ECOD: domain e3phdH1

Domain ID e3phdH1

A: a+b two layers
X: beta-Grasp
H: Ubiquitin-related
T: Ubiquitin-like
F: ubiquitin

UID:	001394633
Type:	Automatic domain
Parent:	e2zeqA1
Range:	H:5-76
PDB:	3phd
PDB Description:	POLYUBIQUITIN
UniProt:	P0CG47
Hsap BLAST neighbor:	P62979
Species:	Homo sapiens

Domain
In chain context
In PDB context

Structure of domain e3phdH1

Domains in the same chain:

Download Pymol

e3phdH1	H:5-76	beta-Grasp	Ubiquitin-related	Ubiquitin-like

Domains in the same PDB:

e3phdA1	A:1-102	RING/U-box-like	RING/U-box-like	RING/U-box
e3phdB1	B:1-100	RING/U-box-like	RING/U-box-like	RING/U-box
e3phdC2	C:3-87	RING/U-box-like	RING/U-box-like	RING/U-box
e3phdD2	D:4-87	RING/U-box-like	RING/U-box-like	RING/U-box
e3phdG1	G:5-76	beta-Grasp	Ubiquitin-related	Ubiquitin-like
e3phdH1	H:5-76	beta-Grasp	Ubiquitin-related	Ubiquitin-like

Structural contacts of domain e3phdH1 of H-group "Ubiquitin-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e3phdD2	H:x,y,z->D:X,Y,Z	RING/U-box-like	Interaction Interface Pymol
e3phdD2	H:x,y,z->D:-Y,-X,-Z+1/2	RING/U-box-like	Interaction Interface Pymol