Psyllid ID: psy17732

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180------
Protein Sequence
MIRKWADDGGFSWDDVEAIEEPKAQRSLPPKQLRVLAGAPAEKKPEETQARDIGAQKDSEIQALHFPKKRDIKKTREFHHWVRPTRLQYRYNYDYAHNYYDDVIHYLNSKSQGGHVTELPRPQTWAERALRTYTKDWPDTATYEKTKADEELLQKLRFSGKFYAQHSKEFYNRKYRDVLYAYITHW
Secondary Structure (PSIPRED)
cccccccccccccccHHHHccccccccccccccccccccccccccccHHHHHcccccccccccccccccccccccccccccccccccccHHHHccccccHHHHHHHHHHcccccccccccccccHHHHHHHHHcccccccccccccHHHHHHHHHHHcccccEEHHHHHHHHHHHHHHHHHHHccc
Secondary Structure Prediction (SSPRO)
cccEEcccccccccccccccccccccccccccHccccccccccccccccccccccccccccccccccccccccccEEEEEEEccHHHHHHHHHHHHHHcHHHHHHHHHHHHccccccccccHHHHHHHHHHccccccccccHccccHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHEEEEccc
Coil and Loop (DISEMBL)
mirkwaddggfswddveaieepkaqrslppkqlrvlagapaekkpeetqardigaqkdseiqalhfpkkrdikktrefhhwvrptrlqyrynydyahnyYDDVIHYLnsksqgghvtelprpqtwAERALRTYtkdwpdtatyekTKADEELLQKLRFSGKFYAQHSKEFYNRKYRDVLYAYITHW
Flexible Loop (DISEMBL)
mirkwaddggfswdDVEAIEepkaqrslppkqLRVLAGApaekkpeetqardigaqkdseiqalhfpkkrdikktrefhhwvrptrlqyrynYDYAHNYYDDVIHYLNSKSQGGHVTELPRPQTWAERALRTytkdwpdtatyekTKADEELLQKLRFSGKfyaqhskefynrkyrDVLYAYITHW
Low Complexity Region (SEG)
MIRKWADDGGFSWDDVEAIEEPKAQRSLPPKQLRVLAGAPAEKKPEETQARDIGAQKDSEIQALHFPKKRDIKKTREFHHWVRPTRLQyrynydyahnyyddVIHYLNSKSQGGHVTELPRPQTWAERALRTYTKDWPDTATYEKTKADEELLQKLRFSGKFYAQHSKEFYNRKYRDVLYAYITHW
Disordered region (IsUnstruct)
**********************************************************************DIKKTREFHHWVRPTRLQYRYNYDYAHNYYDDVIHYLNSKSQGGHVTELPRPQTWAERALRTYTKDWPDTATYEKTKADEELLQKLRFSGKFYAQHSKEFYNRKYRDVLYAYITH*
Disordered Region (DISOPRED)
**RKW**DGGFSWD*****************************************************KKRDIKKTREFHHWVRPTRLQYRYNYDYAHNYYDDVIHYLNSKS************TWAERALRTYTK**************EELLQKLRFSGKFYAQHSKEFYNRKYRDVLYAYITHW
Disordered Region (DISEMBL)
********GGFSWDDVEAIEEPKAQRSLPPKQLRVLAGA*************IGAQKDSEIQALHFPKKRDIKKTREFHHWVRPTRLQYRYNYDYAHNYYDDVIHYLNSKSQGGHVTELPRPQTWAERALRTYTKDWPDTATYEKTKADEELLQKLRFSGKFYAQHSKEFYNRKYRDVLYAYITHW
Disordered Region (DISPRO)
**********************************************************SEIQALHFPKKRDIKKTREFHHWVRPTRLQYRYNYDYAHNYYDDVIHYLNSKSQGGHVTELPRPQTWAERALRTYTKDWPDTATYEKTKADEELLQKLRFSGKFYAQHSKEFYNRKYRDVLYAYITHW
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MIRKWADDGGFSWDDVEAIEEPKAQRSLPPKQLRVLAGAPAEKKPEETQARDIGAQKDSEIQALHFPKKRDIKKTREFHHWVRPTRLQYRYNYDYAHNYYDDVIHYLNSKSQGGHVTELPRPQTWAERALRTYTKDWPDTATYEKTKADEELLQKLRFSGKFYAQHSKEFYNRKYRDVLYAYITHW
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	186	2.2.26 [Sep-21-2011]
P35554	182	Flightin OS=Drosophila me	yes	N/A	0.569	0.582	0.476	7e-21

>sp|P35554|FTN_DROME Flightin OS=Drosophila melanogaster GN=fln PE=2 SV=1

 Score =  100 bits (248), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 51/107 (47%), Positives = 67/107 (62%), Gaps = 1/107 (0%)

Query: 73  KKTREFHHWVRPTRLQYRYNYDYAHNYYDDVIHYLNSKSQGGHVTELPRPQTWAERALRT 132
           K  + + HWVRP  LQY+Y Y+Y  NYYDDVI Y++ K Q G   E+PRPQTWAER LRT
Sbjct: 77  KPVQLYRHWVRPKFLQYKYMYNYRTNYYDDVIDYIDKK-QTGVAREIPRPQTWAERVLRT 135

Query: 133 YTKDWPDTATYEKTKADEELLQKLRFSGKFYAQHSKEFYNRKYRDVL 179
                 D  +Y   K D++L+Q L  S + Y  H+K + N++Y  VL
Sbjct: 136 RNISGSDIDSYAPAKRDKQLIQTLAASIRTYNYHTKAYINQRYASVL 182

Possibly involved in the regulation of flight muscles contraction, possibly by modulating actin-myosin interaction.
Drosophila melanogaster (taxid: 7227)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	186
198470610	181	GA22938, partial [Drosophila pseudoobscu	0.935	0.961	0.381	3e-20
195162632	187	GL25050 [Drosophila persimilis] gi|19410	0.935	0.930	0.381	3e-20
270016484	203	hypothetical protein TcasGA2_TC010476 [T	0.543	0.497	0.480	3e-19
195127567	183	GI13378 [Drosophila mojavensis] gi|19391	0.887	0.901	0.386	3e-19
17737667	182	flightin, isoform A [Drosophila melanoga	0.569	0.582	0.476	3e-19
195496061	182	fln [Drosophila yakuba] gi|33328967|gb|A	0.569	0.582	0.476	3e-19
194874537	185	GG13353 [Drosophila erecta] gi|190655200	0.569	0.572	0.476	4e-19
91093201	169	PREDICTED: similar to flightin CG7445-PA	0.543	0.597	0.480	7e-19
195378751	187	GJ11502 [Drosophila virilis] gi|19415530	0.935	0.930	0.364	2e-18
158285989	141	AGAP007249-PA [Anopheles gambiae str. PE	0.543	0.716	0.509	4e-18

>gi|198470610|ref|XP_002133518.1| GA22938, partial [Drosophila pseudoobscura pseudoobscura] gi|198145534|gb|EDY72146.1| GA22938, partial [Drosophila pseudoobscura pseudoobscura]

 Score =  103 bits (257), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 69/181 (38%), Positives = 99/181 (54%), Gaps = 7/181 (3%)

Query: 5   WADDGGFSWDDVEAIEEPKAQRS-LPPKQLRVLAGAPAEK-KPEETQARDIG-AQKDSEI 61
           W DD G   ++V A+  P A+    P K   V++   +E      T A++   A+ + E 
Sbjct: 2   WGDDAGGDTEEVAAVPTPAAETPKAPSKAGSVVSDHKSESIGVAGTPAKEASIAEGEIEF 61

Query: 62  QALHFPKKRDI--KKTREFHHWVRPTRLQYRYNYDYAHNYYDDVIHYLNSKSQGGHVTEL 119
           +A   P + D   K  + + HWVRP  LQY+Y Y+Y  NYYDDVI Y++ K Q G   ++
Sbjct: 62  KAPPLPPEDDGYRKPVQLYRHWVRPKFLQYKYMYNYRTNYYDDVIDYID-KKQVGVARDI 120

Query: 120 PRPQTWAERALRTYTKDWPDTATYEKT-KADEELLQKLRFSGKFYAQHSKEFYNRKYRDV 178
           PRPQTWAER LRT         ++E + K D++L Q L  S + Y  H+K + N+KY  V
Sbjct: 121 PRPQTWAERVLRTRNVSGSGIDSFEPSAKRDKQLTQTLAASIRTYNYHTKAYMNQKYGSV 180

Query: 179 L 179
           L
Sbjct: 181 L 181

Source: Drosophila pseudoobscura pseudoobscura

Species: Drosophila pseudoobscura

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195162632|ref|XP_002022158.1| GL25050 [Drosophila persimilis] gi|194104119|gb|EDW26162.1| GL25050 [Drosophila persimilis]

 Score =  103 bits (257), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 69/181 (38%), Positives = 99/181 (54%), Gaps = 7/181 (3%)

Query: 5   WADDGGFSWDDVEAIEEPKAQRS-LPPKQLRVLAGAPAEK-KPEETQARDIG-AQKDSEI 61
           W DD G   ++V A+  P A+    P K   V++   +E      T A++   A+ + E 
Sbjct: 8   WGDDAGGDTEEVAAVPTPAAETPKAPSKAGSVVSDHKSESIGVAGTPAKEASIAEGEIEF 67

Query: 62  QALHFPKKRDI--KKTREFHHWVRPTRLQYRYNYDYAHNYYDDVIHYLNSKSQGGHVTEL 119
           +A   P + D   K  + + HWVRP  LQY+Y Y+Y  NYYDDVI Y++ K Q G   ++
Sbjct: 68  KAPPLPPEDDGYRKPVQLYRHWVRPKFLQYKYMYNYRTNYYDDVIDYID-KKQVGVARDI 126

Query: 120 PRPQTWAERALRTYTKDWPDTATYEKT-KADEELLQKLRFSGKFYAQHSKEFYNRKYRDV 178
           PRPQTWAER LRT         ++E + K D++L Q L  S + Y  H+K + N+KY  V
Sbjct: 127 PRPQTWAERVLRTRNVSGSGIDSFEPSAKRDKQLTQTLAASIRTYNYHTKAYMNQKYGSV 186

Query: 179 L 179
           L
Sbjct: 187 L 187

Source: Drosophila persimilis

Species: Drosophila persimilis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|270016484|gb|EFA12930.1| hypothetical protein TcasGA2_TC010476 [Tribolium castaneum]

 Score =  100 bits (249), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 49/102 (48%), Positives = 62/102 (60%), Gaps = 1/102 (0%)

Query: 78  FHHWVRPTRLQYRYNYDYAHNYYDDVIHYLNSKSQGGHVTELPRPQTWAERALRTYTKDW 137
           F HW+RP  LQY+Y YDY HNYYDDVI YL+ K Q G   ++P PQTWAERALRTY    
Sbjct: 102 FKHWIRPKFLQYKYLYDYRHNYYDDVIDYLD-KRQKGLRRDIPHPQTWAERALRTYNSKI 160

Query: 138 PDTATYEKTKADEELLQKLRFSGKFYAQHSKEFYNRKYRDVL 179
                +     D +L+ + + SG F   HSK +  R+Y  +L
Sbjct: 161 NKIERFRNLVEDTKLVTQTKISGSFQIHHSKNYITRRYSSIL 202

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195127567|ref|XP_002008240.1| GI13378 [Drosophila mojavensis] gi|193919849|gb|EDW18716.1| GI13378 [Drosophila mojavensis]

 Score =  100 bits (248), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 70/181 (38%), Positives = 96/181 (53%), Gaps = 16/181 (8%)

Query: 7   DDGGFSWDDVEAIEEPKAQRSLPPKQLRVLAGAP-AEKKPEETQARDIGAQKDS----EI 61
           DDGG    D EA  +P       P +   +   P +E  P   Q  D+  ++ +    E+
Sbjct: 11  DDGG----DAEATTQPTGSTDPVPSKPESVKSEPRSEAGP---QGADVPGEESAAEPEEV 63

Query: 62  QALHFPKKRDI--KKTREFHHWVRPTRLQYRYNYDYAHNYYDDVIHYLNSKSQGGHVTEL 119
           +A   P + D   K  + + HWVRP  LQY+Y Y+Y  NYYDDVI YL+ K Q G   ++
Sbjct: 64  KAPPPPPEDDGYRKPVQLYRHWVRPKFLQYKYMYNYRTNYYDDVIDYLD-KKQVGVARDI 122

Query: 120 PRPQTWAERALRTYTKDWPDTATY-EKTKADEELLQKLRFSGKFYAQHSKEFYNRKYRDV 178
           PRPQTWAER LRT   +      Y + TK D+ L+Q L  S + Y  H+K + N+KY  V
Sbjct: 123 PRPQTWAERVLRTRDINAGGIDNYSQSTKRDKHLIQTLAASIRTYNYHTKAYINQKYASV 182

Query: 179 L 179
           L
Sbjct: 183 L 183

Source: Drosophila mojavensis

Species: Drosophila mojavensis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|17737667|ref|NP_524174.1| flightin, isoform A [Drosophila melanogaster] gi|442633542|ref|NP_001262084.1| flightin, isoform B [Drosophila melanogaster] gi|195354326|ref|XP_002043649.1| GM14859 [Drosophila sechellia] gi|195591691|ref|XP_002085572.1| GD12234 [Drosophila simulans] gi|544355|sp|P35554.1|FTN_DROME RecName: Full=Flightin; AltName: Full=Muscle protein 27 gi|7968|emb|CAA79309.1| flightin [Drosophila melanogaster] gi|7293715|gb|AAF49084.1| flightin, isoform A [Drosophila melanogaster] gi|16768262|gb|AAL28350.1| GH26786p [Drosophila melanogaster] gi|194127817|gb|EDW49860.1| GM14859 [Drosophila sechellia] gi|194197581|gb|EDX11157.1| GD12234 [Drosophila simulans] gi|220944234|gb|ACL84660.1| fln-PA [synthetic construct] gi|220954082|gb|ACL89584.1| fln-PA [synthetic construct] gi|440216045|gb|AGB94777.1| flightin, isoform B [Drosophila melanogaster]

 Score =  100 bits (248), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 51/107 (47%), Positives = 67/107 (62%), Gaps = 1/107 (0%)

Query: 73  KKTREFHHWVRPTRLQYRYNYDYAHNYYDDVIHYLNSKSQGGHVTELPRPQTWAERALRT 132
           K  + + HWVRP  LQY+Y Y+Y  NYYDDVI Y++ K Q G   E+PRPQTWAER LRT
Sbjct: 77  KPVQLYRHWVRPKFLQYKYMYNYRTNYYDDVIDYIDKK-QTGVAREIPRPQTWAERVLRT 135

Query: 133 YTKDWPDTATYEKTKADEELLQKLRFSGKFYAQHSKEFYNRKYRDVL 179
                 D  +Y   K D++L+Q L  S + Y  H+K + N++Y  VL
Sbjct: 136 RNISGSDIDSYAPAKRDKQLIQTLAASIRTYNYHTKAYINQRYASVL 182

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195496061|ref|XP_002095533.1| fln [Drosophila yakuba] gi|33328967|gb|AAQ09890.1| fln, partial [Drosophila yakuba] gi|194181634|gb|EDW95245.1| fln [Drosophila yakuba]

 Score =  100 bits (248), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 51/107 (47%), Positives = 67/107 (62%), Gaps = 1/107 (0%)

Query: 73  KKTREFHHWVRPTRLQYRYNYDYAHNYYDDVIHYLNSKSQGGHVTELPRPQTWAERALRT 132
           K  + + HWVRP  LQY+Y Y+Y  NYYDDVI Y++ K Q G   E+PRPQTWAER LRT
Sbjct: 77  KPVQLYRHWVRPKFLQYKYMYNYRTNYYDDVIDYIDKK-QTGVAREIPRPQTWAERVLRT 135

Query: 133 YTKDWPDTATYEKTKADEELLQKLRFSGKFYAQHSKEFYNRKYRDVL 179
                 D  +Y   K D++L+Q L  S + Y  H+K + N++Y  VL
Sbjct: 136 RNISGSDIDSYAPAKRDKQLIQTLAASIRTYNYHTKAYINQRYASVL 182

Source: Drosophila yakuba

Species: Drosophila yakuba

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|194874537|ref|XP_001973417.1| GG13353 [Drosophila erecta] gi|190655200|gb|EDV52443.1| GG13353 [Drosophila erecta]

 Score = 99.8 bits (247), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 51/107 (47%), Positives = 67/107 (62%), Gaps = 1/107 (0%)

Query: 73  KKTREFHHWVRPTRLQYRYNYDYAHNYYDDVIHYLNSKSQGGHVTELPRPQTWAERALRT 132
           K  + + HWVRP  LQY+Y Y+Y  NYYDDVI Y++ K Q G   E+PRPQTWAER LRT
Sbjct: 80  KPVQLYRHWVRPKFLQYKYMYNYRTNYYDDVIDYIDKK-QTGVAREIPRPQTWAERVLRT 138

Query: 133 YTKDWPDTATYEKTKADEELLQKLRFSGKFYAQHSKEFYNRKYRDVL 179
                 D  +Y   K D++L+Q L  S + Y  H+K + N++Y  VL
Sbjct: 139 RNISVGDIDSYAPAKRDKQLIQTLAASIRTYNYHTKAYINQRYASVL 185

Source: Drosophila erecta

Species: Drosophila erecta

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|91093201|ref|XP_969293.1| PREDICTED: similar to flightin CG7445-PA [Tribolium castaneum]

 Score = 99.4 bits (246), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 49/102 (48%), Positives = 62/102 (60%), Gaps = 1/102 (0%)

Query: 78  FHHWVRPTRLQYRYNYDYAHNYYDDVIHYLNSKSQGGHVTELPRPQTWAERALRTYTKDW 137
           F HW+RP  LQY+Y YDY HNYYDDVI YL+ K Q G   ++P PQTWAERALRTY    
Sbjct: 68  FKHWIRPKFLQYKYLYDYRHNYYDDVIDYLD-KRQKGLRRDIPHPQTWAERALRTYNSKI 126

Query: 138 PDTATYEKTKADEELLQKLRFSGKFYAQHSKEFYNRKYRDVL 179
                +     D +L+ + + SG F   HSK +  R+Y  +L
Sbjct: 127 NKIERFRNLVEDTKLVTQTKISGSFQIHHSKNYITRRYSSIL 168

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195378751|ref|XP_002048145.1| GJ11502 [Drosophila virilis] gi|194155303|gb|EDW70487.1| GJ11502 [Drosophila virilis]

 Score = 97.4 bits (241), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 66/181 (36%), Positives = 99/181 (54%), Gaps = 7/181 (3%)

Query: 5   WADDGGFSWDDVEAIEEPKAQRSLPPKQLRVLAGAPAEKKP---EETQARDIGAQKDSEI 61
           W  D G + +     ++P +   +P K   + +   +E  P   EE+  ++  A+ + E+
Sbjct: 8   WGFDEGDTVESDAKSQQPGSTDPVPSKPESIKSEQRSEAGPQAAEESGEQENVAEPEVEM 67

Query: 62  QALHFPKKRDI--KKTREFHHWVRPTRLQYRYNYDYAHNYYDDVIHYLNSKSQGGHVTEL 119
           +A   P + D   K  + + HWVRP  LQY+Y Y+Y  NYYDDVI YL+ K Q G   ++
Sbjct: 68  KAPPPPPEDDGYRKPVQLYRHWVRPKFLQYKYMYNYRTNYYDDVIDYLD-KKQVGVTRDI 126

Query: 120 PRPQTWAERALRTYTKDWPDTATYE-KTKADEELLQKLRFSGKFYAQHSKEFYNRKYRDV 178
           PRPQTWAER LRT   +          TK D++L+Q L  S + Y  H+K + N+KY +V
Sbjct: 127 PRPQTWAERVLRTRDINASGIDHINLSTKRDKQLVQTLAASIRTYNYHTKAYINQKYANV 186

Query: 179 L 179
           L
Sbjct: 187 L 187

Source: Drosophila virilis

Species: Drosophila virilis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|158285989|ref|XP_308552.4| AGAP007249-PA [Anopheles gambiae str. PEST] gi|157020255|gb|EAA04317.4| AGAP007249-PA [Anopheles gambiae str. PEST]

 Score = 96.7 bits (239), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 55/108 (50%), Positives = 67/108 (62%), Gaps = 7/108 (6%)

Query: 78  FHHWVRPTRLQYRYNYDYAHNYYDDVIHYLNSKSQGGHVTELPRPQTWAERALR---TYT 134
           + HWVRP  LQY Y YDY  NYYDDVI YL+ +S+G   +E+PRPQTWAER LR   T T
Sbjct: 35  YKHWVRPQFLQYNYMYDYRVNYYDDVIDYLDRRSRGV-ASEIPRPQTWAERVLRTQKTAT 93

Query: 135 KDWPDTATYEKT---KADEELLQKLRFSGKFYAQHSKEFYNRKYRDVL 179
           +D  D   Y      K D++L+  L    K Y  HSK + NRKYR +L
Sbjct: 94  RDINDAYNYTSISHKKDDKKLMYTLSNQIKSYNCHSKAYTNRKYRKIL 141

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	186
FB|FBgn0005633	182	fln "flightin" [Drosophila mel	0.919	0.939	0.335	1.6e-17

FB|FBgn0005633 fln "flightin" [Drosophila melanogaster (taxid:7227)]

 Score = 214 (80.4 bits), Expect = 1.6e-17, P = 1.6e-17
 Identities = 60/179 (33%), Positives = 85/179 (47%)

Query:     5 WA-DDGGFSWDDVEAIEEPKAQRSLPPKQLRVLAGAPAEKKPEETQARDIGAQKD-SEIQ 62
             W  DDGG   ++ +A        + P K   V +   A+     T A +  A ++  EI+
Sbjct:     8 WGFDDGG---EEEKAASTQAGTPAPPSKAPSVASDHKADSVVAGTPANEEAAPEEVEEIK 64

Query:    63 ALHFPKKRD--IKKTREFHHWVRPTRLQXXXXXXXXXXXXXXVIHYLNSKSQGGHVTELP 120
             A   P + D   K  + + HWVRP  LQ              VI Y++ K Q G   E+P
Sbjct:    65 APPPPPEDDGYRKPVQLYRHWVRPKFLQYKYMYNYRTNYYDDVIDYIDKK-QTGVAREIP 123

Query:   121 RPQTWAERALRTYTKDWPDTATYEKTKADEELLQKLRFSGKFYAQHSKEFYNRKYRDVL 179
             RPQTWAER LRT      D  +Y   K D++L+Q L  S + Y  H+K + N++Y  VL
Sbjct:   124 RPQTWAERVLRTRNISGSDIDSYAPAKRDKQLIQTLAASIRTYNYHTKAYINQRYASVL 182


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.317   0.132   0.412    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      186       172   0.00093  108 3  11 22  0.43    32
                                                     31  0.48    34


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  594 (63 KB)
  Total size of DFA:  175 KB (2101 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:01
  No. of threads or processors used:  24
  Search cpu time:  18.22u 0.07s 18.29t   Elapsed:  00:00:18
  Total cpu time:  18.22u 0.07s 18.29t   Elapsed:  00:00:19
  Start:  Thu Aug 15 11:31:33 2013   End:  Thu Aug 15 11:31:52 2013

GO:0031672 "A band" evidence=IDA

GO:0005863 "striated muscle myosin thick filament" evidence=IDA

GO:0030241 "skeletal muscle myosin thick filament assembly" evidence=IMP

GO:0043292 "contractile fiber" evidence=NAS

GO:0071688 "striated muscle myosin thick filament assembly" evidence=IDA

GO:0007527 "adult somatic muscle development" evidence=IMP

GO:0045214 "sarcomere organization" evidence=IMP

GO:0014703 "oscillatory muscle contraction" evidence=IMP

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

No hit with probability above 80.00

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	186
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-09

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 55.2 bits (132), Expect = 2e-09
 Identities = 35/197 (17%), Positives = 60/197 (30%), Gaps = 46/197 (23%)

Query: 5   WADDGGFSWDDVEAIEEPKAQRSLPPKQLRVLAGAPAEKKPEETQAR--DI---GAQKDS 59
           W D       DV  +     + SL             EK+P+E+      I      K  
Sbjct: 396 WFDV---IKSDVMVVVNKLHKYSL------------VEKQPKESTISIPSIYLELKVKLE 440

Query: 60  EIQALH--FPKKRDIKKTREFHHWVRPTRLQYRYNYDYAHNYYDDVIHYLNSKSQGGHVT 117
              ALH       +I KT +    + P   QY Y++         + H+L +      +T
Sbjct: 441 NEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSH---------IGHHLKNIEHPERMT 491

Query: 118 ELPRPQT---WAERALRTYTKDWP----------DTATYEK--TKADEELLQKLRFSGKF 162
                     + E+ +R  +  W               Y+      D +  + +     F
Sbjct: 492 LFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYICDNDPKYERLVNAILDF 551

Query: 163 YAQHSKEFYNRKYRDVL 179
             +  +     KY D+L
Sbjct: 552 LPKIEENLICSKYTDLL 568

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00