Psyllid ID: psy7249

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-
Protein Sequence
EAKSKSGRESQRRKTPRFYAVVKDPESSSRTKGVKRKTRHSQDPPVEHHVGWILDVKEHRPRTSSEAKAKSGRESQRRKTPRFYAVVKDPESSSRTKGVKRKTRHSQDPPVEHHVGWILDVKEHRPRTSSVSSTGTSPCSSVPNSLPSFQHPSHALLKERHFTQEAYHKYHSRCLRERSRLGPGKSQEMNTLYRFWSFFLRDNFNRNMYKEFRSLAREDASLGFRYGYECLFRYFSYGLEKKFRPELYEDFQIETIHDYEN
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEcccccccccccccccccccccccccccccccccccHHHHHHcccHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
cccccccccccccccccEEEEcccccccccccccccccccccccccccEEEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEccccccccccccccccccccccccccccccccccHHHHHHccccHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHcHHHcccHHHHHHHHHHHHHHHcc
Coil and Loop (DISEMBL)
eaksksgresqrrktprfyavvkdpesssrtkgvkrktrhsqdppvehhvgwildvkehrprtsseakaksgresqrrktprfyavvkdpesssrtkgvkrktrhsqdppvehhvgwildvkehrprtssvsstgtspcssvpnslpsfqhpshallkeRHFTQEAYHKYHSRClrersrlgpgksqemnTLYRFWSFFLRDNFNRNMYKEFRSLAREDASLGFRYGYECLFRYFSyglekkfrpelyedfqietihdyen
Flexible Loop (DISEMBL)
eaksksgresqrrktprfyavvkdpesssrtkgvkrktrhsqdppvehhvgwildvkehrprtsseakaksgresqrrktprfyavvkdpesssrtkgvkrktrhsqdppvehhvgwildvkehrprtssvsstgtspcssvPNSLPSFQHPSHALLKERHFTQEAYHKYHSrclrersrlgpgksqemNTLYRFWSFFLRDNFNRNMYKEFRSLAREDASLGFRYGYECLFRYFSYGLEKKFRPELYEDFQIETIHDYEN
Low Complexity Region (SEG)
EAKSKSGRESQRRKTPRFYAVVKDPESSSRTKGVKRKTRHSQDPPVEHHVGWILDVKEHRPRTSSEAKAKSGRESQRRKTPRFYAVVKDPESSSRTKGVKRKTRHSQDPPVEHHVGWILDVKEHrprtssvsstgtspcssvpNSLPSFQHPSHALLKERHFTQEAYHKYHSRCLRERSRLGPGKSQEMNTLYRFWSFFLRDNFNRNMYKEFRSLAREDASLGFRYGYECLFRYFSYGLEKKFRPELYEDFQIETIHDYEN
Disordered region (IsUnstruct)
************************************************HVGWILD**********************************************************HVGWILDV****************************************FTQEAYHKYHSRCL*************MNTLYRFWSFFLRDNFNRNMYKEFRSLAREDASLGFRYGYECLFRYFSYGLEKKFRPELYEDFQIETIH****
Disordered Region (DISOPRED)
*****************************************************************************************************************************************************************FTQEAYHKYHSRCLR**S******SQEMNTLYRFWSFFLRDNFNRNMYKEFRSLAREDASLGFRYGYECLFRYFSYGLEKKFRPELYEDFQIETIHD***
Disordered Region (DISEMBL)
***************PRFYAVV**********************PVEHHVGWILDVKE*********************TPRFYAVV**********************PVEHHVGWILDVKE********************NSLPSFQHPSHALLKERHFTQEAYHKYHSRCLRERSRLGPGKSQEMNTLYRFWSFFLRDNFNRNMYKEFRSLAREDASLGFRYGYECLFRYFSYGLEKKFRPELYEDFQIETIHDYEN
Disordered Region (DISPRO)
**************TPRFY**VKDPE***************QDPPVEHHVGWILDVK***************************************************PPVEH***WI***KEHR******************NSLPSFQHPSHALLKERHFTQEAYHKYHSRCLRERSRLGPGKSQEMNTLYRFWSFFLRDNFNRNMYKEFRSLAREDASLGFRYGYECLFRYFSYGLEKKFRPELYEDFQIETIHDYEN
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
EAKSKSGRESQRRKTPRFYAVVKDPESSSRTKGVKRKTRHSQDPPVEHHVGWILDVKEHRPRTSSEAKAKSGRESQRRKTPRFYAVVKDPESSSRTKGVKRKTRHSQDPPVEHHVGWILDVKEHRPRTSSVSSTGTSPCSSVPNSLPSFQHPSHALLKERHFTQEAYHKYHSRCLRERSRLGPGKSQEMNTLYRFWSFFLRDNFNRNMYKEFRSLAREDASLGFRYGYECLFRYFSYGLEKKFRPELYEDFQIETIHDYEN
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	261	2.2.26 [Sep-21-2011]
Q9VAW5	1673	La-related protein OS=Dro	yes	N/A	0.681	0.106	0.702	9e-73
Q6ZQ58	1072	La-related protein 1 OS=M	yes	N/A	0.697	0.169	0.632	9e-66
Q6PKG0	1096	La-related protein 1 OS=H	yes	N/A	0.697	0.166	0.627	2e-64
Q659C4	914	La-related protein 1B OS=	no	N/A	0.697	0.199	0.607	3e-63

>sp|Q9VAW5|LARP_DROME La-related protein OS=Drosophila melanogaster GN=larp PE=1 SV=5

 Score =  273 bits (698), Expect = 9e-73,   Method: Compositional matrix adjust.
 Identities = 132/188 (70%), Positives = 147/188 (78%), Gaps = 10/188 (5%)

Query: 82   RFYAVVKDPESSSRTKGVKRKTRHSQDPPVEHHVGWILDVKEHRPRTSSV-SSTGTSPC- 139
            RFYA         RT   KRK RH+ +PPVE HVGW+LD  EHRPRT+S+ SS GTSP  
Sbjct: 1254 RFYAAPNSHSIDPRTP-RKRKLRHTANPPVEAHVGWLLDTVEHRPRTTSMGSSAGTSPTA 1312

Query: 140  -------SSVPNSLPSFQHPSHALLKERHFTQEAYHKYHSRCLRERSRLGPGKSQEMNTL 192
                   SSVP SLP FQHPSHALLKE +FTQ+AYHKYHSRCL+ER RLG G+SQEMNTL
Sbjct: 1313 SSYGSFGSSVPQSLPVFQHPSHALLKENNFTQQAYHKYHSRCLKERRRLGYGQSQEMNTL 1372

Query: 193  YRFWSFFLRDNFNRNMYKEFRSLAREDASLGFRYGYECLFRYFSYGLEKKFRPELYEDFQ 252
            YRFWSFFLR+NFN++MY EFRSLA EDA  GFRYG ECLFR+FSYGLEKKFRP +Y+DFQ
Sbjct: 1373 YRFWSFFLRENFNKSMYNEFRSLALEDAGNGFRYGLECLFRFFSYGLEKKFRPNIYQDFQ 1432

Query: 253  IETIHDYE 260
             ETI DYE
Sbjct: 1433 DETIADYE 1440

Drosophila melanogaster (taxid: 7227)

>sp|Q6ZQ58|LARP1_MOUSE La-related protein 1 OS=Mus musculus GN=Larp1 PE=1 SV=2

 Score =  250 bits (638), Expect = 9e-66,   Method: Compositional matrix adjust.
 Identities = 119/188 (63%), Positives = 143/188 (76%), Gaps = 6/188 (3%)

Query: 79  KTPRFYAVVKDPESSSRTKGVKRKTRHSQDPPVEHHVGWILDVKEHRPRTSSVSST---G 135
           +TPRFY VVK+  +       KRKTRHS +PP+E HVGW++D +EHRPRT+S+SS+   G
Sbjct: 773 QTPRFYPVVKEGRTLDAKMPRKRKTRHSSNPPLESHVGWVMDSREHRPRTASISSSPSEG 832

Query: 136 TSPCSS---VPNSLPSFQHPSHALLKERHFTQEAYHKYHSRCLRERSRLGPGKSQEMNTL 192
           T    S    P SLP FQHPSH LLKE  FTQ  YHKY  RCL ER RLG G+SQEMNTL
Sbjct: 833 TPAVGSYGCTPQSLPKFQHPSHELLKENGFTQHVYHKYRRRCLNERKRLGIGQSQEMNTL 892

Query: 193 YRFWSFFLRDNFNRNMYKEFRSLAREDASLGFRYGYECLFRYFSYGLEKKFRPELYEDFQ 252
           +RFWSFFLRD+FN+ MY+EF+ LA EDA  G+RYG ECLFRY+SYGLEKKFR ++++DFQ
Sbjct: 893 FRFWSFFLRDHFNKKMYEEFKQLALEDAKEGYRYGLECLFRYYSYGLEKKFRLDIFKDFQ 952

Query: 253 IETIHDYE 260
            ET+ DYE
Sbjct: 953 EETVKDYE 960

Mus musculus (taxid: 10090)

>sp|Q6PKG0|LARP1_HUMAN La-related protein 1 OS=Homo sapiens GN=LARP1 PE=1 SV=2

 Score =  246 bits (627), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 118/188 (62%), Positives = 142/188 (75%), Gaps = 6/188 (3%)

Query: 79  KTPRFYAVVKDPESSSRTKGVKRKTRHSQDPPVEHHVGWILDVKEHRPRTSSVSST---G 135
           +T RFY VVK+  +       KRKTRHS +PP+E HVGW++D +EHRPRT+S+SS+   G
Sbjct: 796 QTSRFYPVVKEGRTLDAKMPRKRKTRHSSNPPLESHVGWVMDSREHRPRTASISSSPSEG 855

Query: 136 TSPCSS---VPNSLPSFQHPSHALLKERHFTQEAYHKYHSRCLRERSRLGPGKSQEMNTL 192
           T    S    P SLP FQHPSH LLKE  FTQ  YHKY  RCL ER RLG G+SQEMNTL
Sbjct: 856 TPTVGSYGCTPQSLPKFQHPSHELLKENGFTQHVYHKYRRRCLNERKRLGIGQSQEMNTL 915

Query: 193 YRFWSFFLRDNFNRNMYKEFRSLAREDASLGFRYGYECLFRYFSYGLEKKFRPELYEDFQ 252
           +RFWSFFLRD+FN+ MY+EF+ LA EDA  G+RYG ECLFRY+SYGLEKKFR ++++DFQ
Sbjct: 916 FRFWSFFLRDHFNKKMYEEFKQLALEDAKEGYRYGLECLFRYYSYGLEKKFRLDIFKDFQ 975

Query: 253 IETIHDYE 260
            ET+ DYE
Sbjct: 976 EETVKDYE 983

Homo sapiens (taxid: 9606)

>sp|Q659C4|LAR1B_HUMAN La-related protein 1B OS=Homo sapiens GN=LARP1B PE=1 SV=2

 Score =  241 bits (615), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 116/191 (60%), Positives = 140/191 (73%), Gaps = 9/191 (4%)

Query: 79  KTPRFYAVVKDPESSSRTKGVKRKTRHSQDPPVEHHVGWILDVKEHRPRTSSVSSTGTSP 138
           KTPRFY VVK+P++       KRKTRHS +PP+E HVGW++D ++  P TSSVS++  SP
Sbjct: 615 KTPRFYPVVKEPKAIDVKSPRKRKTRHSTNPPLECHVGWVMDSRDRGPGTSSVSTSNASP 674

Query: 139 C---------SSVPNSLPSFQHPSHALLKERHFTQEAYHKYHSRCLRERSRLGPGKSQEM 189
                        P+S P FQHPSH LLKE  FTQ+ YHKY  RCL ER RLG G+SQEM
Sbjct: 675 SEGAPLAGSYGCTPHSFPKFQHPSHELLKENGFTQQVYHKYRRRCLSERKRLGIGQSQEM 734

Query: 190 NTLYRFWSFFLRDNFNRNMYKEFRSLAREDASLGFRYGYECLFRYFSYGLEKKFRPELYE 249
           NTL+RFWSFFLRD+FN+ MY+EFR LA EDA   +RYG ECLFR++SYGLEKKFR E+++
Sbjct: 735 NTLFRFWSFFLRDHFNKKMYEEFRQLAWEDAKENYRYGLECLFRFYSYGLEKKFRREIFQ 794

Query: 250 DFQIETIHDYE 260
           DFQ ET  DYE
Sbjct: 795 DFQEETKKDYE 805


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.316    0.131    0.395 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 102,695,835
Number of Sequences: 539616
Number of extensions: 4220747
Number of successful extensions: 11251
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 50
Number of HSP's that attempted gapping in prelim test: 11149
Number of HSP's gapped (non-prelim): 126
length of query: 261
length of database: 191,569,459
effective HSP length: 115
effective length of query: 146
effective length of database: 129,513,619
effective search space: 18908988374
effective search space used: 18908988374
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 60 (27.7 bits)

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	261
383855520	1368	PREDICTED: la-related protein 1-like [Me	0.812	0.154	0.64	2e-76
357608931	861	lupus la ribonucleoprotein [Danaus plexi	0.750	0.227	0.665	2e-75
380020228	1326	PREDICTED: LOW QUALITY PROTEIN: la-relat	0.739	0.145	0.661	4e-75
350397469	1371	PREDICTED: la-related protein 1-like [Bo	0.731	0.139	0.685	1e-74
328782230	1369	PREDICTED: la-related protein 1 [Apis me	0.739	0.140	0.663	3e-74
312378999	1760	hypothetical protein AND_09263 [Anophele	0.773	0.114	0.652	3e-74
340715252	1375	PREDICTED: la-related protein 1-like [Bo	0.720	0.136	0.685	6e-74
307204725	1442	La-related protein [Harpegnathos saltato	0.689	0.124	0.693	3e-73
345481592	1336	PREDICTED: la-related protein 1-like [Na	0.704	0.137	0.683	4e-73
158287017	1923	AGAP005291-PA [Anopheles gambiae str. PE	0.685	0.093	0.708	4e-73

>gi|383855520|ref|XP_003703258.1| PREDICTED: la-related protein 1-like [Megachile rotundata]

 Score =  291 bits (745), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 144/225 (64%), Positives = 170/225 (75%), Gaps = 13/225 (5%)

Query: 49   HVGWILDVKEHRPRTSSE----AKAKSGRESQRRKTPRFYAVVKDPESSSRTKGVKRKTR 104
             V   +D +E R R + +     KA++ R  +R   PRF+AVVKD  S       KRKTR
Sbjct: 935  QVPMSIDSQERRDRRTDKNRWNEKARNSRSGRRGVVPRFFAVVKDEPSVDPRTPRKRKTR 994

Query: 105  HSQDPPVEHHVGWILDVKEHRPRT-SSVSSTGTSPC--------SSVPNSLPSFQHPSHA 155
            HS +PPVEHHVGWI+DV+EHRPRT S+ SS GTSP          SVP SLP+FQHPSHA
Sbjct: 995  HSNNPPVEHHVGWIMDVREHRPRTYSTGSSAGTSPNEGFLASSYGSVPQSLPAFQHPSHA 1054

Query: 156  LLKERHFTQEAYHKYHSRCLRERSRLGPGKSQEMNTLYRFWSFFLRDNFNRNMYKEFRSL 215
            LLKE  FTQ+AYHKYHSRCL+ER RLG G+SQEMNTL+RFWSFFLR+NFNR MY+EFRS+
Sbjct: 1055 LLKENGFTQQAYHKYHSRCLKERKRLGIGQSQEMNTLFRFWSFFLRENFNRTMYEEFRSI 1114

Query: 216  AREDASLGFRYGYECLFRYFSYGLEKKFRPELYEDFQIETIHDYE 260
            A+EDAS G+RYG ECLFR++SYGLEK+FR  LY DFQ+ETI DYE
Sbjct: 1115 AKEDASEGYRYGLECLFRFYSYGLEKRFRHHLYRDFQVETIQDYE 1159

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|357608931|gb|EHJ66220.1| lupus la ribonucleoprotein [Danaus plexippus]

 Score =  288 bits (737), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 135/203 (66%), Positives = 161/203 (79%), Gaps = 7/203 (3%)

Query: 65  SEAKAKSGRESQRRKTPRFYAVVKDPESSSRTKGVKRKTRHSQDPPVEHHVGWILDVKEH 124
           +E K + G ++ RR+T RFYA  KDP ++      K KTRHS +PPVEHHVGWI+DV+EH
Sbjct: 517 NEQKTEGGGKAARRRTARFYAASKDPHATDVISSRKHKTRHSLNPPVEHHVGWIMDVREH 576

Query: 125 RP--RTSSVSSTGTSP-----CSSVPNSLPSFQHPSHALLKERHFTQEAYHKYHSRCLRE 177
           R   R S+ SS GTSP     C SVP SLP+F HPSH LL+E HFTQ+AYHKYHSRCL+E
Sbjct: 577 RRQHRDSTGSSLGTSPTLGSSCGSVPQSLPAFHHPSHGLLRENHFTQQAYHKYHSRCLKE 636

Query: 178 RSRLGPGKSQEMNTLYRFWSFFLRDNFNRNMYKEFRSLAREDASLGFRYGYECLFRYFSY 237
           R +LG G+SQEMNTL+RFWSFFLRD+FNR MY EFRSLA EDA+ GFRYG ECLFR++SY
Sbjct: 637 RKKLGIGQSQEMNTLFRFWSFFLRDHFNRTMYNEFRSLATEDAAAGFRYGLECLFRFYSY 696

Query: 238 GLEKKFRPELYEDFQIETIHDYE 260
           GLE+KFRPELY+ FQ+ET+ DYE
Sbjct: 697 GLERKFRPELYQHFQVETLADYE 719

Source: Danaus plexippus

Species: Danaus plexippus

Genus: Danaus

Family: Nymphalidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380020228|ref|XP_003693993.1| PREDICTED: LOW QUALITY PROTEIN: la-related protein 1-like [Apis florea]

 Score =  287 bits (734), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 133/201 (66%), Positives = 158/201 (78%), Gaps = 8/201 (3%)

Query: 68   KAKSGRESQRRKTPRFYAVVKDPESSSRTKGVKRKTRHSQDPPVEHHVGWILDVKEHRPR 127
            K+++ R  +R   PRF+AVVKD  S       KRKTRHS +PPVEHHVGWI+DV+EHRPR
Sbjct: 914  KSRNSRNGRRGVVPRFFAVVKDEPSVDPRTPRKRKTRHSNNPPVEHHVGWIMDVREHRPR 973

Query: 128  TSSVSSTGTSPC--------SSVPNSLPSFQHPSHALLKERHFTQEAYHKYHSRCLRERS 179
            T S  S GTSP          S P SLP+F HPSHALLKE  FTQ+ YHKYHSRCL+ER 
Sbjct: 974  TYSTGSAGTSPNEGYLASSYGSAPQSLPTFHHPSHALLKENGFTQQVYHKYHSRCLKERK 1033

Query: 180  RLGPGKSQEMNTLYRFWSFFLRDNFNRNMYKEFRSLAREDASLGFRYGYECLFRYFSYGL 239
            RLG G+SQEMNTL+RFWSFFLR+NFNR MY+EFR++A+EDAS G+RYG ECLFR++SYGL
Sbjct: 1034 RLGIGQSQEMNTLFRFWSFFLRENFNRTMYEEFRTVAKEDASEGYRYGLECLFRFYSYGL 1093

Query: 240  EKKFRPELYEDFQIETIHDYE 260
            EK+FR +LY+DFQ+ETI DYE
Sbjct: 1094 EKRFRHDLYKDFQVETIQDYE 1114

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350397469|ref|XP_003484887.1| PREDICTED: la-related protein 1-like [Bombus impatiens]

 Score =  285 bits (729), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 137/200 (68%), Positives = 159/200 (79%), Gaps = 9/200 (4%)

Query: 70   KSGRESQRRKTPRFYAVVKDPESSSRTKGVKRKTRHSQDPPVEHHVGWILDVKEHRPRT- 128
            KS R+S+R   PRF+AVVKD  S       KRKTRHS +PPVEHHVGWI+DV+EHRPRT 
Sbjct: 959  KSRRDSRRGVVPRFFAVVKDEPSVDPRTPRKRKTRHSNNPPVEHHVGWIMDVREHRPRTY 1018

Query: 129  SSVSSTGTSPC--------SSVPNSLPSFQHPSHALLKERHFTQEAYHKYHSRCLRERSR 180
            S+ SSTGTSP          S P SLP F HPSHALLKE  FTQ+ YHKYHSRCL+ER R
Sbjct: 1019 STGSSTGTSPNEGYLASSYGSAPQSLPIFHHPSHALLKENGFTQQVYHKYHSRCLKERKR 1078

Query: 181  LGPGKSQEMNTLYRFWSFFLRDNFNRNMYKEFRSLAREDASLGFRYGYECLFRYFSYGLE 240
            LG G+SQEMNTL+RFWSFFLR+NFNR MY+EFR++A+EDAS G+RYG ECLFR++SYGLE
Sbjct: 1079 LGIGQSQEMNTLFRFWSFFLRENFNRTMYEEFRTVAKEDASEGYRYGLECLFRFYSYGLE 1138

Query: 241  KKFRPELYEDFQIETIHDYE 260
            K+FR  LY+DFQ+ETI DYE
Sbjct: 1139 KRFRHHLYKDFQVETIQDYE 1158

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328782230|ref|XP_001120391.2| PREDICTED: la-related protein 1 [Apis mellifera]

 Score =  284 bits (726), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 134/202 (66%), Positives = 160/202 (79%), Gaps = 9/202 (4%)

Query: 68   KAKSGRESQRRKTPRFYAVVKDPESSSRTKGVKRKTRHSQDPPVEHHVGWILDVKEHRPR 127
            K+++ R  +R   PRF+AVVKD  S       KRKTRHS +PPVEHHVGWI+DV+EHRPR
Sbjct: 958  KSRNSRNGRRGVVPRFFAVVKDEPSVDPRTPRKRKTRHSNNPPVEHHVGWIMDVREHRPR 1017

Query: 128  T-SSVSSTGTSPC--------SSVPNSLPSFQHPSHALLKERHFTQEAYHKYHSRCLRER 178
            T S+ SS GTSP          S P SLP+F HPSHALLKE  FTQ+ YHKYHSRCL+ER
Sbjct: 1018 TYSTGSSAGTSPNEGYLASSYGSAPQSLPTFHHPSHALLKENGFTQQVYHKYHSRCLKER 1077

Query: 179  SRLGPGKSQEMNTLYRFWSFFLRDNFNRNMYKEFRSLAREDASLGFRYGYECLFRYFSYG 238
             RLG G+SQEMNTL+RFWSFFLR+NFNR MY+EFR++A+EDAS G+RYG ECLFR++SYG
Sbjct: 1078 KRLGIGQSQEMNTLFRFWSFFLRENFNRTMYEEFRTVAKEDASEGYRYGLECLFRFYSYG 1137

Query: 239  LEKKFRPELYEDFQIETIHDYE 260
            LEK+FR +LY+DFQ+ETI DYE
Sbjct: 1138 LEKRFRHDLYKDFQVETIQDYE 1159

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|312378999|gb|EFR25417.1| hypothetical protein AND_09263 [Anopheles darlingi]

 Score =  284 bits (726), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 141/216 (65%), Positives = 162/216 (75%), Gaps = 14/216 (6%)

Query: 51   GWILDVKEHRPRTSSEAKAKSGRESQRRKTPRFYAVVKDPESSSRTKGVKRKTRHSQDPP 110
            G  LDV       S +  A +   S R K  RFYAV KD E        KRKTRH  +PP
Sbjct: 1427 GLSLDV-------SLDLNASTASTSNRHKA-RFYAVNKD-EFVDPITPRKRKTRHLNNPP 1477

Query: 111  VEHHVGWILDVKEHRPRTSSV-SSTGTSPCSS----VPNSLPSFQHPSHALLKERHFTQE 165
            VE HVGW+LD  EHRPRT+S+ SS GTSP +S    +P+SLP FQHPSHALLKE  FTQ+
Sbjct: 1478 VESHVGWVLDAVEHRPRTTSIGSSAGTSPTASSYGSLPHSLPVFQHPSHALLKENGFTQQ 1537

Query: 166  AYHKYHSRCLRERSRLGPGKSQEMNTLYRFWSFFLRDNFNRNMYKEFRSLAREDASLGFR 225
             YHKYHSRCL+ER R+GPG+SQEMNTL+RFWSFFLR+NFN+NMY EFR LA +DAS GFR
Sbjct: 1538 VYHKYHSRCLKERKRMGPGQSQEMNTLFRFWSFFLRENFNKNMYNEFRQLAIDDASEGFR 1597

Query: 226  YGYECLFRYFSYGLEKKFRPELYEDFQIETIHDYEN 261
            YG ECLFR++SYGLEKKFRP+LYEDFQ ET+ DYEN
Sbjct: 1598 YGLECLFRFYSYGLEKKFRPQLYEDFQQETMVDYEN 1633

Source: Anopheles darlingi

Species: Anopheles darlingi

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340715252|ref|XP_003396131.1| PREDICTED: la-related protein 1-like [Bombus terrestris]

 Score =  283 bits (723), Expect = 6e-74,   Method: Compositional matrix adjust.
 Identities = 135/197 (68%), Positives = 157/197 (79%), Gaps = 9/197 (4%)

Query: 73   RESQRRKTPRFYAVVKDPESSSRTKGVKRKTRHSQDPPVEHHVGWILDVKEHRPRT-SSV 131
            R+S+R   PRF+AVVKD  S       KRKTRHS +PPVEHHVGWI+DV+EHRPRT S+ 
Sbjct: 967  RDSRRGVVPRFFAVVKDEPSVDPRTPRKRKTRHSNNPPVEHHVGWIMDVREHRPRTYSTG 1026

Query: 132  SSTGTSPC--------SSVPNSLPSFQHPSHALLKERHFTQEAYHKYHSRCLRERSRLGP 183
            SSTGTSP          S P SLP F HPSHALLKE  FTQ+ YHKYHSRCL+ER RLG 
Sbjct: 1027 SSTGTSPNEGYLASSYGSAPQSLPIFHHPSHALLKENGFTQQVYHKYHSRCLKERKRLGI 1086

Query: 184  GKSQEMNTLYRFWSFFLRDNFNRNMYKEFRSLAREDASLGFRYGYECLFRYFSYGLEKKF 243
            G+SQEMNTL+RFWSFFLR+NFNR MY+EFR++A+EDAS G+RYG ECLFR++SYGLEK+F
Sbjct: 1087 GQSQEMNTLFRFWSFFLRENFNRTMYEEFRTVAKEDASEGYRYGLECLFRFYSYGLEKRF 1146

Query: 244  RPELYEDFQIETIHDYE 260
            R  LY+DFQ+ETI DYE
Sbjct: 1147 RHHLYKDFQVETIQDYE 1163

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307204725|gb|EFN83306.1| La-related protein [Harpegnathos saltator]

 Score =  280 bits (717), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 131/189 (69%), Positives = 155/189 (82%), Gaps = 9/189 (4%)

Query: 81   PRFYAVVKDPESSSRTKGVKRKTRHSQDPPVEHHVGWILDVKEHRPRT-SSVSSTGTSPC 139
            PRF+AVVKD  S       KRKTRHS +PPVEHHVGWI+DV+EHRPRT S+ SS GTSP 
Sbjct: 1051 PRFFAVVKDGPSVDPRTPRKRKTRHSNNPPVEHHVGWIMDVREHRPRTYSTGSSAGTSPN 1110

Query: 140  --------SSVPNSLPSFQHPSHALLKERHFTQEAYHKYHSRCLRERSRLGPGKSQEMNT 191
                     SVP +LP+FQHPSHALLKE  FTQ+ YHKYHSRC++ER RLG G+SQEMNT
Sbjct: 1111 EGYLSSSYGSVPQALPTFQHPSHALLKENGFTQQVYHKYHSRCMKERKRLGIGQSQEMNT 1170

Query: 192  LYRFWSFFLRDNFNRNMYKEFRSLAREDASLGFRYGYECLFRYFSYGLEKKFRPELYEDF 251
            L+RFWSFFLR+NFNR MY+EFR++A+EDAS G+RYG ECLFR++SYGLEKKF+  LY+DF
Sbjct: 1171 LFRFWSFFLRENFNRTMYEEFRTIAKEDASEGYRYGLECLFRFYSYGLEKKFKHPLYKDF 1230

Query: 252  QIETIHDYE 260
            Q+ETI+DYE
Sbjct: 1231 QVETIYDYE 1239

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|345481592|ref|XP_001605854.2| PREDICTED: la-related protein 1-like [Nasonia vitripennis]

 Score =  280 bits (717), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 132/193 (68%), Positives = 154/193 (79%), Gaps = 9/193 (4%)

Query: 77   RRKTPRFYAVVKDPESSSRTKGVKRKTRHSQDPPVEHHVGWILDVKEHRPRT-SSVSSTG 135
            RR  PRF+AVVKD  +       KRKTRHS +PPVEHHVGWI+DV+EHRPRT S+ SSTG
Sbjct: 973  RRAVPRFFAVVKDEPAVDPRTPRKRKTRHSNNPPVEHHVGWIMDVREHRPRTYSTGSSTG 1032

Query: 136  TSPC--------SSVPNSLPSFQHPSHALLKERHFTQEAYHKYHSRCLRERSRLGPGKSQ 187
            TSP          S P SLP+FQHPSH+LLKE  FTQ+ YHKYHSRCL+ER RLG G+SQ
Sbjct: 1033 TSPNEGFLASSYGSAPQSLPTFQHPSHSLLKENGFTQQVYHKYHSRCLKERKRLGIGQSQ 1092

Query: 188  EMNTLYRFWSFFLRDNFNRNMYKEFRSLAREDASLGFRYGYECLFRYFSYGLEKKFRPEL 247
            EMNTL+RFWSFFLR+NFNR MY+EFR++A EDA  G+RYG ECLFR++SYGLEKKFR +L
Sbjct: 1093 EMNTLFRFWSFFLRENFNRTMYEEFRTIAYEDACEGYRYGLECLFRFYSYGLEKKFRAQL 1152

Query: 248  YEDFQIETIHDYE 260
            Y+DFQ ET+ DYE
Sbjct: 1153 YKDFQAETLKDYE 1165

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|158287017|ref|XP_001237175.2| AGAP005291-PA [Anopheles gambiae str. PEST] gi|157019812|gb|EAU77581.2| AGAP005291-PA [Anopheles gambiae str. PEST]

 Score =  280 bits (717), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 131/185 (70%), Positives = 150/185 (81%), Gaps = 6/185 (3%)

Query: 82   RFYAVVKDPESSSRTKGVKRKTRHSQDPPVEHHVGWILDVKEHRPRTSSV-SSTGTSPCS 140
            RFYAV KD E        KRKTRH  +PPVE HVGW+LD  EHRPRT+S+ SS GTSP +
Sbjct: 1473 RFYAVNKD-EFVDPITPRKRKTRHLNNPPVESHVGWVLDAVEHRPRTTSIGSSAGTSPTA 1531

Query: 141  S----VPNSLPSFQHPSHALLKERHFTQEAYHKYHSRCLRERSRLGPGKSQEMNTLYRFW 196
            S    +P+SLP FQHPSHALLKE  FTQ+ YHKYHSRCL+ER R+GPG+SQEMNTL+RFW
Sbjct: 1532 SSYGSLPHSLPVFQHPSHALLKENGFTQQVYHKYHSRCLKERKRMGPGQSQEMNTLFRFW 1591

Query: 197  SFFLRDNFNRNMYKEFRSLAREDASLGFRYGYECLFRYFSYGLEKKFRPELYEDFQIETI 256
            SFFLR+NFN+NMY EFR LA EDA+ GFRYG ECLFR++SYGLEKKFR +LYEDFQ ET+
Sbjct: 1592 SFFLRENFNKNMYNEFRQLAIEDAAEGFRYGLECLFRFYSYGLEKKFRAQLYEDFQHETV 1651

Query: 257  HDYEN 261
             DYEN
Sbjct: 1652 SDYEN 1656

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	261
FB|FBgn0261618	1673	larp "La related protein" [Dro	0.701	0.109	0.606	3.4e-58
UNIPROTKB|F1P339	927	LARP1 "Uncharacterized protein	0.697	0.196	0.579	5.4e-58
MGI|MGI:1890165	1072	Larp1 "La ribonucleoprotein do	0.747	0.181	0.553	5.4e-58
RGD|1306683	1024	Larp1 "La ribonucleoprotein do	0.747	0.190	0.548	2.8e-57
UNIPROTKB|Q6PKG0	1096	LARP1 "La-related protein 1" [	0.747	0.177	0.548	2.6e-56
UNIPROTKB|F1MZU1	951	LARP1 "Uncharacterized protein	0.747	0.205	0.548	5.7e-55
UNIPROTKB|Q659C4	914	LARP1B "La-related protein 1B"	0.762	0.217	0.524	4.4e-54
WB|WBGene00020097	1150	larp-1 [Caenorhabditis elegans	0.766	0.173	0.438	9.9e-40

FB|FBgn0261618 larp "La related protein" [Drosophila melanogaster (taxid:7227)]

 Score = 601 (216.6 bits), Expect = 3.4e-58, Sum P(2) = 3.4e-58
 Identities = 117/193 (60%), Positives = 132/193 (68%)

Query:    77 RRKTPRFYAVVKDPESSSRTKGVKRKTRHSQDPPVEHHVGWILDVKEHXXXXXXXXXXXX 136
             + +  RFYA         RT   KRK RH+ +PPVE HVGW+LD  EH            
Sbjct:  1249 KSRRARFYAAPNSHSIDPRTPR-KRKLRHTANPPVEAHVGWLLDTVEHRPRTTSMGSSAG 1307

Query:   137 XXXXXXX---------NSLPSFQHPSHALLKERHFTQEAYHKYHSRCLRERSRLGPGKSQ 187
                              SLP FQHPSHALLKE +FTQ+AYHKYHSRCL+ER RLG G+SQ
Sbjct:  1308 TSPTASSYGSFGSSVPQSLPVFQHPSHALLKENNFTQQAYHKYHSRCLKERRRLGYGQSQ 1367

Query:   188 EMNTLYRFWSFFLRDNFNRNMYKEFRSLAREDASLGFRYGYECLFRYFSYGLEKKFRPEL 247
             EMNTLYRFWSFFLR+NFN++MY EFRSLA EDA  GFRYG ECLFR+FSYGLEKKFRP +
Sbjct:  1368 EMNTLYRFWSFFLRENFNKSMYNEFRSLALEDAGNGFRYGLECLFRFFSYGLEKKFRPNI 1427

Query:   248 YEDFQIETIHDYE 260
             Y+DFQ ETI DYE
Sbjct:  1428 YQDFQDETIADYE 1440

GO:0005737 "cytoplasm" evidence=IDA

GO:0035071 "salivary gland cell autophagic cell death" evidence=IEP

GO:0048102 "autophagic cell death" evidence=IEP

GO:0003674 "molecular_function" evidence=ND

GO:0005829 "cytosol" evidence=IDA

GO:0051225 "spindle assembly" evidence=IMP

GO:0007076 "mitotic chromosome condensation" evidence=IMP

GO:0051299 "centrosome separation" evidence=IMP

GO:0007053 "spindle assembly involved in male meiosis" evidence=IMP

GO:0005739 "mitochondrion" evidence=IDA

GO:0007140 "male meiosis" evidence=IMP

GO:0000001 "mitochondrion inheritance" evidence=IMP

GO:0035186 "syncytial blastoderm mitotic cell cycle" evidence=IMP

UNIPROTKB|F1P339 LARP1 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 584 (210.6 bits), Expect = 5.4e-58, Sum P(2) = 5.4e-58
 Identities = 109/188 (57%), Positives = 130/188 (69%)

Query:    79 KTPRFYAVVKDPESSSRTKGVKRKTRHSQDPPVEHHVGWILDVKEHXXXXXXXXXXXXXX 138
             +TPRFY VVK+  +       KRKTRHS +PP+E HVGW++D +EH              
Sbjct:   626 QTPRFYPVVKEGRTIDAKTPRKRKTRHSSNPPMECHVGWVMDSREHRPRTASISSSPSEG 685

Query:   139 XXXXXN------SLPSFQHPSHALLKERHFTQEAYHKYHSRCLRERSRLGPGKSQEMNTL 192
                  +      SLP FQHPSH LLKE  FTQ  YHKY  RCL ER RLG G+SQEMNTL
Sbjct:   686 TPAVGSYGCTPQSLPKFQHPSHELLKENGFTQHVYHKYRRRCLNERKRLGIGQSQEMNTL 745

Query:   193 YRFWSFFLRDNFNRNMYKEFRSLAREDASLGFRYGYECLFRYFSYGLEKKFRPELYEDFQ 252
             +RFWSFFLRD+FN+ MY+EF+ LA ED   G+RYG ECLFRY+SYGLEKKFRP++++DFQ
Sbjct:   746 FRFWSFFLRDHFNKKMYEEFKQLAVEDGKEGYRYGLECLFRYYSYGLEKKFRPDIFKDFQ 805

Query:   253 IETIHDYE 260
              ETI DYE
Sbjct:   806 EETIKDYE 813

GO:0016239 "positive regulation of macroautophagy" evidence=IEA

MGI|MGI:1890165 Larp1 "La ribonucleoprotein domain family, member 1" [Mus musculus (taxid:10090)]

 Score = 582 (209.9 bits), Expect = 5.4e-58, Sum P(2) = 5.4e-58
 Identities = 114/206 (55%), Positives = 136/206 (66%)

Query:    61 PRTSSEAKAKSGRESQRRKTPRFYAVVKDPESSSRTKGVKRKTRHSQDPPVEHHVGWILD 120
             PRT    + K    SQ   TPRFY VVK+  +       KRKTRHS +PP+E HVGW++D
Sbjct:   760 PRTPRTPQLKDS--SQ---TPRFYPVVKEGRTLDAKMPRKRKTRHSSNPPLESHVGWVMD 814

Query:   121 VKEHXXXXXXXXXXXXXXXXXXXN------SLPSFQHPSHALLKERHFTQEAYHKYHSRC 174
              +EH                   +      SLP FQHPSH LLKE  FTQ  YHKY  RC
Sbjct:   815 SREHRPRTASISSSPSEGTPAVGSYGCTPQSLPKFQHPSHELLKENGFTQHVYHKYRRRC 874

Query:   175 LRERSRLGPGKSQEMNTLYRFWSFFLRDNFNRNMYKEFRSLAREDASLGFRYGYECLFRY 234
             L ER RLG G+SQEMNTL+RFWSFFLRD+FN+ MY+EF+ LA EDA  G+RYG ECLFRY
Sbjct:   875 LNERKRLGIGQSQEMNTLFRFWSFFLRDHFNKKMYEEFKQLALEDAKEGYRYGLECLFRY 934

Query:   235 FSYGLEKKFRPELYEDFQIETIHDYE 260
             +SYGLEKKFR ++++DFQ ET+ DYE
Sbjct:   935 YSYGLEKKFRLDIFKDFQEETVKDYE 960

GO:0003674 "molecular_function" evidence=ND

GO:0003723 "RNA binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISA

GO:0016239 "positive regulation of macroautophagy" evidence=ISO

RGD|1306683 Larp1 "La ribonucleoprotein domain family, member 1" [Rattus norvegicus (taxid:10116)]

 Score = 574 (207.1 bits), Expect = 2.8e-57, Sum P(2) = 2.8e-57
 Identities = 113/206 (54%), Positives = 135/206 (65%)

Query:    61 PRTSSEAKAKSGRESQRRKTPRFYAVVKDPESSSRTKGVKRKTRHSQDPPVEHHVGWILD 120
             PRT    + K    SQ   T RFY VVK+  +       KRKTRHS +PP+E HVGW++D
Sbjct:   712 PRTPRTPQLKDS--SQ---TSRFYPVVKEGRTLDAKMPRKRKTRHSSNPPLESHVGWVMD 766

Query:   121 VKEHXXXXXXXXXXXXXXXXXXXN------SLPSFQHPSHALLKERHFTQEAYHKYHSRC 174
              +EH                   +      SLP FQHPSH LLKE  FTQ  YHKY  RC
Sbjct:   767 SREHRPRTASISSSPSEGTPAVGSYGCTPQSLPKFQHPSHELLKENGFTQHVYHKYRRRC 826

Query:   175 LRERSRLGPGKSQEMNTLYRFWSFFLRDNFNRNMYKEFRSLAREDASLGFRYGYECLFRY 234
             L ER RLG G+SQEMNTL+RFWSFFLRD+FN+ MY+EF+ LA EDA  G+RYG ECLFRY
Sbjct:   827 LNERKRLGIGQSQEMNTLFRFWSFFLRDHFNKKMYEEFKQLALEDAKEGYRYGLECLFRY 886

Query:   235 FSYGLEKKFRPELYEDFQIETIHDYE 260
             +SYGLEKKFR ++++DFQ ET+ DYE
Sbjct:   887 YSYGLEKKFRLDIFKDFQEETVKDYE 912

GO:0016239 "positive regulation of macroautophagy" evidence=ISO

UNIPROTKB|Q6PKG0 LARP1 "La-related protein 1" [Homo sapiens (taxid:9606)]

 Score = 574 (207.1 bits), Expect = 2.6e-56, Sum P(2) = 2.6e-56
 Identities = 113/206 (54%), Positives = 135/206 (65%)

Query:    61 PRTSSEAKAKSGRESQRRKTPRFYAVVKDPESSSRTKGVKRKTRHSQDPPVEHHVGWILD 120
             PRT    + K    SQ   T RFY VVK+  +       KRKTRHS +PP+E HVGW++D
Sbjct:   783 PRTPRTPQLKDS--SQ---TSRFYPVVKEGRTLDAKMPRKRKTRHSSNPPLESHVGWVMD 837

Query:   121 VKEHXXXXXXXXXXXXXXXXXXXN------SLPSFQHPSHALLKERHFTQEAYHKYHSRC 174
              +EH                   +      SLP FQHPSH LLKE  FTQ  YHKY  RC
Sbjct:   838 SREHRPRTASISSSPSEGTPTVGSYGCTPQSLPKFQHPSHELLKENGFTQHVYHKYRRRC 897

Query:   175 LRERSRLGPGKSQEMNTLYRFWSFFLRDNFNRNMYKEFRSLAREDASLGFRYGYECLFRY 234
             L ER RLG G+SQEMNTL+RFWSFFLRD+FN+ MY+EF+ LA EDA  G+RYG ECLFRY
Sbjct:   898 LNERKRLGIGQSQEMNTLFRFWSFFLRDHFNKKMYEEFKQLALEDAKEGYRYGLECLFRY 957

Query:   235 FSYGLEKKFRPELYEDFQIETIHDYE 260
             +SYGLEKKFR ++++DFQ ET+ DYE
Sbjct:   958 YSYGLEKKFRLDIFKDFQEETVKDYE 983

GO:0003723 "RNA binding" evidence=IEA

GO:0016239 "positive regulation of macroautophagy" evidence=IMP

UNIPROTKB|F1MZU1 LARP1 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 574 (207.1 bits), Expect = 5.7e-55, P = 5.7e-55
 Identities = 113/206 (54%), Positives = 135/206 (65%)

Query:    61 PRTSSEAKAKSGRESQRRKTPRFYAVVKDPESSSRTKGVKRKTRHSQDPPVEHHVGWILD 120
             PRT    + K    SQ   T RFY VVK+  +       KRKTRHS +PP+E HVGW++D
Sbjct:   640 PRTPRTPQLKDS--SQ---TSRFYPVVKEGRTLDAKTPRKRKTRHSSNPPLESHVGWVMD 694

Query:   121 VKEHXXXXXXXXXXXXXXXXXXXN------SLPSFQHPSHALLKERHFTQEAYHKYHSRC 174
              +EH                   +      SLP FQHPSH LLKE  FTQ  YHKY  RC
Sbjct:   695 SREHRPRTASISSSPSEGTPAVGSYGCTPQSLPKFQHPSHELLKENGFTQHVYHKYRRRC 754

Query:   175 LRERSRLGPGKSQEMNTLYRFWSFFLRDNFNRNMYKEFRSLAREDASLGFRYGYECLFRY 234
             L ER RLG G+SQEMNTL+RFWSFFLRD+FN+ MY+EF+ LA EDA  G+RYG ECLFRY
Sbjct:   755 LNERKRLGIGQSQEMNTLFRFWSFFLRDHFNKKMYEEFKQLALEDAKEGYRYGLECLFRY 814

Query:   235 FSYGLEKKFRPELYEDFQIETIHDYE 260
             +SYGLEKKFR ++++DFQ ET+ DYE
Sbjct:   815 YSYGLEKKFRLDIFKDFQEETVKDYE 840

GO:0016239 "positive regulation of macroautophagy" evidence=IEA

UNIPROTKB|Q659C4 LARP1B "La-related protein 1B" [Homo sapiens (taxid:9606)]

 Score = 565 (203.9 bits), Expect = 4.4e-54, P = 4.4e-54
 Identities = 109/208 (52%), Positives = 135/208 (64%)

Query:    63 TSSEAKAKSGRESQRRKTPRFYAVVKDPESSSRTKGVKRKTRHSQDPPVEHHVGWILDVK 122
             T +    ++ R     KTPRFY VVK+P++       KRKTRHS +PP+E HVGW++D +
Sbjct:   599 TRTPKTPRTPRLQDPNKTPRFYPVVKEPKAIDVKSPRKRKTRHSTNPPLECHVGWVMDSR 658

Query:   123 EHXXXXXXXXXXXXXXXXXXX---------NSLPSFQHPSHALLKERHFTQEAYHKYHSR 173
             +                             +S P FQHPSH LLKE  FTQ+ YHKY  R
Sbjct:   659 DRGPGTSSVSTSNASPSEGAPLAGSYGCTPHSFPKFQHPSHELLKENGFTQQVYHKYRRR 718

Query:   174 CLRERSRLGPGKSQEMNTLYRFWSFFLRDNFNRNMYKEFRSLAREDASLGFRYGYECLFR 233
             CL ER RLG G+SQEMNTL+RFWSFFLRD+FN+ MY+EFR LA EDA   +RYG ECLFR
Sbjct:   719 CLSERKRLGIGQSQEMNTLFRFWSFFLRDHFNKKMYEEFRQLAWEDAKENYRYGLECLFR 778

Query:   234 YFSYGLEKKFRPELYEDFQIETIHDYEN 261
             ++SYGLEKKFR E+++DFQ ET  DYE+
Sbjct:   779 FYSYGLEKKFRREIFQDFQEETKKDYES 806

GO:0003723 "RNA binding" evidence=IEA

WB|WBGene00020097 larp-1 [Caenorhabditis elegans (taxid:6239)]

 Score = 435 (158.2 bits), Expect = 9.9e-40, P = 9.9e-40
 Identities = 92/210 (43%), Positives = 121/210 (57%)

Query:    52 WILDVKEHRPRTSSEAKAK-SGRESQRRKTPRFYAVVKDPESSSRTKGVKRKTRHSQDPP 110
             W    KE    + +  K+    RES+ +K  RFY + K           K+KTRHS+ PP
Sbjct:   899 WTKKAKERAAASVTVPKSPMQRRESEEQKMNRFYPISKPTAPLDAKSPRKKKTRHSEKPP 958

Query:   111 VEHHVGWILDVKEHXXXXXXXXXXXXXXXXXXXNSLPSFQHPSHALLKERHFTQEAYHKY 170
             VE  V W+L  ++                    + +P+  HPS +LL+E  F Q  Y  +
Sbjct:   959 VEMPVAWVLGRED-------ALPAAPIGIAASSSQVPA-NHPSISLLQEDRFVQNVYSTW 1010

Query:   171 HSRCLRERSRLGPGKSQEMNTLYRFWSFFLRDNFNRNMYKEFRSLAREDASLGFRYGYEC 230
                CL++R  LG   + EMNTLYRFWSFFLRDNFNRNMY+EFR LA EDA +G RYG E 
Sbjct:  1011 RQACLKQRKSLGYDCA-EMNTLYRFWSFFLRDNFNRNMYEEFRKLALEDAEIGSRYGIEA 1069

Query:   231 LFRYFSYGLEKKFRPELYEDFQIETIHDYE 260
             LFR++SYGLEKKFRPE+Y++F  +   D +
Sbjct:  1070 LFRFYSYGLEKKFRPEIYKNFMKDVTTDVQ 1099

GO:0009792 "embryo development ending in birth or egg hatching" evidence=IMP

GO:0040010 "positive regulation of growth rate" evidence=IMP

GO:0000003 "reproduction" evidence=IMP

GO:0040035 "hermaphrodite genitalia development" evidence=IMP

GO:0040007 "growth" evidence=IMP

GO:0002119 "nematode larval development" evidence=IMP

GO:0040018 "positive regulation of multicellular organism growth" evidence=IMP

GO:0002009 "morphogenesis of an epithelium" evidence=IMP

GO:0010171 "body morphogenesis" evidence=IMP

GO:0000932 "cytoplasmic mRNA processing body" evidence=IDA

GO:0034046 "poly(G) RNA binding" evidence=IDA

GO:0008266 "poly(U) RNA binding" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q6PKG0	LARP1_HUMAN	No assigned EC number	0.6276	0.6973	0.1660	yes	N/A
Q6ZQ58	LARP1_MOUSE	No assigned EC number	0.6329	0.6973	0.1697	yes	N/A
Q9VAW5	LARP_DROME	No assigned EC number	0.7021	0.6819	0.1063	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	261
smart00684	39	smart00684, DM15, Tandem repeat in fly CG14066 (La	7e-11
smart00684	39	smart00684, DM15, Tandem repeat in fly CG14066 (La	2e-09

>gnl|CDD|128927 smart00684, DM15, Tandem repeat in fly CG14066 (La related protein), human KIAA0731 and worm R144

 Score = 55.5 bits (134), Expect = 7e-11
 Identities = 22/39 (56%), Positives = 27/39 (69%)

Query: 203 NFNRNMYKEFRSLAREDASLGFRYGYECLFRYFSYGLEK 241
           NFN+NMY+EFR L  ED     RY   CL+R++SYGL K
Sbjct: 1   NFNQNMYEEFRQLCLEDRKSLGRYELNCLYRFWSYGLRK 39

7. Unknown function. Length = 39

>gnl|CDD|128927 smart00684, DM15, Tandem repeat in fly CG14066 (La related protein), human KIAA0731 and worm R144

 Score = 52.0 bits (125), Expect = 2e-09
 Identities = 18/42 (42%), Positives = 24/42 (57%), Gaps = 3/42 (7%)

Query: 161 HFTQEAYHKYHSRCLRERSRLGPGKSQEMNTLYRFWSFFLRD 202
           +F Q  Y ++   CL +R  LG     E+N LYRFWS+ LR 
Sbjct: 1   NFNQNMYEEFRQLCLEDRKSLG---RYELNCLYRFWSYGLRK 39

7. Unknown function. Length = 39

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	261
smart00684	39	DM15 Tandem repeat in fly CG14066 (La related prot	99.72
smart00684	39	DM15 Tandem repeat in fly CG14066 (La related prot	99.58

>smart00684 DM15 Tandem repeat in fly CG14066 (La related protein), human KIAA0731 and worm R144

Probab=99.72  E-value=2.6e-18  Score=117.30  Aligned_cols=39  Identities=46%  Similarity=0.985  Sum_probs=36.3

Q ss_pred             CccHHHHHHHHHHHHHhhhhcCCCCcccchhhHHHHHHHHHH
Q psy7249         161 HFTQEAYHKYHSRCLRERSRLGPGKSQEMNTLYRFWSFFLRD  202 (261)
Q Consensus       161 gF~~~~Y~~fr~~aL~eR~~~g~G~s~eMn~LfRFwSyfL~~  202 (261)
                      +||++||++||++||+||++.|   ++|||||||||||||++
T Consensus         1 ~Fn~~~Y~eFr~laled~~~~~---~~gm~~LfRFwsy~L~~   39 (39)
T smart00684        1 NFNQNMYEEFRQLCLEDRKSLG---RYELNCLYRFWSYGLRK   39 (39)
T ss_pred             CchhhHHHHHHHHHHHHHHHcC---ChhHHHHHHHHHhhccC
Confidence            4999999999999999999655   99999999999999985

7. Unknown function.

>smart00684 DM15 Tandem repeat in fly CG14066 (La related protein), human KIAA0731 and worm R144

Probab=99.58  E-value=1.4e-15  Score=103.93  Aligned_cols=39  Identities=56%  Similarity=1.007  Sum_probs=37.5

Q ss_pred             HhhHHHHHHHHHHHHHHhhcccchhHHHHHHHhhhhccc
Q psy7249         203 NFNRNMYKEFRSLAREDASLGFRYGYECLFRYFSYGLEK  241 (261)
Q Consensus       203 ~Fn~~mY~eFr~lAleD~~~g~~YGLE~l~~Fy~y~Lek  241 (261)
                      |||.+||+||+++||||++++..||||||++||+|+|++
T Consensus         1 ~Fn~~~Y~eFr~laled~~~~~~~gm~~LfRFwsy~L~~   39 (39)
T smart00684        1 NFNQNMYEEFRQLCLEDRKSLGRYELNCLYRFWSYGLRK   39 (39)
T ss_pred             CchhhHHHHHHHHHHHHHHHcCChhHHHHHHHHHhhccC
Confidence            799999999999999999998899999999999999975

7. Unknown function.

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00