| UID: | 001764997 |
|---|---|
| Type: | Automatic domain |
| Parent: | e3k7aM1 |
| Range: | M:22-79 |
| Ligands: | ZN |
| PDB: | 4bbr |
| PDB Description: | TRANSCRIPTION INITIATION FACTOR IIB |
| UniProt: | P29055 |
| Hsap BLAST neighbor: | Q00403 |
| Species: | Saccharomyces cerevisiae |
Structure of domain e4bbrM2
Domains in the same chain:
| e4bbrM2 | M:22-79 | Rubredoxin-like | Rubredoxin-related | Rubredoxin-related |
| e4bbrM1 | M:80-214 | HTH | HTH | Cyclin-like |
Domains in the same PDB:
Structural contacts of domain e4bbrM2 of H-group "Rubredoxin-related":
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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.
| Domain ID | Symmetry operator | H-group | Visualization |
|---|---|---|---|
| e4bbrA6 | M:x,y,z->A:X,Y,Z | N-terminal domain in RNA-polymerase beta-prime subunit | Interaction Interface Pymol |
| e4bbrA1 | M:x,y,z->A:X,Y,Z | MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase | Interaction Interface Pymol |
| e4bbrB6 | M:x,y,z->B:X,Y,Z | N-terminal domain in beta subunit of DNA dependent RNA-polymerase | Interaction Interface Pymol |
| e4bbrB4 | M:x,y,z->B:X,Y,Z | alpha/beta-Hammerhead/Barrel-sandwich hybrid | Interaction Interface Pymol |
| e4bbrB2 | M:x,y,z->B:X,Y,Z | C-terminal domain in beta subunit of DNA dependent RNA-polymerase | Interaction Interface Pymol |
| e4bbrB4 | M:x,y,z->B:X,-Y,-Z | alpha/beta-Hammerhead/Barrel-sandwich hybrid | Interaction Interface Pymol |
| e4bbrL1 | M:x,y,z->L:X,-Y,-Z | Rubredoxin-related | Interaction Interface Pymol |
| e4bbrC3 | M:x,y,z->C:X,-Y,-Z | Insert subdomain of RNA polymerase alpha subunit | Interaction Interface Pymol |
