmin OS=Rattus norvegicus GN=Mtl5 PE=2 SV=2

 Score =  110 bits (275), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 51/81 (62%), Positives = 64/81 (79%), Gaps = 4/81 (4%)

Query: 1   YCDCFANGEFCYQCNCNSCFNNIEHEDDRHHAIRQCLERNPNAFRPKIGKCLVGEGERRH 60
           YCDCF++G+FC  C+CN    N+ HE +R  AI+ CL+RNP AF+PK+GK  +G  + RH
Sbjct: 278 YCDCFSSGDFCNSCSCN----NLRHELERFKAIKACLDRNPEAFQPKMGKGRLGAAKLRH 333

Query: 61  TKGCNCKRSGCLKNYCECYEA 81
           +KGCNCKRSGCLKNYCECYEA
Sbjct: 334 SKGCNCKRSGCLKNYCECYEA 354

May have a role in spermatogenesis.

Rattus norvegicus (taxid: 10116)

>sp|Q9SL70|TCX6_ARATH Protein tesmin/TSO1-like CXC 6 OS=Arabidopsis thaliana GN=TCX6 PE=1 SV=1

 Score =  110 bits (275), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 56/104 (53%), Positives = 68/104 (65%), Gaps = 11/104 (10%)

Query: 94  RKPCNCTKSMCLKLYCDCFANGEFCYQCNCNSCFNNIEHEDDRHHAIRQCLERNPNAFRP 153
           +K CNC  S CLKLYC+CFA+G +C  CNC +CFNN+E+E  R  A+   LERNPNAFRP
Sbjct: 118 KKQCNCKHSRCLKLYCECFASGTYCDGCNCVNCFNNVENEPARRQAVESTLERNPNAFRP 177

Query: 154 KIGKCLVGEGE-----------RRHTKGCNCKRSGCLKNYCECY 186
           KI     G  +            RH KGC+CK+SGCLK YCEC+
Sbjct: 178 KIAASPHGGRDNREEVGDVVMLARHNKGCHCKKSGCLKKYCECF 221

Plays a role in development of both male and female reproductive tissues (By similarity).

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	186
91088685	695	PREDICTED: similar to Lin54 protein [Tri	0.543	0.145	0.788	9e-47
270011672	752	hypothetical protein TcasGA2_TC005724 [T	0.543	0.134	0.788	6e-46
328722237	750	PREDICTED: protein lin-54 homolog [Acyrt	0.505	0.125	0.789	3e-43
427785019	916	Putative dna-dependent [Rhipicephalus pu	0.510	0.103	0.831	4e-40
307182142	822	Protein lin-54-like protein [Camponotus	0.548	0.124	0.776	6e-40
322788388	834	hypothetical protein SINV_04654 [Solenop	0.543	0.121	0.784	6e-40
328785527	804	PREDICTED: protein lin-54 homolog isofor	0.548	0.126	0.766	1e-39
383858991	802	PREDICTED: protein lin-54 homolog isofor	0.548	0.127	0.766	1e-39
332021648	859	Protein lin-54-like protein [Acromyrmex	0.543	0.117	0.784	1e-39
340722922	835	PREDICTED: protein lin-54 homolog isofor	0.548	0.122	0.766	1e-39

>gi|91088685|ref|XP_974962.1| PREDICTED: similar to Lin54 protein [Tribolium castaneum]

 Score =  191 bits (486), Expect = 9e-47,   Method: Composition-based stats.
 Identities = 82/104 (78%), Positives = 88/104 (84%), Gaps = 3/104 (2%)

Query: 86  LEPNGIRPRKPCNCTKSMCLKLYCDCFANGEFCYQCNCNSCFNNIEHEDDRHHAIRQCLE 145
           LE NGIRPRKPCNCTKS CLKLYCDCFANGEFCY CNC +CFNN+E+ED R  AI+ CLE
Sbjct: 474 LESNGIRPRKPCNCTKSQCLKLYCDCFANGEFCYMCNCMNCFNNLENEDHRQRAIKTCLE 533

Query: 146 RNPNAFRPKIGKCLVGEGE---RRHTKGCNCKRSGCLKNYCECY 186
           RNPNAFRPKIGK     G+   R+HTKGCNCKRSGCLKNYCECY
Sbjct: 534 RNPNAFRPKIGKAKDVAGDSSIRKHTKGCNCKRSGCLKNYCECY 577

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|270011672|gb|EFA08120.1| hypothetical protein TcasGA2_TC005724 [Tribolium castaneum]

 Score =  189 bits (479), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 82/104 (78%), Positives = 88/104 (84%), Gaps = 3/104 (2%)

Query: 86  LEPNGIRPRKPCNCTKSMCLKLYCDCFANGEFCYQCNCNSCFNNIEHEDDRHHAIRQCLE 145
           LE NGIRPRKPCNCTKS CLKLYCDCFANGEFCY CNC +CFNN+E+ED R  AI+ CLE
Sbjct: 531 LESNGIRPRKPCNCTKSQCLKLYCDCFANGEFCYMCNCMNCFNNLENEDHRQRAIKTCLE 590

Query: 146 RNPNAFRPKIGKCLVGEGE---RRHTKGCNCKRSGCLKNYCECY 186
           RNPNAFRPKIGK     G+   R+HTKGCNCKRSGCLKNYCECY
Sbjct: 591 RNPNAFRPKIGKAKDVAGDSSIRKHTKGCNCKRSGCLKNYCECY 634

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328722237|ref|XP_001950656.2| PREDICTED: protein lin-54 homolog [Acyrthosiphon pisum]

 Score =  179 bits (455), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 75/95 (78%), Positives = 85/95 (89%), Gaps = 1/95 (1%)

Query: 92  RPRKPCNCTKSMCLKLYCDCFANGEFCYQCNCNSCFNNIEHEDDRHHAIRQCLERNPNAF 151
           + +KPCNCT+S CLKLYCDCFANGEFCYQCNCNSC+NN+EHE+DR  AIR  L+RNPNAF
Sbjct: 535 KTKKPCNCTRSQCLKLYCDCFANGEFCYQCNCNSCYNNMEHEEDRAQAIRSVLDRNPNAF 594

Query: 152 RPKIGKCLVGEGERRHTKGCNCKRSGCLKNYCECY 186
           RPKI K  VG+ ER+HTKGCNCKRSGCLKNYCEC+
Sbjct: 595 RPKI-KSFVGQAERQHTKGCNCKRSGCLKNYCECF 628

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|427785019|gb|JAA57961.1| Putative dna-dependent [Rhipicephalus pulchellus]

 Score =  169 bits (429), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 79/95 (83%), Positives = 85/95 (89%)

Query: 92  RPRKPCNCTKSMCLKLYCDCFANGEFCYQCNCNSCFNNIEHEDDRHHAIRQCLERNPNAF 151
           RPRKPCNCTKS CLKLYCDCFANGEFC+ CNCN+CFNN+EHE++R  AI  CLERNPNAF
Sbjct: 661 RPRKPCNCTKSQCLKLYCDCFANGEFCHSCNCNNCFNNLEHEEERQKAIGACLERNPNAF 720

Query: 152 RPKIGKCLVGEGERRHTKGCNCKRSGCLKNYCECY 186
           RPKIGK   G+ ERRHTKGCNCKRSGCLKNYCECY
Sbjct: 721 RPKIGKGKEGDHERRHTKGCNCKRSGCLKNYCECY 755

Source: Rhipicephalus pulchellus

Species: Rhipicephalus pulchellus

Genus: Rhipicephalus

Family: Ixodidae

Order: Ixodida

Class: Arachnida

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307182142|gb|EFN69485.1| Protein lin-54-like protein [Camponotus floridanus]

 Score =  169 bits (427), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 80/103 (77%), Positives = 89/103 (86%), Gaps = 1/103 (0%)

Query: 85  TLEPNGIRPRKPCNCTKSMCLKLYCDCFANGEFCYQCNCNSCFNNIEHEDDRHHAIRQCL 144
           T+EPNGIRPRKPCNCTKS CLKLYCDCFANGEFC+ CNCN+C NN+ +E++R  AI+ CL
Sbjct: 593 TVEPNGIRPRKPCNCTKSQCLKLYCDCFANGEFCHMCNCNNCSNNLGNEEERQRAIKSCL 652

Query: 145 ERNPNAFRPKIGKCL-VGEGERRHTKGCNCKRSGCLKNYCECY 186
           ERNPNAFRPKIGK    G+  RRH KGCNCKRSGCLKNYCECY
Sbjct: 653 ERNPNAFRPKIGKGRETGDDIRRHNKGCNCKRSGCLKNYCECY 695

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|322788388|gb|EFZ14059.1| hypothetical protein SINV_04654 [Solenopsis invicta]

 Score =  169 bits (427), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 80/102 (78%), Positives = 88/102 (86%), Gaps = 1/102 (0%)

Query: 86  LEPNGIRPRKPCNCTKSMCLKLYCDCFANGEFCYQCNCNSCFNNIEHEDDRHHAIRQCLE 145
           +EPNGIRPRKPCNCTKS CLKLYCDCFANGEFC+ CNCN+C NN+ +E++R  AI+ CLE
Sbjct: 606 VEPNGIRPRKPCNCTKSQCLKLYCDCFANGEFCHMCNCNNCSNNLGNEEERQRAIKSCLE 665

Query: 146 RNPNAFRPKIGKCL-VGEGERRHTKGCNCKRSGCLKNYCECY 186
           RNPNAFRPKIGK    GE  RRH KGCNCKRSGCLKNYCECY
Sbjct: 666 RNPNAFRPKIGKGRETGEDIRRHNKGCNCKRSGCLKNYCECY 707

Source: Solenopsis invicta

Species: Solenopsis invicta

Genus: Solenopsis

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328785527|ref|XP_392991.3| PREDICTED: protein lin-54 homolog isoform 1 [Apis mellifera]

 Score =  168 bits (425), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 79/103 (76%), Positives = 89/103 (86%), Gaps = 1/103 (0%)

Query: 85  TLEPNGIRPRKPCNCTKSMCLKLYCDCFANGEFCYQCNCNSCFNNIEHEDDRHHAIRQCL 144
           ++EPNGIRPRKPCNCTKS CLKLYCDCFANGEFC+ CNCN+C NN+ +E++R  AI+ CL
Sbjct: 598 SVEPNGIRPRKPCNCTKSQCLKLYCDCFANGEFCHMCNCNNCSNNLGNEEERQRAIKSCL 657

Query: 145 ERNPNAFRPKIGKCL-VGEGERRHTKGCNCKRSGCLKNYCECY 186
           ERNPNAFRPKIGK    G+  RRH KGCNCKRSGCLKNYCECY
Sbjct: 658 ERNPNAFRPKIGKGRETGDDIRRHNKGCNCKRSGCLKNYCECY 700

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383858991|ref|XP_003704982.1| PREDICTED: protein lin-54 homolog isoform 2 [Megachile rotundata]

 Score =  167 bits (424), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 79/103 (76%), Positives = 89/103 (86%), Gaps = 1/103 (0%)

Query: 85  TLEPNGIRPRKPCNCTKSMCLKLYCDCFANGEFCYQCNCNSCFNNIEHEDDRHHAIRQCL 144
           ++EPNGIRPRKPCNCTKS CLKLYCDCFANGEFC+ CNCN+C NN+ +E++R  AI+ CL
Sbjct: 597 SVEPNGIRPRKPCNCTKSQCLKLYCDCFANGEFCHMCNCNNCSNNLGNEEERQRAIKSCL 656

Query: 145 ERNPNAFRPKIGKCL-VGEGERRHTKGCNCKRSGCLKNYCECY 186
           ERNPNAFRPKIGK    G+  RRH KGCNCKRSGCLKNYCECY
Sbjct: 657 ERNPNAFRPKIGKGRETGDDIRRHNKGCNCKRSGCLKNYCECY 699

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332021648|gb|EGI62007.1| Protein lin-54-like protein [Acromyrmex echinatior]

 Score =  167 bits (424), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 80/102 (78%), Positives = 88/102 (86%), Gaps = 1/102 (0%)

Query: 86  LEPNGIRPRKPCNCTKSMCLKLYCDCFANGEFCYQCNCNSCFNNIEHEDDRHHAIRQCLE 145
           +EPNGIRPRKPCNCTKS CLKLYCDCFANGEFC+ CNCN+C NN+ +E++R  AI+ CLE
Sbjct: 631 VEPNGIRPRKPCNCTKSQCLKLYCDCFANGEFCHMCNCNNCSNNLGNEEERQRAIKSCLE 690

Query: 146 RNPNAFRPKIGKCL-VGEGERRHTKGCNCKRSGCLKNYCECY 186
           RNPNAFRPKIGK    GE  RRH KGCNCKRSGCLKNYCECY
Sbjct: 691 RNPNAFRPKIGKGRETGEDIRRHNKGCNCKRSGCLKNYCECY 732

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340722922|ref|XP_003399848.1| PREDICTED: protein lin-54 homolog isoform 2 [Bombus terrestris]

 Score =  167 bits (424), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 79/103 (76%), Positives = 89/103 (86%), Gaps = 1/103 (0%)

Query: 85  TLEPNGIRPRKPCNCTKSMCLKLYCDCFANGEFCYQCNCNSCFNNIEHEDDRHHAIRQCL 144
           ++EPNGIRPRKPCNCTKS CLKLYCDCFANGEFC+ CNCN+C NN+ +E++R  AI+ CL
Sbjct: 606 SVEPNGIRPRKPCNCTKSQCLKLYCDCFANGEFCHMCNCNNCSNNLGNEEERQRAIKSCL 665

Query: 145 ERNPNAFRPKIGKCL-VGEGERRHTKGCNCKRSGCLKNYCECY 186
           ERNPNAFRPKIGK    G+  RRH KGCNCKRSGCLKNYCECY
Sbjct: 666 ERNPNAFRPKIGKGRETGDDIRRHNKGCNCKRSGCLKNYCECY 708

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	186
UNIPROTKB|Q6MZP7	749	LIN54 "Protein lin-54 homolog"	0.510	0.126	0.768	5e-43
MGI|MGI:2140902	749	Lin54 "lin-54 homolog (C. eleg	0.510	0.126	0.768	5e-43
RGD|1311361	749	Lin54 "lin-54 homolog (C. eleg	0.510	0.126	0.768	5e-43
ZFIN|ZDB-GENE-060929-440	771	lin54 "lin-54 homolog" [Danio	0.559	0.134	0.714	7.3e-42
WB|WBGene00003037	435	lin-54 [Caenorhabditis elegans	0.5	0.213	0.726	3e-37
UNIPROTKB|Q95QD7	435	lin-54 "Protein lin-54" [Caeno	0.5	0.213	0.726	3e-37
FB|FBgn0033846	950	mip120 "Myb-interacting protei	0.564	0.110	0.629	7.2e-35
UNIPROTKB|Q9Y4I5	508	MTL5 "Tesmin" [Homo sapiens (t	0.435	0.159	0.654	3.3e-33
UNIPROTKB|F1RY65	511	MTL5 "Uncharacterized protein"	0.435	0.158	0.691	1.1e-31
UNIPROTKB|E2R7U4	516	MTL5 "Uncharacterized protein"	0.435	0.156	0.679	5.1e-31

UNIPROTKB|Q6MZP7 LIN54 "Protein lin-54 homolog" [Homo sapiens (taxid:9606)]

 Score = 460 (167.0 bits), Expect = 5.0e-43, P = 5.0e-43
 Identities = 73/95 (76%), Positives = 84/95 (88%)

Query:    92 RPRKPCNCTKSMCLKLYCDCFANGEFCYQCNCNSCFNNIEHEDDRHHAIRQCLERNPNAF 151
             RPRKPCNCTKS+CLKLYCDCFANGEFC  CNC +C+NN+EHE++R  AI+ CL+RNP AF
Sbjct:   520 RPRKPCNCTKSLCLKLYCDCFANGEFCNNCNCTNCYNNLEHENERQKAIKACLDRNPEAF 579

Query:   152 RPKIGKCLVGEGERRHTKGCNCKRSGCLKNYCECY 186
             +PKIGK   GE +RRH+KGCNCKRSGCLKNYCECY
Sbjct:   580 KPKIGKGKEGESDRRHSKGCNCKRSGCLKNYCECY 614

GO:0003677 "DNA binding" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0000278 "mitotic cell cycle" evidence=TAS

GO:0005654 "nucleoplasm" evidence=TAS

MGI|MGI:2140902 Lin54 "lin-54 homolog (C. elegans)" [Mus musculus (taxid:10090)]

 Score = 460 (167.0 bits), Expect = 5.0e-43, P = 5.0e-43
 Identities = 73/95 (76%), Positives = 84/95 (88%)

Query:    92 RPRKPCNCTKSMCLKLYCDCFANGEFCYQCNCNSCFNNIEHEDDRHHAIRQCLERNPNAF 151
             RPRKPCNCTKS+CLKLYCDCFANGEFC  CNC +C+NN+EHE++R  AI+ CL+RNP AF
Sbjct:   520 RPRKPCNCTKSLCLKLYCDCFANGEFCNNCNCTNCYNNLEHENERQKAIKACLDRNPEAF 579

Query:   152 RPKIGKCLVGEGERRHTKGCNCKRSGCLKNYCECY 186
             +PKIGK   GE +RRH+KGCNCKRSGCLKNYCECY
Sbjct:   580 KPKIGKGKEGESDRRHSKGCNCKRSGCLKNYCECY 614

GO:0003674 "molecular_function" evidence=ND

GO:0003677 "DNA binding" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0005634 "nucleus" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007049 "cell cycle" evidence=IEA

GO:0008150 "biological_process" evidence=ND

RGD|1311361 Lin54 "lin-54 homolog (C. elegans)" [Rattus norvegicus (taxid:10116)]

 Score = 460 (167.0 bits), Expect = 5.0e-43, P = 5.0e-43
 Identities = 73/95 (76%), Positives = 84/95 (88%)

Query:    92 RPRKPCNCTKSMCLKLYCDCFANGEFCYQCNCNSCFNNIEHEDDRHHAIRQCLERNPNAF 151
             RPRKPCNCTKS+CLKLYCDCFANGEFC  CNC +C+NN+EHE++R  AI+ CL+RNP AF
Sbjct:   520 RPRKPCNCTKSLCLKLYCDCFANGEFCNNCNCTNCYNNLEHENERQKAIKACLDRNPEAF 579

Query:   152 RPKIGKCLVGEGERRHTKGCNCKRSGCLKNYCECY 186
             +PKIGK   GE +RRH+KGCNCKRSGCLKNYCECY
Sbjct:   580 KPKIGKGKEGESDRRHSKGCNCKRSGCLKNYCECY 614

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007049 "cell cycle" evidence=IEA

ZFIN|ZDB-GENE-060929-440 lin54 "lin-54 homolog" [Danio rerio (taxid:7955)]

 Score = 450 (163.5 bits), Expect = 7.3e-42, P = 7.3e-42
 Identities = 75/105 (71%), Positives = 86/105 (81%)

Query:    82 GARTLEPNGIRPRKPCNCTKSMCLKLYCDCFANGEFCYQCNCNSCFNNIEHEDDRHHAIR 141
             G  T E N  RPRKPCNCT+S CLKLYCDCFANGEFC  CNC +CFNN++HE +R  AI+
Sbjct:   534 GLSTSEANS-RPRKPCNCTRSQCLKLYCDCFANGEFCNNCNCVNCFNNLDHESERLKAIK 592

Query:   142 QCLERNPNAFRPKIGKCLVGEGERRHTKGCNCKRSGCLKNYCECY 186
              CL+RNP AF+PKIGK   GE +RRH+KGCNCK+SGCLKNYCECY
Sbjct:   593 ACLDRNPVAFKPKIGKGKEGESDRRHSKGCNCKKSGCLKNYCECY 637

GO:0003677 "DNA binding" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0007049 "cell cycle" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

WB|WBGene00003037 lin-54 [Caenorhabditis elegans (taxid:6239)]

 Score = 400 (145.9 bits), Expect = 3.0e-37, P = 3.0e-37
 Identities = 69/95 (72%), Positives = 75/95 (78%)

Query:    94 RKPCNCTKSMCLKLYCDCFANGEFCYQCNCNSCFNNIEHEDDRHHAIRQCLERNPNAFRP 153
             RKPCNCTKS CLKLYCDCFANGEFC  CNC  C NNIE++  R  AIRQ LERNPNAF+P
Sbjct:   174 RKPCNCTKSQCLKLYCDCFANGEFCRDCNCKDCHNNIEYDSQRSKAIRQSLERNPNAFKP 233

Query:   154 KIGKCLVG--EGERRHTKGCNCKRSGCLKNYCECY 186
             KIG    G  + ER H KGC+CK+SGCLKNYCECY
Sbjct:   234 KIGIARGGITDIERLHQKGCHCKKSGCLKNYCECY 268

GO:0040010 "positive regulation of growth rate" evidence=IMP

GO:0040035 "hermaphrodite genitalia development" evidence=IMP

GO:0009792 "embryo development ending in birth or egg hatching" evidence=IMP

GO:0040027 "negative regulation of vulval development" evidence=IMP

GO:0006898 "receptor-mediated endocytosis" evidence=IMP

GO:0006357 "regulation of transcription from RNA polymerase II promoter" evidence=ISS

GO:0005634 "nucleus" evidence=IDA

GO:0000794 "condensed nuclear chromosome" evidence=IDA

GO:0070176 "DRM complex" evidence=IDA

GO:0030849 "autosome" evidence=IDA

GO:0001046 "core promoter sequence-specific DNA binding" evidence=IDA

UNIPROTKB|Q95QD7 lin-54 "Protein lin-54" [Caenorhabditis elegans (taxid:6239)]

 Score = 400 (145.9 bits), Expect = 3.0e-37, P = 3.0e-37
 Identities = 69/95 (72%), Positives = 75/95 (78%)

Query:    94 RKPCNCTKSMCLKLYCDCFANGEFCYQCNCNSCFNNIEHEDDRHHAIRQCLERNPNAFRP 153
             RKPCNCTKS CLKLYCDCFANGEFC  CNC  C NNIE++  R  AIRQ LERNPNAF+P
Sbjct:   174 RKPCNCTKSQCLKLYCDCFANGEFCRDCNCKDCHNNIEYDSQRSKAIRQSLERNPNAFKP 233

Query:   154 KIGKCLVG--EGERRHTKGCNCKRSGCLKNYCECY 186
             KIG    G  + ER H KGC+CK+SGCLKNYCECY
Sbjct:   234 KIGIARGGITDIERLHQKGCHCKKSGCLKNYCECY 268

GO:0070176 "DRM complex" evidence=IDA

FB|FBgn0033846 mip120 "Myb-interacting protein 120" [Drosophila melanogaster (taxid:7227)]

 Score = 388 (141.6 bits), Expect = 7.2e-35, P = 7.2e-35
 Identities = 68/108 (62%), Positives = 79/108 (73%)

Query:    81 AGARTLEPNG--IRPRKPCNCTKSMCLKLYCDCFANGEFCYQCNCNSCFNNIEHEDDRHH 138
             A A  ++P G     RK CNC+KS CLKLYCDCFANGEFC  C C  CFNN+++E +R  
Sbjct:   723 AAAGAVDPLGGMTSRRKHCNCSKSQCLKLYCDCFANGEFCQDCTCKDCFNNLDYEVERER 782

Query:   139 AIRQCLERNPNAFRPKIGKCLVGEGERRHTKGCNCKRSGCLKNYCECY 186
             AIR CL+RNP+AF+PKI     G+  R H KGCNCKRSGCLKNYCECY
Sbjct:   783 AIRSCLDRNPSAFKPKITAPNSGD-MRLHNKGCNCKRSGCLKNYCECY 829

GO:0003677 "DNA binding" evidence=IDA

GO:0007307 "eggshell chorion gene amplification" evidence=IC

GO:0031523 "Myb complex" evidence=IDA

GO:0000785 "chromatin" evidence=IDA

GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=IMP

GO:0005515 "protein binding" evidence=IPI

GO:0048477 "oogenesis" evidence=IMP

GO:0030317 "sperm motility" evidence=IMP

GO:0008340 "determination of adult lifespan" evidence=IMP

GO:0005700 "polytene chromosome" evidence=IDA

UNIPROTKB|Q9Y4I5 MTL5 "Tesmin" [Homo sapiens (taxid:9606)]

 Score = 332 (121.9 bits), Expect = 3.3e-33, Sum P(2) = 3.3e-33
 Identities = 53/81 (65%), Positives = 65/81 (80%)

Query:     1 YCDCFANGEFCYQCNCNSCFNNIEHEDDRHHAIRQCLERNPNAFRPKIGKCLVGEGERRH 60
             YCDCFA+G+FC  CNCN+C NN+ H+ +R  AI+ CL RNP AF+PKIGK  +G  + +H
Sbjct:   307 YCDCFASGDFCNNCNCNNCCNNLHHDIERFKAIKACLGRNPEAFQPKIGKGQLGNVKPQH 366

Query:    61 TKGCNCKRSGCLKNYCECYEA 81
              KGCNC+RSGCLKNYCECYEA
Sbjct:   367 NKGCNCRRSGCLKNYCECYEA 387

GO:0007275 "multicellular organismal development" evidence=IEA

GO:0030154 "cell differentiation" evidence=IEA

GO:0007283 "spermatogenesis" evidence=NAS

GO:0005634 "nucleus" evidence=ISS

GO:0005737 "cytoplasm" evidence=ISS

GO:0046872 "metal ion binding" evidence=NAS

GO:0010038 "response to metal ion" evidence=NAS

GO:0006875 "cellular metal ion homeostasis" evidence=NAS

UNIPROTKB|F1RY65 MTL5 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 348 (127.6 bits), Expect = 1.1e-31, P = 1.1e-31
 Identities = 56/81 (69%), Positives = 67/81 (82%)

Query:     1 YCDCFANGEFCYQCNCNSCFNNIEHEDDRHHAIRQCLERNPNAFRPKIGKCLVGEGERRH 60
             YCDCFA+G+FC  CNCN+C NN+ HE +R  AI+ CL+RNP AF+PKIGK  +G+ + RH
Sbjct:   310 YCDCFASGDFCNNCNCNNCCNNLRHEIERFKAIKACLDRNPEAFQPKIGKGKLGDVKPRH 369

Query:    61 TKGCNCKRSGCLKNYCECYEA 81
              KGCNCKRSGCLKNYCECYEA
Sbjct:   370 NKGCNCKRSGCLKNYCECYEA 390

GO:0005737 "cytoplasm" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

UNIPROTKB|E2R7U4 MTL5 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 343 (125.8 bits), Expect = 5.1e-31, P = 5.1e-31
 Identities = 55/81 (67%), Positives = 66/81 (81%)

Query:     1 YCDCFANGEFCYQCNCNSCFNNIEHEDDRHHAIRQCLERNPNAFRPKIGKCLVGEGERRH 60
             YCDCFA+G+FC  CNCN+C NN+ HE  R  AI+ CL+RNP AF+PKIGK  +G+ + RH
Sbjct:   315 YCDCFASGDFCNNCNCNNCCNNLHHEIQRFKAIKACLDRNPEAFQPKIGKGKLGDVKPRH 374

Query:    61 TKGCNCKRSGCLKNYCECYEA 81
              KGCNC+RSGCLKNYCECYEA
Sbjct:   375 NKGCNCRRSGCLKNYCECYEA 395

GO:0005737 "cytoplasm" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
A1Z9E2	LIN54_DROME	No assigned EC number	0.6881	0.4946	0.0968	yes	N/A
Q08CM4	LIN54_DANRE	No assigned EC number	0.7142	0.5591	0.1348	yes	N/A
Q5RBN8	LIN54_PONAB	No assigned EC number	0.7684	0.5107	0.1799	yes	N/A
Q95QD7	LIN54_CAEEL	No assigned EC number	0.7157	0.5	0.2137	yes	N/A
Q9SL70	TCX6_ARATH	No assigned EC number	0.5384	0.5	0.1628	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	186
pfam03638	42	pfam03638, CXC, Tesmin/TSO1-like CXC domain	2e-07
pfam03638	42	pfam03638, CXC, Tesmin/TSO1-like CXC domain	0.004

>gnl|CDD|202712 pfam03638, CXC, Tesmin/TSO1-like CXC domain

 Score = 45.3 bits (108), Expect = 2e-07
 Identities = 22/42 (52%), Positives = 27/42 (64%), Gaps = 1/42 (2%)

Query: 92  RPRKPCNCTKSMCLKLYCDCFANGEFC-YQCNCNSCFNNIEH 132
           R +K CNC KS CLK YC+CFA G++C   C C  C N  E+
Sbjct: 1   RHKKGCNCKKSKCLKKYCECFAAGKYCSSLCKCEGCKNKEEN 42

This family includes proteins that have two copies of a cysteine rich motif as follows: C-X-C-X4-C-X3-YC-X-C-X6-C-X3-C-X-C-X2-C. The family includes Tesmin and TSO1. This family is called a CXC domain in. Length = 42

>gnl|CDD|202712 pfam03638, CXC, Tesmin/TSO1-like CXC domain

 Score = 33.4 bits (77), Expect = 0.004
 Identities = 16/21 (76%), Positives = 18/21 (85%)

Query: 166 RHTKGCNCKRSGCLKNYCECY 186
           RH KGCNCK+S CLK YCEC+
Sbjct: 1   RHKKGCNCKKSKCLKKYCECF 21

This family includes proteins that have two copies of a cysteine rich motif as follows: C-X-C-X4-C-X3-YC-X-C-X6-C-X3-C-X-C-X2-C. The family includes Tesmin and TSO1. This family is called a CXC domain in. Length = 42

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	186
KOG1171|consensus	406		99.97
KOG1171|consensus	406		99.97
PF03638	42	TCR: Tesmin/TSO1-like CXC domain, cysteine-rich do	99.53
PF03638	42	TCR: Tesmin/TSO1-like CXC domain, cysteine-rich do	98.64

>KOG1171|consensus

Probab=99.97  E-value=2.5e-32  Score=248.19  Aligned_cols=100  Identities=58%  Similarity=1.246  Sum_probs=86.5

Q ss_pred             CcccccCCCCCCC-CCCCCCCCCccCHHHHHHHHHHHHHhCCCCcccccccccCC-----------CCcccccccccccC
Q psy17547          1 YCDCFANGEFCYQ-CNCNSCFNNIEHEDDRHHAIRQCLERNPNAFRPKIGKCLVG-----------EGERRHTKGCNCKR   68 (186)
Q Consensus         1 YCeCFa~g~~C~~-CnC~~C~N~~~~~~~R~~Ai~~~l~rNP~AF~pki~~~~~~-----------~~~~~h~kGCnCKK   68 (186)
                      ||||||+|.||.+ |||.+|+|+++|+++|.+||++||+|||+||+|||+.+..+           ...++|.+||+|||
T Consensus       145 YCeCFAsG~yC~~~CnCvnC~N~~~~e~~r~~a~k~~l~RNP~AFkPKia~s~~~~~da~~~~~~~~~sa~hkkGC~Ckk  224 (406)
T KOG1171|consen  145 YCECFASGVYCTGPCNCVNCFNNPEHESVRLKARKQILERNPNAFKPKIAASSSGIADASEEASKTPASARHKKGCNCKK  224 (406)
T ss_pred             hHHHHhhcccccCCcceeeccCCCcchHHHHHHHHHHhhcCccccccccccCCcccchhhhhhhccchhhhhcCCCCCcc
Confidence            9999999999995 99999999999999999999999999999999999864211           22358899999999


Q ss_pred             CCccccchhhhhccccccCCCCCCCCCCccCCCccccccccccccCCCCCC-CCCCCCCCCCccch
Q psy17547         69 SGCLKNYCECYEAGARTLEPNGIRPRKPCNCTKSMCLKLYCDCFANGEFCY-QCNCNSCFNNIEHE  133 (186)
Q Consensus        69 S~ClKkYCeCfq~g~~~~~~~~~~~~~~C~C~ks~Clk~YC~Cf~~g~~C~-~C~C~~C~N~~~~~  133 (186)
                      |+||||||||||+|+                                 .|+ +|+|++|+|+..+.
T Consensus       225 SgClKkYCECyQa~v---------------------------------lCS~nCkC~~CkN~~g~~  257 (406)
T KOG1171|consen  225 SGCLKKYCECYQAGV---------------------------------LCSSNCKCQGCKNNFGYK  257 (406)
T ss_pred             ccchHHHHHHHhcCC---------------------------------CccccccCcCCccchhhc
Confidence            998888888888776                                 577 99999999955543

>KOG1171|consensus

Probab=99.97  E-value=8.8e-32  Score=244.66  Aligned_cols=94  Identities=64%  Similarity=1.315  Sum_probs=85.7

Q ss_pred             CCCCccCCCccccccccccccCCCCCC-CCCCCCCCCCccchhhhHHHHHHHHhhCCCccccccccccCC----------
Q psy17547         93 PRKPCNCTKSMCLKLYCDCFANGEFCY-QCNCNSCFNNIEHEDDRHHAIRQCLERNPNAFRPKIGKCLVG----------  161 (186)
Q Consensus        93 ~~~~C~C~ks~Clk~YC~Cf~~g~~C~-~C~C~~C~N~~~~~~~r~~ai~~il~RNP~AF~pk~~~~~~~----------  161 (186)
                      +.+.|+|++|+|||+||||||+|.||+ .|+|+||+|+++|+.+|++||+.||+|||+||.|||..+..+          
T Consensus       130 ~k~~~~ck~SkclklYCeCFAsG~yC~~~CnCvnC~N~~~~e~~r~~a~k~~l~RNP~AFkPKia~s~~~~~da~~~~~~  209 (406)
T KOG1171|consen  130 SKKKCNCKKSKCLKLYCECFASGVYCTGPCNCVNCFNNPEHESVRLKARKQILERNPNAFKPKIAASSSGIADASEEASK  209 (406)
T ss_pred             CccCCCchHHHHHHHhHHHHhhcccccCCcceeeccCCCcchHHHHHHHHHHhhcCccccccccccCCcccchhhhhhhc
Confidence            466889999999999999999999999 599999999999999999999999999999999999854422          


Q ss_pred             -CCCCccCCCccccCCCccccccccC
Q psy17547        162 -EGERRHTKGCNCKRSGCLKNYCECY  186 (186)
Q Consensus       162 -~~~~~~~~GC~CkkS~ClKkYCeCf  186 (186)
                       ..+.+|.+||+||||+|||||||||
T Consensus       210 ~~~sa~hkkGC~CkkSgClKkYCECy  235 (406)
T KOG1171|consen  210 TPASARHKKGCNCKKSGCLKKYCECY  235 (406)
T ss_pred             cchhhhhcCCCCCccccchHHHHHHH
Confidence             1345799999999999999999998

>PF03638 TCR: Tesmin/TSO1-like CXC domain, cysteine-rich domain; InterPro: IPR005172 This entry includes proteins that have two copies of a cysteine rich motif as follows: C-X-C-X4-C-X3-YC-X-C-X6-C-X3-C-X-C-X2-C

Probab=99.53  E-value=3.4e-15  Score=97.50  Aligned_cols=40  Identities=55%  Similarity=1.344  Sum_probs=37.2

Q ss_pred             CCCCccCCCccccccccccccCCCCCC-CCCCCCCCCCccc
Q psy17547         93 PRKPCNCTKSMCLKLYCDCFANGEFCY-QCNCNSCFNNIEH  132 (186)
Q Consensus        93 ~~~~C~C~ks~Clk~YC~Cf~~g~~C~-~C~C~~C~N~~~~  132 (186)
                      ..++|+|+||+|||+|||||++|++|+ .|+|.+|.|+.+|
T Consensus         2 ~~~gC~Ckks~Clk~YC~Cf~~g~~C~~~C~C~~C~N~~~~   42 (42)
T PF03638_consen    2 KKKGCNCKKSKCLKLYCECFQAGRFCTPNCKCQNCKNTEEN   42 (42)
T ss_pred             CCCCCcccCcChhhhhCHHHHCcCcCCCCcccCCCCCcCCC
Confidence            457999999999999999999999999 8999999999875

The family includes Tesmin Q9Y4I5 from SWISSPROT [] and TSO1 Q9LE32 from SWISSPROT []. This group of proteins is called a CXC domain in [].

>PF03638 TCR: Tesmin/TSO1-like CXC domain, cysteine-rich domain; InterPro: IPR005172 This entry includes proteins that have two copies of a cysteine rich motif as follows: C-X-C-X4-C-X3-YC-X-C-X6-C-X3-C-X-C-X2-C

Probab=98.64  E-value=9.9e-09  Score=67.14  Aligned_cols=26  Identities=62%  Similarity=1.356  Sum_probs=24.5

Q ss_pred             ccccccccCCCccccchhhhhccccc
Q psy17547         60 HTKGCNCKRSGCLKNYCECYEAGART   85 (186)
Q Consensus        60 h~kGCnCKKS~ClKkYCeCfq~g~~~   85 (186)
                      +.+||+|+||+|||+|||||++|+.+
T Consensus         2 ~~~gC~Ckks~Clk~YC~Cf~~g~~C   27 (42)
T PF03638_consen    2 KKKGCNCKKSKCLKLYCECFQAGRFC   27 (42)
T ss_pred             CCCCCcccCcChhhhhCHHHHCcCcC
Confidence            67899999999999999999999876

The family includes Tesmin Q9Y4I5 from SWISSPROT [] and TSO1 Q9LE32 from SWISSPROT []. This group of proteins is called a CXC domain in [].

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	186
2lua_A	52	Protein MALE-specific lethal-2; DNA binding protei	94.68
2lua_A	52	Protein MALE-specific lethal-2; DNA binding protei	81.41

>2lua_A Protein MALE-specific lethal-2; DNA binding protein, metal binding; NMR {Drosophila melanogaster}

Probab=94.68  E-value=0.024  Score=37.75  Aligned_cols=29  Identities=28%  Similarity=0.786  Sum_probs=25.3

Q ss_pred             cccccccccccCCCCCCCCCCCCCCCCcc
Q psy17547        103 MCLKLYCDCFANGEFCYQCNCNSCFNNIE  131 (186)
Q Consensus       103 ~Clk~YC~Cf~~g~~C~~C~C~~C~N~~~  131 (186)
                      .|--.-|.||.+|.-|.+|+|.+|+|...
T Consensus        20 TC~~~RCpCY~~~~sC~~C~C~GCkNPhk   48 (52)
T 2lua_A           20 TCRNSRCPCYKSYNSCAGCHCVGCKNPHK   48 (52)
T ss_dssp             TTTSTTCHHHHTTCCCSSCCCSSCCCSCC
T ss_pred             eEcCCccceecCCCccCCCEecCcCCCCc
Confidence            46667789999999999999999999753

>2lua_A Protein MALE-specific lethal-2; DNA binding protein, metal binding; NMR {Drosophila melanogaster}

Probab=81.41  E-value=0.46  Score=31.53  Aligned_cols=23  Identities=30%  Similarity=0.909  Sum_probs=20.6

Q ss_pred             cccccCCCCCCCCCCCCCCCCcc
Q psy17547          2 CDCFANGEFCYQCNCNSCFNNIE   24 (186)
Q Consensus         2 CeCFa~g~~C~~CnC~~C~N~~~   24 (186)
                      |-||-+|.-|.+|.|.+|+|...
T Consensus        26 CpCY~~~~sC~~C~C~GCkNPhk   48 (52)
T 2lua_A           26 CPCYKSYNSCAGCHCVGCKNPHK   48 (52)
T ss_dssp             CHHHHTTCCCSSCCCSSCCCSCC
T ss_pred             cceecCCCccCCCEecCcCCCCc
Confidence            77999999999999999999753

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00