| UID: | 000153780 |
|---|---|
| Type: | Automatic domain |
| Parent: | e1qklA1 |
| Range: | F:69-155 |
| PDB: | 4bbr |
| PDB Description: | DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC 2 |
| UniProt: | P20435 |
| Hsap BLAST neighbor: | P61218 |
| Species: | Saccharomyces cerevisiae |
Structure of domain e4bbrF1
Domains in the same chain:
| e4bbrF1 | F:69-155 | RPB6/omega subunit-like | RPB6/omega subunit-like | RPB6 |
Domains in the same PDB:
Structural contacts of domain e4bbrF1 of H-group "RPB6/omega subunit-like":
The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.
| Domain ID | Symmetry operator | H-group | Visualization |
|---|---|---|---|
| e4bbrA5 | F:x,y,z->A:X,Y,Z | RIFT-related | Interaction Interface Pymol |
| e4bbrA1 | F:x,y,z->A:X,Y,Z | MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase | Interaction Interface Pymol |
| e4bbrA3 | F:x,y,z->A:X,Y,Z | central helical domain in RNA-polymerase beta-prime subunit | Interaction Interface Pymol |
| e4bbrA7 | F:x,y,z->A:X,Y,Z | second helical domain in RNA-polymerase beta-prime subunit | Interaction Interface Pymol |
| e4bbrA2 | F:x,y,z->A:X,Y,Z | third helical domain in yeast RNA-polymerase II beta-prime subunit | Interaction Interface Pymol |
| e4bbrG4 | F:X,Y,Z->G:x,y,z | Flavin-binding protein dodecin-like | Interaction Interface Pymol |
| e4bbrB2 | F:x,y,z->B:X,Y,Z | C-terminal domain in beta subunit of DNA dependent RNA-polymerase | Interaction Interface Pymol |
| e4bbrE1 | F:x,y,z->E:X,Y,Z | RPB5-like RNA polymerase subunit | Interaction Interface Pymol |
